View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7962_high_28 (Length: 307)

Name: NF7962_high_28
Description: NF7962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7962_high_28
NF7962_high_28
[»] chr7 (43 HSPs)
chr7 (203-307)||(36534809-36534913)
chr7 (201-307)||(1085637-1085745)
chr7 (201-307)||(7517609-7517717)
chr7 (194-307)||(14681539-14681652)
chr7 (201-307)||(45433270-45433378)
chr7 (201-306)||(40094795-40094902)
chr7 (218-299)||(23417-23498)
chr7 (218-307)||(11845220-11845309)
chr7 (203-307)||(30244299-30244405)
chr7 (201-307)||(19122760-19122868)
chr7 (218-307)||(22566703-22566791)
chr7 (203-307)||(30245106-30245208)
chr7 (218-307)||(45434665-45434754)
chr7 (194-307)||(6054589-6054704)
chr7 (201-306)||(37533385-37533492)
chr7 (203-307)||(22567062-22567168)
chr7 (203-306)||(24838724-24838830)
chr7 (203-307)||(34218057-34218163)
chr7 (201-305)||(41854665-41854771)
chr7 (217-307)||(7554054-7554144)
chr7 (218-307)||(29157594-29157683)
chr7 (197-307)||(37533028-37533139)
chr7 (203-297)||(30253531-30253623)
chr7 (203-307)||(45754744-45754850)
chr7 (218-307)||(16569225-16569314)
chr7 (218-307)||(16596348-16596437)
chr7 (218-307)||(24177464-24177553)
chr7 (218-290)||(28300293-28300366)
chr7 (201-292)||(30032611-30032704)
chr7 (214-299)||(118337-118422)
chr7 (218-307)||(9901673-9901761)
chr7 (201-294)||(8128462-8128557)
chr7 (218-306)||(36939773-36939861)
chr7 (218-306)||(40230331-40230419)
chr7 (217-307)||(47129124-47129214)
chr7 (263-307)||(30244730-30244774)
chr7 (268-307)||(36109007-36109046)
chr7 (269-307)||(30245523-30245561)
chr7 (269-307)||(30255368-30255406)
chr7 (241-307)||(41910657-41910723)
chr7 (218-307)||(1085288-1085377)
chr7 (258-290)||(28301623-28301655)
chr7 (228-264)||(48071458-48071494)
[»] chr8 (54 HSPs)
chr8 (187-307)||(20870580-20870702)
chr8 (194-304)||(40518103-40518215)
chr8 (203-307)||(45122653-45122759)
chr8 (222-307)||(32305506-32305591)
chr8 (220-307)||(9483229-9483316)
chr8 (218-307)||(147480-147569)
chr8 (201-307)||(3038311-3038419)
chr8 (201-307)||(9482625-9482733)
chr8 (201-299)||(40518619-40518719)
chr8 (197-307)||(70291-70403)
chr8 (201-307)||(3669716-3669824)
chr8 (201-307)||(3670089-3670197)
chr8 (197-299)||(8918781-8918885)
chr8 (201-307)||(33113388-33113496)
chr8 (201-307)||(45122078-45122186)
chr8 (201-307)||(34834905-34835013)
chr8 (201-307)||(34835238-34835346)
chr8 (178-307)||(40579504-40579635)
chr8 (199-307)||(30359638-30359748)
chr8 (201-307)||(25561836-25561945)
chr8 (220-306)||(45121952-45122038)
chr8 (220-301)||(9507817-9507898)
chr8 (218-307)||(30359300-30359389)
chr8 (201-307)||(34835504-34835612)
chr8 (201-307)||(34835770-34835878)
chr8 (227-307)||(43274828-43274908)
chr8 (218-292)||(8794155-8794229)
chr8 (201-305)||(30441112-30441222)
chr8 (206-295)||(4154694-4154783)
chr8 (201-307)||(6876883-6876991)
chr8 (218-299)||(9608782-9608863)
chr8 (201-299)||(9609122-9609222)
chr8 (217-306)||(18372033-18372122)
chr8 (203-299)||(5420688-5420786)
chr8 (201-307)||(9309384-9309491)
chr8 (227-306)||(18380066-18380145)
chr8 (256-307)||(41416249-41416300)
chr8 (228-307)||(45121706-45121785)
chr8 (266-307)||(1014333-1014374)
chr8 (266-307)||(1514003-1514044)
chr8 (266-307)||(18372787-18372828)
chr8 (201-307)||(37544511-37544619)
chr8 (244-292)||(3037774-3037822)
chr8 (259-299)||(33832015-33832055)
chr8 (201-257)||(8919165-8919223)
chr8 (201-253)||(12283955-12284009)
chr8 (217-299)||(27856168-27856250)
chr8 (218-276)||(32640572-32640630)
chr8 (258-307)||(1013951-1014000)
chr8 (201-275)||(5915928-5916004)
chr8 (266-307)||(18372344-18372385)
chr8 (270-307)||(25561736-25561773)
chr8 (267-307)||(18373020-18373060)
chr8 (197-254)||(41129070-41129129)
[»] chr3 (50 HSPs)
chr3 (217-307)||(39914281-39914371)
chr3 (201-307)||(54017837-54017945)
chr3 (201-299)||(12114583-12114683)
chr3 (197-307)||(15772883-15772995)
chr3 (218-307)||(29644942-29645031)
chr3 (201-307)||(54018219-54018327)
chr3 (218-299)||(29644621-29644702)
chr3 (201-307)||(33803273-33803381)
chr3 (201-307)||(37990998-37991106)
chr3 (201-299)||(41359786-41359886)
chr3 (201-307)||(42342409-42342517)
chr3 (158-307)||(35946551-35946702)
chr3 (161-283)||(22303936-22304060)
chr3 (201-307)||(22304598-22304706)
chr3 (201-307)||(32589732-32589840)
chr3 (201-307)||(43346812-43346920)
chr3 (194-307)||(52634705-52634819)
chr3 (220-307)||(39389099-39389186)
chr3 (201-307)||(37990660-37990768)
chr3 (201-307)||(39934976-39935084)
chr3 (218-307)||(44160585-44160673)
chr3 (218-294)||(32462598-32462674)
chr3 (206-295)||(47964544-47964635)
chr3 (217-307)||(8327933-8328023)
chr3 (214-307)||(33362331-33362422)
chr3 (201-291)||(42584845-42584935)
chr3 (217-306)||(45395692-45395781)
chr3 (229-307)||(3384317-3384395)
chr3 (201-284)||(42342111-42342196)
chr3 (222-307)||(4823684-4823769)
chr3 (217-290)||(9240195-9240268)
chr3 (201-307)||(25755423-25755531)
chr3 (218-299)||(49336727-49336808)
chr3 (201-307)||(11661980-11662088)
chr3 (201-294)||(32462921-32463016)
chr3 (201-299)||(21832366-21832464)
chr3 (217-294)||(1634353-1634430)
chr3 (218-307)||(3135113-3135202)
chr3 (217-254)||(25413127-25413164)
chr3 (169-307)||(25739414-25739554)
chr3 (218-307)||(53577393-53577482)
chr3 (203-307)||(50612470-50612581)
chr3 (227-286)||(52634990-52635049)
chr3 (216-282)||(25991457-25991523)
chr3 (217-251)||(47964954-47964988)
chr3 (201-295)||(12749210-12749306)
chr3 (266-307)||(31190046-31190087)
chr3 (206-295)||(39336257-39336346)
chr3 (218-278)||(22303699-22303759)
chr3 (218-294)||(45901756-45901832)
[»] chr5 (48 HSPs)
chr5 (75-155)||(15284804-15284883)
chr5 (218-307)||(25327964-25328053)
chr5 (201-307)||(6500479-6500587)
chr5 (201-299)||(13415781-13415881)
chr5 (201-307)||(18603141-18603249)
chr5 (197-307)||(26074641-26074753)
chr5 (201-307)||(27502057-27502165)
chr5 (204-299)||(41632819-41632916)
chr5 (201-307)||(42405619-42405725)
chr5 (201-307)||(3295366-3295473)
chr5 (218-299)||(9498694-9498775)
chr5 (201-307)||(36492238-36492346)
chr5 (201-292)||(36568590-36568681)
chr5 (201-292)||(34753046-34753139)
chr5 (197-299)||(26590927-26591031)
chr5 (201-307)||(40296336-40296444)
chr5 (201-307)||(41170663-41170771)
chr5 (218-307)||(26074821-26074911)
chr5 (218-307)||(26075201-26075291)
chr5 (218-307)||(6500851-6500940)
chr5 (218-303)||(15370435-15370520)
chr5 (197-307)||(26074163-26074275)
chr5 (201-307)||(32487423-32487530)
chr5 (197-307)||(35150036-35150147)
chr5 (217-293)||(13786040-13786116)
chr5 (194-307)||(33747800-33747915)
chr5 (220-307)||(299518-299605)
chr5 (203-307)||(29549278-29549384)
chr5 (204-307)||(3295039-3295144)
chr5 (201-299)||(1028538-1028638)
chr5 (201-306)||(624226-624333)
chr5 (218-306)||(15370129-15370217)
chr5 (228-307)||(11417027-11417106)
chr5 (197-299)||(38427585-38427688)
chr5 (259-307)||(6224225-6224273)
chr5 (217-292)||(36522276-36522351)
chr5 (197-249)||(38427306-38427360)
chr5 (217-299)||(19275566-19275647)
chr5 (201-294)||(24489227-24489320)
chr5 (227-307)||(12662701-12662781)
chr5 (215-269)||(13042606-13042660)
chr5 (215-269)||(13112604-13112658)
chr5 (229-307)||(41635242-41635320)
chr5 (270-307)||(300988-301025)
chr5 (258-291)||(26074363-26074396)
chr5 (201-307)||(35167859-35167967)
chr5 (206-295)||(36521922-36522013)
chr5 (202-251)||(36527117-36527168)
[»] chr2 (43 HSPs)
chr2 (201-307)||(15511516-15511624)
chr2 (201-307)||(36178626-36178734)
chr2 (204-307)||(15880292-15880397)
chr2 (203-307)||(38796641-38796749)
chr2 (218-307)||(14745707-14745796)
chr2 (201-299)||(42514686-42514786)
chr2 (194-307)||(41283489-41283604)
chr2 (220-307)||(5543040-5543127)
chr2 (203-306)||(5542648-5542753)
chr2 (201-299)||(28254260-28254358)
chr2 (201-293)||(40679650-40679744)
chr2 (204-307)||(36178195-36178300)
chr2 (197-299)||(40163389-40163494)
chr2 (201-299)||(962635-962735)
chr2 (218-306)||(37105954-37106042)
chr2 (201-292)||(36005901-36005994)
chr2 (253-307)||(38796293-38796347)
chr2 (201-307)||(6421414-6421522)
chr2 (201-307)||(6422139-6422247)
chr2 (218-307)||(33731677-33731766)
chr2 (218-307)||(37106217-37106306)
chr2 (203-307)||(40733546-40733652)
chr2 (218-307)||(6713005-6713095)
chr2 (217-307)||(16542478-16542568)
chr2 (217-294)||(28531353-28531430)
chr2 (206-295)||(30323505-30323594)
chr2 (218-307)||(35580764-35580852)
chr2 (218-306)||(14745334-14745422)
chr2 (206-295)||(30313219-30313309)
chr2 (202-274)||(6421793-6421867)
chr2 (229-307)||(36178320-36178398)
chr2 (222-295)||(29874067-29874140)
chr2 (227-307)||(31259665-31259745)
chr2 (203-274)||(6421688-6421761)
chr2 (261-307)||(7598638-7598684)
chr2 (218-295)||(33953811-33953888)
chr2 (201-266)||(3672771-3672838)
chr2 (259-307)||(31899507-31899555)
chr2 (207-283)||(36784287-36784365)
chr2 (267-307)||(1769921-1769961)
chr2 (239-295)||(2336665-2336721)
chr2 (201-282)||(3673122-3673205)
chr2 (197-306)||(12529045-12529156)
[»] chr1 (54 HSPs)
chr1 (201-307)||(31767182-31767290)
chr1 (217-306)||(37850639-37850728)
chr1 (201-307)||(3537620-3537728)
chr1 (201-299)||(5575141-5575239)
chr1 (201-307)||(41142401-41142510)
chr1 (202-291)||(66111-66200)
chr1 (197-307)||(29798228-29798340)
chr1 (218-307)||(32594756-32594845)
chr1 (194-307)||(26661912-26662027)
chr1 (217-307)||(17294606-17294696)
chr1 (218-292)||(44043812-44043886)
chr1 (218-307)||(14318896-14318985)
chr1 (203-305)||(26661545-26661649)
chr1 (201-307)||(34649467-34649575)
chr1 (201-307)||(41157020-41157128)
chr1 (218-307)||(50052063-50052152)
chr1 (194-299)||(39066214-39066321)
chr1 (218-305)||(11977311-11977398)
chr1 (217-307)||(34364954-34365044)
chr1 (201-307)||(44290845-44290954)
chr1 (197-307)||(45084411-45084517)
chr1 (218-307)||(3550749-3550838)
chr1 (201-307)||(41157404-41157512)
chr1 (203-304)||(37556144-37556246)
chr1 (194-307)||(41759512-41759627)
chr1 (217-299)||(22077534-22077616)
chr1 (201-299)||(66493-66593)
chr1 (201-307)||(3875352-3875460)
chr1 (158-307)||(32168676-32168821)
chr1 (222-307)||(44290502-44290587)
chr1 (221-299)||(22077153-22077231)
chr1 (217-307)||(34364536-34364626)
chr1 (217-299)||(44091931-44092013)
chr1 (258-307)||(3537227-3537276)
chr1 (201-307)||(48588509-48588617)
chr1 (217-297)||(10351199-10351279)
chr1 (201-306)||(38804376-38804483)
chr1 (218-304)||(9955940-9956027)
chr1 (203-307)||(37555759-37555864)
chr1 (218-289)||(45839678-45839749)
chr1 (201-292)||(5319986-5320079)
chr1 (218-307)||(5528794-5528883)
chr1 (218-307)||(40082436-40082524)
chr1 (258-307)||(41184505-41184554)
chr1 (217-292)||(24448321-24448396)
chr1 (218-264)||(11977016-11977062)
chr1 (217-251)||(19283494-19283528)
chr1 (220-294)||(22077871-22077944)
chr1 (217-299)||(24600353-24600435)
chr1 (203-307)||(45493997-45494107)
chr1 (217-251)||(47379817-47379851)
chr1 (258-307)||(21378121-21378170)
chr1 (202-299)||(22793315-22793415)
chr1 (247-299)||(30576652-30576704)
[»] chr6 (41 HSPs)
chr6 (201-292)||(16454619-16454712)
chr6 (201-307)||(16454936-16455044)
chr6 (201-307)||(3409288-3409396)
chr6 (201-307)||(29518532-29518640)
chr6 (201-307)||(29518949-29519057)
chr6 (201-307)||(32741208-32741316)
chr6 (197-305)||(1127391-1127501)
chr6 (201-307)||(1846777-1846885)
chr6 (201-307)||(1950206-1950314)
chr6 (201-299)||(10073637-10073737)
chr6 (201-299)||(10074384-10074484)
chr6 (222-305)||(2377785-2377868)
chr6 (202-306)||(3415488-3415594)
chr6 (201-307)||(2378155-2378263)
chr6 (201-307)||(2578464-2578572)
chr6 (201-307)||(2579893-2580001)
chr6 (218-307)||(3058255-3058344)
chr6 (201-307)||(5832048-5832155)
chr6 (218-307)||(6999836-6999925)
chr6 (218-307)||(16107707-16107796)
chr6 (215-307)||(593746-593838)
chr6 (187-292)||(10073998-10074105)
chr6 (227-307)||(35210233-35210313)
chr6 (201-307)||(14748363-14748467)
chr6 (217-295)||(6071173-6071251)
chr6 (228-306)||(32460630-32460708)
chr6 (201-307)||(3409689-3409797)
chr6 (218-307)||(26544078-26544167)
chr6 (176-307)||(5958603-5958732)
chr6 (197-285)||(2579509-2579599)
chr6 (201-292)||(2843598-2843692)
chr6 (218-304)||(10911598-10911684)
chr6 (218-264)||(11637761-11637807)
chr6 (218-307)||(9062390-9062478)
chr6 (201-251)||(12071712-12071764)
chr6 (201-251)||(12085055-12085107)
chr6 (258-307)||(16108092-16108141)
chr6 (197-292)||(2578852-2578949)
chr6 (237-295)||(20848360-20848418)
chr6 (218-295)||(8481967-8482044)
chr6 (258-299)||(14789284-14789325)
[»] scaffold0078 (1 HSPs)
scaffold0078 (218-307)||(5386-5475)
[»] chr4 (65 HSPs)
chr4 (188-307)||(2740729-2740848)
chr4 (201-307)||(1731666-1731774)
chr4 (201-307)||(25483365-25483473)
chr4 (218-307)||(45496834-45496923)
chr4 (201-307)||(54108942-54109049)
chr4 (194-307)||(44620382-44620497)
chr4 (201-307)||(54936225-54936332)
chr4 (204-307)||(50630777-50630882)
chr4 (218-307)||(4955355-4955444)
chr4 (201-307)||(10245949-10246056)
chr4 (201-307)||(39404427-39404535)
chr4 (201-307)||(50002455-50002563)
chr4 (247-307)||(49076515-49076575)
chr4 (218-306)||(49880190-49880278)
chr4 (217-307)||(22183301-22183391)
chr4 (201-288)||(36629285-36629374)
chr4 (201-299)||(54741199-54741297)
chr4 (201-299)||(3340844-3340944)
chr4 (218-307)||(6975494-6975583)
chr4 (217-294)||(22027998-22028075)
chr4 (201-307)||(36608680-36608788)
chr4 (218-307)||(44621031-44621120)
chr4 (201-307)||(54017614-54017722)
chr4 (218-307)||(55933162-55933251)
chr4 (201-290)||(18879852-18879943)
chr4 (201-294)||(22028388-22028483)
chr4 (201-306)||(39404048-39404155)
chr4 (195-307)||(34646662-34646776)
chr4 (201-305)||(50459752-50459858)
chr4 (228-307)||(54017750-54017829)
chr4 (204-307)||(18932771-18932876)
chr4 (201-307)||(54108565-54108674)
chr4 (197-299)||(16889551-16889655)
chr4 (201-307)||(41370386-41370494)
chr4 (215-307)||(52884916-52885009)
chr4 (194-307)||(20825865-20825980)
chr4 (201-302)||(32941142-32941245)
chr4 (201-294)||(34004604-34004698)
chr4 (203-299)||(3244472-3244570)
chr4 (214-285)||(31691203-31691274)
chr4 (201-292)||(39792879-39792972)
chr4 (217-307)||(41707502-41707591)
chr4 (218-304)||(43174539-43174625)
chr4 (218-307)||(52884724-52884814)
chr4 (218-299)||(16888854-16888935)
chr4 (223-299)||(2741108-2741184)
chr4 (204-299)||(44620697-44620793)
chr4 (218-306)||(49302934-49303024)
chr4 (201-307)||(54343027-54343128)
chr4 (217-295)||(28034270-28034348)
chr4 (203-306)||(36572049-36572154)
chr4 (197-291)||(43827485-43827580)
chr4 (201-274)||(19504758-19504833)
chr4 (239-282)||(2891881-2891924)
chr4 (228-307)||(3341157-3341236)
chr4 (268-307)||(4390189-4390228)
chr4 (228-307)||(45489380-45489458)
chr4 (228-282)||(3271841-3271895)
chr4 (217-307)||(48111735-48111825)
chr4 (218-307)||(20826246-20826335)
chr4 (270-307)||(44620325-44620362)
chr4 (270-307)||(44620974-44621011)
chr4 (270-307)||(44621455-44621492)
chr4 (201-282)||(23817700-23817783)
chr4 (215-263)||(34946148-34946196)
[»] scaffold0734 (2 HSPs)
scaffold0734 (203-307)||(5425-5532)
scaffold0734 (243-307)||(5806-5870)
[»] scaffold0702 (2 HSPs)
scaffold0702 (222-305)||(558-641)
scaffold0702 (266-307)||(230-271)
[»] scaffold0391 (2 HSPs)
scaffold0391 (218-307)||(1146-1235)
scaffold0391 (216-289)||(1729-1802)
[»] scaffold0171 (1 HSPs)
scaffold0171 (258-307)||(17536-17585)
[»] scaffold0027 (1 HSPs)
scaffold0027 (197-307)||(47389-47501)
[»] scaffold0504 (1 HSPs)
scaffold0504 (259-292)||(10192-10225)


Alignment Details
Target: chr7 (Bit Score: 77; Significance: 9e-36; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 36534809 - 36534913
Alignment:
Q  203 gaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgtt 302  Q
    ||||||||||||  | ||||||||||||||||||| |||||| |||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  36534809 gaacaaccacacttgtgagagacgccacactcttacccaaaaccttaagactttaggtttatgggtcctcttacttataaggtgttcaacctctactgtt 36534908  T
Q  303 ttatc 307  Q
    |||||    
T  36534909 ttatc 36534913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 1085637 - 1085745
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||||||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||| ||||||||||| |||    
T  1085637 tagaacaaccacacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttac 1085736  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  1085737 tattttatc 1085745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 7517717 - 7517609
Alignment:
Q  201 tagaacaaccacacaagagaga--gacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    ||||||||||||||||| ||||  ||| ||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||    
T  7517717 tagaacaaccacacaagtgagacagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttac 7517618  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  7517617 tcttttatc 7517609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 14681652 - 14681539
Alignment:
Q  194 tcaaggttagaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacc 293  Q
    |||||| ||||||||||||||  | ||||||| ||||||||||| |||||| ||||||||| | ||||||| || ||||||||||| |||||||||||||    
T  14681652 tcaaggctagaacaaccacacttgtgagagacaccacactcttacccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaacc 14681553  T
Q  294 tctactgttttatc 307  Q
    | |||| |||||||    
T  14681552 tttactattttatc 14681539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 45433378 - 45433270
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| ||||||||||||| || |||||||||  || ||||||||||||||||||||||||| |||    
T  45433378 tagaacaaccccacaagcaagagagacaccacactcttacccaaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaacctttac 45433279  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  45433278 tcttttatc 45433270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 40094795 - 40094902
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||||||||||||||| |||||| ||||||||  | ||||||| ||||||||||||||||||||||| ||||| |||    
T  40094795 tagaacaacctcacaagcaagagagacgccacactcttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttac 40094894  T
Q  299 tgttttat 306  Q
    | ||||||    
T  40094895 tcttttat 40094902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 23417 - 23498
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    |||||||| ||||||||||| |||||| |||||| || ||||||||| ||||||||||||||||||||||||||||| ||||    
T  23417 agagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttact 23498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 11845309 - 11845220
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| |||||||||||||||||| |||||| || | | ||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  11845309 agagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattttatc 11845220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 30244405 - 30244299
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||||||||||||||  |||||||| ||||||||||| |||||| |||||| || | |||||||  ||||||||||||||||||| |||||||| ||||     
T  30244405 gaacaaccacacaagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactc 30244306  T
Q  301 ttttatc 307  Q
    |||||||    
T  30244305 ttttatc 30244299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 19122868 - 19122760
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  ||| |||| ||||||||||| |||||| |||||| || | | |||||  |||||||||||||||||||||||||||| |||    
T  19122868 tagaacaaccacacaagcaagatagacaccacactcttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacctttac 19122769  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  19122768 tattttatc 19122760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 22566703 - 22566791
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  22566703 agagagac-ccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatc 22566791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 30245208 - 30245106
Alignment:
Q  203 gaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgtt 302  Q
    |||||||||||||||||||| ||  |||||||||| |||||| |||||| || |  |||||| |||| |||||||||||||||||||||||| |||| ||    
T  30245208 gaacaaccacacaagagagacac--cacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactctt 30245111  T
Q  303 ttatc 307  Q
    |||||    
T  30245110 ttatc 30245106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 45434754 - 45434665
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||  |||||||||| |||||| |||||| || || |||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  45434754 agagagacatcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttacttttttatc 45434665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 6054704 - 6054589
Alignment:
Q  194 tcaaggttagaacaaccacacaaga--gagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||| ||||||||||| |||||   ||||||| ||||||||||| |||||| |||||| || |  |||||| ||||||||||||||||||||||||||    
T  6054704 tcaaggctagaacaaccatacaagtaggagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaa 6054605  T
Q  292 cctctactgttttatc 307  Q
    | | |||| |||||||    
T  6054604 catttactattttatc 6054589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 37533385 - 37533492
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  | |||||| ||||||||||| |||||| |||||| || | | ||||| ||||||||||||||||||||||||||||| |||    
T  37533385 tagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttac 37533484  T
Q  299 tgttttat 306  Q
    | ||||||    
T  37533485 tattttat 37533492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 22567062 - 22567168
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||||||| ||||||  |||||||| ||||||||||| | |||| |||||| || |  |||||| ||||||||||||||||||||||||||||| ||||     
T  22567062 gaacaaccccacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactc 22567161  T
Q  301 ttttatc 307  Q
    |||||||    
T  22567162 ttttatc 22567168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 24838724 - 24838830
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcct-cttacttataaggtgttcaacctctact 299  Q
    |||||||||||||||  ||||||||| |||||||||| |||||| |||||||||   ||||||| | |||| ||||||||||||||||||||||| ||||    
T  24838724 gaacaaccacacaagcaagagagacgtcacactcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaacctttact 24838823  T
Q  300 gttttat 306  Q
     ||||||    
T  24838824 cttttat 24838830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 34218057 - 34218163
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    ||||||||| |||||  |||||||| ||||||||||| |||||| ||||||||| | |||||||  ||||||| |||||||||||||||||| | ||||     
T  34218057 gaacaaccatacaagcgagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttactt 34218156  T
Q  301 ttttatc 307  Q
    |||||||    
T  34218157 ttttatc 34218163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 41854771 - 41854665
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  ||| ||||| |||||||||| |||||| |||||| |||||  |||||||||| |||| ||||||||||||||||||| |||    
T  41854771 tagaacaaccgcacaagtaagaaagacgtcacactcttacccaaaaccttaaggcattatatttataggtcatcttgcttataaggtgttcaacctttac 41854672  T
Q  299 tgtttta 305  Q
    | |||||    
T  41854671 tctttta 41854665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 7554144 - 7554054
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| ||||||||||| |||||| |||||| |  | ||||||| | ||||||||||||||||||||||||||| |||| |||||||    
T  7554144 gagagagacaccacactcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatc 7554054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 29157683 - 29157594
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| |||||| |||||| || | | ||||| |||| |||||||||||||||||||||||| |||| |||||||    
T  29157683 agagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatc 29157594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 37533028 - 37533139
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||||| | ||||||  |||||||| ||||||| ||| |||||| |||||| || |  |||||| |||||||||||||||||||||||||||||    
T  37533028 aggttagaacaagcgcacaagcaagagagacaccacact-ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacct 37533126  T
Q  295 ctactgttttatc 307  Q
     |||| |||||||    
T  37533127 ttactattttatc 37533139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 297
Target Start/End: Complemental strand, 30253623 - 30253531
Alignment:
Q  203 gaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctcta 297  Q
    |||||||||||||||||||| ||  |||||||||| |||||| |||||| || |  |||||| ||| |||||||||||||||| |||||||||||    
T  30253623 gaacaaccacacaagagagacac--cacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaacctcta 30253531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 45754850 - 45754744
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||||||||||||||  |||||||| ||||||||||| |||||| |||||| |  | |||||||  ||| |||||||||||||||||||||| | ||||     
T  45754850 gaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttacta 45754751  T
Q  301 ttttatc 307  Q
    |||||||    
T  45754750 ttttatc 45754744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 16569314 - 16569225
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| || |||||||| | |||| |||||| || | ||||||| |||||||||||||||||||| |||||||| ||||||| ||||    
T  16569314 agagagacaccgcactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatc 16569225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 16596348 - 16596437
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| || |||||||| | |||| |||||| || | ||||||| |||||||||||||||||||| |||||||| ||||||| ||||    
T  16596348 agagagacaccgcactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatc 16596437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 24177553 - 24177464
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||||||| | ||||  ||||| || | ||||||| ||||| ||||||||||||||||||| ||| |||| |||||||    
T  24177553 agagagacgccacactcttaccaaaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttttatc 24177464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 28300293 - 28300366
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttat-aggtcctcttacttataaggtgttca 290  Q
    |||||||||||||||||||| ||||||||||||| || | |||||||  ||| |||||||||||||||||||||    
T  28300293 agagagacgccacactcttacccaaaatcttaaggcaatgggtttatggggttctcttacttataaggtgttca 28300366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 30032704 - 30032611
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    |||||||||| ||||||  ||||||| | |||||||||| |||||| |||||| |  ||||||||| | | |||||||||||||||||||||||    
T  30032704 tagaacaaccgcacaagcaagagagatgtcacactcttacccaaaaccttaaggctataggtttatggatactcttacttataaggtgttcaac 30032611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 214 - 299
Target Start/End: Original strand, 118337 - 118422
Alignment:
Q  214 caagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||| |||||||||||||||| |||||| |||| |  | | ||||||| | ||||||||||||| ||||||||||||| ||||    
T  118337 caagagatagacgccacactcttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaacctttact 118422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 9901761 - 9901673
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| |||||| ||||||||| |  |||||| | ||||| ||| |||||| |||||||||| ||||||||||||    
T  9901761 agagagacaccacactcttacccaaaaccttaagacaatgagtttatggatcctc-tacgtataagatgttcaacctttactgttttatc 9901673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 294
Target Start/End: Original strand, 8128462 - 8128557
Alignment:
Q  201 tagaacaaccacacaagagagag--acgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    ||||||||||||| ||| |||||  || ||||||||||| |||||| ||||||    | ||||||| ||||||||||| |||||||||||||||||    
T  8128462 tagaacaaccacataagcgagagtgacaccacactcttaaccaaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaacct 8128557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 36939773 - 36939861
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    ||||| || ||||||| ||| |||||| |||||| || | | ||||| ||||||||||||||||||||||||||| | |||| ||||||    
T  36939773 agagaaacaccacacttttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttactattttat 36939861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 40230331 - 40230419
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    |||||||| ||| ||| ||| |||||| ||||||||  | ||||||| |||||||||||||||||| |||||||| | |||| ||||||    
T  40230331 agagagacaccagacttttacccaaaaccttaagactatgggtttatgggtcctcttacttataagatgttcaacttttacttttttat 40230419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 47129214 - 47129124
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| |||||||| || |||||| |||||  |  | ||||||| ||||||||||||||||||  ||||||||| |||| |||||||    
T  47129214 gagagagacaccacactcctacccaaaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaacctttactattttatc 47129124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 263 - 307
Target Start/End: Complemental strand, 30244774 - 30244730
Alignment:
Q  263 ataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||    
T  30244774 ataggtcctcttatttataaggtgttcaacctttactcttttatc 30244730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 307
Target Start/End: Original strand, 36109007 - 36109046
Alignment:
Q  268 tcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  36109007 tcctcttacttataaggtgttcaacctttactcttttatc 36109046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 30245561 - 30245523
Alignment:
Q  269 cctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  30245561 cctcttacttataaggtgttcaacctttactcttttatc 30245523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 307
Target Start/End: Complemental strand, 30255406 - 30255368
Alignment:
Q  269 cctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||||||||||||| |||| |||||||    
T  30255406 cctcttacttataaggtgttcaacctttactcttttatc 30255368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 307
Target Start/End: Original strand, 41910657 - 41910723
Alignment:
Q  241 aaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||| || | ||||||| |||||||| | ||||||||| |||||||| |||| |||||||    
T  41910657 aaaatcttaagccaatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatc 41910723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 1085288 - 1085377
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||| || ||||||||||| |||||| |||||| || |  |||||| ||| ||||||||||| || |||||||| | |||| |||||||    
T  1085288 agagaaacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatc 1085377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 258 - 290
Target Start/End: Original strand, 28301623 - 28301655
Alignment:
Q  258 ggtttataggtcctcttacttataaggtgttca 290  Q
    ||||||| |||||||||||||||||||||||||    
T  28301623 ggtttatgggtcctcttacttataaggtgttca 28301655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 48071494 - 48071458
Alignment:
Q  228 cacactcttatccaaaatcttaagacattaggtttat 264  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  48071494 cacactcttatccaaaaccttaagacaataggtttat 48071458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 4e-35; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 187 - 307
Target Start/End: Original strand, 20870580 - 20870702
Alignment:
Q  187 gtccatgtcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataagg 284  Q
    |||||| ||||||||||||||||||||||||  |||||||| ||||||||||||||||||||||||| || | ||||||| ||||||||||||||||||     
T  20870580 gtccatatcaaggttagaacaaccacacaagcaagagagacaccacactcttatccaaaatcttaaggcagtgggtttatgggtcctcttacttataaga 20870679  T
Q  285 tgttcaacctctactgttttatc 307  Q
    |||||||||| |||| |||||||    
T  20870680 tgttcaacctttactattttatc 20870702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 194 - 304
Target Start/End: Complemental strand, 40518215 - 40518103
Alignment:
Q  194 tcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||| |||||||||||||||||  |||||||||||||||||||| |||||| |||||| |||| ||||||| |||||  |||||||||||||||||||    
T  40518215 tcaaggctagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaa 40518116  T
Q  292 cctctactgtttt 304  Q
    ||| |||| ||||    
T  40518115 cctttactttttt 40518103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 45122759 - 45122653
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||||||||||||||  ||||||||||||||||| || |||||| ||||||||| |  |||||| ||||||||||||||||||||||||||||| ||||     
T  45122759 gaacaaccacacaagcaagagagacgccacactcatacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttacta 45122660  T
Q  301 ttttatc 307  Q
    |||||||    
T  45122659 ttttatc 45122653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 32305591 - 32305506
Alignment:
Q  222 agacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||||||||||||  | | |||||||||||| |||||||||||||||||||||||| |||| |||||||    
T  32305591 agacgccacactcttatccaaaatcttaaggtaatgggtttataggtcttcttacttataaggtgttcaacctttactattttatc 32305506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 220 - 307
Target Start/End: Original strand, 9483229 - 9483316
Alignment:
Q  220 agagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||| ||||||||||| |||||| ||||||||| | ||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  9483229 agagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatc 9483316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 147569 - 147480
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||||||| ||||||  ||||| || ||||||||| |||||||||| |||||||||||||||||| |||| |||||||    
T  147569 agagagacgccacactcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaacctttactcttttatc 147480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 3038311 - 3038419
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  ||||||| |||||||||||| |||||| |||||| || | ||||||| |||||| |||||||||| ||||||||||| |||    
T  3038311 tagaacaaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttac 3038410  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  3038411 tattttatc 3038419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 9482625 - 9482733
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||  |||||||||||| ||||||||| || || | ||||||| ||||||||||||||||||||||||||||| |||    
T  9482625 tagaacaaccgcacaagcaagagagataccacactcttatacaaaatctttaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttac 9482724  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  9482725 tcttttatc 9482733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 40518719 - 40518619
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||| |||| |||||||||| |||||| |||||| |||| ||||||| |||||||||| |||||||||||||||||| |||    
T  40518719 tagaacaaccacacaagcaagagtgacgtcacactcttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttac 40518620  T
Q  299 t 299  Q
    |    
T  40518619 t 40518619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 70291 - 70403
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||||||||||||||  ||| ||||| |||||||||| | |||| |||||| || | ||||||| |||||||||||||||||| |||||||| |    
T  70291 aggttagaacaaccacacaagcaagatagacgtcacactcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacat 70390  T
Q  295 ctactgttttatc 307  Q
     |||| |||||||    
T  70391 ttactcttttatc 70403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 3669824 - 3669716
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| |||||| || |  ||||||  |||||||||||||||||||||||||||| |||    
T  3669824 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttac 3669725  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  3669724 tattttatc 3669716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 3670197 - 3670089
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| ||||||  | ||||||||| ||||||| ||||||||||||||| ||||| |||    
T  3670197 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggtgttaaacctttac 3670098  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  3670097 tattttatc 3670089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 8918781 - 8918885
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||| |||||||||||| |  ||| ||||| |||||||||| |||||| |||||| || ||||||||| ||||||||||||||||| |||||||||||    
T  8918781 aggttaaaacaaccacacacgcaagaaagacgtcacactcttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacct 8918880  T
Q  295 ctact 299  Q
     ||||    
T  8918881 ttact 8918885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 33113388 - 33113496
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||| ||  |||||||| ||||||||||| ||||||||||||| || |  |||||| ||||||||||||||||||  ||||||||| |||    
T  33113388 tagaacaaccacactagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttac 33113487  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  33113488 tattttatc 33113496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 45122078 - 45122186
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| ||||||| | |  |||||| ||| ||||||||||||||||||||||||| |||    
T  45122078 tagaacaaccccacaagtaagagagacaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttac 45122177  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  45122178 tattttatc 45122186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 34835013 - 34834905
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||| |||||| || |  ||||||  ||| |||||||||||||||||| ||||| |||    
T  34835013 tagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttac 34834914  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  34834913 tattttatc 34834905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 34835346 - 34835238
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    ||||| |||||||||||  |||| ||| ||||||||||| ||||||  ||||| || |  |||||| ||||||||||||||||||||||||||||| |||    
T  34835346 tagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttac 34835247  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  34835246 tattttatc 34835238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 178 - 307
Target Start/End: Original strand, 40579504 - 40579635
Alignment:
Q  178 tggaggatagtccatgtcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctctta 275  Q
    |||||||| |||||  || ||| ||||||||||  |||||  | |||||| ||||||||||| | |||| |||||  || || |||||| ||||||||||    
T  40579504 tggaggatcgtccacatcgaggatagaacaaccgtacaagcaatagagacaccacactcttacctaaaaccttaaagcaataagtttatgggtcctctta 40579603  T
Q  276 cttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||| |||| |||||||    
T  40579604 cttataaggtgttcaacctttactattttatc 40579635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 199 - 307
Target Start/End: Complemental strand, 30359748 - 30359638
Alignment:
Q  199 gttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctct 296  Q
    |||||||||||| || |||  |||||||| ||||||||||| |||||||||||||    | |||||||  |||||||||||||||||||||||||| | |    
T  30359748 gttagaacaaccgcataagtaagagagacaccacactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaactttt 30359649  T
Q  297 actgttttatc 307  Q
    ||| |||||||    
T  30359648 actcttttatc 30359638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 25561836 - 25561945
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatcc-aaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctcta 297  Q
    |||| ||||||||||||  ||||||| | |||||||||| || |||| ||||||||| |  |||||| ||||||||||||||||||||||||||| | ||    
T  25561836 tagagcaaccacacaagcaagagagatgtcacactcttaccccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgttta 25561935  T
Q  298 ctgttttatc 307  Q
    || |||||||    
T  25561936 ctcttttatc 25561945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 220 - 306
Target Start/End: Original strand, 45121952 - 45122038
Alignment:
Q  220 agagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    |||||||||||||| ||| ||||||||||||| || |  ||||||  |||||||||||||||| ||||||||||| |||| ||||||    
T  45121952 agagacgccacactgttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttat 45122038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 220 - 301
Target Start/End: Complemental strand, 9507898 - 9507817
Alignment:
Q  220 agagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgt 301  Q
    |||||||||||||||||| |||||| ||||||  | | |||||||  ||||||||||||||||||| |||||||| ||||||    
T  9507898 agagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaacctttactgt 9507817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 30359389 - 30359300
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| |||||| |||||| |  | ||||||| ||||||||| ||||||||||||||||| | |||| |||||||    
T  30359389 agagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatc 30359300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 34835612 - 34835504
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    ||||| |||||||||||  |||| ||| ||||||||||| ||||||  ||||| || |  |||||| ||||||||||||||||||||||| ||||| |||    
T  34835612 tagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttac 34835513  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  34835512 tattttatc 34835504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 34835878 - 34835770
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    ||||| |||||||||||  |||| ||| ||||||||||| ||||||  ||||| || |  |||||| ||||||||||||||||||||||| ||||| |||    
T  34835878 tagaataaccacacaagcaagagtgacaccacactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacctttac 34835779  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  34835778 tattttatc 34835770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 43274828 - 43274908
Alignment:
Q  227 ccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||  ||||| ||||||||| ||||||||| |||||||||||||||||  | |||||||| |||| |||||||    
T  43274828 ccacactcttactcaaaaccttaagacaataggtttatgggtcctcttacttataatatattcaacctttactcttttatc 43274908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 292
Target Start/End: Complemental strand, 8794229 - 8794155
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    |||||||| || |||||| | |||||| ||||||| |||||||||||  ||||||||||||||||| ||||||||    
T  8794229 agagagacaccgcactctcacccaaaaccttaagatattaggtttatgagtcctcttacttataagatgttcaac 8794155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 30441222 - 30441112
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttactta----taaggtgttcaacct 294  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| |||||| || | ||||||| || |||||||||||    |||||||||||||||    
T  30441222 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacct 30441123  T
Q  295 ctactgtttta 305  Q
     |||| |||||    
T  30441122 ttactatttta 30441112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 4154694 - 4154783
Alignment:
Q  206 caaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    |||||||||||| ||||||||||||||||||| |||||| |||  | || |  |||||| |||||| | |||||||| ||||||||||||    
T  4154694 caaccacacaagcgagagacgccacactcttacccaaaaccttggggcaatgagtttatgggtcctttcacttataaagtgttcaacctc 4154783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 6876883 - 6876991
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    ||||||||||||||||   ||||| || ||||||||||| |||||| | ||||||| |  || ||| |||| ||||| |||||||||||||||||| |||    
T  6876883 tagaacaaccacacaaacaagagaaacaccacactcttacccaaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttac 6876982  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  6876983 ttttttatc 6876991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Complemental strand, 9608863 - 9608782
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||||||||||| || |||||| ||||||    | ||||||| |||| |||||||||||||||||||||||| ||||    
T  9608863 agagagacgccacactcatacccaaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacctttact 9608782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 9609222 - 9609122
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||| ||  |||||||||||||||||||| | ||||  ||||| |  | ||||||| |||| ||||||||||||| |||||||||| |||    
T  9609222 tagaacaaccacactagcaagagagacgccacactcttaccgaaaacattaaggcgatgggtttatgggtcatcttacttataagatgttcaacctttac 9609123  T
Q  299 t 299  Q
    |    
T  9609122 t 9609122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 18372033 - 18372122
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    |||||| || ||||||||||| |||||| |||||  || |  |||||| | ||||||||||||||||||||||||||| |||| ||||||    
T  18372033 gagagaaacaccacactcttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaacctttactattttat 18372122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 299
Target Start/End: Complemental strand, 5420786 - 5420688
Alignment:
Q  203 gaacaaccacacaagagag--agacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||||||||| |||  ||||| ||||||||||   |||| |||||| || | |||||||  ||||||||||||||||| |||||||||| ||||    
T  5420786 gaacaaccacacaagtgagggagacgtcacactcttacaaaaaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttact 5420688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 9309491 - 9309384
Alignment:
Q  201 tagaacaaccacacaa-gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||||||| |  ||||||||| ||||||||||| || | | |||||| || |  |||||  ||||||||||||||||||||||||||| | ||||    
T  9309491 tagaacaaccacatactgagagagacaccacactcttacccgacaccttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttact 9309392  T
Q  300 gttttatc 307  Q
     |||||||    
T  9309391 cttttatc 9309384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 227 - 306
Target Start/End: Original strand, 18380066 - 18380145
Alignment:
Q  227 ccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    |||||||||||  ||||| ||||||  | | |||||||||| || ||||||||||||||||||||||| |||| ||||||    
T  18380066 ccacactcttactcaaaaccttaaggtagtgggtttataggcccccttacttataaggtgttcaacctttactattttat 18380145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 256 - 307
Target Start/End: Original strand, 41416249 - 41416300
Alignment:
Q  256 taggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| | ||||||||||||||||||||||||||| |||| |||||||    
T  41416249 taggtttatggatcctcttacttataaggtgttcaacctttactattttatc 41416300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 45121706 - 45121785
Alignment:
Q  228 cacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||  ||||| |||||| |  ||||||||| | ||||||||||||||||||| ||||||| |||| |||||||    
T  45121706 cacactcttactcaaaaccttaaggctgtaggtttatggatcctcttacttataaggtgatcaacctttactcttttatc 45121785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 1014333 - 1014374
Alignment:
Q  266 ggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  1014333 ggtcctcttacttataaggtgttcaacctttactattttatc 1014374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 1514003 - 1514044
Alignment:
Q  266 ggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  1514003 ggtcctcttacttataaggtgttcaacctttactcttttatc 1514044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 18372787 - 18372828
Alignment:
Q  266 ggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  18372787 ggtcctcttacttataaggtgttcaacctttactattttatc 18372828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 37544511 - 37544619
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  ||| |||| ||||||||||| |||||| |||||   | | | ||||| ||||||||| ||||||| ||||||||||| |||    
T  37544511 tagaacaaccgcacaagtaagaaagacaccacactcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgtgttcaacctttac 37544610  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  37544611 tattttatc 37544619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 292
Target Start/End: Original strand, 3037774 - 3037822
Alignment:
Q  244 atcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    ||||||||||| | |||||||  ||||||||||||||||||||||||||    
T  3037774 atcttaagacaatgggtttatgagtcctcttacttataaggtgttcaac 3037822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 299
Target Start/End: Complemental strand, 33832055 - 33832015
Alignment:
Q  259 gtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  33832055 gtttataggtcctcttacttataaagtgttcaacttctact 33832015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 257
Target Start/End: Original strand, 8919165 - 8919223
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacatta 257  Q
    |||||||||||||||||  | |||||| |||||||||||||||||| |||||| |||||    
T  8919165 tagaacaaccacacaagcaaaagagacaccacactcttatccaaaaccttaaggcatta 8919223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 253
Target Start/End: Complemental strand, 12284009 - 12283955
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagac 253  Q
    |||||||||||||||||  |||||||| | |||||||||||||||| ||||||||    
T  12284009 tagaacaaccacacaagtgagagagacactacactcttatccaaaaccttaagac 12283955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 27856250 - 27856168
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||| | ||||| ||||||||||||||||| || | |||||||  |||||||  ||||||  ||| ||||||||||||    
T  27856250 gagagagacacaacacttttatccaaaatcttaaggcagtgggtttatgagtcctctatcttatattgtgctcaacctctact 27856168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 276
Target Start/End: Original strand, 32640572 - 32640630
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttac 276  Q
    |||||||||| ||||||||| |||||| |||||| || | ||||||| |||||||||||    
T  32640572 agagagacgcaacactcttacccaaaaccttaaggcaatgggtttatcggtcctcttac 32640630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 1013951 - 1014000
Alignment:
Q  258 ggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||| |||||||||||||||| |||||||||| | |||| |||||||    
T  1013951 ggtttattggtcctcttacttatagggtgttcaacttttactattttatc 1014000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 275
Target Start/End: Complemental strand, 5916004 - 5915928
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctctta 275  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| |||||| || |  |||||| ||||||||||    
T  5916004 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctta 5915928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 18372344 - 18372385
Alignment:
Q  266 ggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||| |||||||||||||||||||||||| |||| |||||||    
T  18372344 ggtcttcttacttataaggtgttcaacctttactattttatc 18372385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Original strand, 25561736 - 25561773
Alignment:
Q  270 ctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  25561736 ctcttacttataaggtgttcaacctttactcttttatc 25561773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 307
Target Start/End: Original strand, 18373020 - 18373060
Alignment:
Q  267 gtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| |||||||||||||||||| |||| |||||||    
T  18373020 gtcctcttatttataaggtgttcaacctttactattttatc 18373060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 254
Target Start/End: Complemental strand, 41129129 - 41129070
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagaca 254  Q
    ||||| |||||||||||||||  |||||||| |||||||| || |||||| |||||||||    
T  41129129 aggtttgaacaaccacacaagtaagagagacaccacactcatacccaaaaccttaagaca 41129070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 71; Significance: 4e-32; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 39914371 - 39914281
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| ||||||||||||||||||| ||||| |||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  39914371 gagagagacaccacactcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttcaacctctactgttttatc 39914281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 54017837 - 54017945
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||| |||||| | ||||||||||  |||||||||||||||||||||||||||| |||    
T  54017837 tagaacaaccacacaagtaagagagacaccacactcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaacctttac 54017936  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  54017937 tcttttatc 54017945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 12114583 - 12114683
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| ||||||||| | ||||||| ||||||||||||||||||||||||||||| |||    
T  12114583 tagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttac 12114682  T
Q  299 t 299  Q
    |    
T  12114683 t 12114683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 307
Target Start/End: Complemental strand, 15772995 - 15772883
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||||||||||||||  |||||||| |||||||||||||||||| |||||  || |  |||||| ||||||||||||||||||||||||||| |    
T  15772995 aggttagaacaaccacacaagcaagagagacaccacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacat 15772896  T
Q  295 ctactgttttatc 307  Q
     |||| |||||||    
T  15772895 ttactcttttatc 15772883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 29644942 - 29645031
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||||||| |||||| ||||||||| | ||||||| ||||||||||||||||||||||| ||||| |||| |||||||    
T  29644942 agagagacgccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttttatc 29645031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 54018219 - 54018327
Alignment:
Q  201 tagaacaaccacacaaga--gagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||   ||||||| ||||||||||| |||||| |||||| | |||||||||| |||||||||||||||||||||||||| || |||    
T  54018219 tagaacaaccacacaagcatgagagacaccacactcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataaggtgttcaatctttac 54018318  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  54018319 tcttttatc 54018327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 29644621 - 29644702
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    |||||||||||||||||||| |||||| ||||||||| | ||||||| ||| ||||||||||||||||||||||||| ||||    
T  29644621 agagagacgccacactcttacccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttact 29644702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 33803273 - 33803381
Alignment:
Q  201 tagaacaaccacacaagagag--agacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||||||  |||||||||||||||| |||| | |||||  || | ||||||| |||||||||||||||| |||||||||||| |||    
T  33803273 tagaacaaccacacaagagagggagacgccacactcttacccaataccttaatgcaatgggtttatgggtcctcttacttatatggtgttcaacctttac 33803372  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  33803373 tattttatc 33803381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 37990998 - 37991106
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    ||||||||||||| |||  |||||||| ||||||||||| |||||| |||||| |  |  |||||||||||||||||||||||||||||||||||| |||    
T  37990998 tagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttac 37991097  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  37991098 tattttatc 37991106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 41359786 - 41359886
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||||||||| ||||| |||||| |||||| || | ||||||| |||||||||||||||||||| |||||||| |||    
T  41359786 tagaacaaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttac 41359885  T
Q  299 t 299  Q
    |    
T  41359886 t 41359886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 42342409 - 42342517
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  ||||||||| |||||||||| |||||| ||||||||| | | ||||| ||||||||||||||||||||||| ||||| |||    
T  42342409 tagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttac 42342508  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  42342509 tcttttatc 42342517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 158 - 307
Target Start/End: Complemental strand, 35946702 - 35946551
Alignment:
Q  158 ttgggtcactcggggagccttggaggatagtccatgtcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacat 255  Q
    |||||||||| ||||||| |||| |||  |||||  || ||| ||||||||   ||||||  |||||||| ||||||| ||| |||||| |||||| ||     
T  35946702 ttgggtcactgggggagctttgggggaccgtccacatcgaggctagaacaattgcacaagcaagagagacaccacacttttacccaaaaccttaaggcaa 35946603  T
Q  256 taggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
      ||||||| ||||||||||||||||||||||||||||| ||||||||||||    
T  35946602 cgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatc 35946551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 161 - 283
Target Start/End: Original strand, 22303936 - 22304060
Alignment:
Q  161 ggtcactcggggagccttggaggatagtccatgtcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattag 258  Q
    ||||||| |||||||||||| ||| | ||||  || ||| |||||||||||| ||||  |||||||| |||||||||||||||||| |||||| || | |    
T  22303936 ggtcactgggggagccttgggggacaatccacatcgaggctagaacaaccactcaagcaagagagacaccacactcttatccaaaaccttaaggcaatgg 22304035  T
Q  259 gtttataggtcctcttacttataag 283  Q
    |||||| ||||| ||||||||||||    
T  22304036 gtttatgggtccgcttacttataag 22304060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 22304706 - 22304598
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| |||||| || |  |||||| |||||||||||||||||||| |||||||| |||    
T  22304706 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttac 22304607  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  22304606 tattttatc 22304598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 32589840 - 32589732
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  ||||||||  | |||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| ||     
T  32589840 tagaacaaccacacaagcaagagagacatcgcactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttat 32589741  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  32589740 tattttatc 32589732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 43346812 - 43346920
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| |||||| || |  |||||| ||| ||||||||||||||||||||||||| |||    
T  43346812 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttac 43346911  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  43346912 tattttatc 43346920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 52634819 - 52634705
Alignment:
Q  194 tcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||| |||||||||  ||||||  ||||||||| |||||||||| |||||| |||||| || | ||||||| |||| |||||||||||||| ||||||    
T  52634819 tcaaggctagaacaactgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgggtttatgggtc-tcttacttataaggcgttcaa 52634721  T
Q  292 cctctactgttttatc 307  Q
    ||| ||||||||||||    
T  52634720 cctttactgttttatc 52634705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 220 - 307
Target Start/End: Complemental strand, 39389186 - 39389099
Alignment:
Q  220 agagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||| ||||||||||| |||||| ||||||||| | ||||||| |||||||||| || ||||||||||||||| |||| |||||||    
T  39389186 agagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatc 39389099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 37990660 - 37990768
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||| ||||||||  |||||||| ||||||||||| |||||| |||||| || |  ||||||  |||||||||||||||||||||||||| | |||    
T  37990660 tagaacaatcacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttac 37990759  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  37990760 tattttatc 37990768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 39934976 - 39935084
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  ||||||||  ||||||||||  |||||  ||||| || | ||||||| | ||||||||||||||||||||||||||| |||    
T  39934976 tagaacaaccacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttac 39935075  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  39935076 tcttttatc 39935084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 44160585 - 44160673
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||| ||||| |||||| ||||||||| | ||||||| | |||||||| |||||||||||||||||| || |||||||||    
T  44160585 agagagacgccacattctta-ccaaaaccttaagacaatgggtttatggatcctcttatttataaggtgttcaacctttattgttttatc 44160673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 294
Target Start/End: Original strand, 32462598 - 32462674
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||| |||||||||||||||||| |||||  || ||||||||| | || ||||||||||||||||||||||||    
T  32462598 agagagaccccacactcttatccaaaaccttaaagcaataggtttatggatcatcttacttataaggtgttcaacct 32462674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 47964544 - 47964635
Alignment:
Q  206 caaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    ||||||||||||  |||||||||||||||||||| |||||| |||||| || ||||||||| |||||||| |||||||  | ||||||||||    
T  47964544 caaccacacaagtgagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaacctc 47964635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 8328023 - 8327933
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| ||||||||||| |||||| |||||| ||||| |||||| ||| |||||||||||||| | |||| ||| |||| |||||||    
T  8328023 gagagagacaccacactcttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatc 8327933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 214 - 307
Target Start/End: Original strand, 33362331 - 33362422
Alignment:
Q  214 caagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||  || |||||||||||||  | | ||||||| |||||||||||||||||||| |||||||| || | |||||||    
T  33362331 caagagagagacgccacact--tacccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaacctttattattttatc 33362422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 291
Target Start/End: Original strand, 42584845 - 42584935
Alignment:
Q  201 tagaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||||||| || |||  |||||| ||||||||||   ||||||||||||||| | ||||||| | ||||||||||||||||||||||||    
T  42584845 tagaacaaccgcataagtaagagacaccacactctttctcaaaatcttaagacaattggtttatggatcctcttacttataaggtgttcaa 42584935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 45395692 - 45395781
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    ||||||||| ||||||||||| ||||||  |||||||| | ||||||| | ||||||||||||||| ||||| ||||| |||| ||||||    
T  45395692 gagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaacctttactcttttat 45395781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 307
Target Start/End: Original strand, 3384317 - 3384395
Alignment:
Q  229 acactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| ||||||  ||||| ||||| |||||| ||||||||| ||||||| ||||| ||||| ||||||||||||    
T  3384317 acactcttacccaaaactttaaggcattaagtttatgggtcctcttccttataaagtgtttaacctatactgttttatc 3384395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 284
Target Start/End: Original strand, 42342111 - 42342196
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataagg 284  Q
    |||||||||| ||||||  |||||||||||||||||||| |||||| |||||| || |  ||||||  ||||||||||||||||||    
T  42342111 tagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataagg 42342196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 307
Target Start/End: Complemental strand, 4823769 - 4823684
Alignment:
Q  222 agacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||| ||||||||||| ||||||||||||| || |  |||||| ||||||| ||||||||||||||| ||| | |||| |||||||    
T  4823769 agacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatc 4823684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 217 - 290
Target Start/End: Complemental strand, 9240268 - 9240195
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttca 290  Q
    ||||||||| ||||| |||||||| ||||||||||  | | | ||||| |||||||||||||||||||||||||    
T  9240268 gagagagacaccacattcttatccgaaatcttaaggtaatggatttatgggtcctcttacttataaggtgttca 9240195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 25755531 - 25755423
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||||||||||| ||| ||| ||  ||| |||| | | |||||  ||||||||||||||||||| |||||||| |||    
T  25755531 tagaacaaccgcacaagcaagagagacgccacacttttacccacaactttaggacaatggatttatgagtcctcttacttataaggtattcaacctttac 25755432  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  25755431 tcttttatc 25755423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 49336727 - 49336808
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    |||||||| ||||||||||| ||| ||  |||||||  | ||||||| ||||||||||||||||||||| ||||||| ||||    
T  49336727 agagagacaccacactcttacccagaactttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttact 49336808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 11662088 - 11661980
Alignment:
Q  201 tagaacaaccacacaa-gagagagacgccacactcttatccaaaatc-ttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||| ||||||||| || |||||||| |||||| | ||||| || | |||||||  | ||||| |||| ||||||||||||||| |||    
T  11662088 tagaacaaccacacaatgagagagacacctcactcttacccaaaaaccttaaggcaattggtttatgaggcctctcacttttaaggtgttcaacctttac 11661989  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  11661988 tcttttatc 11661980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 294
Target Start/End: Original strand, 32462921 - 32463016
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||| ||||||  |||||||| |||||||||||  ||||| |||||| || | |||||||  ||| ||||||||||||||| ||||||||    
T  32462921 tagaacaaccgcacaagcaagagagacaccacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaacct 32463016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 21832366 - 21832464
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    ||||||||||| |||||  |||||||||||||  ||||| |||||| |||||| |  |  ||||||  |||||||||||||||||||||||||||| |||    
T  21832366 tagaacaaccagacaagcaagagagacgccac--tcttacccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttac 21832463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 1634353 - 1634430
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    ||||||||  || |||||||| |||||| |||||| || | ||||||| ||||||||||||||||| ||||| |||||    
T  1634353 gagagagataccgcactcttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaacct 1634430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 3135113 - 3135202
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| |||||||||||  ||||| |||| | || | ||||||| ||| || |||||||||||||||||||| | |||| |||||||    
T  3135113 agagagacaccacactcttactcaaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaacatttactattttatc 3135202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 254
Target Start/End: Complemental strand, 25413164 - 25413127
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagaca 254  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  25413164 gagagagacaccacactcttatccaaaatcttaagaca 25413127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 169 - 307
Target Start/End: Original strand, 25739414 - 25739554
Alignment:
Q  169 ggggagccttggaggatagtccatgtcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttatag 266  Q
    |||||||||||| |||  |||||  || ||| |||||| ||| ||||||  ||||||||| |||||||||| |||||| || ||  || |  |||||| |    
T  25739414 ggggagccttgggggaccgtccacatcgaggctagaactaccgcacaagctagagagacgtcacactcttacccaaaacctaaaagcaatgagtttatgg 25739513  T
Q  267 gtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||| | |||||||| | |||| |||||||    
T  25739514 gtcctcttacttatatgatgttcaacttttactattttatc 25739554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 53577482 - 53577393
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| |||| | |||||| || || |||||| | ||| |||| || |||| |||||||||| ||||||||||||    
T  53577482 agagagacaccacactcttacccaagaccttaaggcaatatgtttatggatccacttatttttaagatgttcaacctttactgttttatc 53577393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 50612470 - 50612581
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagaca-----ttaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    |||||||||| ||||  ||||||||  |||||||||| |||||| ||||||| |     |||| |||||  ||||||||||||||||||||||||| ||     
T  50612470 gaacaaccactcaagcaagagagacatcacactcttacccaaaaccttaagataatatgttagatttatgagtcctcttacttataaggtgttcaatctt 50612569  T
Q  296 tactgttttatc 307  Q
    |||| |||||||    
T  50612570 tactattttatc 50612581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 227 - 286
Target Start/End: Complemental strand, 52635049 - 52634990
Alignment:
Q  227 ccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtg 286  Q
    ||||||||||| ||||||||||||| || |  |||||| |||||||||| ||||||||||    
T  52635049 ccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttatttataaggtg 52634990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Complemental strand, 25991523 - 25991457
Alignment:
Q  216 agagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataa 282  Q
    |||||||||  ||||||| | | |||||| |||||| |||||||||||||||| |||| ||||||||    
T  25991523 agagagagagaccacactttaacccaaaaccttaaggcattaggtttataggttctctcacttataa 25991457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 47964954 - 47964988
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaag 251  Q
    ||||||||||||||||||||| |||||||||||||    
T  47964954 gagagagacgccacactcttacccaaaatcttaag 47964988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 295
Target Start/End: Complemental strand, 12749306 - 12749210
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    ||||||||||||| |||  |||| ||  ||||||||||||| |||| |||||  || | ||||||| |||||||  |||||||| ||||||||||||    
T  12749306 tagaacaaccacataagtaagagtgagtccacactcttatcaaaaaccttaatgcaattggtttatgggtcctcacacttataaagtgttcaacctc 12749210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 266 - 307
Target Start/End: Complemental strand, 31190087 - 31190046
Alignment:
Q  266 ggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| |||||||||||||||||||| |||| |||||||    
T  31190087 ggtcctctaacttataaggtgttcaacctttactcttttatc 31190046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 39336257 - 39336346
Alignment:
Q  206 caaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    ||||||||| || |||||| || ||||| |||||||||| |||||  || |  |||||| | |||||| |||||||| ||||||||||||    
T  39336257 caaccacacgagcgagagaggcaacactattatccaaaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaacctc 39336346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 278
Target Start/End: Original strand, 22303699 - 22303759
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttactt 278  Q
    ||||| || ||||||||||| |||||| |||||| || | ||||||| |||||||||||||    
T  22303699 agagaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 294
Target Start/End: Complemental strand, 45901832 - 45901756
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||| ||||||||||| | ||||  ||||| |  |  ||||||  ||||||||||||||||||||||||||||    
T  45901832 agagagacaccacactcttaccaaaaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacct 45901756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 6e-31; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 15284804 - 15284883
Alignment:
Q  75 ataaaaaatacaacacaatcttaatagaaattgaaatactactacttccttaaaatcaaaatccccattgaatgatgcttc 155  Q
    |||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15284804 ataaaaaatataa-acaatcttaatagaaattgaaatactactacttccttaaaatcaaaatccccattgaatgatgcttc 15284883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 25328053 - 25327964
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| |||||| |||||| |||||||||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  25328053 agagagacaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacttttactgttttatc 25327964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 6500587 - 6500479
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| |||||| || | |||||| |||||||||||||||||||||||||||||| |||    
T  6500587 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttac 6500488  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  6500487 tattttatc 6500479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 13415781 - 13415881
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||||||||||||||| |||||| ||||||  | ||||||||| ||||||||||||||||||||||||||||| |||    
T  13415781 tagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaacctttac 13415880  T
Q  299 t 299  Q
    |    
T  13415881 t 13415881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 18603141 - 18603249
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||| ||||||||||  ||||||| |||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||    
T  18603141 tagaactaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttac 18603240  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  18603241 tattttatc 18603249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 197 - 307
Target Start/End: Complemental strand, 26074753 - 26074641
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||| ||||||||| ||  |||||||| ||||||||||| |||||| |||||| || | ||||||| |||||||||||||||||||||||||||||    
T  26074753 aggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 26074654  T
Q  295 ctactgttttatc 307  Q
     |||| |||||||    
T  26074653 ttactcttttatc 26074641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 27502057 - 27502165
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||| ||||||| ||| | ||||||||||| || ||||||||| ||||||||||||||||||||||| ||||| |||    
T  27502057 tagaacaaccacacaagcaagagagacaccacacttttaccaaaaatcttaaggcaataggtttatgggtcctcttacttataaggtgtttaacctttac 27502156  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  27502157 tattttatc 27502165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 204 - 299
Target Start/End: Complemental strand, 41632916 - 41632819
Alignment:
Q  204 aacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||| ||||||  |||||||| ||||||||||| ||||||||||||  |||| ||||||| ||||||||||||||||||||||||||||| ||||    
T  41632916 aacaaccgcacaagcaagagagacaccacactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttact 41632819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 42405619 - 42405725
Alignment:
Q  201 tagaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||||||||| ||||||  |||||| ||||||||||| |||||| |||||| ||||||||||||  ||||| |||||| ||||||||||||||| ||||     
T  42405619 tagaacaaccgcacaagcaagagacaccacactcttacccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaacctttacta 42405718  T
Q  301 ttttatc 307  Q
    |||||||    
T  42405719 ttttatc 42405725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 3295366 - 3295473
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  ||||||||  |||||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||    
T  3295366 tagaacaaccacacaagcaagagagacaacacactctta-ccaaaaccttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttac 3295464  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  3295465 tattttatc 3295473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 9498694 - 9498775
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    |||||||| ||||||||||| ||||||||||||| || | ||||||| ||||||||||||||||||||||||||||| ||||    
T  9498694 agagagacaccacactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttact 9498775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 36492238 - 36492346
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||| |||||||||||||||||| || |||  | |  |||||| ||||||||||||||||||||||||||||| |||    
T  36492238 tagaacaaccacacaagcaagagagacaccacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttacttataaggtgttcaacctttac 36492337  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  36492338 tcttttatc 36492346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 36568590 - 36568681
Alignment:
Q  201 tagaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    ||||||||||||||||||||||||||||||||||||| | |||| |||||| || | ||||||  |||| ||| ||||||||||||||||||    
T  36568590 tagaacaaccacacaagagagagacgccacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaac 36568681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 34753046 - 34753139
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    |||||||||| ||||||  |||||||||||||||||||| |||||| |||||| || | ||||||| |||| ||||||||||||||||||||||    
T  34753046 tagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaac 34753139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 26590927 - 26591031
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||||||||||| ||  ||||||||||||||||||||  ||||| |||||| ||||   ||||| | |||||||||||||||||||||||||||    
T  26590927 aggttagaacaaccacactagtgagagagacgccacactcttactcaaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaacct 26591026  T
Q  295 ctact 299  Q
     ||||    
T  26591027 ttact 26591031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 40296336 - 40296444
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| || ||| || | ||||||| ||||||||||||||||||||||||||||| | |    
T  40296336 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttc 40296435  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  40296436 tattttatc 40296444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 41170771 - 41170663
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  ||| | || ||||||||||| |||||| |||||| || | ||||||| |||||||||||||||||| |||||||||| |||    
T  41170771 tagaacaaccacacaagcaagaaaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttac 41170672  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  41170671 tattttatc 41170663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 26074821 - 26074911
Alignment:
Q  218 agagagacgccacactctt-atccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||| | |||||| ||||||||| ||||||||| ||||||| ||||||||  ||||||||||| |||| |||||||    
T  26074821 agagagacgccacactctttacccaaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaacctttactcttttatc 26074911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 26075201 - 26075291
Alignment:
Q  218 agagagacgccacactctt-atccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| ||||||||| | |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  26075201 agagagacgacacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatc 26075291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 6500940 - 6500851
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| |||||||||||||||||| |||||| || |  |||||| |||||| ||| |||||||||||||||||| |||| |||||||    
T  6500940 agagagacaccacactcttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactattttatc 6500851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 303
Target Start/End: Complemental strand, 15370520 - 15370435
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttt 303  Q
    ||||||||||||||||||||  ||||| |||||| |  | ||||||| ||||||||||||||||||||||||||| | ||||||||    
T  15370520 agagagacgccacactcttacgcaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacatttactgttt 15370435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 307
Target Start/End: Original strand, 26074163 - 26074275
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||| ||||||||| ||  |||||||| ||||||||||| |||||| |||||| || | |||| || ||||||||||| ||| |||||||||||||    
T  26074163 aggttagagcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacct 26074262  T
Q  295 ctactgttttatc 307  Q
     |||| |||||||    
T  26074263 ttacttttttatc 26074275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 32487530 - 32487423
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    ||||||||||||| |||  ||||| ||| |||||||||| |||||| |||||| || | ||||||| ||||||||||||||| ||||||||||||| |||    
T  32487530 tagaacaaccacataagcaagagatacgtcacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttat-aggtgttcaacctttac 32487432  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  32487431 tattttatc 32487423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 197 - 307
Target Start/End: Complemental strand, 35150147 - 35150036
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||||||||||| ||  |||||||| ||||||| ||| |||||| ||||||||| | | ||||| |||| ||||||||||||||||||||||||    
T  35150147 aggttagaacaaccacactagtgagagagacaccacacttttacccaaaaccttaagacaatggatttatgggtc-tcttacttataaggtgttcaacct 35150049  T
Q  295 ctactgttttatc 307  Q
      ||| |||||||    
T  35150048 tgactcttttatc 35150036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 217 - 293
Target Start/End: Original strand, 13786040 - 13786116
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacc 293  Q
    |||||||||  ||||||||||||||||||||||||||| ||| ||||  |||| |||||||||||| ||||||||||    
T  13786040 gagagagacatcacactcttatccaaaatcttaagacaatagatttacgggtcatcttacttataaagtgttcaacc 13786116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 33747915 - 33747800
Alignment:
Q  194 tcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||| |||||||||| || |||  |||||||| ||||||||||||||||||||||||| || |  |||||| | ||||||||||||||| || || ||    
T  33747915 tcaaggctagaacaaccgcataaggaagagagacaccacactcttatccaaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaa 33747816  T
Q  292 cctctactgttttatc 307  Q
    ||| |||| |||||||    
T  33747815 cctttactattttatc 33747800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 220 - 307
Target Start/End: Complemental strand, 299605 - 299518
Alignment:
Q  220 agagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||  ||||| |||||| |  |  |||||| |||| |||||||||||||||||||||||| ||||||||||||    
T  299605 agagacgccacactcttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacctttactgttttatc 299518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 29549278 - 29549384
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    ||||||||||| |||  ||||||||||||||||||||||||||| ||||||  | |  |||||| |||| ||||||||||| |||||||| ||| ||||     
T  29549278 gaacaaccacataagcaagagagacgccacactcttatccaaaaccttaaggtaatgtgtttatgggtcttcttacttatatggtgttcatcctttacta 29549377  T
Q  301 ttttatc 307  Q
    |||||||    
T  29549378 ttttatc 29549384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 3295039 - 3295144
Alignment:
Q  204 aacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgt 301  Q
    |||||||||||||   |||||||| |||||||| || |||||| || ||| || | ||||||| |||| |||||||||||||||||||||||| |||| |    
T  3295039 aacaaccacacaaccaagagagacaccacactcatacccaaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttcaacctttactat 3295138  T
Q  302 tttatc 307  Q
    ||||||    
T  3295139 tttatc 3295144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 1028538 - 1028638
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||||||||||||||| | |||| ||||||    ||||||||| ||||||||||||||||| ||||||| ||| |||    
T  1028538 tagaacaaccgcacaagtgagagagacgccacactcttaccaaaaaccttaaggttataggtttatgggtcctcttacttataaagtgttcatcctttac 1028637  T
Q  299 t 299  Q
    |    
T  1028638 t 1028638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 624333 - 624226
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| || ||| |  | ||||||| |||| |||||||||||| ||||||||||| |||    
T  624333 tagaacaaccccacaagtgagagagacaccacactcttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgtgttcaacctttac 624234  T
Q  299 tgttttat 306  Q
    | ||||||    
T  624233 tattttat 624226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 15370217 - 15370129
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    |||||||| ||||||||||| |||||| |||||| |  | | ||||| |||||||||||||||||| |||||||||| |||| ||||||    
T  15370217 agagagacaccacactcttacccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaacctttactattttat 15370129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 11417027 - 11417106
Alignment:
Q  228 cacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||  ||||| |||||| || | ||||||| | ||||||||||||||||||||||||||| |||| |||||||    
T  11417027 cacactcttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatc 11417106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 197 - 299
Target Start/End: Complemental strand, 38427688 - 38427585
Alignment:
Q  197 aggttagaacaaccacacaa--gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||||||| |||||  |||||||||| ||||||||||  ||||| ||||||||| | | || || ||||||| |||||||||| ||||||||||    
T  38427688 aggttagaacaaccgcacaagtgagagagacgtcacactcttacacaaaaccttaagacaatggattaatgggtcctc-tacttataagatgttcaacct 38427590  T
Q  295 ctact 299  Q
     ||||    
T  38427589 ttact 38427585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 6224273 - 6224225
Alignment:
Q  259 gtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  6224273 gtttatgggtcctcttacttataaggtgttcaacctttactcttttatc 6224225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 217 - 292
Target Start/End: Original strand, 36522276 - 36522351
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    ||||||||| ||||||||||| |||||| ||||||| | | ||||||| |||||||| ||||||||  ||||||||    
T  36522276 gagagagacaccacactcttacccaaaaccttaagataatgggtttattggtcctctcacttataaaatgttcaac 36522351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 249
Target Start/End: Complemental strand, 38427360 - 38427306
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatctta 249  Q
    |||||||||||||| ||||||  |||||||||||||||||||| |||||||||||    
T  38427360 aggttagaacaaccgcacaagcaagagagacgccacactcttacccaaaatctta 38427306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 19275647 - 19275566
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    |||| |||||||||| ||||| |||||||||||||||| |   ||||| |||| |||| ||||||| ||||||||||||||||    
T  19275647 gagacagacgccacaatcttacccaaaatcttaagacaatgaatttatgggtcttcttccttataa-gtgttcaacctctact 19275566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 294
Target Start/End: Original strand, 24489227 - 24489320
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||| ||||||  | ||||||||||||||||||  |||||||||||| || | ||||||| |||  ||||||| |||||||||| |||||    
T  24489227 tagaacaaccgcacaagtaaaagagacgccacactcttacgcaaaatcttaaggcaatgggtttatgggt--tcttactaataaggtgtttaacct 24489320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 12662701 - 12662781
Alignment:
Q  227 ccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||| |||||| ||||||||| | | ||||| |||  ||||||||||||  |||||||||| |||| |||||||    
T  12662701 ccacactcttacccaaaaacttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatc 12662781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 13042660 - 13042606
Alignment:
Q  215 aagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtc 269  Q
    ||||||||||| |||||||||||||||||| |||||| || | ||||||| ||||    
T  13042660 aagagagagacaccacactcttatccaaaaccttaaggcaatgggtttatgggtc 13042606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 269
Target Start/End: Complemental strand, 13112658 - 13112604
Alignment:
Q  215 aagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtc 269  Q
    |||||| |||| |||||||||||||||||| ||||||||| | ||||||| ||||    
T  13112658 aagagaaagacaccacactcttatccaaaaccttaagacaatgggtttatgggtc 13112604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 229 - 307
Target Start/End: Original strand, 41635242 - 41635320
Alignment:
Q  229 acactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| | ||||| |||||||| | | ||||| | |||||||| |||||||||||||||| | |||| |||||||    
T  41635242 acactcttacctaaaattttaagacaatggatttatggatcctcttatttataaggtgttcaacatttactcttttatc 41635320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 301025 - 300988
Alignment:
Q  270 ctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||| |||||||| ||||||||||||    
T  301025 ctcttacttataaggtattcaacctttactgttttatc 300988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 291
Target Start/End: Complemental strand, 26074396 - 26074363
Alignment:
Q  258 ggtttataggtcctcttacttataaggtgttcaa 291  Q
    ||||||| ||||||||||||||||||||||||||    
T  26074396 ggtttatgggtcctcttacttataaggtgttcaa 26074363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 35167859 - 35167967
Alignment:
Q  201 tagaacaaccacacaagag--agagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||| || |  ||||||  |||||||||| | ||||  | ||| || ||| ||||| |||| || ||||||||||||||||||||| |||    
T  35167859 tagaacaaccacactagtgtgagagacatcacactcttaccaaaaacatcaaggcaatagatttatgggtcatcctacttataaggtgttcaacctttac 35167958  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  35167959 tcttttatc 35167967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 206 - 295
Target Start/End: Original strand, 36521922 - 36522013
Alignment:
Q  206 caaccacacaa--gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    |||||||||||  |||||||| | |||||||||| |||||| |||||| || | ||||||| |||||||| | ||| |  ||||||||||||    
T  36521922 caaccacacaaatgagagagatgacacactcttacccaaaaccttaaggcaattggtttatgggtcctctcatttaaagagtgttcaacctc 36522013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 36527117 - 36527168
Alignment:
Q  202 agaacaaccacacaag--agagagacgccacactcttatccaaaatcttaag 251  Q
    |||||| |||||||||  ||||||||  ||||||||||||||||||||||||    
T  36527117 agaacagccacacaagtgagagagacagcacactcttatccaaaatcttaag 36527168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 66; Significance: 3e-29; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 15511516 - 15511624
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||||||||||||| | ||||||| ||||||||||||||||| ||||||||||| |||    
T  15511516 tagaacaaccacacaagcaagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttac 15511615  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  15511616 tcttttatc 15511624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 36178626 - 36178734
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||    
T  36178626 tagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttac 36178725  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  36178726 tattttatc 36178734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 204 - 307
Target Start/End: Complemental strand, 15880397 - 15880292
Alignment:
Q  204 aacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgt 301  Q
    ||||||| ||||||  |||||||||||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||| |    
T  15880397 aacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactct 15880298  T
Q  302 tttatc 307  Q
    ||||||    
T  15880297 tttatc 15880292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 38796641 - 38796749
Alignment:
Q  203 gaacaaccacacaag--agagagacgccaca--ctcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||  | ||||||||||||  |||||| |||||| |||||| |||||||||||| ||||||||||||||||||||||||||||| ||     
T  38796641 gaacaaccacacaagcaatagagacgccacatactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacctttat 38796740  T
Q  299 tgttttatc 307  Q
    |||||||||    
T  38796741 tgttttatc 38796749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 14745707 - 14745796
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  14745707 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatc 14745796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 42514786 - 42514686
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||||||||||||||| ||||||||||||| |  | ||||||| ||||||||||||||||||||||||||||| |||    
T  42514786 tagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttac 42514687  T
Q  299 t 299  Q
    |    
T  42514686 t 42514686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 41283489 - 41283604
Alignment:
Q  194 tcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||| ||||||||||||||||   |||||||||||||||||||| | |||| |||||| || |  |||||| ||||||||||||||||||||||||||    
T  41283489 tcaaggctagaacaaccacacaaacaagagagacgccacactcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaa 41283588  T
Q  292 cctctactgttttatc 307  Q
    ||| |||| |||||||    
T  41283589 cctttactattttatc 41283604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 220 - 307
Target Start/End: Original strand, 5543040 - 5543127
Alignment:
Q  220 agagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||| ||||||||||| ||||||||||||| || ||||||||| | ||||||||||||||||||||||||||| |||| |||||||    
T  5543040 agagacaccacactcttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattttatc 5543127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 5542648 - 5542753
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||||||| ||||||  |||||||| ||||||||||| | |||| |||||| || ||||||||| ||||||||||||||||||||||||||||| ||||     
T  5542648 gaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttacta 5542747  T
Q  301 ttttat 306  Q
    ||||||    
T  5542748 ttttat 5542753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 28254260 - 28254358
Alignment:
Q  201 tagaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    |||||||||| |||||||||||||| ||||||||||| |||||| |||||| || |  |||||| |||||||||||||||||| |||||||||| ||||    
T  28254260 tagaacaaccccacaagagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttact 28254358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 293
Target Start/End: Original strand, 40679650 - 40679744
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacc 293  Q
    |||||||||| ||||||  |||||||||||||||||||| ||||||||||||| |  | ||||||| ||| ||||||||||||||||||||||||    
T  40679650 tagaacaaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacc 40679744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 36178195 - 36178300
Alignment:
Q  204 aacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgt 301  Q
    ||||||||||||||  |||||| | ||||||||||| ||||||||||||| || | ||||||| ||| | ||||||||||||||||||||||| |||| |    
T  36178195 aacaaccacacaagcaagagaggcaccacactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaacctttactat 36178294  T
Q  302 tttatc 307  Q
    ||||||    
T  36178295 tttatc 36178300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 40163389 - 40163494
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaa-gacattaggtttataggtcctcttacttataaggtgttcaacc 293  Q
    |||||||||||||||||||||  |||||||| ||||||| ||| |||||| ||||| |||| |||||| || |||| |||||||||||||||||||||||    
T  40163389 aggttagaacaaccacacaagcaagagagacaccacacttttacccaaaaccttaaagacactaggttaatgggtcatcttacttataaggtgttcaacc 40163488  T
Q  294 tctact 299  Q
    | ||||    
T  40163489 tttact 40163494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 962735 - 962635
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||| |||  |||||||||| |||||| ||||||||| | ||||||| |||||||| |||||||||||||||||||| |||    
T  962735 tagaacaaccacacaagcaagagtgacaacacactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttac 962636  T
Q  299 t 299  Q
    |    
T  962635 t 962635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 37106042 - 37105954
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    |||||||| ||||||||||| ||||||||||||| || |  |||||| ||||| ||||||||||||||||||||||| |||| ||||||    
T  37106042 agagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattttat 37105954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 36005901 - 36005994
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    |||||||||| ||||||  |||||||||||||||| ||| |||||| |||||| || |  |||||| |||||||||||||||||||||||||||    
T  36005901 tagaacaaccccacaagcaagagagacgccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaac 36005994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 253 - 307
Target Start/End: Original strand, 38796293 - 38796347
Alignment:
Q  253 cattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  38796293 cattaggtttataggtcctcttacttataaggtgttcaacatttactgttttatc 38796347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 6421522 - 6421414
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| || ||| || |  ||||||  |||||||||||||||||||||||||||| |||    
T  6421522 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttac 6421423  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  6421422 tcttttatc 6421414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 6422247 - 6422139
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||| ||||||||||| | |||| |||||| |  | ||||||| |||||||||| |||||| ||||||||||| |||    
T  6422247 tagaacaaccacacaagcaagagagacaccacactcttacctaaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaacctttac 6422148  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  6422147 ttttttatc 6422139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 33731766 - 33731677
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||| ||||||| |||||| |||||| || ||||||||| | ||||||||||||||||||| ||||||| |||| |||||||    
T  33731766 agagagacaccatactcttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttttatc 33731677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 37106306 - 37106217
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||| || ||||||||||| |||||| ||||||  | | ||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  37106306 agagaaacaccacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatc 37106217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 40733652 - 40733546
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||| ||||||||||  |||||||| ||||||||||| ||||||  |||||    ||||||||| ||||||||||||||||||||||||||| | ||||     
T  40733652 gaactaccacacaagcgagagagacaccacactcttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggtgttcaacatttactt 40733553  T
Q  301 ttttatc 307  Q
    |||||||    
T  40733552 ttttatc 40733546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 6713095 - 6713005
Alignment:
Q  218 agagagacgccacactcttatccaaaatc-ttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||  |||||||||| |||||| | ||||  || ||||||||| ||||||||||||||||||||||||||| | ||||||||||||    
T  6713095 agagagacatcacactcttacccaaaaaccttaaagcaataggtttatgggtcctcttacttataaggtgttcaacatttactgttttatc 6713005  T

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Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 16542568 - 16542478
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| || |||||||||  |||||||||||| || |  ||||||| ||||||||| |||||||||||||||||| |||| |||||||    
T  16542568 gagagagatgctacactcttactcaaaatcttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatc 16542478  T

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Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 28531353 - 28531430
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    ||||||| | ||||||||||| ||||||||||||| || |  |||||| || ||||||||||||||||||||||||||    
T  28531353 gagagagtcaccacactcttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaacct 28531430  T

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Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 30323594 - 30323505
Alignment:
Q  206 caaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    |||| ||||||  ||||||||||||||||||| |||||| |||||| || |  ||||||||||||||| |||| ||| ||||||||||||    
T  30323594 caacaacacaaatgagagacgccacactcttacccaaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacctc 30323505  T

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Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 35580764 - 35580852
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||| |||||||| |||||| |||||| || | ||||||| |||||||| |||||||||||||||||| | || |||||||||    
T  35580764 agagagacgccgcactcttacccaaaaccttaaggcaatgggtttat-ggtcctctcacttataaggtgttcaacatttattgttttatc 35580852  T

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Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Original strand, 14745334 - 14745422
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    |||||||||||||||||||| |||||| |||||| || | ||||||| ||||||| |||||| ||| |||||||||  |||| ||||||    
T  14745334 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttat 14745422  T

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Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 295
Target Start/End: Complemental strand, 30313309 - 30313219
Alignment:
Q  206 caaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||| || |  |||| | |||||||| |||||||| ||||||||||||    
T  30313309 caaccacacaagtgagagagacgccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttataa-gtgttcaacctc 30313219  T

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Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 202 - 274
Target Start/End: Complemental strand, 6421867 - 6421793
Alignment:
Q  202 agaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctctt 274  Q
    ||||||||||||||||  |||||||| ||||||||||| |||||| |||||| || ||||||||| |||||||||    
T  6421867 agaacaaccacacaagttagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctctt 6421793  T

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Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 229 - 307
Target Start/End: Original strand, 36178320 - 36178398
Alignment:
Q  229 acactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| |||||| ||||||||| | |||||||  |||| |||||||||||||||||| |||| |||| |||||||    
T  36178320 acactcttacccaaaaccttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatc 36178398  T

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Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 295
Target Start/End: Original strand, 29874067 - 29874140
Alignment:
Q  222 agacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    ||||||||||||||||||||||| |||||| || | ||||||| |||||||  | |||||| ||||||||||||    
T  29874067 agacgccacactcttatccaaaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaacctc 29874140  T

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Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 227 - 307
Target Start/End: Original strand, 31259665 - 31259745
Alignment:
Q  227 ccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||| |||||| ||||||    ||||||||| |||| |||||||||||||||||| ||||| |||| |||||||    
T  31259665 ccacactcttacccaaaaccttaaggtgataggtttatgggtcatcttacttataaggtgttgaacctttactcttttatc 31259745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 274
Target Start/End: Complemental strand, 6421761 - 6421688
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctctt 274  Q
    |||||||||||||||  |||||||| ||||||||||| |||||| ||| || || ||||||||| |||||||||    
T  6421761 gaacaaccacacaagttagagagacaccacactcttacccaaaacctttagtcaataggtttatgggtcctctt 6421688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 307
Target Start/End: Complemental strand, 7598684 - 7598638
Alignment:
Q  261 ttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||| ||||||||||||||||||||||||||||| |||| |||||||    
T  7598684 ttatgggtcctcttacttataaggtgttcaacctttacttttttatc 7598638  T

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Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 295
Target Start/End: Original strand, 33953811 - 33953888
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    |||| |||| |||||||||| ||||||| ||||| ||  |||||||| |||||||| |||||||  ||||||||||||    
T  33953811 agagggacgtcacactcttacccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaacctc 33953888  T

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Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 266
Target Start/End: Complemental strand, 3672838 - 3672771
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttatag 266  Q
    ||||||||||||||||   |||||||| ||||||||||| ||||||||||||| || | |||||||||    
T  3672838 tagaacaaccacacaattaagagagacaccacactcttacccaaaatcttaaggcaatgggtttatag 3672771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 31899507 - 31899555
Alignment:
Q  259 gtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||| ||||||||||||||||||||||||||| | |||| |||||||    
T  31899507 gtttatgggtcctcttacttataaggtgttcaacatttactattttatc 31899555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 207 - 283
Target Start/End: Original strand, 36784287 - 36784365
Alignment:
Q  207 aaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataag 283  Q
    |||||||||||  |||||||| | ||||| |||||||||| |||||||||   ||||||| |||| |||||||||||||    
T  36784287 aaccacacaagcaagagagacacaacacttttatccaaaaccttaagacaaagggtttatgggtcatcttacttataag 36784365  T

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Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 267 - 307
Target Start/End: Complemental strand, 1769961 - 1769921
Alignment:
Q  267 gtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||||||||||||| | |||| |||||||    
T  1769961 gtcctcttacttataaggtgttcaacttttactcttttatc 1769921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 239 - 295
Target Start/End: Complemental strand, 2336721 - 2336665
Alignment:
Q  239 ccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    ||||||||||||| ||||   ||||| |||||||| |||||||| ||||||||||||    
T  2336721 ccaaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctc 2336665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 282
Target Start/End: Complemental strand, 3673205 - 3673122
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataa 282  Q
    |||||||||||||| ||  ||||||||  |||||||||| ||||||||||||  || |  |||||| | |||||||||||||||    
T  3673205 tagaacaaccacactagtaagagagacatcacactcttagccaaaatcttaaagcaatgagtttatggatcctcttacttataa 3673122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 197 - 306
Target Start/End: Original strand, 12529045 - 12529156
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||||||| |||||   |||||||| | ||  ||||||| ||||  ||||| || |  ||||||  ||||||||||||||| ||||||||| ||    
T  12529045 aggttagaacaaccgcacaaacaagagagacactacgttcttatctaaaactttaaggcaatgagtttatgagtcctcttacttatacggtgttcaatct 12529144  T
Q  295 ctactgttttat 306  Q
     |||||||||||    
T  12529145 ttactgttttat 12529156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 31767182 - 31767290
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  ||| ||||| |||||||||| |||||| |||||| ||||||||| || ||||||||||||||||||||||||||||| |||    
T  31767182 tagaacaaccacacaagcaagatagacgtcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttac 31767281  T
Q  299 tgttttatc 307  Q
    |||||||||    
T  31767282 tgttttatc 31767290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 217 - 306
Target Start/End: Original strand, 37850639 - 37850728
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    ||||||||| |||||||||||||| ||| ||||| ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||    
T  37850639 gagagagacaccacactcttatccgaaaccttaaaacattaggtttatgggttctcttacttataaggtgttcaacctctactgttttat 37850728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 3537620 - 3537728
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||||||||||||||| |||||| |||||| || | |||||||||||||||||||| |||||||||||||||| |||    
T  3537620 tagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttac 3537719  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  3537720 tattttatc 3537728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 5575239 - 5575141
Alignment:
Q  201 tagaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    |||||| ||| || |||||||||||||||||||||||||||||| |||||  |  | | ||||||||||||||||||||||||||||||||||| ||||    
T  5575239 tagaactacctcataagagagagacgccacactcttatccaaaaccttaaagctatggatttataggtcctcttacttataaggtgttcaacctttact 5575141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 41142510 - 41142401
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatc-ttaagacattaggtttataggtcctcttacttataaggtgttcaacctcta 297  Q
    |||||||||||||||||  |||||||||||||||||||  |||||| | ||||| || | ||||||| |||||| |||||||||||||||||||||| ||    
T  41142510 tagaacaaccacacaagcaagagagacgccacactctttaccaaaaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaaccttta 41142411  T
Q  298 ctgttttatc 307  Q
    ||||||||||    
T  41142410 ctgttttatc 41142401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 202 - 291
Target Start/End: Original strand, 66111 - 66200
Alignment:
Q  202 agaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||||||| ||||| ||||| ||||||||||||| |||||| |||||| |  ||||||||| ||||||||||||||||||||||||||    
T  66111 agaacaaccatacaagtgagaggcgccacactcttacccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaa 66200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 197 - 307
Target Start/End: Complemental strand, 29798340 - 29798228
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    ||||||||||||||||||  |  |||||||| |||||||||||||||| | |||||| || | |||||||  ||||||||||||||||||||||||||||    
T  29798340 aggttagaacaaccacacttgcaagagagacaccacactcttatccaagaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacct 29798241  T
Q  295 ctactgttttatc 307  Q
     |||| |||||||    
T  29798240 ttactattttatc 29798228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 32594756 - 32594845
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| |||||| ||||||||| |  |||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  32594756 agagagacaccacactcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatc 32594845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 307
Target Start/End: Original strand, 26661912 - 26662027
Alignment:
Q  194 tcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||| | |||||||||||||||  |||||||| ||||||||||| |||||| |||||| || | ||||||| |||| ||| |||||||||||||||||    
T  26661912 tcaaggattgaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaa 26662011  T
Q  292 cctctactgttttatc 307  Q
    ||| |||| |||||||    
T  26662012 cctttactcttttatc 26662027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 17294696 - 17294606
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| ||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||| ||||||||||| |||| |||||||    
T  17294696 gagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactcttttatc 17294606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 218 - 292
Target Start/End: Original strand, 44043812 - 44043886
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    |||||||| ||||||||||| |||||||||||||||| | ||||||| |||| ||||||||||||||||||||||    
T  44043812 agagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcatcttacttataaggtgttcaac 44043886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 14318985 - 14318896
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| |||||| |||||| || ||| ||||| |||| |||||||||||||||||||||||| |||| |||||||    
T  14318985 agagagacaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacctttactattttatc 14318896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 203 - 305
Target Start/End: Original strand, 26661545 - 26661649
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||||||||||||||  |||||||| ||||||||||| |||||| |||||| || |  |||||| |||||||| |||||||||||||||||||| ||||     
T  26661545 gaacaaccacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactc 26661644  T
Q  301 tttta 305  Q
    |||||    
T  26661645 tttta 26661649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 34649575 - 34649467
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||| ||  ||||||||||| |||||||| |||||| |||||| |||||||||||| ||| ||   |||||||||||||||||||| |||    
T  34649575 tagaacaaccacactagcaagagagacgcctcactcttacccaaaaccttaaggcattaggtttatgggttcttgcacttataaggtgttcaacctttac 34649476  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  34649475 tcttttatc 34649467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 41157128 - 41157020
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  | |||||| ||||||||||| |||||| |||||  || |  |||||| ||||||||||||||||||||||||||||| |||    
T  41157128 tagaacaaccacacaagcaatagagacaccacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacctttac 41157029  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  41157028 tcttttatc 41157020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 50052063 - 50052152
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| ||||||  |||||| | ||||||||| |||||||||||||||||| |||||||||| |||| |||||||    
T  50052063 agagagacaccacactcttacccaaaactttaagaaaataggtttatgggtcctcttacttataagatgttcaacctttactattttatc 50052152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 194 - 299
Target Start/End: Original strand, 39066214 - 39066321
Alignment:
Q  194 tcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||| ||||||||||||| |||  |||||||| |||||||||||||||||| ||||||||| |   ||||| |||| ||||| |||||||||||||||    
T  39066214 tcaaggctagaacaaccacataagtaagagagacaccacactcttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaa 39066313  T
Q  292 cctctact 299  Q
    ||| ||||    
T  39066314 cctttact 39066321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 218 - 305
Target Start/End: Complemental strand, 11977398 - 11977311
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgtttta 305  Q
    ||||||||  |||||||||| |||||| |||||| ||||||||||||  || ||||||||||||||||||||||| | ||||||||||    
T  11977398 agagagacatcacactcttacccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaacatttactgtttta 11977311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 34365044 - 34364954
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| ||||||||||| |||||| |||||| |  | ||||||| ||||||||||||||||||||||||||||| || | |||||||    
T  34365044 gagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattattttatc 34364954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 44290845 - 44290954
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactctt-atccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctcta 297  Q
    |||||||||| ||||||  ||||| || |||||||||| | |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| ||    
T  44290845 tagaacaaccgcacaagcaagagatacaccacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttta 44290944  T
Q  298 ctgttttatc 307  Q
    || |||||||    
T  44290945 ctattttatc 44290954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 197 - 307
Target Start/End: Complemental strand, 45084517 - 45084411
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||||||| ||||||  |||||||| |||| |||||| |||||| |||||||| ||| |      |||||||||||||||||||||||||||||    
T  45084517 aggttagaacaaccgcacaagcaagagagacaccactctcttacccaaaaccttaagacgttatg------ggtcctcttacttataaggtgttcaacct 45084424  T
Q  295 ctactgttttatc 307  Q
     ||||||||||||    
T  45084423 ttactgttttatc 45084411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 3550838 - 3550749
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| ||||||  ||||| || | |||||||  |||||||||||||||||||||||||||| |||| |||||||    
T  3550838 agagagacaccacactcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatc 3550749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 41157512 - 41157404
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  ||| |||| |||||||||||  ||||| || ||| || | ||||||| ||||||||||||||||||||||||||| | |||    
T  41157512 tagaacaaccacacaagcaagacagacaccacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttac 41157413  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  41157412 tcttttatc 41157404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 304
Target Start/End: Complemental strand, 37556246 - 37556144
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||||||||||||||  |||||||| ||||||||||| |||||| |||||| |  | ||||||| |||||||||||||||||| |||||||||| ||||     
T  37556246 gaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttat-ggtcctcttacttataagatgttcaacctttacta 37556148  T
Q  301 tttt 304  Q
    ||||    
T  37556147 tttt 37556144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 41759627 - 41759512
Alignment:
Q  194 tcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||| ||||||||||||| |||  |||||||| ||||||||||| |||||| |||||| || | | ||||| | || |||||||||||||||||||||    
T  41759627 tcaaggctagaacaaccacataagcaagagagacaccacactcttacccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaa 41759528  T
Q  292 cctctactgttttatc 307  Q
    | | |||| |||||||    
T  41759527 cttttactattttatc 41759512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 22077534 - 22077616
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||||||||||||||| |||||| |||||| |     |||||| ||||||||||||||||||||||||||||| ||||    
T  22077534 gagagagacgccacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttact 22077616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 66493 - 66593
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||||| | ||||||| |||||| |||||| |  || |||||| | ||||||||||||||||||||||||||| |||    
T  66493 tagaacaaccgcacaagcgagagagacgctatactcttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttac 66592  T
Q  299 t 299  Q
    |    
T  66593 t 66593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 3875352 - 3875460
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||| ||  |||||||| ||||| ||||| | |||| |||||| || | |||||||  ||||||||||||||||||||| |||||| |||    
T  3875352 tagaacaaccacactagtgagagagactccacattcttacctaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttac 3875451  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  3875452 ttttttatc 3875460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 158 - 307
Target Start/End: Original strand, 32168676 - 32168821
Alignment:
Q  158 ttgggtcactcggggagccttggaggatagtccatgtcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacat 255  Q
    |||||||||| |||||||||| | |||  |||||  || ||| |||||||||| ||||||  |||||||||||||||||||| |||||| || ||| ||     
T  32168676 ttgggtcactaggggagccttaggggactgtccacatcgaggctagaacaaccgcacaagcaagagagacgccacactcttacccaaaacctcaaggcaa 32168775  T
Q  256 taggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    | ||||||| ||||||||      ||||||||||||||| |||| |||||||    
T  32168776 tgggtttatgggtcctct------taaggtgttcaacctttactattttatc 32168821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 222 - 307
Target Start/End: Original strand, 44290502 - 44290587
Alignment:
Q  222 agacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||| ||| ||||||| |||||| |||||| || | ||||||| |||||||||||||||||| |||||||||| |||| |||||||    
T  44290502 agacaccatactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatc 44290587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 221 - 299
Target Start/End: Original strand, 22077153 - 22077231
Alignment:
Q  221 gagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    |||||| ||||||||||||||||| |||| | || |  |||||| |||||||||||||||||||| |||||||| ||||    
T  22077153 gagacgtcacactcttatccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaacctttact 22077231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 307
Target Start/End: Complemental strand, 34364626 - 34364536
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||  |||||||||| |||||| |||||| |  | ||||||  | ||||||||||||||||||||||||||| |||| |||||||    
T  34364626 gagagagacatcacactcttacccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaacctttactattttatc 34364536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 299
Target Start/End: Complemental strand, 44092013 - 44091931
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    |||| |||||||||||||||| ||| |||||||| | ||||| ||||| ||| |||| |||||||| ||||||||||| ||||    
T  44092013 gagaaagacgccacactcttacccacaatcttaaaatattagatttatgggttctctcacttataaagtgttcaacctttact 44091931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 3537227 - 3537276
Alignment:
Q  258 ggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  3537227 ggtttatgggtcctcttacttataaggtgttcaacctttactattttatc 3537276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 48588509 - 48588617
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| || |||||||| |||||| |||||| || |   ||||  |||| |||||||||||||||||||||||| |||    
T  48588509 tagaacaaccgcacaagtaagagagacaccgcactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttac 48588608  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  48588609 tattttatc 48588617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 217 - 297
Target Start/End: Complemental strand, 10351279 - 10351199
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctcta 297  Q
    ||||||||||||||||||||| ||||||||||||   | |  |||||| ||| |||| |||||||| ||||||||||||||    
T  10351279 gagagagacgccacactcttacccaaaatcttaaagtaatgtgtttatgggttctctcacttataaagtgttcaacctcta 10351199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 201 - 306
Target Start/End: Original strand, 38804376 - 38804483
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| | ||||||||| |||||| ||||||    | ||||||| | ||||||||||||||| ||||||||||| |||    
T  38804376 tagaacaaccgcacaagcaagagagacactacactcttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaacctttac 38804475  T
Q  299 tgttttat 306  Q
    | ||||||    
T  38804476 tcttttat 38804483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 9956027 - 9955940
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggttta-taggtcctcttacttataaggtgttcaacctctactgtttt 304  Q
    ||||||||  |||||||||| |||||| |||||| || | |||||| | ||||||||||||||||| ||||||||||| |||| ||||    
T  9956027 agagagacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctttactttttt 9955940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 37555864 - 37555759
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||||||||||||||  |||||||| ||||||||||| |||||| |||||| | | ||| ||  |||||||||||||||||| || ||||||||  |||     
T  37555864 gaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggc-taaggatttaaggtcctcttacttataatgtattcaaccttcacta 37555766  T
Q  301 ttttatc 307  Q
    |||||||    
T  37555765 ttttatc 37555759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 289
Target Start/End: Complemental strand, 45839749 - 45839678
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttc 289  Q
    |||||||| ||||| ||||| |||||| |||||| |||||  ||||| |||| |||||||||||||||||||    
T  45839749 agagagacaccacaatcttacccaaaaccttaaggcattacatttatgggtcttcttacttataaggtgttc 45839678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 5319986 - 5320079
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    ||||||||||||| |||  |||||||| | ||||||||| |||||| |||||| |  |  |||||| |||||||| ||||||||||||||||||    
T  5319986 tagaacaaccacataagcaagagagacactacactcttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaac 5320079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 5528794 - 5528883
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||  ||| |||||| ||||||| | |  ||||||  ||||||||| ||||||| |||||||||| |||| |||||||    
T  5528794 agagagacgccacacatttacccaaaaccttaagaaaatgagtttatgagtcctcttatttataagatgttcaacctttactcttttatc 5528883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 40082524 - 40082436
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||  ||||||||||| |||||| |||||| || |   ||||| | ||||||||||||||||||||||||||| |||| |||||||    
T  40082524 agagagataccacactcttacccaaaaccttaaggcaatgaatttat-gatcctcttacttataaggtgttcaacctttactattttatc 40082436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 41184505 - 41184554
Alignment:
Q  258 ggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||| ||||||||||||||||| ||||||||||| |||| |||||||    
T  41184505 ggtttatgggtcctcttacttataaagtgttcaacctttactattttatc 41184554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 217 - 292
Target Start/End: Complemental strand, 24448396 - 24448321
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    |||||| |||||||||| |||||||||||||||||||| |  ||||||  | ||||| ||||||||  ||||||||    
T  24448396 gagagacacgccacacttttatccaaaatcttaagacaatgagtttatgagccctctcacttataaaatgttcaac 24448321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 218 - 264
Target Start/End: Complemental strand, 11977062 - 11977016
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttat 264  Q
    |||||||| ||||||||||| |||||| |||||| ||||||||||||    
T  11977062 agagagacaccacactcttacccaaaaccttaaggcattaggtttat 11977016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 19283494 - 19283528
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaag 251  Q
    |||||||||||||||||||||||||||| ||||||    
T  19283494 gagagagacgccacactcttatccaaaaccttaag 19283528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 220 - 294
Target Start/End: Original strand, 22077871 - 22077944
Alignment:
Q  220 agagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||||||||||| || ||| |||| |  || || ||||| |||||||||||||||||| ||||||||||    
T  22077871 agagacgccacactcttaccccaaaccttaggctatgag-tttatgggtcctcttacttataagatgttcaacct 22077944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 299
Target Start/End: Original strand, 24600353 - 24600435
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||| |||||||||||  ||||| ||||||||| |  ||||||  || |||||||||||||  |||||||||| ||||    
T  24600353 gagagagacaccacactcttacacaaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaacctttact 24600435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 203 - 307
Target Start/End: Original strand, 45493997 - 45494107
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataa----ggtgttcaacctct 296  Q
    ||||||||||| |||  |||||||| ||||||||||||||||||  ||||| || | ||||||| | || |||||||||||     |||||||||||| |    
T  45493997 gaacaaccacataaggaagagagacaccacactcttatccaaaactttaaggcaatgggtttatggatcatcttacttatatatatggtgttcaaccttt 45494096  T
Q  297 actgttttatc 307  Q
    ||| |||||||    
T  45494097 actattttatc 45494107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 251
Target Start/End: Original strand, 47379817 - 47379851
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaag 251  Q
    ||||||||||||||||||||||||||||| |||||    
T  47379817 gagagagacgccacactcttatccaaaattttaag 47379851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 21378121 - 21378170
Alignment:
Q  258 ggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||| |||||||||||||||||| | |||||||| ||||||| ||||    
T  21378121 ggtttatgggtcctcttacttataagatattcaacctttactgttctatc 21378170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 202 - 299
Target Start/End: Complemental strand, 22793415 - 22793315
Alignment:
Q  202 agaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacat-taggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    ||||||||||||||||  ||||||||| ||||||||||  ||||| | |||| ||  | ||||||| | |||||| |||||||| || ||||||||||||    
T  22793415 agaacaaccacacaagtaagagagacgtcacactcttactcaaaaccgtaaggcaaatgggtttatggatcctctcacttataaagttttcaacctctac 22793316  T
Q  299 t 299  Q
    |    
T  22793315 t 22793315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 247 - 299
Target Start/End: Original strand, 30576652 - 30576704
Alignment:
Q  247 ttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||||| || ||| |||||||| ||| |||| ||||||||||||||||    
T  30576652 ttaagacattatgtctatgggtcctctcactcataaagtgttcaacctctact 30576704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 2e-27; HSPs: 41)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 16454712 - 16454619
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    |||||||||| ||||||  |||||||||||||||||||||||||||||||||| || | ||||||| |||||||||||||||||||||||||||    
T  16454712 tagaacaaccgcacaagcaagagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 16454619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 16455044 - 16454936
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||||||||||||||| |||||| |||||| || ||||||||| |||||| |||||||||||||||||||||| |||    
T  16455044 tagaacaaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttac 16454945  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  16454944 tcttttatc 16454936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 3409396 - 3409288
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| |||||| || |  |||||| ||||||||||||||||||||||||||||| |||    
T  3409396 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttac 3409297  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  3409296 tattttatc 3409288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 29518640 - 29518532
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| ||||||  | | ||||||| ||||||||||||||||||||||||||||| |||    
T  29518640 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttac 29518541  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  29518540 tattttatc 29518532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 29519057 - 29518949
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| ||||||  | | ||||||| ||||||||||||||||||||||||||||| |||    
T  29519057 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttac 29518958  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  29518957 tattttatc 29518949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 32741316 - 32741208
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| ||||||  | | ||||||| ||||||||||||||||||||||||||||| |||    
T  32741316 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttac 32741217  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  32741216 tattttatc 32741208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 197 - 305
Target Start/End: Complemental strand, 1127501 - 1127391
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||| |||||||| |||  |||||||||||||||||||| |||||| ||||||  | | |||||||  ||||||||||||||||||||||||||||    
T  1127501 aggttagagcaaccacataagtaagagagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacct 1127402  T
Q  295 ctactgtttta 305  Q
     |||| |||||    
T  1127401 ttactatttta 1127391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 1846885 - 1846777
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  | |||||| |||||||||||||||||| |||||| || | | ||||| ||| ||||||||||||||||||||||||| |||    
T  1846885 tagaacaaccgcacaagcaaaagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttac 1846786  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  1846785 tattttatc 1846777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 1950206 - 1950314
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  ||||||||| ||||||||||  ||||| |||||| |||||| ||||| | ||||||||||| ||||||||||||||| |||    
T  1950206 tagaacaaccgcacaagtaagagagacgtcacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaacctttac 1950305  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  1950306 tcttttatc 1950314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 10073637 - 10073737
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||| ||  |||||||| ||||||||||| ||||||||||||| || |  |||||| | ||||||||||||||||||||||||||| |||    
T  10073637 tagaacaaccacactagtgagagagacaccacactcttacccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaacctttac 10073736  T
Q  299 t 299  Q
    |    
T  10073737 t 10073737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 10074384 - 10074484
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||| ||  |||||||| ||||||||||| |||||| |||||| || |  |||||| ||||||||||||||||||||||||||||| |||    
T  10074384 tagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttac 10074483  T
Q  299 t 299  Q
    |    
T  10074484 t 10074484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 2377868 - 2377785
Alignment:
Q  222 agacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgtttta 305  Q
    |||| ||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||| |||||    
T  2377868 agacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactctttta 2377785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 202 - 306
Target Start/End: Complemental strand, 3415594 - 3415488
Alignment:
Q  202 agaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||| ||||||  |||||||| ||||||||||| | |||| |||||| || | ||||||| |||||||||||||||| |||||||||||| ||||    
T  3415594 agaacaaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttact 3415495  T
Q  300 gttttat 306  Q
     ||||||    
T  3415494 attttat 3415488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 2378263 - 2378155
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||| ||||  |||||||| ||||| ||||| | |||| ||||||  | | ||||||| ||||||||||||||||||||||||||||| |||    
T  2378263 tagaacaaccactcaagcaagagagacaccacattcttacctaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttac 2378164  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  2378163 tattttatc 2378155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 2578464 - 2578572
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  | |||||| ||||||||||| |||||| |||||| |  | ||||||| ||||||||||||||||| ||||||||||| |||    
T  2578464 tagaacaaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttac 2578563  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  2578564 tcttttatc 2578572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 2579893 - 2580001
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||| ||||| |||||| |||||| |  | ||||||| ||||||||||||||||| ||||||||||| |||    
T  2579893 tagaacaaccgcacaagcaagagagacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttac 2579992  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  2579993 tcttttatc 2580001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 3058344 - 3058255
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| |||||| |||||| || | ||||||| | ||||| ||||||||||||||||||||| |||| |||||||    
T  3058344 agagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatc 3058255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 5832048 - 5832155
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||| ||||||| ||| |||||||||||||   |  | ||||| ||||||||||||||||||||||||||||| |||    
T  5832048 tagaacaaccacacaagtaagagagacaccacacttttacccaaaatcttaaggggtg-gctttatgggtcctcttacttataaggtgttcaacctttac 5832146  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  5832147 tcttttatc 5832155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 6999836 - 6999925
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||||||||| |||||| || |  |||||| | ||||||||| ||||||||||||||| | |||| |||||||    
T  6999836 agagagacgccacactcttatccaaaaccttaaggcagtgagtttatggatcctcttacatataaggtgttcaacttttacttttttatc 6999925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 16107796 - 16107707
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| |||||| |||||| || | |||||||  |||||||||||||||||||||| ||||| |||| |||||||    
T  16107796 agagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaacctttacttttttatc 16107707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 215 - 307
Target Start/End: Original strand, 593746 - 593838
Alignment:
Q  215 aagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||  ||||||| ||| |||||| |||||| || | |||||||  |||||||||||||||||||||||||||| |||| |||||||    
T  593746 aagagagagataccacactattacccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacctttactcttttatc 593838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 187 - 292
Target Start/End: Original strand, 10073998 - 10074105
Alignment:
Q  187 gtccatgtcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataagg 284  Q
    ||||| ||| ||| ||||||||||| | |||  |||||||| ||||||| ||| |||||| |||||| || | ||||||| |||||||||||||||||||    
T  10073998 gtccacgtcgaggctagaacaaccaaataagcgagagagacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagg 10074097  T
Q  285 tgttcaac 292  Q
    ||||||||    
T  10074098 tgttcaac 10074105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 307
Target Start/End: Complemental strand, 35210313 - 35210233
Alignment:
Q  227 ccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||| |||||| |||||| || | | ||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  35210313 ccacactcttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaacctttactattttatc 35210233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 14748363 - 14748467
Alignment:
Q  201 tagaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||||||||||||||||  ||||||  |||||||||| |||||| |||||  || |  |||||| |||||||||| |||||||||||||||||| ||||     
T  14748363 tagaacaaccacacaagcaagagac--cacactcttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttacta 14748460  T
Q  301 ttttatc 307  Q
    |||||||    
T  14748461 ttttatc 14748467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 6071251 - 6071173
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    ||||||||||||||||||||||||||||||||||| || |  |||||| | || ||| |||||||| ||||||||||||    
T  6071251 gagagagacgccacactcttatccaaaatcttaaggcaatgagtttatggatcatctcacttataaagtgttcaacctc 6071173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 228 - 306
Target Start/End: Original strand, 32460630 - 32460708
Alignment:
Q  228 cacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    |||||||||| |||||| |||||| || | |||||||  |||||||||||||||||||||||||||| |||| ||||||    
T  32460630 cacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttat 32460708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 3409797 - 3409689
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| ||||||  | ||| || | ||||||| |||||||||||||||||| |||||||| | |||    
T  3409797 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttacttataagatgttcaacttttac 3409698  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  3409697 tattttatc 3409689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 26544167 - 26544078
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||  ||||||||||  ||||| |||||| |  | ||||||| ||||||||||||||||| ||||||||||| |||| |||||||    
T  26544167 agagagacatcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatc 26544078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 176 - 307
Target Start/End: Original strand, 5958603 - 5958732
Alignment:
Q  176 cttggaggatagtccatgtcaaggttagaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctctta 275  Q
    |||||||||  |||||  || |||||||||||| ||||||||||||| |   ||||||||   ||||||  |||||||| |  ||||||  || ||||||    
T  5958603 cttggaggagcgtccacatcgaggttagaacaatcacacaagagagacat--cacactctatcccaaaactttaagacaatgagtttatgagttctctta 5958700  T
Q  276 cttataaggtgttcaacctctactgttttatc 307  Q
     |||||||||||||||||| ||||||||||||    
T  5958701 tttataaggtgttcaacctttactgttttatc 5958732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 197 - 285
Target Start/End: Original strand, 2579509 - 2579599
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggt 285  Q
    |||||||||||||||||||||  |||||||| ||| ||| ||| |||||| |||||| || |  |||||| || |||||||||||||||||    
T  2579509 aggttagaacaaccacacaagcaagagagacaccatacttttacccaaaaccttaaggcaatgagtttatgggccctcttacttataaggt 2579599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 292
Target Start/End: Complemental strand, 2843692 - 2843598
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttatagg-tcctcttacttataaggtgttcaac 292  Q
    |||||||||||| ||||  |||||||  ||||||||||| |||||| |||||| || |  |||||| || |||||||||||||||||||||||||    
T  2843692 tagaacaaccactcaagcaagagagataccacactcttacccaaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttcaac 2843598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 10911684 - 10911598
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgtttt 304  Q
    ||||||||  ||||||||||| |||||  ||||| || |  ||||||  |||||||||||||||||||||||||||| |||| ||||    
T  10911684 agagagacatcacactcttattcaaaactttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttttt 10911598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 218 - 264
Target Start/End: Original strand, 11637761 - 11637807
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttat 264  Q
    |||||||| |||||||||||||||||||||||||||| | |||||||    
T  11637761 agagagacaccacactcttatccaaaatcttaagacaatgggtttat 11637807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 9062390 - 9062478
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||  ||||||| ||| |||||| ||||||||| |  ||||||  ||||||||||||||||| |||||||||| |||| |||||||    
T  9062390 agagagataccacacttttacccaaaa-cttaagacaatgagtttatgagtcctcttacttataagatgttcaacctttactattttatc 9062478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 12071712 - 12071764
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaag 251  Q
    |||||||||||||||||  |||||||||||||||||||| |||||| ||||||    
T  12071712 tagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaag 12071764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 12085055 - 12085107
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaag 251  Q
    |||||||||||||||||  |||||||||||||||||||| |||||| ||||||    
T  12085055 tagaacaaccacacaagtgagagagacgccacactcttacccaaaaccttaag 12085107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 307
Target Start/End: Complemental strand, 16108141 - 16108092
Alignment:
Q  258 ggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||| ||||||||||||||||||||||||||| | |||| |||||||    
T  16108141 ggtttatgggtcctcttacttataaggtgttcaacatttactcttttatc 16108092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 197 - 292
Target Start/End: Original strand, 2578852 - 2578949
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    |||| ||||||||||||||||  | |||||| ||||||||||| |||||| ||||||  | |  |||||| | |||||||| ||||||||| ||||||    
T  2578852 aggtcagaacaaccacacaagcaaaagagacaccacactcttacccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaac 2578949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 237 - 295
Target Start/End: Complemental strand, 20848418 - 20848360
Alignment:
Q  237 atccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    ||||| |||||||||||||| | |||||  ||||||||||||||||  |||||||||||    
T  20848418 atccagaatcttaagacattggatttatgcgtcctcttacttataaaatgttcaacctc 20848360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 295
Target Start/End: Complemental strand, 8482044 - 8481967
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    |||||||| ||||||||||| ||||||||||||| || |  ||||||  ||| ||| | |||||| ||||||||||||    
T  8482044 agagagacaccacactcttacccaaaatcttaaggcaatgagtttatgagtcatctcatttataaagtgttcaacctc 8481967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 258 - 299
Target Start/End: Original strand, 14789284 - 14789325
Alignment:
Q  258 ggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||| ||||||||||||| ||||||||||||||| ||||    
T  14789284 ggtttatgggtcctcttacttgtaaggtgttcaacctttact 14789325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 5475 - 5386
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||||||||||||||||| || | ||||||| ||||||||||||||||||||||||||||| ||||||| ||||    
T  5475 agagagacaccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatc 5386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 56; Significance: 3e-23; HSPs: 65)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 188 - 307
Target Start/End: Complemental strand, 2740848 - 2740729
Alignment:
Q  188 tccatgtcaaggttagaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgt 287  Q
    ||||| || ||| |||||||||||||   |||||||||||||||||||||   |||| |||||| |  | ||||||||||||||||||||||||||||||    
T  2740848 tccatatcgaggctagaacaaccacaagtgagagagacgccacactcttacgtaaaaccttaaggctctgggtttataggtcctcttacttataaggtgt 2740749  T
Q  288 tcaacctctactgttttatc 307  Q
    ||||||| ||||||| ||||    
T  2740748 tcaacctttactgttctatc 2740729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 1731666 - 1731774
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  ||||| || ||||||||||| |||||| |||||| || | ||||||| |||||||||| ||||||| |||||||||| |||    
T  1731666 tagaacaaccacacaagcaagagaaacaccacactcttacccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttac 1731765  T
Q  299 tgttttatc 307  Q
    |||||||||    
T  1731766 tgttttatc 1731774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 25483473 - 25483365
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||| |||||| || | ||||||| | |||||||||||||||| |||||||||| |||    
T  25483473 tagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttac 25483374  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  25483373 tattttatc 25483365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 45496923 - 45496834
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| |||||| ||||||||| |  |||||||||||||||||||||||||||||||||||| |||  |||||||    
T  45496923 agagagacaccacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatc 45496834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 54109049 - 54108942
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||    
T  54109049 tagaacaaccgcacaagcaagagagacaccacactcttacccaaaa-cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttac 54108951  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  54108950 tattttatc 54108942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 44620497 - 44620382
Alignment:
Q  194 tcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    ||||||||||||||||||||||||  ||||| ||  |||||||||| |||||| |||||| || | ||||||| ||  |||||| |||||||||||||||    
T  44620497 tcaaggttagaacaaccacacaagcaagagaaacatcacactcttacccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaa 44620398  T
Q  292 cctctactgttttatc 307  Q
    ||| ||||||||||||    
T  44620397 cctttactgttttatc 44620382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 54936332 - 54936225
Alignment:
Q  201 tagaacaaccacacaa-gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||||||| |  ||||||||| ||||||||||| |||||| |||||| || | ||||||| |||||||||||||| |||||||||||||| ||||    
T  54936332 tagaacaaccacatagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacctttact 54936233  T
Q  300 gttttatc 307  Q
     |||||||    
T  54936232 attttatc 54936225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 50630777 - 50630882
Alignment:
Q  204 aacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgt 301  Q
    ||||||| ||||||  |||||||| ||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||| ||||||||||| |||| |    
T  50630777 aacaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactat 50630876  T
Q  302 tttatc 307  Q
    ||||||    
T  50630877 tttatc 50630882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 4955355 - 4955444
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||||||| |||||| |||||| || | |||||||  ||||||||||||||||||||||||||||  ||| |||||||    
T  4955355 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaaccttaactattttatc 4955444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 10246056 - 10245949
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    ||||||||||| |||||  || ||||| ||||||||||| |||||| |||||| | || ||||||| ||||||||||||||||||||||||||||| |||    
T  10246056 tagaacaaccagacaagcaagggagacaccacactcttacccaaaaccttaaggctttgggtttat-ggtcctcttacttataaggtgttcaacctttac 10245958  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  10245957 tcttttatc 10245949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 39404535 - 39404427
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||| ||||| ||||  |||||| |||||| |  ||||||||| |||||||||||||||||||||||| |||| |||    
T  39404535 tagaacaaccacacaagcaagagagacaccacattcttgcccaaaaccttaaggctataggtttatgggtcctcttacttataaggtgttccacctttac 39404436  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  39404435 tcttttatc 39404427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 50002563 - 50002455
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  |||||||| ||||||||||| |||||| ||||||||| | | ||||| |||||||||||||| || ||||||||||| |||    
T  50002563 tagaacaaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttac 50002464  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  50002463 tcttttatc 50002455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 247 - 307
Target Start/End: Original strand, 49076515 - 49076575
Alignment:
Q  247 ttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  49076515 ttaagacaatgggtttataggtcctcttacttataaggtgttcaacctttactgttttatc 49076575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 49880278 - 49880190
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttat 306  Q
    |||||||| |||| |||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||| ||||||    
T  49880278 agagagacaccacgctcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttactattttat 49880190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 217 - 307
Target Start/End: Original strand, 22183301 - 22183391
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||||||||||||||| |||||| || | ||||||| |||||| ||||||||||  |||||||| | |||| |||||||    
T  22183301 gagagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttttatc 22183391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 288
Target Start/End: Complemental strand, 36629374 - 36629285
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgtt 288  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||| |||||| || |  |||||| |||||||||||||||||||||||    
T  36629374 tagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtt 36629285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 201 - 299
Target Start/End: Original strand, 54741199 - 54741297
Alignment:
Q  201 tagaacaaccacacaagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||| ||||  ||||||||  | |||||||||||||||| ||||||||| |  || ||| ||||||||||||||||||||||||||||| ||||    
T  54741199 tagaacaacaacacgtgagagagagactacactcttatccaaaaccttaagacaatctgtgtatgggtcctcttacttataaggtgttcaacctttact 54741297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 299
Target Start/End: Complemental strand, 3340944 - 3340844
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  ||| |||| ||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||| ||||||| |||    
T  3340944 tagaacaaccccacaagcaagaaagacaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacctttac 3340845  T
Q  299 t 299  Q
    |    
T  3340844 t 3340844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 6975494 - 6975583
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||||||||||||| |||||||||||||| | | | |||||  ||||||||||||||||| | |||||||| |||| |||||||    
T  6975494 agagagacgccacactcttacccaaaatcttaagataatggatttatgagtcctcttacttataagatattcaacctttactattttatc 6975583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 294
Target Start/End: Original strand, 22027998 - 22028075
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    ||||||||| ||||| ||||| |||||| |||||| || || |||||| |||||||||||||||||||||||||||||    
T  22027998 gagagagacaccacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacct 22028075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 36608680 - 36608788
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||| ||  |||||||| ||||||||||| |||||| ||||||||| | | ||||| | ||||||||||||| ||||||||||| | |||    
T  36608680 tagaacaaccacactagtgagagagacaccacactcttacccaaaaccttaagacaatggatttatggatcctcttacttatgaggtgttcaacttttac 36608779  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  36608780 tcttttatc 36608788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 44621120 - 44621031
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||| || ||||||||||| |||||| ||||||||| |  ||||||  | |||||||||||||||||||||||||| ||||||||||||    
T  44621120 agagaaacaccacactcttacccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaacctttactgttttatc 44621031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 54017614 - 54017722
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    ||||||||||||| |||  ||||||||  |||||||||| | |||| |||||| || | ||||||| |||||||||||||||||| |||||||||| |||    
T  54017614 tagaacaaccacataagcaagagagacatcacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttac 54017713  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  54017714 tattttatc 54017722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 55933162 - 55933251
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| ||||||  ||||| || | ||||||| ||||||||||||||||||||||||||||  |||| |||||||    
T  55933162 agagagacaccacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatc 55933251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 290
Target Start/End: Complemental strand, 18879943 - 18879852
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttca 290  Q
    ||||||||||||||||   | ||||||| |||||||||| |||||| ||||||  | |||||||||||||| ||||||||||||||||||||    
T  18879943 tagaacaaccacacaaccaaaagagacgtcacactcttacccaaaaccttaaggaaataggtttataggtcatcttacttataaggtgttca 18879852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 294
Target Start/End: Original strand, 22028388 - 22028483
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||| ||||||  |||||||| ||||||||||| ||||||  |||||||| |  |||||| |||||||||||| ||||||||||||||||    
T  22028388 tagaacaacctcacaagcaagagagacaccacactcttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacct 22028483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 201 - 306
Target Start/End: Complemental strand, 39404155 - 39404048
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||||||||||||||| |||||| |||||  |  |  ||||||  |||||||||||||||| ||||||||||| |||    
T  39404155 tagaacaaccacacaagcaagagagacgccacactcttacccaaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacctttac 39404056  T
Q  299 tgttttat 306  Q
    | ||||||    
T  39404055 tcttttat 39404048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 195 - 307
Target Start/End: Original strand, 34646662 - 34646776
Alignment:
Q  195 caaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    ||||| |||||||||||||||    |||||||| ||||||||||| |||||| |||||| || |  ||||||  ||||||||| ||||||||||||||||    
T  34646662 caaggctagaacaaccacacagaccagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaac 34646761  T
Q  293 ctctactgttttatc 307  Q
     | ||||||||||||    
T  34646762 atttactgttttatc 34646776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 201 - 305
Target Start/End: Complemental strand, 50459858 - 50459752
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||||||||  |||||||| |||| |||||| | |||| ||||||| | | |||||||  ||||||||||||||||| |||||||||| |||    
T  50459858 tagaacaaccacacaagcaagagagacaccacgctcttacctaaaaccttaagataatgggtttatgagtcctcttacttataagatgttcaacctttac 50459759  T
Q  299 tgtttta 305  Q
    | |||||    
T  50459758 tctttta 50459752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 54017750 - 54017829
Alignment:
Q  228 cacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||| | |||| ||||||||| | ||  ||| ||||||||||||||||||||||||||||| ||||||||||||    
T  54017750 cacactcttacctaaaaccttaagacaatgggaatatgggtcctcttacttataaggtgttcaacctttactgttttatc 54017829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 307
Target Start/End: Original strand, 18932771 - 18932876
Alignment:
Q  204 aacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgt 301  Q
    ||||||||| ||||  |||||||| ||||||||||| | |||| |||||| || | ||||||| |||||||||| ||||||||| |||||||| |||| |    
T  18932771 aacaaccactcaagtaagagagacaccacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaacctttactat 18932870  T
Q  302 tttatc 307  Q
    ||||||    
T  18932871 tttatc 18932876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 54108674 - 54108565
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacatt-aggtttataggtcctcttacttataaggtgttcaacctcta 297  Q
    |||||||||||||||||  ||| |||| ||||||||||| |||||| |||||| || | |  ||||| |||||| |||||||||||||||||||||| ||    
T  54108674 tagaacaaccacacaagcaagatagacaccacactcttagccaaaaccttaaggcaatgaattttatgggtccttttacttataaggtgttcaaccttta 54108575  T
Q  298 ctgttttatc 307  Q
    || |||||||    
T  54108574 ctattttatc 54108565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 197 - 299
Target Start/End: Original strand, 16889551 - 16889655
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||||| ||||||||  |||||||| ||| ||||||| ||||||  ||||| || |||||||||   |||||||||||||||||| ||||||||    
T  16889551 aggttagaacaatcacacaaggaagagagacaccatactcttacccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattcaacct 16889650  T
Q  295 ctact 299  Q
     ||||    
T  16889651 ttact 16889655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 201 - 307
Target Start/End: Complemental strand, 41370494 - 41370386
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||| ||||  |||||||| | ||||||||| ||||||  ||||| || | ||||||| |||||||||||||||||||| |||||| | |||    
T  41370494 tagaacaaccactcaagcaagagagacactacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttac 41370395  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  41370394 tattttatc 41370386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 215 - 307
Target Start/End: Complemental strand, 52885009 - 52884916
Alignment:
Q  215 aagagagagacgccacactcttatcc-aaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||| ||||| ||||| || |||| |||||| || | ||||||| | ||||||||||||||||||||||||||| |||| |||||||    
T  52885009 aagagagagacaccacattcttaccccaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatc 52884916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 194 - 307
Target Start/End: Complemental strand, 20825980 - 20825865
Alignment:
Q  194 tcaaggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||| |||||||||| || |||  ||||| || ||||||||||| |||||| |||||| |   |||||||| ||| |||||| |||||||||||||||    
T  20825980 tcaaggctagaacaaccgcataaggaagagaaacaccacactcttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataaggtgttcaa 20825881  T
Q  292 cctctactgttttatc 307  Q
    ||| |||| |||||||    
T  20825880 cctttactcttttatc 20825865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 302
Target Start/End: Original strand, 32941142 - 32941245
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||| ||||||  ||||||||| |||||||||| |||||| |||||| || |  ||||||  | ||||||| |||||||||||||||||| |||    
T  32941142 tagaacaaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggtgttcaacctttac 32941241  T
Q  299 tgtt 302  Q
    ||||    
T  32941242 tgtt 32941245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 201 - 294
Target Start/End: Original strand, 34004604 - 34004698
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||| ||||||  ||||||||| |||||||||||| |||| ||||||  || || ||||| |||||||||||||||||| ||||||||||    
T  34004604 tagaacaaccgcacaagggagagagacggcacactcttatcgaaaaccttaaggaatgag-tttatgggtcctcttacttataagttgttcaacct 34004698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 203 - 299
Target Start/End: Original strand, 3244472 - 3244570
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||| |||||  ||||||||| |||| ||||| ||||||  |||||||| |  |||||| |||||||||||||||||| |||||||||| ||||    
T  3244472 gaacaaccatacaagtgagagagacgacacattcttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttact 3244570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 31691274 - 31691203
Alignment:
Q  214 caagagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggt 285  Q
    ||||||| |||||||||||||||| |||||| |||||| || |  |||||| ||||||||||||||||||||    
T  31691274 caagagatagacgccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggt 31691203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 292
Target Start/End: Original strand, 39792879 - 39792972
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaac 292  Q
    |||||||||||||||||  |||||||| ||||||||||| |||||| |||||| || |  |||||  | ||||||| |||||||||||||||||    
T  39792879 tagaacaaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaac 39792972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 307
Target Start/End: Original strand, 41707502 - 41707591
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| ||||||||||| |||||| ||||||||| |  |||||| ||| || ||||||||| |||||||||||| |||| |||||||    
T  41707502 gagagagacaccacactctta-ccaaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatc 41707591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 304
Target Start/End: Complemental strand, 43174625 - 43174539
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgtttt 304  Q
    |||||||||||||||||||| |||| |  |||||    |||||||||  |||||||||||||||||||||||||||| |||| ||||    
T  43174625 agagagacgccacactcttacccaacactttaaggtcataggtttatgtgtcctcttacttataaggtgttcaacctttactctttt 43174539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 52884814 - 52884724
Alignment:
Q  218 agagagacgccacactcttatcc-aaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||||||||||| || |||| |||||| || | ||||||| | || |||||||||||||||||||||||| |||| |||||||    
T  52884814 agagagacaccacactcttaccccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactattttatc 52884724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 299
Target Start/End: Original strand, 16888854 - 16888935
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||  |||||||||| |||||| | ||||||| |  |||||||||| |||||||||||||||| |||||||| ||||    
T  16888854 agagagacatcacactcttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttact 16888935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 223 - 299
Target Start/End: Complemental strand, 2741184 - 2741108
Alignment:
Q  223 gacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||||||||||| |||||| |||||| || | |  |||| |||||||||||||||||||| |||||||| ||||    
T  2741184 gacgccacactcttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttact 2741108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 299
Target Start/End: Complemental strand, 44620793 - 44620697
Alignment:
Q  204 aacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacatta-ggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    ||||||| ||||||  |||||||  ||||||||||| |||||| ||||||   ||| ||||||| ||||||||||||||||| ||||||||||||||||    
T  44620793 aacaaccgcacaagcaagagagaaaccacactcttacccaaaaccttaagg--ttatggtttatgggtcctcttacttataaagtgttcaacctctact 44620697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 218 - 306
Target Start/End: Complemental strand, 49303024 - 49302934
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttac--ttataaggtgttcaacctctactgttttat 306  Q
    ||||| || ||||||||||| |||||| |||||| || | ||||||| |||||||||||  ||||||| |||||||||| |||| ||||||    
T  49303024 agagatacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttacttttttat 49302934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 201 - 307
Target Start/End: Original strand, 54343027 - 54343128
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctac 298  Q
    |||||||||||| ||||  |||||||| ||||||||||| |||||| |||||| || | ||       |||||||||||||||||||||||||||| |||    
T  54343027 tagaacaaccactcaagcaagagagacaccacactcttacccaaaaccttaaggcaatggg-------gtcctcttacttataaggtgttcaacctttac 54343119  T
Q  299 tgttttatc 307  Q
    | |||||||    
T  54343120 tattttatc 54343128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 217 - 295
Target Start/End: Complemental strand, 28034348 - 28034270
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctc 295  Q
    ||||||||||||||||||||| | |||| |||||  || || |||||| ||| |||| |||||||| ||||||||||||    
T  28034348 gagagagacgccacactcttacctaaaaccttaaagcaataagtttatgggttctctcacttataaagtgttcaacctc 28034270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 36572154 - 36572049
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactg 300  Q
    |||||||| ||||||  |||||||| ||| ||||| | |||||| |||||| || | | ||||| |||| |||||||||||||||||||||| | ||||     
T  36572154 gaacaaccgcacaagcgagagagacaccatactctaacccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactc 36572055  T
Q  301 ttttat 306  Q
    ||||||    
T  36572054 ttttat 36572049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 291
Target Start/End: Complemental strand, 43827580 - 43827485
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaa 291  Q
    |||||||||||||| ||||||  |||||||| |||||||||||||| ||| |||||| || |   ||||| |||||||||| |||||||| ||||||    
T  43827580 aggttagaacaaccgcacaagtaagagagacaccacactcttatcc-aaaccttaaggcaatgaatttatgggtcctcttatttataaggagttcaa 43827485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 201 - 274
Target Start/End: Complemental strand, 19504833 - 19504758
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctctt 274  Q
    |||||||||||||||||  ||| |||||||||||||||| ||||||  ||||| || ||| ||||| |||||||||    
T  19504833 tagaacaaccacacaagcaagatagacgccacactcttacccaaaactttaaggcaatagatttatgggtcctctt 19504758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 2891881 - 2891924
Alignment:
Q  239 ccaaaatcttaagacattaggtttataggtcctcttacttataa 282  Q
    |||||| ||||||||||||||||||| | |||||||||||||||    
T  2891881 ccaaaaccttaagacattaggtttatggatcctcttacttataa 2891924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 307
Target Start/End: Complemental strand, 3341236 - 3341157
Alignment:
Q  228 cacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||| |||||||||||| ||| |    |||| ||||||||||||||||| ||||| ||||| |||| |||||||    
T  3341236 cacactcttacccaaaatcttaaaacaatgatgttatgggtcctcttacttataaagtgtttaacctttactcttttatc 3341157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 268 - 307
Target Start/End: Original strand, 4390189 - 4390228
Alignment:
Q  268 tcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||||||||| |||| |||||||    
T  4390189 tcctcttacttataaggtgttcaacctttactcttttatc 4390228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 228 - 307
Target Start/End: Original strand, 45489380 - 45489458
Alignment:
Q  228 cacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||||| | |||||||||| ||| ||||||||   || |||||||||||| |||||||||||| |||| |||||||    
T  45489380 cacactcttaccaaaaatcttaa-acagtaggtttaagagttctcttacttatatggtgttcaacctttactcttttatc 45489458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 228 - 282
Target Start/End: Complemental strand, 3271895 - 3271841
Alignment:
Q  228 cacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataa 282  Q
    |||||||||| |||||| |||||| || ||||||||| ||| |||||||||||||    
T  3271895 cacactcttacccaaaaccttaaggcaataggtttatgggttctcttacttataa 3271841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 307
Target Start/End: Original strand, 48111735 - 48111825
Alignment:
Q  217 gagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| |||||||| || | |||| ||||||  | | | |||||| ||||| |||||||||| ||||||||||| |||| |||||||    
T  48111735 gagagagacaccacactcatacctaaaaccttaaggtaatggatttataagtccttttacttataatgtgttcaacctttactcttttatc 48111825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 218 - 307
Target Start/End: Complemental strand, 20826335 - 20826246
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||  |||||||||| | ||||| ||||| |  | ||||||| ||| ||||||||||||| ||||||||| | |||| |||||||    
T  20826335 agagagacatcacactcttacctaaaatgttaaggctatgggtttatgggttctcttacttataacgtgttcaacttttactattttatc 20826246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 44620362 - 44620325
Alignment:
Q  270 ctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||||||| |||| |||||||    
T  44620362 ctcttacttataaggtgttcaacctttactattttatc 44620325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 44621011 - 44620974
Alignment:
Q  270 ctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||||||| ||| ||||||||    
T  44621011 ctcttacttataaggtgttcaacctttacagttttatc 44620974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 270 - 307
Target Start/End: Complemental strand, 44621492 - 44621455
Alignment:
Q  270 ctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||| ||||| ||||||||||||    
T  44621492 ctcttacttataaggtgtttaacctttactgttttatc 44621455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 201 - 282
Target Start/End: Original strand, 23817700 - 23817783
Alignment:
Q  201 tagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataa 282  Q
    |||||||||||||| ||  |||||||| ||||||||||| |||||| |||||| || |  ||||||   |||||||||||||||    
T  23817700 tagaacaaccacactagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgaatcctcttacttataa 23817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 263
Target Start/End: Original strand, 34946148 - 34946196
Alignment:
Q  215 aagagagagacgccacactcttatccaaaatcttaagacattaggttta 263  Q
    ||||||||||| ||||||||||| |||||||| |||| ||| |||||||    
T  34946148 aagagagagacaccacactcttacccaaaatcctaaggcatgaggttta 34946196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 203 - 307
Target Start/End: Complemental strand, 5532 - 5425
Alignment:
Q  203 gaacaaccacacaag--agagagacgccacactcttatccaaaatctt-aagacattaggtttataggtcctcttacttataaggtgttcaacctctact 299  Q
    |||||||| ||||||  |||||||| ||||||||||| |||||| ||| |||||| || |||||| || |||||||||||||||||||||||||| ||||    
T  5532 gaacaaccccacaagcaagagagacaccacactcttacccaaaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttact 5433  T
Q  300 gttttatc 307  Q
     |||||||    
T  5432 attttatc 5425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 243 - 307
Target Start/End: Complemental strand, 5870 - 5806
Alignment:
Q  243 aatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||| || | ||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  5870 aatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatc 5806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 222 - 305
Target Start/End: Original strand, 558 - 641
Alignment:
Q  222 agacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgtttta 305  Q
    |||| ||||||||||| |||||| |||||| || | ||||||| ||||||||||||||||||||||||||||| |||| |||||    
T  558 agacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactctttta 641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 266 - 307
Target Start/End: Original strand, 230 - 271
Alignment:
Q  266 ggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||||||||||||||||||||||||| |||| |||||||    
T  230 ggtcctcttacttataaggtgttcaacctttactattttatc 271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 307
Target Start/End: Original strand, 1146 - 1235
Alignment:
Q  218 agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    |||||||| ||| ||||||| |||||| |||||| || | |||||||  ||||| || ||||||||||||||||||| |||| |||||||    
T  1146 agagagacaccatactcttacccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatc 1235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 216 - 289
Target Start/End: Original strand, 1729 - 1802
Alignment:
Q  216 agagagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttc 289  Q
    |||||||||| ||||||||||| | |||| |||||| || | ||||||| |||||||| |||||||||||||||    
T  1729 agagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctctcacttataaggtgttc 1802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 258 - 307
Target Start/End: Original strand, 17536 - 17585
Alignment:
Q  258 ggtttataggtcctcttacttataaggtgttcaacctctactgttttatc 307  Q
    ||||||| |||||||||||||| |||||||||||||| |||| |||||||    
T  17536 ggtttatgggtcctcttacttacaaggtgttcaacctttactattttatc 17585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 197 - 307
Target Start/End: Complemental strand, 47501 - 47389
Alignment:
Q  197 aggttagaacaaccacacaag--agagagacgccacactcttatccaaaatcttaagacattaggtttataggtcctcttacttataaggtgttcaacct 294  Q
    |||||||||||||| | ||||  |||||||| ||||| | ||| ||||||  ||||| || | ||||||| | | |||||||||||||||||||||| ||    
T  47501 aggttagaacaaccgcgcaagcaagagagacaccacatttttacccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaact 47402  T
Q  295 ctactgttttatc 307  Q
     |||| |||||||    
T  47401 ttactattttatc 47389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 292
Target Start/End: Original strand, 10192 - 10225
Alignment:
Q  259 gtttataggtcctcttacttataaggtgttcaac 292  Q
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T  10192 gtttatgggtcctcttacttataaggtgttcaac 10225  T

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