View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7961_high_14 (Length: 253)
Name: NF7961_high_14
Description: NF7961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7961_high_14 |
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Alignment Details
Target: chr4 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 242
Target Start/End: Complemental strand, 53050814 - 53050573
Alignment:
| Q |
1 |
gtagtataactctatatctgaaaatgaaaaacattttctcctcaaacactattgaaatccttgtaaacaagggtttccctttctattttctaatctattc |
100 |
Q |
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| T |
53050814 |
gtagtataactctatatctgaaaatgaaaaacattttctcctcaaacactattgaaatccttgtaaacaagggcttccctttctattttctaatctattc |
53050715 |
T |
|
| Q |
101 |
agaatttcacgacagaacagtgtaattcaaggattacgtgattcaatttttataatataatgttatgttatgcgacgaaatatattcatataatgcaatt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
53050714 |
agaatttcacgacagaacagtgtaattcaaggattacgtgattcaatttttataatataatgttatgttatgcgacgaaatatattcatataatgcaatt |
53050615 |
T |
|
| Q |
201 |
atactcattttcaccaatatcggccataacctttgctttctt |
242 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |
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| T |
53050614 |
atactcattttcaccaatatcggccataacctttgctttctt |
53050573 |
T |
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