View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7962_low_31 (Length: 314)
Name: NF7962_low_31
Description: NF7962
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7962_low_31 |
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Alignment Details
Target: chr7 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 8 - 263
Target Start/End: Complemental strand, 39948278 - 39948023
Alignment:
| Q |
8 |
atggtgttatagagaagggatacaatgaaactttgcttaaaatgagagggtttctttggatcaatgttcttaaggaacttacacttctatttaatgatgc |
107 |
Q |
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| T |
39948278 |
atggtgttatagagaagggatacaatgaaactttgctcaaaatgagagggtttctttggatcaatgttcttaaggaacttacacttctatttaatgatgc |
39948179 |
T |
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| Q |
108 |
attgtagagctctctcattgtgtcatcctgtaaaatctccatttaataaatattgaacaacaaaccaagtaatattgatgagtcttttgaagtgttcttt |
207 |
Q |
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|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39948178 |
attgtagagctctctcatcgtgtcatcctgtaaaatctccatttaataaatattgaacaacaaaccaagtaatattgatgagtcttttgaagtgttcttt |
39948079 |
T |
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| Q |
208 |
gaacctcgacactttctctgggtctggtgagctctcgagatctaactaacttaaag |
263 |
Q |
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| T |
39948078 |
gaacctcgacactttctctgggtctggtgagctcacgagatctaactaacttaaag |
39948023 |
T |
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