View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7965_low_2 (Length: 793)
Name: NF7965_low_2
Description: NF7965
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7965_low_2 |
 | |
|
| [»] scaffold0394 (1 HSPs) |
| | |
|
| [»] scaffold0254 (1 HSPs) |
| | |
|
Alignment Details
Target: chr7 (Bit Score: 237; Significance: 1e-131; HSPs: 29)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 237; E-Value: 1e-131
Query Start/End: Original strand, 468 - 788
Target Start/End: Original strand, 31541298 - 31541618
Alignment:
| Q |
468 |
tccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccactttta |
567 |
Q |
| |
|
||||||||||||||||||||||||||||||||| || |||||||||||||| ||||| |||||||||||| |||||||||||||| |||||||||||||| |
|
|
| T |
31541298 |
tccttgatgcaagtattctagtcctcgagcaattccgattgcaatttggtacaatgtcttccaatccaaactacaaatagcatcatgaaatccactttta |
31541397 |
T |
|
| Q |
568 |
aagatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgttctcataacaaaatcccaaaagtgagacgatgttcatatgtg |
667 |
Q |
| |
|
| ||||||||||||||||||||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |
|
|
| T |
31541398 |
agaatgaacttatccaatgatcctttgggcaagaactcatatattagtgctcttttgttctcataacaaaatcccaaaagtgagacaatgttcacatgtg |
31541497 |
T |
|
| Q |
668 |
acgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaagct |
767 |
Q |
| |
|
| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||| | |
|
|
| T |
31541498 |
atgttctactaatgctagcaacttcatttatgaaatcttctccatttcccttagactcatttataattttcactgctacttgacgaccatcaggtaagtt |
31541597 |
T |
|
| Q |
768 |
tgctttgtacacaacaccata |
788 |
Q |
| |
|
||||||||| ||||||||||| |
|
|
| T |
31541598 |
tgctttgtaaacaacaccata |
31541618 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 193; E-Value: 1e-104
Query Start/End: Original strand, 67 - 470
Target Start/End: Original strand, 31540644 - 31541048
Alignment:
| Q |
67 |
tacaatcacattttcgcttttg-cattgctaagctttttcgattttatggaatcattcttcagttaaggtattgagtttttctctaacaaattgctagaa |
165 |
Q |
| |
|
||||||||||||||| |||||| | ||||| | ||| | | |||||||||| ||||||||| ||| | | ||||||| |||||||||||||||| ||| |
|
|
| T |
31540644 |
tacaatcacattttcacttttgtctttgctgaacttatctggttttatggaaccattcttcaattaggatgctgagtttgtctctaacaaattgctggaa |
31540743 |
T |
|
| Q |
166 |
gacacatgtgaagtttgtaatgatgacatttgaggagaatataagaaaggctttggaggataaggcactgactgaagtggtccttgtagcatttctatta |
265 |
Q |
| |
|
|||| || ||||||||| |||||||||| | |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||| || |
|
|
| T |
31540744 |
gacaaatatgaagtttgcaatgatgacaatgcaggagaatataagaaaggctttggaggatatggcaccgactgaagtggtccttgtagcatttctaata |
31540843 |
T |
|
| Q |
266 |
ctctattcatagatggtctatctaatggatttgtttgaatgcaccatagactaaccatagtaatctttcttaccgtatcattttcttcctttgagattac |
365 |
Q |
| |
|
|| || |||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||| || | |
|
|
| T |
31540844 |
ctttactcattgatggtctatcggctggatttgtttgaatgcaccatagactcaccatagtaatcattcttaccatatcattttcttcctttgagtttgc |
31540943 |
T |
|
| Q |
366 |
taaacaatctacattgttattatttagctcgagatccttataaattcaatcaggaaagaacatttcagaagtacatgaccctccaatgtcattattcttt |
465 |
Q |
| |
|
|||||||| || ||||||| | |||| |||||||||||||| ||||| ||||| |||||||||||||||||||||||||| |||||| ||||||| |
|
|
| T |
31540944 |
taaacaattagcaaggttattagcttgctcaagatccttataaatccaatctggaaaacacatttcagaagtacatgaccctccagtgtcataattcttt |
31541043 |
T |
|
| Q |
466 |
cttcc |
470 |
Q |
| |
|
||||| |
|
|
| T |
31541044 |
cttcc |
31541048 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 468 - 776
Target Start/End: Original strand, 31532641 - 31532949
Alignment:
| Q |
468 |
tccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccactttta |
567 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||| |||||||||||||| |||| |||||||| ||| |||||||||||||||| || |||||||| |
|
|
| T |
31532641 |
tccttgatgcaagtattctagtccttgagcaatgccgattgcaatttggtacaatgcgttccaatctaaactacaaatagcatcaggcaacccacttttg |
31532740 |
T |
|
| Q |
568 |
aagatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgttctcataacaaaatcccaaaagtgagacgatgttcatatgtg |
667 |
Q |
| |
|
| |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||| ||||| |
|
|
| T |
31532741 |
aggatgaatttatctaatgatcctctggacatgaattcatatattagtgctcttttgttctcatagcaaaaacccaaaagtgaaacgatgttcacatgtg |
31532840 |
T |
|
| Q |
668 |
acgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaagct |
767 |
Q |
| |
|
| |||||||||||||| |||||||||||| |||||||||||| ||||||||| ||||||||||| | |||||| || |||| ||||||||| |||||| | |
|
|
| T |
31532841 |
atgttctactaatgcttgcaacttcatttgtgaattcttctctatttccctttgactcgtttattactttcaccgccacttcacgaccatcaggtaagtt |
31532940 |
T |
|
| Q |
768 |
tgctttgta |
776 |
Q |
| |
|
||||||||| |
|
|
| T |
31532941 |
tgctttgta |
31532949 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 494 - 788
Target Start/End: Complemental strand, 33305097 - 33304798
Alignment:
| Q |
494 |
gagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccacttttaaagatgaacttatccaatgatccttt |
593 |
Q |
| |
|
|||||||||| | ||||||||||| | ||| ||||||||||||| |||||||||||||||| |||||||| || |||||||||||||||||||||||| |
|
|
| T |
33305097 |
gagcaatgcctgtagcaatttggtacattgtgttccaatccaaatcacaaatagcatcaggagatccacttatatggatgaacttatccaatgatccttt |
33304998 |
T |
|
| Q |
594 |
ggacatgaattcatatattagtgctcttttgttctcataacaaaatcccaaaagtgagacgatgttcatat-----gtgacgttctactaatgctagcaa |
688 |
Q |
| |
|
|| ||||||||||||||| || ||||||||||||||||||||||| |||||||||||||| ||||||| || |||||||||||||||||||||||| |
|
|
| T |
33304997 |
gggcatgaattcatatatcagagctcttttgttctcataacaaaaacccaaaagtgagacaatgttcacatgtgacgtgacgttctactaatgctagcaa |
33304898 |
T |
|
| Q |
689 |
cttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaagcttgctttgtacacaacaccata |
788 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||| ||||| | ||||||||| |||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
33304897 |
cttcatttataaattcttctccatttcccttggactcttttattactttcactgccacttgacgaccatcaggtaagcttgctttgtacacaacaccata |
33304798 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 173; E-Value: 1e-92
Query Start/End: Original strand, 468 - 788
Target Start/End: Complemental strand, 31572793 - 31572473
Alignment:
| Q |
468 |
tccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccactttta |
567 |
Q |
| |
|
|||||| ||||||||||| ||||||| ||| ||||| ||||||||| |||| || || ||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
31572793 |
tccttgttgcaagtattcgagtcctctagctatgcctattgcaattcggtacaacgtgttccaatccaaattacaaagtgcactaggaaatccactttta |
31572694 |
T |
|
| Q |
568 |
aagatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgttctcataacaaaatcccaaaagtgagacgatgttcatatgtg |
667 |
Q |
| |
|
||||||||||| || | ||| || || | ||||||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||||| ||||| |
|
|
| T |
31572693 |
aagatgaacttgtctagtgaaccatttggcatgaattcatatattagtgctcttttgttctcataacagaaacccaaaagtgagacaatgttcacatgtg |
31572594 |
T |
|
| Q |
668 |
acgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaagct |
767 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||| |||||| || |||||||| | ||| || || ||||||| |||||| ||||| || |
|
|
| T |
31572593 |
atgttctactaatgctagcaacttcatttatgaattcttctccatctcccttagattcgtttattactttaaccgccacttgacaaccatcaggtaaact |
31572494 |
T |
|
| Q |
768 |
tgctttgtacacaacaccata |
788 |
Q |
| |
|
|||||||||||| |||||||| |
|
|
| T |
31572493 |
tgctttgtacacgacaccata |
31572473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 167; E-Value: 5e-89
Query Start/End: Original strand, 150 - 471
Target Start/End: Original strand, 31532102 - 31532426
Alignment:
| Q |
150 |
taacaaattgctagaagacacatgtgaagtttgtaatgatgacatttgaggagaatataagaaaggctttggaggataaggcactgactgaagtggtcct |
249 |
Q |
| |
|
||||| |||||| |||||||||| ||||||||||| ||||| |||| |||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
31532102 |
taacatattgctggaagacacatatgaagtttgtactgatggaattttaggagaatataagaaaggctttggaggatatggcactgactgaagtggtcct |
31532201 |
T |
|
| Q |
250 |
tgtagcatttctattactctattcatagatggtctatctaatggatttgtttgaatgcaccatagactaaccatagtaatctttcttaccgtatcatttt |
349 |
Q |
| |
|
|||||||||||| ||||| || |||| ||||||||||| |||| ||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||| |
|
|
| T |
31532202 |
tgtagcatttctgttactttactcattgatggtctatcggatgggtttgtttgaatgcaccataaactcaccatagtaatctttctcaccatatcatttt |
31532301 |
T |
|
| Q |
350 |
cttcctttgagattactaaacaatctacattgttattatt---tagctcgagatccttataaattcaatcaggaaagaacatttcagaagtacatgaccc |
446 |
Q |
| |
|
|||||| ||| || ||||| ||| ||| ||||||||| | | || |||||||||||||| || ||||||||| |||||||||||||||||||||| |
|
|
| T |
31532302 |
cttcctctgaattttctaaataattcacaaggttattattaccttgttcaagatccttataaatccagtcaggaaagtacatttcagaagtacatgaccc |
31532401 |
T |
|
| Q |
447 |
tccaatgtcattattctttcttcct |
471 |
Q |
| |
|
|||| |||||| ||||||||||||| |
|
|
| T |
31532402 |
tccagtgtcataattctttcttcct |
31532426 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 117 - 470
Target Start/End: Complemental strand, 31573389 - 31573036
Alignment:
| Q |
117 |
atcattcttcagttaaggtattgagtttttctctaacaaattgctagaagacacatgtgaagtttgtaatgatgacatttgaggagaatataagaaaggc |
216 |
Q |
| |
|
||||||||||||| | | |||||| |||||||||||||||||||| |||||| ||| |||| |||||||||||| ||||| ||||||||||| | |||| |
|
|
| T |
31573389 |
atcattcttcagtaatgttattgaatttttctctaacaaattgctggaagacgcatatgaactttgtaatgatggcattttaggagaatatagaataggc |
31573290 |
T |
|
| Q |
217 |
tttggaggataaggcactgactgaagtggtccttgtagcatttctattactctattcatagatggtctatctaatggatttgtttgaatgcaccatagac |
316 |
Q |
| |
|
|||||||| || |||||||| | ||||||||||||||||||||||| |||| || |||| ||||||||||||||||| || ||||||||||||||||||| |
|
|
| T |
31573289 |
tttggagggtatggcactgaatcaagtggtccttgtagcatttctaatactttactcatcgatggtctatctaatgggttcgtttgaatgcaccatagac |
31573190 |
T |
|
| Q |
317 |
taaccatagtaatctttcttaccgtatcattttcttcctttgagattactaaacaatctacattgttattatttagctcgagatccttataaattcaatc |
416 |
Q |
| |
|
|||||||||| | |||||||||| ||||| ||||||||| ||| || |||||| || ||| ||||||| ||||||| ||||| |||||||| ||||| |
|
|
| T |
31573189 |
taaccatagttaactttcttaccatatcagtttcttcctcggagtttgctaaaccattcacaaagttattacttagctcaagatcattataaatccaatc |
31573090 |
T |
|
| Q |
417 |
aggaaagaacatttcagaagtacatgaccctccaatgtcattattctttcttcc |
470 |
Q |
| |
|
|||||| |||||||||||||||| |||||||| |||||| ||||||||||| |
|
|
| T |
31573089 |
tggaaagtacatttcagaagtacacgaccctcctgtgtcatagttctttcttcc |
31573036 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 468 - 788
Target Start/End: Original strand, 31576276 - 31576599
Alignment:
| Q |
468 |
tccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccactttta |
567 |
Q |
| |
|
|||||| |||||||| ||||| |||| ||||||||||||||| |||||| | || || |||||||| |||| ||||||||| | ||||||| |||||||| |
|
|
| T |
31576276 |
tccttggtgcaagtactctagacctctagcaatgccaattgctatttggaacaaagtgttccaatcaaaatcacaaatagcgttaggaaattcactttta |
31576375 |
T |
|
| Q |
568 |
aagatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgt---tctcataacaaaatcccaaaagtgagacgatgttcatat |
664 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| || ||||| || || |||||||| | |
|
|
| T |
31576376 |
tagatgaacttatccaatgatccattgggcatgaattcatatattagtgctcttttgtccacctcataacaaaagcctaaaagggacacaatgttcatgt |
31576475 |
T |
|
| Q |
665 |
gtgacgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaa |
764 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| | |||||| || |||||||||||||| ||| |
|
|
| T |
31576476 |
gtgatgttcgactaatgctagcaacttcatttatgaattcttctccatttcctttggattcatttattactttcaccgccacttgacgaccatcaattaa |
31576575 |
T |
|
| Q |
765 |
gcttgctttgtacacaacaccata |
788 |
Q |
| |
|
||||||||||| ||||||||||| |
|
|
| T |
31576576 |
acttgctttgtaaacaacaccata |
31576599 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 468 - 788
Target Start/End: Original strand, 31604942 - 31605265
Alignment:
| Q |
468 |
tccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccactttta |
567 |
Q |
| |
|
|||||| |||||||| ||||| |||| ||||||||||||||| |||||| | || || |||||||| |||| ||||||||| | ||||||| |||||||| |
|
|
| T |
31604942 |
tccttggtgcaagtactctagacctctagcaatgccaattgctatttggaacaaagtgttccaatcaaaatcacaaatagcgttaggaaattcactttta |
31605041 |
T |
|
| Q |
568 |
aagatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgt---tctcataacaaaatcccaaaagtgagacgatgttcatat |
664 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||||||||||||||||||||||| |||||||||||| || ||||| || || |||||||| | |
|
|
| T |
31605042 |
tagatgaacttatccaatgatccattgggcatgaattcatatattagtgctcttttgtccacctcataacaaaagcctaaaagggacacaatgttcatgt |
31605141 |
T |
|
| Q |
665 |
gtgacgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaa |
764 |
Q |
| |
|
|||| |||| |||||||||||||||||||||||||||||||||||||||||| ||||| || ||||| | |||||| || |||||||||||||| ||| |
|
|
| T |
31605142 |
gtgatgttcgactaatgctagcaacttcatttatgaattcttctccatttcctttggattcatttattactttcaccgccacttgacgaccatcaattaa |
31605241 |
T |
|
| Q |
765 |
gcttgctttgtacacaacaccata |
788 |
Q |
| |
|
||||||||||| ||||||||||| |
|
|
| T |
31605242 |
acttgctttgtaaacaacaccata |
31605265 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 153; E-Value: 1e-80
Query Start/End: Original strand, 473 - 788
Target Start/End: Original strand, 31614815 - 31615133
Alignment:
| Q |
473 |
gatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccacttttaaagat |
572 |
Q |
| |
|
|||||||||| ||||| |||| ||| |||||||||||||||||| | || || ||||||| |||| ||||||||||| ||||||| ||||||| |||| |
|
|
| T |
31614815 |
gatgcaagtactctagacctctagcgatgccaattgcaatttggaacaaagtgttccaattaaaatcacaaatagcattaggaaattcacttttgtagat |
31614914 |
T |
|
| Q |
573 |
gaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgtt---ctcataacaaaatcccaaaagtgagacgatgttcatatgtgac |
669 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| || ||||| || || |||||||| ||| | |
|
|
| T |
31614915 |
gaaactatccaatgatcctttggacatgaattcatatattagtgctcttttgttcacctcataacaaaagcctaaaagggatacaatgttcatgtgtaat |
31615014 |
T |
|
| Q |
670 |
gttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaagcttg |
769 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||| | |||||| || || ||||||||||| ||| |||| |
|
|
| T |
31615015 |
gttcgactaatgctagcaacttcatttatgaattcttctccatttccctttgactcatttagtactttcaccgccacatgacgaccatcaattaaacttg |
31615114 |
T |
|
| Q |
770 |
ctttgtacacaacaccata |
788 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
31615115 |
ctttgtacacaacaccata |
31615133 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 151; E-Value: 2e-79
Query Start/End: Original strand, 468 - 789
Target Start/End: Original strand, 31618546 - 31618870
Alignment:
| Q |
468 |
tccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccactttta |
567 |
Q |
| |
|
||||||||||||||| ||||| ||| ||||||||||||||||||| | | || || |||||||| |||| |||||| |||| ||||||| ||||||| |
|
|
| T |
31618546 |
tccttgatgcaagtactctagacctttagcaatgccaattgcaattcgaaacaaagtgttccaatcaaaatcacaaatggcattaggaaattcacttttg |
31618645 |
T |
|
| Q |
568 |
aagatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgttctcat---aacaaaatcccaaaagtgagacgatgttcatat |
664 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | ||||| |||| ||||| || || |||||||||| |
|
|
| T |
31618646 |
tagatgaacttatccaatgatcctttgggcatgaattcatatattagcgctcttttgttctcttcgtaacaatatcctaaaagcgacacaatgttcatat |
31618745 |
T |
|
| Q |
665 |
gtgacgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaa |
764 |
Q |
| |
|
|||| || ||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| | ||||||||| |||||||||| || ||| |
|
|
| T |
31618746 |
gtgatgtcctactaatgctagcaacttcatttatgaattcttctccatttccctttgtctcgcttattactttcactgccacttgacgactattatataa |
31618845 |
T |
|
| Q |
765 |
gcttgctttgtacacaacaccatac |
789 |
Q |
| |
|
||||||||||| |||||||||||| |
|
|
| T |
31618846 |
acttgctttgtagacaacaccatac |
31618870 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 145; E-Value: 7e-76
Query Start/End: Original strand, 469 - 788
Target Start/End: Complemental strand, 31438968 - 31438646
Alignment:
| Q |
469 |
ccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccacttttaa |
568 |
Q |
| |
|
|||||||| ||||| |||||||||| |||||||| ||||||||| ||| | | ||| ||||||||||||| ||||||||||| ||||||||||||||| |
|
|
| T |
31438968 |
ccttgatgtaagtactctagtcctctagcaatgctaattgcaatatggaacattgtgttccaatccaaatcacaaatagcatttggaaatccacttttat |
31438869 |
T |
|
| Q |
569 |
agatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgttc---tcataacaaaatcccaaaagtgagacgatgttcatatg |
665 |
Q |
| |
|
| ||||||||||| ||||| || |||||||||||||||||||| | ||| ||||||||| ||||||||||| |||||||||||||| ||||||| ||| |
|
|
| T |
31438868 |
atatgaacttatctaatgacccattggacatgaattcatatatcaatgcacttttgttcttttcataacaaaaacccaaaagtgagacaatgttcacatg |
31438769 |
T |
|
| Q |
666 |
tgacgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaag |
765 |
Q |
| |
|
||| ||| |||| ||||| |||||||||||||| ||||||||||| | ||||||| |||| |||| | |||||| || || ||||| ||||| ||||| |
|
|
| T |
31438768 |
tgatgttttacttatgcttgcaacttcatttataaattcttctccgtctcccttgcactcacttattactttcaccgcaacatgacggccatcaggtaaa |
31438669 |
T |
|
| Q |
766 |
cttgctttgtacacaacaccata |
788 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
31438668 |
cttgctttgtacacaacaccata |
31438646 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #13
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 468 - 788
Target Start/End: Original strand, 31595333 - 31595656
Alignment:
| Q |
468 |
tccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccactttta |
567 |
Q |
| |
|
||||||||||||||| |||| |||| ||||||||| || ||||||||| | || || ||| |||| |||| ||||| ||| |||||||||||||||||| |
|
|
| T |
31595333 |
tccttgatgcaagtactctaaacctctagcaatgccgatagcaatttggaacaaagtgttcgaatcaaaatcacaaacagcgtcaggaaatccactttta |
31595432 |
T |
|
| Q |
568 |
aagatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgtt---ctcataacaaaatcccaaaagtgagacgatgttcatat |
664 |
Q |
| |
|
||||||| || || | ||||||||||| |||||| |||||||||||||||||||| || ||| |||||| | || |||||||| || |||||||| | |
|
|
| T |
31595433 |
tagatgaatttgtctagtgatcctttgggcatgaactcatatattagtgctcttttatttgcctcgtaacaataacctaaaagtgacacaatgttcatgt |
31595532 |
T |
|
| Q |
665 |
gtgacgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaa |
764 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||| ||||| |||||||| || ||||||||||| | ||||||||| |||||||||||||| | ||| |
|
|
| T |
31595533 |
gtgatgttctactgatgctagcaacttcatttatgaactcttccccatttccttttgactcgtttattactttcactgccacttgacgaccatccgttaa |
31595632 |
T |
|
| Q |
765 |
gcttgctttgtacacaacaccata |
788 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
31595633 |
acttgctttgtacacaacaccata |
31595656 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #14
Raw Score: 142; E-Value: 4e-74
Query Start/End: Original strand, 468 - 788
Target Start/End: Original strand, 31608536 - 31608859
Alignment:
| Q |
468 |
tccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccactttta |
567 |
Q |
| |
|
||||||||||||||| || || |||| ||||||||| || |||| |||| | || || |||||||| |||| ||||| ||| |||||||||||||| ||| |
|
|
| T |
31608536 |
tccttgatgcaagtactcgagacctctagcaatgccgatagcaacttggaacaaagtgttccaatcaaaatcacaaacagcgtcaggaaatccactctta |
31608635 |
T |
|
| Q |
568 |
aagatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgttc---tcataacaaaatcccaaaagtgagacgatgttcatat |
664 |
Q |
| |
|
||||||||||||||| |||||||||| |||| ||||||||||||| |||||||| ||| ||||||||||| || || ||||| || ||||||| | |
|
|
| T |
31608636 |
tagatgaacttatccagggatcctttgggcatgtattcatatattagcgctcttttattcacctcataacaaaaacctaagagtgacacaatgttcaggt |
31608735 |
T |
|
| Q |
665 |
gtgacgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaa |
764 |
Q |
| |
|
|||| |||||||| ||||||||||||||||||||||| ||||| |||||||| || ||||||||||| | ||||||||| |||||||||||||| | ||| |
|
|
| T |
31608736 |
gtgatgttctactgatgctagcaacttcatttatgaactcttccccatttccttttgactcgtttattactttcactgccacttgacgaccatccgttaa |
31608835 |
T |
|
| Q |
765 |
gcttgctttgtacacaacaccata |
788 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
31608836 |
acttgctttgtacacaacaccata |
31608859 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #15
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 152 - 470
Target Start/End: Complemental strand, 33305666 - 33305351
Alignment:
| Q |
152 |
acaaattgctagaagacacatgtgaagtttgtaatgatgacatttgaggagaatataagaaaggctttggaggataaggcactgactgaagtggtccttg |
251 |
Q |
| |
|
|||||||| | |||||||||| |||| |||||||||||| | ||| |||||| ||||||||||| ||||| ||||| ||||||||| |||||||||||| |
|
|
| T |
33305666 |
acaaattgttggaagacacatatgaaatttgtaatgatggcctttcaggagagtataagaaaggttttgggggatatggcactgacccaagtggtccttg |
33305567 |
T |
|
| Q |
252 |
tagcatttctattactctattcatagatggtctatctaatggatttgtttgaatgcaccatagactaaccatagtaatctttcttaccgtatcattttct |
351 |
Q |
| |
|
||||||||||| ||| || |||| |||||||||||| ||||||| |||||||||||||| ||||||| |||||||||||||||| || ||||||||||| |
|
|
| T |
33305566 |
aagcatttctatcactttactcattgatggtctatctgatggattcgtttgaatgcaccaaagactaatcatagtaatctttcttgccatatcattttct |
33305467 |
T |
|
| Q |
352 |
tcctttgagattactaaacaatctacattgttattatttagctcgagatccttataaattcaatcaggaaagaacatttcagaagtacatgaccctccaa |
451 |
Q |
| |
|
|| | |||| || | |||||| | ||||||| ||||||| |||||||||||||| ||||| | |||| ||||||| || |||||||||||||| |
|
|
| T |
33305466 |
tcttctgagtttgcagaacaat---taaggttattacttagctcaagatccttataaatccaatctgaaaagtacatttccgatgtacatgaccctcccg |
33305370 |
T |
|
| Q |
452 |
tgtcattattctttcttcc |
470 |
Q |
| |
|
|||||| |||||||||||| |
|
|
| T |
33305369 |
tgtcataattctttcttcc |
33305351 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #16
Raw Score: 122; E-Value: 4e-62
Query Start/End: Original strand, 468 - 788
Target Start/End: Original strand, 31585686 - 31586009
Alignment:
| Q |
468 |
tccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccactttta |
567 |
Q |
| |
|
|||||||||||| || |||| |||| ||||||||||| |||||||||| | || || |||||||| |||| | | ||||||| ||||||| ||| || |
|
|
| T |
31585686 |
tccttgatgcaaatactctaaacctctagcaatgccaactgcaatttggaacaaagtgttccaatcaaaatcatatatagcattaggaaattggcttcta |
31585785 |
T |
|
| Q |
568 |
aagatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgttc---tcataacaaaatcccaaaagtgagacgatgttcatat |
664 |
Q |
| |
|
|||| |||||| ||||||||||||||||||||||||||||||| | ||||||||||||| ||||| ||||| || |||||||| || ||||| || | |
|
|
| T |
31585786 |
tagataaacttacccaatgatcctttggacatgaattcatatatcaatgctcttttgttcacctcatagcaaaagcctaaaagtgatacaatgttgatgt |
31585885 |
T |
|
| Q |
665 |
gtgacgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaa |
764 |
Q |
| |
|
|||| |||||||||||||||| ||||||||||||||||||||||||||||||||| | || ||||| | |||||| || || ||||||||||| ||| |
|
|
| T |
31585886 |
gtgatgttctactaatgctagaaacttcatttatgaattcttctccatttcccttagtttcatttattactttcaccgccacatgacgaccatcacttaa |
31585985 |
T |
|
| Q |
765 |
gcttgctttgtacacaacaccata |
788 |
Q |
| |
|
| ||||||||||||||||||||| |
|
|
| T |
31585986 |
acatgctttgtacacaacaccata |
31586009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #17
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 244 - 471
Target Start/End: Original strand, 31594857 - 31595084
Alignment:
| Q |
244 |
ggtccttgtagcatttctattactctattcatagatggtctatctaatggatttgtttgaatgcaccatagactaaccatagtaatctttcttaccgtat |
343 |
Q |
| |
|
||||||||||||||||| |||||| ||||||| | |||||||||||||||||||||||||||||||||||| || ||||||||||||||| | ||| ||| |
|
|
| T |
31594857 |
ggtccttgtagcatttcaattactttattcattggtggtctatctaatggatttgtttgaatgcaccataggctcaccatagtaatctttttaaccatat |
31594956 |
T |
|
| Q |
344 |
cattttcttcctttgagattactaaacaatctacattgttattatttagctcgagatccttataaattcaatcaggaaagaacatttcagaagtacatga |
443 |
Q |
| |
|
|||||||||||| ||| ||| ||| ||| || | | |||| | |||| |||||||||||||| || || |||||| |||||||||||||||| || |
|
|
| T |
31594957 |
cattttcttcctctgaaattgtcaaagaatttaaaagatcattaccttgctcaagatccttataaatccagtctggaaagtacatttcagaagtacacga |
31595056 |
T |
|
| Q |
444 |
ccctccaatgtcattattctttcttcct |
471 |
Q |
| |
|
||||||| | | || |||||||||||| |
|
|
| T |
31595057 |
ccctccagtttgatagttctttcttcct |
31595084 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #18
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 202 - 449
Target Start/End: Original strand, 31618028 - 31618275
Alignment:
| Q |
202 |
gaatataagaaaggctttggaggataaggcactgactgaagtggtccttgtagcatttctattactctattcatagatggtctatctaatggatttgttt |
301 |
Q |
| |
|
|||||||||| ||||||||||||||| | || || |||||||||||| | ||||||||||||| ||||||| | |||||||||| |||| || |||| |
|
|
| T |
31618028 |
gaatataagacaggctttggaggatatgataccgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctatctgatggtttagttt |
31618127 |
T |
|
| Q |
302 |
gaatgcaccatagactaaccatagtaatctttcttaccgtatcattttcttcctttgagattactaaacaatctacattgttattatttagctcgagatc |
401 |
Q |
| |
|
|||||||||||||||| |||| |||||||||||| | | ||||||||||||||| |||||| | |||||| || | |||| | |||| ||||| |
|
|
| T |
31618128 |
gaatgcaccatagactcaccaaagtaatctttctgatcatatcattttcttcctccgagattgttgaacaatttaaaagagtattcccttgctcaagatc |
31618227 |
T |
|
| Q |
402 |
cttataaattcaatcaggaaagaacatttcagaagtacatgaccctcc |
449 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||||||||||||||||||| |
|
|
| T |
31618228 |
cttataaatccaatctggaaagtacatttcagaagtacatgaccctcc |
31618275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #19
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 202 - 471
Target Start/End: Original strand, 31614299 - 31614568
Alignment:
| Q |
202 |
gaatataagaaaggctttggaggataaggcactgactgaagtggtccttgtagcatttctattactctattcatagatggtctatctaatggatttgttt |
301 |
Q |
| |
|
|||| |||||| || ||||||||||| | ||| || |||||||||||| | ||||||||||||| ||||||| | |||||| |||||||| || |||| |
|
|
| T |
31614299 |
gaatgtaagaagggatttggaggatatgacaccgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctgtctaatggtttagttt |
31614398 |
T |
|
| Q |
302 |
gaatgcaccatagactaaccatagtaatctttcttaccgtatcattttcttcctttgagattactaaacaatctacattgttattatttagctcgagatc |
401 |
Q |
| |
|
|||||||||| | ||| |||| ||| |||||||| | | ||||||||||||||| ||||||| ||||||| || | | |||||| |||| |||| |
|
|
| T |
31614399 |
gaatgcaccaaacactcaccaaagtgatctttctaatcatatcattttcttcctctgagattgtcaaacaatttaaaagagtgttattttgctcaagatt |
31614498 |
T |
|
| Q |
402 |
cttataaattcaatcaggaaagaacatttcagaagtacatgaccctccaatgtcattattctttcttcct |
471 |
Q |
| |
|
||||||||| ||||| |||||| ||||||||||||| |||||||||||| |||||| |||||||||||| |
|
|
| T |
31614499 |
cttataaatccaatctggaaagtacatttcagaagtgcatgaccctccagtgtcatagttctttcttcct |
31614568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #20
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 199 - 353
Target Start/End: Complemental strand, 31439490 - 31439336
Alignment:
| Q |
199 |
ggagaatataagaaaggctttggaggataaggcactgactgaagtggtccttgtagcatttctattactctattcatagatggtctatctaatggatttg |
298 |
Q |
| |
|
|||||| |||||| |||||||||||||| || | ||| |||||||||||||||||||||||||||||| || |||| |||||||| ||| ||||||||| |
|
|
| T |
31439490 |
ggagaaaataagacgggctttggaggatacggtattgaatgaagtggtccttgtagcatttctattactttactcattgatggtctctctgatggatttg |
31439391 |
T |
|
| Q |
299 |
tttgaatgcaccatagactaaccatagtaatctttcttaccgtatcattttcttc |
353 |
Q |
| |
|
||||||||||||||| ||| |||||||||||||| |||| ||||||||||||| |
|
|
| T |
31439390 |
tttgaatgcaccataaactcaccatagtaatcttctttacgatatcattttcttc |
31439336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #21
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 199 - 455
Target Start/End: Original strand, 31608012 - 31608271
Alignment:
| Q |
199 |
ggagaatataagaaaggctttggaggataaggcactgactga-agtggtccttgtagcatttctattactctattcatagatggtctatctaatggattt |
297 |
Q |
| |
|
|||||| |||||| |||||||||||||| | |||||| ||| || |||||||| | ||||||||||||| ||||||| | |||||||||| ||||||| |
|
|
| T |
31608012 |
ggagaaaataagaccggctttggaggatatgacactga-tgacagcggtccttgcaacatttctattactttattcattggtggtctatctgatggattc |
31608110 |
T |
|
| Q |
298 |
gtttgaatgcaccatagactaaccatagtaatctttcttaccgtatcattttcttcctttgagattactaaacaatct---acattgttattatttagct |
394 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||| ||| |||||||||||||| |||||||| || | || | ||| | | ||| | ||| |
|
|
| T |
31608111 |
gtttgaatgcaccatagactcaccatagtaatctttctaaccatatcattttcttccgttgagattgtcaacccatttaaaacagtatggttaccttgct |
31608210 |
T |
|
| Q |
395 |
cgagatccttataaattcaatcaggaaagaacatttcagaagtacatgaccctccaatgtc |
455 |
Q |
| |
|
| |||||||||||||| || || |||||| |||||||||||||||||||||| ||| |||| |
|
|
| T |
31608211 |
caagatccttataaatccagtctggaaagtacatttcagaagtacatgacccgccagtgtc |
31608271 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #22
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 200 - 449
Target Start/End: Original strand, 31585163 - 31585415
Alignment:
| Q |
200 |
gagaatataagaaaggctttggaggataaggcactgactgaagtggtccttgtagcatttctattactctattcatagatggtctatctaatggatttgt |
299 |
Q |
| |
|
||||| |||||| |||||||||||||| |||||||| |||||||||||| | ||||||||||||| ||||||| | |||||| || ||||||| || |
|
|
| T |
31585163 |
gagaaaataagacgggctttggaggatatggcactgatgaaagtggtccttgcaacatttctattactttattcatcggtggtctgtccgatggattcgt |
31585262 |
T |
|
| Q |
300 |
ttgaatgcaccatagactaaccatagtaatctttcttaccgtatcattttcttcctttgagattactaaacaatctaca--ttgtt-attatttagctcg |
396 |
Q |
| |
|
|||||||||||||||||| ||||||||||||||||| ||| | ||||||||||| | |||||| ||||||| || | ||| |||| | |||| |
|
|
| T |
31585263 |
ttgaatgcaccatagacttaccatagtaatctttctaaccatgtcattttcttcttcggagattgtcaaacaatttaaaagaggttcattaccttgctca |
31585362 |
T |
|
| Q |
397 |
agatccttataaattcaatcaggaaagaacatttcagaagtacatgaccctcc |
449 |
Q |
| |
|
|||||||||||||| ||||| |||||| |||||||||||| |||||| ||||| |
|
|
| T |
31585363 |
agatccttataaatccaatctggaaagtacatttcagaagcacatgaacctcc |
31585415 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #23
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 198 - 355
Target Start/End: Original strand, 31575751 - 31575908
Alignment:
| Q |
198 |
aggagaatataagaaaggctttggaggataaggcactgactgaagtggtccttgtagcatttctattactctattcatagatggtctatctaatggattt |
297 |
Q |
| |
|
||||||| |||||| ||||||||||||||| | ||| || |||||||||||| | ||||||||||||| ||||||| | ||| || |||||||| || |
|
|
| T |
31575751 |
aggagaaaataagacaggctttggaggatatgacaccgaggaaagtggtccttgcaacatttctattactttattcatcggtggcctgtctaatggtttg |
31575850 |
T |
|
| Q |
298 |
gtttgaatgcaccatagactaaccatagtaatctttcttaccgtatcattttcttcct |
355 |
Q |
| |
|
|||||||| ||||||||||| |||| |||||||||||| ||| ||||||||||||||| |
|
|
| T |
31575851 |
gtttgaatacaccatagactcaccaaagtaatctttctaaccatatcattttcttcct |
31575908 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #24
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 240 - 455
Target Start/End: Original strand, 31604462 - 31604677
Alignment:
| Q |
240 |
aagtggtccttgtagcatttctattactctattcatagatggtctatctaatggatttgtttgaatgcaccatagactaaccatagtaatctttcttacc |
339 |
Q |
| |
|
|||||||||||| | ||||||||||||| ||||||| | |||||||||| || | || |||||||||| ||| ||||| |||| |||||||||||| ||| |
|
|
| T |
31604462 |
aagtggtccttgcaacatttctattactttattcatcggtggtctatctgatagtttagtttgaatgcgccacagactcaccaaagtaatctttctgacc |
31604561 |
T |
|
| Q |
340 |
gtatcattttcttcctttgagattactaaacaatctacattgttattatttagctcgagatccttataaattcaatcaggaaagaacatttcagaagtac |
439 |
Q |
| |
|
||||||||||||||| |||| | |||||| || | ||||| | |||| |||||||||||||| ||||| |||||| ||||||||||||||| |
|
|
| T |
31604562 |
atatcattttcttcctccgagactgtcgaacaatttaaaagagtattaccttgctcaagatccttataaatccaatctggaaagtacatttcagaagtac |
31604661 |
T |
|
| Q |
440 |
atgaccctccaatgtc |
455 |
Q |
| |
|
||||||| ||| |||| |
|
|
| T |
31604662 |
atgacccgccagtgtc |
31604677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 586 - 782
Target Start/End: Original strand, 32351696 - 32351897
Alignment:
| Q |
586 |
gatcctttggacatgaattcatatattagtgct-----cttttgttctcataacaaaatcccaaaagtgagacgatgttcatatgtgacgttctactaat |
680 |
Q |
| |
|
||||||||||| ||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||| || ||||||| |||||| |||||| |||| |
|
|
| T |
32351696 |
gatcctttggaaatgaagtcatagattagtgctttttaattttgttctcataacaaaaacccaaaagtgaaacaatgttcacatgtgaggttctagtaat |
32351795 |
T |
|
| Q |
681 |
gctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaagcttgctttgtacaca |
780 |
Q |
| |
|
||| | |||||||||||||| |||| ||||| |||||| || || ||||| |||||||| |||||||| ||| ||| |||||||| ||||||||| |
|
|
| T |
32351796 |
tctatctacttcatttatgaaatcttttccatctccctttgaatcatttattattttcacctctacttgatgactatcacgtaagcttatattgtacaca |
32351895 |
T |
|
| Q |
781 |
ac |
782 |
Q |
| |
|
|| |
|
|
| T |
32351896 |
ac |
32351897 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #26
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 468 - 783
Target Start/End: Complemental strand, 21898236 - 21897921
Alignment:
| Q |
468 |
tccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccactttta |
567 |
Q |
| |
|
||||||||||||||| || ||||| ||| ||||| |||||||||| | | || |||| ||||||| | || ||| ||||||||| |||| | || |
|
|
| T |
21898236 |
tccttgatgcaagtagtccagtcccttagcgatgcctattgcaattttacacatggtgttcctatccaaactgcatataccatcaggaagtccagtgttc |
21898137 |
T |
|
| Q |
568 |
aagatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgttctcataacaaaatcccaaaagtgagacgatgttcatatgtg |
667 |
Q |
| |
|
| ||||| |||||||| |||||||||| |||||||||||| || |||||| |||||| ||| | ||||| ||||||||||| || ||||||| ||| | |
|
|
| T |
21898136 |
attatgaatttatccaaagatcctttggtcatgaattcataaatgagtgctattttgtgctcgcagcaaaaccccaaaagtgacacaatgttcacatggg |
21898037 |
T |
|
| Q |
668 |
acgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaagct |
767 |
Q |
| |
|
||||||||||| || | | |||||| || || |||| ||||| | |||| || ||||| || ||||| |||||| |||||||||| |||||||| |
|
|
| T |
21898036 |
cggttctactaatactgtctagttcattcataaaatcttgtccatctgcctttccatcatttattatcttcacagctactggacgaccatctggtaagct |
21897937 |
T |
|
| Q |
768 |
tgctttgtacacaaca |
783 |
Q |
| |
|
||||||||| |||||| |
|
|
| T |
21897936 |
tgctttgtagacaaca |
21897921 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 570 - 701
Target Start/End: Complemental strand, 32355941 - 32355802
Alignment:
| Q |
570 |
gatgaacttatccaatgatcctttggacatga---attcatatattagtgctcttt-----tgttctcataacaaaatcccaaaagtgagacgatgttca |
661 |
Q |
| |
|
||||| |||||||||||||||||||||||||| | ||||| ||||||||| ||| |||||||||||||||| ||||||||||| || ||||||| |
|
|
| T |
32355941 |
gatgatcttatccaatgatcctttggacatgatgaagtcataaattagtgctttttaattttgttctcataacaaaaacccaaaagtgaaacaatgttca |
32355842 |
T |
|
| Q |
662 |
tatgtgacgttctactaatgctagcaacttcatttatgaa |
701 |
Q |
| |
|
||||||| ||| ||| ||| ||| | |||||||||||||| |
|
|
| T |
32355841 |
tatgtgaggttttaccaattctatctacttcatttatgaa |
32355802 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 392 - 471
Target Start/End: Original strand, 31575948 - 31576027
Alignment:
| Q |
392 |
gctcgagatccttataaattcaatcaggaaagaacatttcagaagtacatgaccctccaatgtcattattctttcttcct |
471 |
Q |
| |
|
|||| |||||||||||||| ||||| ||||| ||||||| | |||||| ||||||||| |||||| ||||| |||||| |
|
|
| T |
31575948 |
gctcaagatccttataaatccaatctggaaaatacatttccggagtacacgaccctccagtgtcatagttcttccttcct |
31576027 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 727 - 780
Target Start/End: Complemental strand, 32355794 - 32355741
Alignment:
| Q |
727 |
tttatcattttcactgctacttgacgaccatcgggtaagcttgctttgtacaca |
780 |
Q |
| |
|
||||| |||||||| ||||||||||||||||| ||||||||| ||||||||| |
|
|
| T |
32355794 |
tttattattttcaccgctacttgacgaccatcacgtaagcttgaattgtacaca |
32355741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 158; Significance: 1e-83; HSPs: 2)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 158; E-Value: 1e-83
Query Start/End: Original strand, 468 - 788
Target Start/End: Complemental strand, 52174263 - 52173940
Alignment:
| Q |
468 |
tccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccactttta |
567 |
Q |
| |
|
||||||||||||||| ||||||||| |||||||||||||||||||||| | || || ||||||| |||| ||||| ||| |||| ||||||||||||| |
|
|
| T |
52174263 |
tccttgatgcaagtactctagtcctttagcaatgccaattgcaatttggaacaaagtgttccaattaaaatcacaaacagcttcagaaaatccactttta |
52174164 |
T |
|
| Q |
568 |
aagatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttgtt---ctcataacaaaatcccaaaagtgagacgatgttcatat |
664 |
Q |
| |
|
||||||||| |||||||||||||| | |||||||||||||||||||||||||||||| |||||||||| | || |||||||| || ||||||| | |
|
|
| T |
52174163 |
tagatgaactgatccaatgatccttggcgcatgaattcatatattagtgctcttttgttcacctcataacaatagcctaaaagtgacacaatgttcacgt |
52174064 |
T |
|
| Q |
665 |
gtgacgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaa |
764 |
Q |
| |
|
|||| ||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||| | ||| || || |||||||||||||| ||||| |
|
|
| T |
52174063 |
gtgatgttctactaatgctagcaacttcatttatgaattcttctccatccccctttaactcgtttattactttaacagccacttgacgaccatcaggtaa |
52173964 |
T |
|
| Q |
765 |
gcttgctttgtacacaacaccata |
788 |
Q |
| |
|
||||||||||| ||||||||||| |
|
|
| T |
52173963 |
acttgctttgtatacaacaccata |
52173940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 214 - 471
Target Start/End: Complemental strand, 52174769 - 52174512
Alignment:
| Q |
214 |
ggctttggaggataaggcactgactgaagtggtccttgtagcatttctattactctattcatagatggtctatctaatggatttgtttgaatgcaccata |
313 |
Q |
| |
|
|||||||||||||| |||||||| |||||| |||| | ||||||||||||| ||||||| ||||||||| |||| || |||||||||||||||| |
|
|
| T |
52174769 |
ggctttggaggatatggcactgatgaaagtggcccttccaacatttctattactttattcatctgtggtctatccgatggtttcgtttgaatgcaccata |
52174670 |
T |
|
| Q |
314 |
gactaaccatagtaatctttcttaccgtatcattttcttcctttgagattactaaacaatctacattgttattatttagctcgagatccttataaattca |
413 |
Q |
| |
|
|||| |||| |||||||||| | ||| ||||||||||||||| ||||||| ||||||| | | |||| | |||| |||||||||||||| || |
|
|
| T |
52174669 |
gactcaccaaagtaatctttataaccatatcattttcttcctctgagattgtcaaacaatttgaaagagtatttccttgctcaagatccttataaatcca |
52174570 |
T |
|
| Q |
414 |
atcaggaaagaacatttcagaagtacatgaccctccaatgtcattattctttcttcct |
471 |
Q |
| |
|
|| |||||| ||||||| |||||||||||||||||| |||||| |||||||||||| |
|
|
| T |
52174569 |
gtctggaaagtacatttctgaagtacatgaccctccagtgtcatagttctttcttcct |
52174512 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 149; Significance: 3e-78; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 149; E-Value: 3e-78
Query Start/End: Original strand, 469 - 788
Target Start/End: Complemental strand, 15063315 - 15062993
Alignment:
| Q |
469 |
ccttgatgcaagtattctagtcctcgagcaatgccaattgcaatttggtataatgttttccaatccaaattacaaatagcatcaggaaatccacttttaa |
568 |
Q |
| |
|
|||||||| || || ||||| |||||||||||||||||| | |||||| ||||||| ||||||||||||| ||||||||||| |||||||||||||| |
|
|
| T |
15063315 |
ccttgatgtaaatactctagacctcgagcaatgccaattacgatttggaataatgtgttccaatccaaatcacaaatagcatttggaaatccacttttgt |
15063216 |
T |
|
| Q |
569 |
agatgaacttatccaatgatcctttggacatgaattcatatattagtgctcttttg---ttctcataacaaaatcccaaaagtgagacgatgttcatatg |
665 |
Q |
| |
|
| ||||||||||| |||||||| |||||||||||||||||||| | |||||||||| |||||||||||||| ||||||||||| || | ||||||||| |
|
|
| T |
15063215 |
atatgaacttatctaatgatccattggacatgaattcatatatcaatgctcttttgttcttctcataacaaaaacccaaaagtgaaacaacgttcatatg |
15063116 |
T |
|
| Q |
666 |
tgacgttctactaatgctagcaacttcatttatgaattcttctccatttcccttggactcgtttatcattttcactgctacttgacgaccatcgggtaag |
765 |
Q |
| |
|
||| ||| | | ||||| |||||||||||||| ||||||||||| ||||||||| ||||| |||||| |||||| ||||| ||||| ||||| ||||| |
|
|
| T |
15063115 |
tgatgtttttgttatgcttgcaacttcatttataaattcttctccgtttcccttgcactcgcttatcactttcaccgctacatgacggccatcaggtaaa |
15063016 |
T |
|
| Q |
766 |
cttgctttgtacacaacaccata |
788 |
Q |
| |
|
|| |||||||| ||||||||||| |
|
|
| T |
15063015 |
ctggctttgtaaacaacaccata |
15062993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 199 - 363
Target Start/End: Complemental strand, 15063837 - 15063673
Alignment:
| Q |
199 |
ggagaatataagaaaggctttggaggataaggcactgactgaagtggtccttgtagcatttctattactctattcatagatggtctatctaatggatttg |
298 |
Q |
| |
|
|||||| |||||| ||||||||||||||| | | ||| |||||||| ||||| ||||||||||||||| || |||| |||||||| ||| ||||||| | |
|
|
| T |
15063837 |
ggagaaaataagataggctttggaggatattgtattgaatgaagtggcccttgcagcatttctattactttactcattgatggtctgtctgatggattcg |
15063738 |
T |
|
| Q |
299 |
tttgaatgcaccatagactaaccatagtaatctttcttaccgtatcattttcttcctttgagatt |
363 |
Q |
| |
|
||||||| ||||| | | |||||||||||||| ||| | ||||||||||||| | ||||||| |
|
|
| T |
15063737 |
tttgaatacaccacaaagccaccatagtaatcttctttagcatatcattttcttcttctgagatt |
15063673 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 161 - 359
Target Start/End: Original strand, 29083594 - 29083790
Alignment:
| Q |
161 |
tagaagacacatgtgaagtttgtaatgatgacatttgaggagaatataagaaaggctttggaggataaggcactgactgaagtggtccttgtagcatttc |
260 |
Q |
| |
|
||||| |||||| |||| ||||||| ||||| |||| | ||||||||||||| |||| || |||| | ||||||| |||| ||||||||| | |||| |
|
|
| T |
29083594 |
tagaaaacacatatgaactttgtaacgatgatatttcataagaatataagaaaaactttagaagatatgccactgacataagtcgtccttgtaacttttc |
29083693 |
T |
|
| Q |
261 |
tattactctattcatagatggtctatctaatggatttgtttgaatgcaccatagactaaccatagtaatctttcttaccgtatcattttcttcctttga |
359 |
Q |
| |
|
||||| | |||| |||||||||||| ||| | | ||||||||| || ||||||| | ||| ||||||| ||| ||| ||||||||||||||||||| |
|
|
| T |
29083694 |
tattatttc--tcattgatggtctatctcatgaaatcgtttgaatgtacgatagactcatcattgtaatctatctcaccatatcattttcttcctttga |
29083790 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 85; Significance: 4e-40; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 18 - 106
Target Start/End: Complemental strand, 10378639 - 10378551
Alignment:
| Q |
18 |
attttgaagttcaacggatatgtaaagttgtactaaattaccaacaatatacaatcacattttcgcttttgcattgctaagctttttcg |
106 |
Q |
| |
|
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10378639 |
attttgaagttcaacggatatgtaaagttgtactatattaccaacaatatacaatcacattttcgcttttgcattgctaagctttttcg |
10378551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0394 (Bit Score: 61; Significance: 9e-26; HSPs: 1)
Name: scaffold0394
Description:
Target: scaffold0394; HSP #1
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 199 - 363
Target Start/End: Original strand, 1697 - 1861
Alignment:
| Q |
199 |
ggagaatataagaaaggctttggaggataaggcactgactgaagtggtccttgtagcatttctattactctattcatagatggtctatctaatggatttg |
298 |
Q |
| |
|
|||||| |||||| ||||||||||||||| | | ||| |||||||| ||||| ||||||||||||||| || |||| ||||| |||||| ||||||| | |
|
|
| T |
1697 |
ggagaaaataagataggctttggaggatattgtattgaatgaagtggcccttgcagcatttctattactttactcattgatggactatctgatggattcg |
1796 |
T |
|
| Q |
299 |
tttgaatgcaccatagactaaccatagtaatctttcttaccgtatcattttcttcctttgagatt |
363 |
Q |
| |
|
||||||| ||||| | || |||||||||||||| ||| | ||||||||||||| | ||||||| |
|
|
| T |
1797 |
tttgaatacaccacaaacccaccatagtaatcttctttagcatatcattttcttcttctgagatt |
1861 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0254 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0254
Description:
Target: scaffold0254; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 199 - 281
Target Start/End: Original strand, 1751 - 1833
Alignment:
| Q |
199 |
ggagaatataagaaaggctttggaggataaggcactgactgaagtggtccttgtagcatttctattactctattcatagatgg |
281 |
Q |
| |
|
|||||| |||||| ||||||||||||||| | | ||| |||||||| ||||| ||||||||||||||| || |||| ||||| |
|
|
| T |
1751 |
ggagaaaataagataggctttggaggatattgtattgaatgaagtggcccttgcagcatttctattactttactcattgatgg |
1833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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