View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7961_low_18 (Length: 262)
Name: NF7961_low_18
Description: NF7961
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7961_low_18 |
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Alignment Details
Target: chr3 (Bit Score: 239; Significance: 1e-132; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 239; E-Value: 1e-132
Query Start/End: Original strand, 1 - 243
Target Start/End: Original strand, 32725628 - 32725870
Alignment:
| Q |
1 |
tctgcatcggaaaaccagcctccaatgaatcaaaaaccgctgaataatgatgaagtgagtccatgaacctttccacaaacccaccaacaacagaaccaac |
100 |
Q |
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| T |
32725628 |
tctgcatcggaaaaccagcctccaatgaatcaaaaaccgctgaataatgatgaagtgagtccatgaacctttccacaaacccaccaataacagaaccaac |
32725727 |
T |
|
| Q |
101 |
ttcttcttcaaccaacgtcacaagctttggattcaacgtttttgctccgtttaaaaacgaagcaactgattccggtgcacggtaactaaggtgaggtaaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32725728 |
ttcttcttcaaccaacgtcacaagctttggattcaacgtttttgctccgtttaaaaacgaagcaactgattccggtgcacggtaactaaggtgaggtaaa |
32725827 |
T |
|
| Q |
201 |
ttcagcatgcagttgaaaaccaaagcctctccacgtacaagct |
243 |
Q |
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||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32725828 |
ttcagcatgcagttgaaaaccaaagcctctccacgtacaagct |
32725870 |
T |
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