View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7962_high_6 (Length: 494)
Name: NF7962_high_6
Description: NF7962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7962_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 381; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 381; E-Value: 0
Query Start/End: Original strand, 87 - 479
Target Start/End: Complemental strand, 40772366 - 40771974
Alignment:
| Q |
87 |
gacaaagcagtgaatatccgcataactgtctattagtggaccccgtttgagtcttcacaatgtctcttacataaacctttgaggccattggagtggtgac |
186 |
Q |
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| T |
40772366 |
gacaaagcagtgaatatccgcataactgtctattagtggaccccgtttgagtcttcacaatgtctcttacataaacctttgaggccattggagtggtgac |
40772267 |
T |
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| Q |
187 |
caaacagcttggcttgctgtaagcaaaaacaacaatttcatctctatttaagtgtgatcacaaacatattctaagtttaatagaaattctaaagctgtaa |
286 |
Q |
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| T |
40772266 |
caaacagcttggcttgctgtaagcaaaaacaacaatttcatctctatttaagtgtgatcacaaacatattctaagtttaatagaaattctaatgctgtaa |
40772167 |
T |
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| Q |
287 |
ccctagagatacattatggaagaatcgaaaaacaaacaattagagttagttgacaccctaactccactacctcaatctgaatctgaacctcgagagtttt |
386 |
Q |
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| T |
40772166 |
ccctagaaatacattatggaagaatcgaaaaacaaacaattagagttagttgacaccctaactccactacctcaatctgaatctgaacctcgagagtttt |
40772067 |
T |
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| Q |
387 |
cctacttccttgaagaaaaggaaccggggaatgaaggaacttcaagcagtgttgttaaacaagagcgtgtcgtgagtgatcatgctacttctt |
479 |
Q |
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||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40772066 |
cctacttccttgaagaaaaggaaccggggaacgaaggaacttcaagcagtgttgttaaacaagagcgtgtcgtgagtgatcatgctacttctt |
40771974 |
T |
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