View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7966_low_1 (Length: 712)

Name: NF7966_low_1
Description: NF7966
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7966_low_1
NF7966_low_1
[»] chr7 (53 HSPs)
chr7 (18-401)||(33157720-33158104)
chr7 (546-700)||(3689175-3689329)
chr7 (549-599)||(47719709-47719759)
chr7 (415-464)||(33170458-33170507)
chr7 (545-599)||(38225980-38226034)
chr7 (548-599)||(25342493-25342544)
chr7 (548-599)||(30660589-30660640)
chr7 (548-599)||(31278159-31278210)
chr7 (548-599)||(37949601-37949652)
chr7 (549-599)||(1417605-1417655)
chr7 (549-599)||(13785598-13785648)
chr7 (549-599)||(23901099-23901149)
chr7 (553-599)||(25343304-25343350)
chr7 (545-599)||(26636096-26636150)
chr7 (549-599)||(30661460-30661510)
chr7 (553-599)||(37950472-37950518)
chr7 (553-599)||(45161970-45162016)
chr7 (554-599)||(7668484-7668529)
chr7 (554-599)||(18977774-18977819)
chr7 (554-599)||(25599024-25599069)
chr7 (554-599)||(46428189-46428234)
chr7 (552-600)||(3029202-3029250)
chr7 (554-598)||(45099899-45099943)
chr7 (548-599)||(14686127-14686178)
chr7 (552-599)||(24389621-24389668)
chr7 (556-599)||(43065121-43065164)
chr7 (553-599)||(3772531-3772577)
chr7 (549-599)||(14305087-14305137)
chr7 (553-599)||(27948447-27948493)
chr7 (554-599)||(19067639-19067684)
chr7 (549-598)||(19068401-19068450)
chr7 (553-598)||(24719336-24719381)
chr7 (554-599)||(26636865-26636910)
chr7 (553-598)||(37395505-37395550)
chr7 (554-598)||(3903345-3903389)
chr7 (554-598)||(37706430-37706474)
chr7 (547-599)||(40273555-40273607)
chr7 (586-689)||(9753963-9754066)
chr7 (464-531)||(26253069-26253136)
chr7 (548-599)||(48718196-48718247)
chr7 (549-599)||(3688381-3688431)
chr7 (553-599)||(16664130-16664176)
chr7 (553-599)||(17638490-17638536)
chr7 (549-599)||(24453731-24453781)
chr7 (545-578)||(3902541-3902574)
chr7 (554-599)||(15305245-15305290)
chr7 (554-599)||(21496988-21497033)
chr7 (554-599)||(25343244-25343289)
chr7 (554-599)||(46428822-46428867)
chr7 (565-599)||(3027987-3028021)
chr7 (554-599)||(25599824-25599869)
chr7 (565-598)||(31277436-31277469)
chr7 (554-599)||(45099140-45099185)
[»] chr8 (38 HSPs)
chr8 (549-700)||(17724763-17724914)
chr8 (557-639)||(9197101-9197183)
chr8 (553-599)||(11686228-11686274)
chr8 (545-599)||(31641505-31641559)
chr8 (553-599)||(38576306-38576352)
chr8 (554-599)||(41974643-41974688)
chr8 (548-603)||(17725654-17725709)
chr8 (556-599)||(28929850-28929893)
chr8 (549-599)||(27441464-27441514)
chr8 (549-599)||(32414528-32414578)
chr8 (554-599)||(3165126-3165171)
chr8 (553-602)||(14825645-14825694)
chr8 (554-599)||(31642091-31642136)
chr8 (554-599)||(39778921-39778966)
chr8 (554-599)||(39779845-39779890)
chr8 (554-598)||(8372916-8372960)
chr8 (554-598)||(8373698-8373742)
chr8 (554-602)||(9197821-9197869)
chr8 (545-608)||(22320368-22320431)
chr8 (556-599)||(26654382-26654425)
chr8 (548-599)||(31602013-31602064)
chr8 (554-597)||(37732829-37732872)
chr8 (553-598)||(3043970-3044015)
chr8 (554-599)||(26652296-26652341)
chr8 (464-529)||(33963498-33963563)
chr8 (464-529)||(33978655-33978720)
chr8 (461-517)||(9491954-9492010)
chr8 (554-599)||(39860113-39860160)
chr8 (548-599)||(11686968-11687019)
chr8 (562-639)||(14754012-14754090)
chr8 (545-599)||(32413752-32413806)
chr8 (545-599)||(32979828-32979882)
chr8 (553-599)||(37025008-37025053)
chr8 (553-602)||(3043244-3043293)
chr8 (554-599)||(8996978-8997023)
chr8 (554-599)||(27442145-27442190)
chr8 (562-599)||(37064827-37064864)
chr8 (562-599)||(38628261-38628298)
[»] chr2 (45 HSPs)
chr2 (545-599)||(29513151-29513205)
chr2 (548-599)||(11750254-11750305)
chr2 (550-602)||(40252021-40252073)
chr2 (555-602)||(18820436-18820483)
chr2 (553-599)||(1297127-1297173)
chr2 (553-599)||(9275588-9275634)
chr2 (549-599)||(29719444-29719494)
chr2 (550-599)||(22301874-22301923)
chr2 (549-598)||(27177910-27177959)
chr2 (554-602)||(18821232-18821280)
chr2 (553-600)||(12725618-12725665)
chr2 (556-639)||(20432332-20432415)
chr2 (548-599)||(27178649-27178700)
chr2 (557-599)||(6584231-6584273)
chr2 (549-599)||(9540329-9540379)
chr2 (545-599)||(22560572-22560626)
chr2 (549-599)||(36238734-36238784)
chr2 (554-599)||(1296382-1296427)
chr2 (554-599)||(8542552-8542597)
chr2 (554-599)||(9276334-9276379)
chr2 (554-599)||(15902886-15902931)
chr2 (562-599)||(16692978-16693015)
chr2 (549-598)||(26589022-26589071)
chr2 (554-599)||(42459054-42459099)
chr2 (553-601)||(23857026-23857074)
chr2 (554-602)||(34812857-34812905)
chr2 (554-598)||(36237634-36237678)
chr2 (548-599)||(18174096-18174147)
chr2 (548-599)||(26752727-26752778)
chr2 (548-599)||(42182619-42182670)
chr2 (553-599)||(11751073-11751119)
chr2 (553-599)||(18174674-18174720)
chr2 (553-599)||(29559424-29559470)
chr2 (562-599)||(11007242-11007279)
chr2 (550-599)||(15774201-15774250)
chr2 (554-599)||(24121294-24121339)
chr2 (546-599)||(24933831-24933884)
chr2 (565-600)||(8669199-8669234)
chr2 (552-595)||(15290086-15290128)
chr2 (549-599)||(38361065-38361115)
chr2 (545-590)||(20589030-20589075)
chr2 (554-599)||(22301197-22301242)
chr2 (562-599)||(23343790-23343827)
chr2 (554-599)||(24754998-24755043)
chr2 (557-598)||(26588244-26588285)
[»] chr5 (41 HSPs)
chr5 (549-599)||(1281833-1281883)
chr5 (553-599)||(235593-235639)
chr5 (545-599)||(6476795-6476849)
chr5 (549-599)||(7632092-7632142)
chr5 (546-599)||(1554087-1554140)
chr5 (553-599)||(236933-236979)
chr5 (546-595)||(1283533-1283582)
chr5 (554-599)||(19128772-19128817)
chr5 (554-599)||(29046031-29046076)
chr5 (554-598)||(234703-234747)
chr5 (554-598)||(237826-237870)
chr5 (554-598)||(19359706-19359750)
chr5 (552-599)||(2313947-2313994)
chr5 (545-599)||(9407243-9407297)
chr5 (549-595)||(10554519-10554565)
chr5 (549-599)||(27364491-27364541)
chr5 (545-599)||(34600835-34600889)
chr5 (562-599)||(1283504-1283541)
chr5 (562-599)||(10554557-10554594)
chr5 (554-599)||(28705883-28705928)
chr5 (554-599)||(29087927-29087972)
chr5 (549-598)||(38056791-38056840)
chr5 (554-598)||(14478923-14478967)
chr5 (554-598)||(19360481-19360525)
chr5 (555-599)||(25858213-25858257)
chr5 (553-601)||(38057597-38057645)
chr5 (548-599)||(17071798-17071849)
chr5 (553-599)||(17071225-17071271)
chr5 (549-599)||(20854909-20854959)
chr5 (557-599)||(28705170-28705212)
chr5 (553-599)||(34600262-34600308)
chr5 (548-598)||(43510228-43510278)
chr5 (554-599)||(4084882-4084927)
chr5 (565-598)||(27363779-27363812)
chr5 (562-599)||(34709041-34709078)
chr5 (555-599)||(36038698-36038742)
chr5 (556-599)||(22798905-22798948)
chr5 (482-517)||(35192194-35192229)
chr5 (553-599)||(22212983-22213029)
chr5 (557-599)||(22799764-22799806)
chr5 (549-599)||(33006299-33006349)
[»] chr1 (55 HSPs)
chr1 (549-599)||(24991967-24992017)
chr1 (554-602)||(19172577-19172625)
chr1 (545-599)||(24992749-24992803)
chr1 (550-599)||(4433852-4433901)
chr1 (545-598)||(37577651-37577704)
chr1 (554-599)||(47967864-47967909)
chr1 (553-599)||(11704813-11704859)
chr1 (548-598)||(17171927-17171977)
chr1 (549-599)||(17172667-17172717)
chr1 (549-599)||(34309235-34309285)
chr1 (553-599)||(49680812-49680858)
chr1 (550-599)||(4439211-4439260)
chr1 (554-599)||(25468512-25468557)
chr1 (554-599)||(25469091-25469136)
chr1 (545-598)||(34308466-34308519)
chr1 (553-601)||(10120784-10120832)
chr1 (548-599)||(7558445-7558496)
chr1 (548-599)||(10121557-10121608)
chr1 (548-599)||(13262829-13262880)
chr1 (549-599)||(7559204-7559254)
chr1 (553-603)||(36390368-36390418)
chr1 (545-599)||(46812192-46812246)
chr1 (553-598)||(13142673-13142718)
chr1 (554-599)||(13263521-13263566)
chr1 (549-598)||(27256718-27256767)
chr1 (554-599)||(30663360-30663405)
chr1 (554-599)||(30663981-30664026)
chr1 (554-599)||(30932800-30932845)
chr1 (549-598)||(46391872-46391921)
chr1 (555-602)||(19171781-19171828)
chr1 (556-603)||(45818025-45818072)
chr1 (553-599)||(168891-168937)
chr1 (553-599)||(12761501-12761547)
chr1 (554-599)||(7406247-7406292)
chr1 (562-599)||(8987800-8987837)
chr1 (554-599)||(11548802-11548847)
chr1 (553-598)||(27790713-27790758)
chr1 (554-599)||(28181535-28181580)
chr1 (562-599)||(28182077-28182114)
chr1 (562-599)||(30931898-30931935)
chr1 (549-602)||(37576921-37576974)
chr1 (565-670)||(47969280-47969385)
chr1 (563-599)||(8988553-8988589)
chr1 (554-602)||(25671172-25671220)
chr1 (554-598)||(37853141-37853185)
chr1 (548-599)||(32038473-32038524)
chr1 (571-614)||(47968650-47968693)
chr1 (553-599)||(169632-169678)
chr1 (549-599)||(4134025-4134075)
chr1 (549-599)||(43252481-43252530)
chr1 (562-599)||(23026593-23026630)
chr1 (554-595)||(26118675-26118716)
chr1 (554-599)||(36389777-36389822)
chr1 (554-599)||(46909367-46909412)
chr1 (554-599)||(50271788-50271833)
[»] chr6 (25 HSPs)
chr6 (548-599)||(8488465-8488516)
chr6 (554-599)||(10171278-10171323)
chr6 (554-599)||(26529517-26529562)
chr6 (548-599)||(10171970-10172021)
chr6 (545-599)||(19322975-19323030)
chr6 (545-599)||(9441230-9441284)
chr6 (553-599)||(12344895-12344941)
chr6 (562-608)||(19311822-19311868)
chr6 (549-599)||(19323771-19323821)
chr6 (553-599)||(26528824-26528870)
chr6 (554-599)||(33436278-33436323)
chr6 (548-598)||(1366964-1367014)
chr6 (553-599)||(33435341-33435387)
chr6 (554-599)||(8489284-8489329)
chr6 (554-599)||(18227734-18227778)
chr6 (554-599)||(19311003-19311048)
chr6 (548-599)||(3623171-3623222)
chr6 (553-599)||(3623751-3623797)
chr6 (553-599)||(21133231-21133277)
chr6 (553-599)||(25060817-25060863)
chr6 (549-598)||(2512435-2512484)
chr6 (562-599)||(5861896-5861933)
chr6 (557-598)||(9441985-9442026)
chr6 (557-598)||(9442066-9442107)
chr6 (463-515)||(24608319-24608372)
[»] chr4 (62 HSPs)
chr4 (548-599)||(55000684-55000735)
chr4 (549-599)||(24551928-24551978)
chr4 (545-598)||(2444366-2444419)
chr4 (554-599)||(20774185-20774230)
chr4 (545-602)||(24551689-24551746)
chr4 (554-599)||(30573714-30573759)
chr4 (548-599)||(47688484-47688535)
chr4 (552-599)||(55976960-55977007)
chr4 (545-599)||(3654520-3654574)
chr4 (545-599)||(26159626-26159680)
chr4 (554-600)||(53147874-53147920)
chr4 (548-598)||(53772804-53772854)
chr4 (554-599)||(24158825-24158870)
chr4 (554-598)||(19550289-19550333)
chr4 (554-602)||(31329719-31329767)
chr4 (552-599)||(599306-599353)
chr4 (548-599)||(42882686-42882737)
chr4 (556-599)||(52871303-52871346)
chr4 (553-599)||(26147037-26147083)
chr4 (545-599)||(47785804-47785858)
chr4 (549-599)||(53732433-53732483)
chr4 (553-599)||(53773591-53773637)
chr4 (557-599)||(55976172-55976214)
chr4 (554-599)||(7842534-7842579)
chr4 (554-599)||(8248525-8248570)
chr4 (554-599)||(8266190-8266235)
chr4 (562-599)||(16903648-16903685)
chr4 (549-598)||(19080383-19080432)
chr4 (554-599)||(44792641-44792686)
chr4 (554-599)||(53148616-53148661)
chr4 (561-598)||(53733737-53733774)
chr4 (552-599)||(5046487-5046534)
chr4 (557-639)||(12919591-12919674)
chr4 (556-599)||(55001445-55001488)
chr4 (548-599)||(56262475-56262526)
chr4 (549-599)||(142529-142579)
chr4 (553-599)||(2446166-2446212)
chr4 (549-599)||(40347552-40347602)
chr4 (553-599)||(47687911-47687957)
chr4 (554-599)||(7841547-7841592)
chr4 (554-599)||(8247699-8247744)
chr4 (562-599)||(9365821-9365858)
chr4 (562-595)||(16903677-16903710)
chr4 (554-599)||(24374792-24374837)
chr4 (562-599)||(43146653-43146690)
chr4 (554-599)||(44791727-44791772)
chr4 (555-599)||(8265365-8265409)
chr4 (567-599)||(32088835-32088867)
chr4 (563-599)||(44469504-44469540)
chr4 (464-515)||(3850595-3850646)
chr4 (554-597)||(40495098-40495141)
chr4 (548-599)||(42880905-42880956)
chr4 (555-598)||(50184432-50184475)
chr4 (553-599)||(1866345-1866391)
chr4 (569-599)||(5046002-5046032)
chr4 (565-599)||(11938725-11938759)
chr4 (553-599)||(11939446-11939492)
chr4 (549-599)||(12920279-12920329)
chr4 (549-599)||(56263077-56263127)
chr4 (554-599)||(1465323-1465368)
chr4 (554-599)||(9365172-9365217)
chr4 (553-602)||(46168140-46168189)
[»] scaffold0093 (1 HSPs)
scaffold0093 (545-599)||(23733-23787)
[»] chr3 (44 HSPs)
chr3 (549-599)||(17603966-17604016)
chr3 (557-639)||(20212986-20213068)
chr3 (552-599)||(17603169-17603216)
chr3 (556-639)||(40872773-40872856)
chr3 (549-599)||(21727534-21727584)
chr3 (549-599)||(46149627-46149677)
chr3 (549-602)||(11652291-11652344)
chr3 (550-599)||(31974650-31974699)
chr3 (554-599)||(37988223-37988268)
chr3 (554-599)||(48648206-48648251)
chr3 (554-599)||(48649178-48649223)
chr3 (554-599)||(48765075-48765120)
chr3 (554-602)||(27082779-27082827)
chr3 (556-599)||(265103-265146)
chr3 (552-599)||(11654034-11654081)
chr3 (553-599)||(264468-264514)
chr3 (545-599)||(48507037-48507091)
chr3 (554-599)||(14871156-14871201)
chr3 (554-599)||(46150734-46150779)
chr3 (562-599)||(48413330-48413367)
chr3 (554-599)||(48764480-48764525)
chr3 (554-602)||(13477060-13477108)
chr3 (562-598)||(17605717-17605753)
chr3 (554-602)||(20213533-20213581)
chr3 (553-601)||(54458668-54458716)
chr3 (562-598)||(55373712-55373748)
chr3 (556-599)||(6974748-6974791)
chr3 (563-598)||(44699826-44699861)
chr3 (557-599)||(981673-981715)
chr3 (556-598)||(37987238-37987280)
chr3 (553-599)||(51469284-51469330)
chr3 (562-599)||(13477783-13477820)
chr3 (554-599)||(37520566-37520611)
chr3 (562-599)||(41458044-41458081)
chr3 (554-599)||(45081408-45081453)
chr3 (557-598)||(52282418-52282459)
chr3 (463-515)||(25373639-25373691)
chr3 (555-599)||(31115604-31115648)
chr3 (556-599)||(51827499-51827542)
chr3 (556-602)||(10847911-10847957)
chr3 (557-599)||(33277509-33277551)
chr3 (562-599)||(29856063-29856100)
chr3 (562-599)||(51826548-51826585)
chr3 (554-599)||(52266458-52266503)
[»] scaffold0085 (4 HSPs)
scaffold0085 (548-598)||(22076-22126)
scaffold0085 (562-599)||(15863-15900)
scaffold0085 (554-599)||(15025-15070)
scaffold0085 (554-599)||(15084-15129)
[»] scaffold2007 (1 HSPs)
scaffold2007 (554-599)||(753-798)
[»] scaffold0176 (1 HSPs)
scaffold0176 (554-599)||(26594-26639)
[»] scaffold0164 (1 HSPs)
scaffold0164 (554-685)||(11673-11804)
[»] scaffold0086 (1 HSPs)
scaffold0086 (553-599)||(8296-8342)
[»] scaffold0096 (1 HSPs)
scaffold0096 (557-598)||(39901-39942)
[»] scaffold0504 (1 HSPs)
scaffold0504 (554-598)||(5385-5429)
[»] scaffold1207 (1 HSPs)
scaffold1207 (562-600)||(1597-1635)
[»] scaffold1213 (1 HSPs)
scaffold1213 (556-599)||(1900-1943)
[»] scaffold0418 (1 HSPs)
scaffold0418 (554-597)||(6891-6934)
[»] scaffold0012 (1 HSPs)
scaffold0012 (562-593)||(181020-181051)
[»] scaffold0002 (1 HSPs)
scaffold0002 (554-599)||(428906-428951)


Alignment Details
Target: chr7 (Bit Score: 304; Significance: 1e-171; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 18 - 401
Target Start/End: Complemental strand, 33158104 - 33157720
Alignment:
Q  18 caaactgctattgttcgaaaaacaaagataatcatttgaggaccaatttgatgttgatgatctttggcataccaatctggggagtttatatgaaatctca 117  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  33158104 caaactgctattgttcaaaaaacaaagataatcatttgaggaccaatttgatgttgatgatcttttgcataccaatctgggtagtttatatgaaatctca 33158005  T
Q  118 agcaaagttgtattcgcacaaaacaattttggcttctagcaaattgcatgatcagacaaagacgagaatccccttggaccatcaacaattacatcacatt 217  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33158004 agcaaagttgtattcgcacaaaacacttatggcttctagcaaattgcatgatcagacgaagacgagaatccccttggaccatcaacaattacatcacatt 33157905  T
Q  218 gctttctcctcttttgtttttcgattcaagatttttacagaacccaactaattaga-nnnnnnnnagtctttacttctatcgatttaatcctttccagtg 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||         |||||||||||||||||||||||||||||||||||    
T  33157904 gctttctcctcttttgtttttcgattcaagatttttacagaacccaactaattagatttttttttagtctttacttctatcgatttaatcctttccagtg 33157805  T
Q  317 nnnnnnntcttgttaaaaagcaattcacatatcactgtaatatattttaggaaaaaaggcactaccctcagttatgcttaaatga 401  Q
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  33157804 gaaaaaatcttgttaaaaagcaattcacatatcactgtaatatattttaggaaaaaaggcactaccctcagttatgcgtaaatga 33157720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 8e-63
Query Start/End: Original strand, 546 - 700
Target Start/End: Complemental strand, 3689329 - 3689175
Alignment:
Q  546 agagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatcctattcgtccttttttacatcttaatggttcatatttatttgcttt 645  Q
    ||||||| ||||||| |||||||| | ||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  3689329 agagagacaggatccgttgacacctgatgtcaacagattcgttgacaccaaatcctgttcgtccttttttacatcttaatggttcatatttatttgcttt 3689230  T
Q  646 aattgttcacgtgcacactctttaggagataaatgaaatcacgctctctgcttct 700  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  3689229 aattgttcacgtgcacactctttaggagataaatgaaatcatgctctcttcttct 3689175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 47719759 - 47719709
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47719759 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 47719709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 415 - 464
Target Start/End: Complemental strand, 33170507 - 33170458
Alignment:
Q  415 gtcatttgcaaaccatctgcaaaaatagcatgtgactataaagtataaac 464  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33170507 gtcatttgcaaaccatctgcaaaaatagcatgtgactataaagtataaac 33170458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 38226034 - 38225980
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  38226034 gagagagataggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 38225980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 25342493 - 25342544
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25342493 agagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 25342544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 30660589 - 30660640
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  30660589 agagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 30660640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 31278210 - 31278159
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  31278210 agagataggatccgttgacaccagatgtcaacggattcgttgacaccaaatc 31278159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 37949601 - 37949652
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  37949601 agagacaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 37949652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 1417605 - 1417655
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  1417605 gagataggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 1417655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 13785648 - 13785598
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  13785648 gagacaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 13785598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 23901149 - 23901099
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||||||| |||||||||||| |||||    
T  23901149 gagataggatccattgacaccaggtgtcaacgaattcgttgacactaaatc 23901099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 25343304 - 25343350
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  25343304 taggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 25343350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 545 - 599
Target Start/End: Original strand, 26636096 - 26636150
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||  ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26636096 gagagagtcaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 26636150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 30661510 - 30661460
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  30661510 gagacaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 30661460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 37950518 - 37950472
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  37950518 taggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 37950472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 45161970 - 45162016
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  45161970 taggatccattgacaccaggtgttaacggattcgttgacaccaaatc 45162016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 7668484 - 7668529
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  7668484 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 7668529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 18977819 - 18977774
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  18977819 aggatccattgacaccaggtgtcaacggattcgttaacaccaaatc 18977774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 25599024 - 25599069
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  25599024 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 25599069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 46428189 - 46428234
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  46428189 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 46428234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 552 - 600
Target Start/End: Complemental strand, 3029250 - 3029202
Alignment:
Q  552 ataggatccattgacaccaggtgtcaacggattcgttgacaccaaatcc 600  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  3029250 ataggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatcc 3029202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 554 - 598
Target Start/End: Complemental strand, 45099943 - 45099899
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  45099943 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 45099899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 14686127 - 14686178
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  14686127 agagataggatccgttgacaccaagtgtcaacggatttgttgacaccaaatc 14686178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 552 - 599
Target Start/End: Complemental strand, 24389668 - 24389621
Alignment:
Q  552 ataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||    
T  24389668 ataggatccgttgacaccaggtgtcaacggattcattgacaccaaatc 24389621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 599
Target Start/End: Complemental strand, 43065164 - 43065121
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  43065164 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 43065121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 3772577 - 3772531
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  3772577 taggatccgttgacaccaggtgtcaacgtattcgttgacaccaaatc 3772531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 14305087 - 14305137
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||| ||||||| |||||||||||||||| |||||||||||||    
T  14305087 gagataggatccgttgacactaggtgtcaacggattcattgacaccaaatc 14305137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 27948447 - 27948493
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  27948447 taggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 27948493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 19067639 - 19067684
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||| ||||||||||||||||||||||||||||    
T  19067639 aggatccgttgacaccacgtgtcaacggattcgttgacaccaaatc 19067684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 598
Target Start/End: Complemental strand, 19068450 - 19068401
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  19068450 gagacaggatccgttgacaccaggtgtcaacgtattcgttgacaccaaat 19068401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 598
Target Start/End: Original strand, 24719336 - 24719381
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||    
T  24719336 taggatccgttgacaccagatgtcaacggattcgttgacaccaaat 24719381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 26636910 - 26636865
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  26636910 aggatccgttgacacaaggtgtcaacggattcgttgacaccaaatc 26636865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 37395550 - 37395505
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||| ||||||||||||||||||||||||||| |||||||||    
T  37395550 taggatccgttgacaccaggtgtcaacggattcgttaacaccaaat 37395505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 598
Target Start/End: Complemental strand, 3903389 - 3903345
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||    
T  3903389 aggatccgttgacaccaggtgtcaacggatccgttgacaccaaat 3903345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 598
Target Start/End: Original strand, 37706430 - 37706474
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||||||||||||||| |||||||||||||| |||||||||    
T  37706430 aggatccattgacaccaggtatcaacggattcgttaacaccaaat 37706474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 547 - 599
Target Start/End: Original strand, 40273555 - 40273607
Alignment:
Q  547 gagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| |||||||| ||||||||||||||||| | ||||||||||||||||||    
T  40273555 gagagttaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatc 40273607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 586 - 689
Target Start/End: Complemental strand, 9754066 - 9753963
Alignment:
Q  586 gttgacaccaaatcctattcgtccttttttacatcttaatggttcatatttatttgctttaattgttcacgtgcacactctttaggagataaatgaaatc 685  Q
    |||||||||||||| ||| ||||||||||| |||||||| || | | |||||||  ||||||||||||| ||| | |||| ||   ||||||| ||||||    
T  9754066 gttgacaccaaatcatatccgtcctttttttcatcttaacggctgacatttattcactttaattgttcaggtgaagactcctttacagataaaagaaatc 9753967  T
Q  686 acgc 689  Q
    ||||    
T  9753966 acgc 9753963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 464 - 531
Target Start/End: Original strand, 26253069 - 26253136
Alignment:
Q  464 cagggccggccatgagacggtgcaaagagctctactgagctggacctccaaattatggagacccaaat 531  Q
    ||||||||||  ||||  |||||||| |||||| ||||||||| |||||||||||||||| |||||||    
T  26253069 cagggccggctttgagggggtgcaaacagctcttctgagctgggcctccaaattatggaggcccaaat 26253136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 48718247 - 48718196
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||||||||||| |||||||||| |||| |||||||||||||||    
T  48718247 agagttaggatccattgacagcaggtgtcaatggatccgttgacaccaaatc 48718196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 3688381 - 3688431
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||| |||||||||| | |||||||||||||||||||||||||    
T  3688381 gagacaggatccgttgacaccagatatcaacggattcgttgacaccaaatc 3688431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 16664176 - 16664130
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||    
T  16664176 taggatccgttgacaccaggtgtcaacggatccgttgacactaaatc 16664130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 17638536 - 17638490
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||||||||||||||||||| ||||||||| |||||    
T  17638536 taggatccgttgacaccaggtgtcaacggatccgttgacactaaatc 17638490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 24453781 - 24453731
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| |||| | ||||||||||||||||||||||| ||||||||||||||    
T  24453781 gagatgggattcgttgacaccaggtgtcaacggatttgttgacaccaaatc 24453731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 545 - 578
Target Start/End: Original strand, 3902541 - 3902574
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaa 578  Q
    ||||||||||||||||||||||||||||||||||    
T  3902541 gagagagataggatccattgacaccaggtgtcaa 3902574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 15305290 - 15305245
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||| |||||||||| | ||||||||||||||||||    
T  15305290 aggatccattgacatcaggtgtcaatgaattcgttgacaccaaatc 15305245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 21497033 - 21496988
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||||    
T  21497033 aggatccgttgacaacaggtgtcaacgaattcgttgacaccaaatc 21496988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 25343289 - 25343244
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  25343289 aggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatc 25343244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 46428867 - 46428822
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  46428867 aggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatc 46428822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 599
Target Start/End: Original strand, 3027987 - 3028021
Alignment:
Q  565 acaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||| ||||||||||||||||||    
T  3027987 acaccaggtgtcaacgaattcgttgacaccaaatc 3028021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 25599869 - 25599824
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||||||||  ||||| |||||||||||||    
T  25599869 aggatccgttgacaccaggtgtcaatagattcattgacaccaaatc 25599824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 565 - 598
Target Start/End: Original strand, 31277436 - 31277469
Alignment:
Q  565 acaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||||||||||| |||||||||||||||||    
T  31277436 acaccaggtgtcaacgaattcgttgacaccaaat 31277469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 45099140 - 45099185
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||| |||||||||||| ||||||| ||||||||||    
T  45099140 aggatccgttgacatcaggtgtcaacgaattcgttaacaccaaatc 45099185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 120; Significance: 5e-61; HSPs: 38)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 549 - 700
Target Start/End: Original strand, 17724763 - 17724914
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatcctattcgtccttttttacatcttaatggttcatatttatttgctttaat 648  Q
    |||| ||||||  |||||||| ||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  17724763 gagacaggatcagttgacacctggtgtcaacagattcgttgacaccaaatcctgttcgtccttttttacatcttaatggttcatatttatttgctttaat 17724862  T
Q  649 tgttcacgtgcacactctttaggagataaatgaaatcacgctctctgcttct 700  Q
    |||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  17724863 tgttcacgtgcacactctttaggagataaatgaaatcatgctctcttcttct 17724914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 639
Target Start/End: Original strand, 9197101 - 9197183
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaatcctattcgtccttttttacatcttaatggttcatatttatt 639  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| ||||| || |||| | |||||||    
T  9197101 atccgttgacaccaggtgtcaacgaattcgttgacaccaaatcctatccgttcttttttccatctcaacggttgacatttatt 9197183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 11686228 - 11686274
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||    
T  11686228 taggatccattggcaccaggtgtcaacggattcgttgacaccaaatc 11686274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 545 - 599
Target Start/End: Original strand, 31641505 - 31641559
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||  ||||||||||||||||||||||||| ||||||||||||||||||||    
T  31641505 gagagagtcaggatccattgacaccaggtgtcaatggattcgttgacaccaaatc 31641559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 38576352 - 38576306
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  38576352 taggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 38576306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 41974643 - 41974688
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  41974643 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 41974688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 603
Target Start/End: Complemental strand, 17725709 - 17725654
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatcctat 603  Q
    ||||| ||||||| |||||| |||||||||||| ||||||||||||||||||||||    
T  17725709 agagacaggatccgttgacagcaggtgtcaacgaattcgttgacaccaaatcctat 17725654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 599
Target Start/End: Original strand, 28929850 - 28929893
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  28929850 gatccattgacaccagatgtcaacggattcgttgacaccaaatc 28929893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 27441464 - 27441514
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||| ||||||||||||||||||| ||||||||||| ||||||    
T  27441464 gagataggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatc 27441514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 32414578 - 32414528
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||  ||||||||||||||||||||||||||||||||||||||    
T  32414578 gagaaaggatctgttgacaccaggtgtcaacggattcgttgacaccaaatc 32414528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 3165171 - 3165126
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||| |||||||||||||||||||||||||||||||    
T  3165171 aggatccgttgacatcaggtgtcaacggattcgttgacaccaaatc 3165126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 602
Target Start/End: Original strand, 14825645 - 14825694
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    |||||||| ||||||| ||||||||||||||||||||||| |||||||||    
T  14825645 taggatccgttgacactaggtgtcaacggattcgttgacatcaaatccta 14825694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 31642136 - 31642091
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||| |||||||| ||||||||||||||||||    
T  31642136 aggatccattgacaccagatgtcaacgaattcgttgacaccaaatc 31642091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 39778921 - 39778966
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  39778921 aggatccattgacaccaggtgtcaacgaattcgttaacaccaaatc 39778966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 39779890 - 39779845
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  39779890 aggatccattgacaccaggtgtcaacgaattcgttaacaccaaatc 39779845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 598
Target Start/End: Original strand, 8372916 - 8372960
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| |||||||| ||||||||||||||||||||||||||||    
T  8372916 aggatccgttgacacctggtgtcaacggattcgttgacaccaaat 8372960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 598
Target Start/End: Complemental strand, 8373742 - 8373698
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| ||||||||| |||||||||||||||||||||||||||    
T  8373742 aggatccgttgacaccaagtgtcaacggattcgttgacaccaaat 8373698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 602
Target Start/End: Complemental strand, 9197869 - 9197821
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    ||||||| ||||||||| ||||||||| |||||||||||||||||||||    
T  9197869 aggatccgttgacaccaagtgtcaacgaattcgttgacaccaaatccta 9197821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 545 - 608
Target Start/End: Original strand, 22320368 - 22320431
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatcctattcgtc 608  Q
    |||||||  ||||||| ||||  |||||||||||||||||||||||||||||||| || |||||    
T  22320368 gagagagtcaggatccgttgatgccaggtgtcaacggattcgttgacaccaaatcttaatcgtc 22320431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 556 - 599
Target Start/End: Complemental strand, 26654425 - 26654382
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| ||||||||||||||||| ||||||||||||||||||||    
T  26654425 gatccgttgacaccaggtgtcaatggattcgttgacaccaaatc 26654382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 31602013 - 31602064
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||  ||||||||||||||||||| ||||||||||||||||||    
T  31602013 agagttaggatcggttgacaccaggtgtcaacgaattcgttgacaccaaatc 31602064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 554 - 597
Target Start/End: Original strand, 37732829 - 37732872
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaa 597  Q
    ||||||| |||||||| |||||||||||||||||||||||||||    
T  37732829 aggatccgttgacacctggtgtcaacggattcgttgacaccaaa 37732872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 3044015 - 3043970
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||| | ||||||||||||||||| |||||||||||||||||    
T  3044015 taggatccgtcgacaccaggtgtcaacgaattcgttgacaccaaat 3043970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 26652296 - 26652341
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  26652296 aggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 26652341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 529
Target Start/End: Complemental strand, 33963563 - 33963498
Alignment:
Q  464 cagggccggccatgagacggtgcaaagagctctactgagctggacctccaaattatggagacccaa 529  Q
    ||||||||||| ||||  |||||||| |||||||||| |||| ||||||||||| ||||| |||||    
T  33963563 cagggccggccttgagggggtgcaaacagctctactgcgctgaacctccaaattttggaggcccaa 33963498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 464 - 529
Target Start/End: Complemental strand, 33978720 - 33978655
Alignment:
Q  464 cagggccggccatgagacggtgcaaagagctctactgagctggacctccaaattatggagacccaa 529  Q
    ||||||||||| ||||  |||||||| |||||||||||||||  |||||||||| ||||| |||||    
T  33978720 cagggccggccttgagggggtgcaaacagctctactgagctgagcctccaaattttggaggcccaa 33978655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 461 - 517
Target Start/End: Complemental strand, 9492010 - 9491954
Alignment:
Q  461 aaacagggccggccatgagacggtgcaaagagctctactgagctggacctccaaatt 517  Q
    ||||||||||| || ||||  |||||||| |||||||||||||||||||| ||||||    
T  9492010 aaacagggccgtccttgagggggtgcaaacagctctactgagctggaccttcaaatt 9491954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 39860113 - 39860160
Alignment:
Q  554 aggatccattgacaccaggtgtcaac--ggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||||||    
T  39860113 aggatccgttgacaccaggtgtcaacaaggattcgttgacaccaaatc 39860160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 11687019 - 11686968
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||| |||||||| |||||||||| |||||||||||| |||||    
T  11687019 agagttaggatccgttgacacctggtgtcaacgaattcgttgacactaaatc 11686968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 562 - 639
Target Start/End: Complemental strand, 14754090 - 14754012
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatcctattcgtccttt-tttacatcttaatggttcatatttatt 639  Q
    ||||||| ||||||||||||||| |||||||| ||||||||  ||| |||| |||  |||||||||| ||| |||||||    
T  14754090 ttgacactaggtgtcaacggatttgttgacactaaatcctagccgttctttgttttaatcttaatggctcacatttatt 14754012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 545 - 599
Target Start/End: Original strand, 32413752 - 32413806
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||| |||||||||||||||||||| |   |||||||||||||    
T  32413752 gagagagagaggatccgttgacaccaggtgtcaacggttatattgacaccaaatc 32413806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 32979882 - 32979828
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||  ||||||| ||||||||||||||||||| ||| ||| ||||||||||    
T  32979882 gagagagtcaggatccgttgacaccaggtgtcaacgaatttgttaacaccaaatc 32979828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 37025008 - 37025053
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||||||| ||||||| |||||||||||||||||||    
T  37025008 taggatccgttgacaccag-tgtcaacagattcgttgacaccaaatc 37025053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 602
Target Start/End: Original strand, 3043244 - 3043293
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    |||||||| |||||||| |||||||||  |||| ||||||||||||||||    
T  3043244 taggatccgttgacacctggtgtcaacaaattcattgacaccaaatccta 3043293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 8997023 - 8996978
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||| ||||||||||||| |||| ||||||||||||||    
T  8997023 aggatccgttgataccaggtgtcaactgatttgttgacaccaaatc 8996978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 27442190 - 27442145
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||| || |||| ||||||||||    
T  27442190 aggatccgttgacaccaggtgtcaacgaatccgttaacaccaaatc 27442145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 37064827 - 37064864
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  37064827 ttgacaccaggtgtcaacgaattcattgacaccaaatc 37064864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 38628261 - 38628298
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||| ||||||||||||||||||| |||||    
T  38628261 ttgacaccaggtatcaacggattcgttgacacaaaatc 38628298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 3e-22; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 29513205 - 29513151
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29513205 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 29513151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 11750254 - 11750305
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  11750254 agagttaggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 11750305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 550 - 602
Target Start/End: Original strand, 40252021 - 40252073
Alignment:
Q  550 agataggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    ||||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  40252021 agatatgatccattaacaccaggtgtcaacggattcgttgacaccaaatccta 40252073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 555 - 602
Target Start/End: Original strand, 18820436 - 18820483
Alignment:
Q  555 ggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  18820436 ggatccattgacatcaggtgtcaacggattcgttgacaccaaatccta 18820483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 1297173 - 1297127
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  1297173 taggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 1297127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 9275588 - 9275634
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  9275588 taggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 9275634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 29719444 - 29719494
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  29719444 gagacaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 29719494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 550 - 599
Target Start/End: Complemental strand, 22301923 - 22301874
Alignment:
Q  550 agataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  22301923 agataggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 22301874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 598
Target Start/End: Original strand, 27177910 - 27177959
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  27177910 gagataggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 27177959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 554 - 602
Target Start/End: Complemental strand, 18821280 - 18821232
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||    
T  18821280 aggatccattgacaccaggtgtcaacggattaattgacaccaaatccta 18821232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 553 - 600
Target Start/End: Complemental strand, 12725665 - 12725618
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatcc 600  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||    
T  12725665 taggatccgttgacaccaggtgtcaacggatttgttgacaccaaatcc 12725618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 639
Target Start/End: Complemental strand, 20432415 - 20432332
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatcctattcgtccttttttacatcttaatggttcatatttatt 639  Q
    ||||| |||||||||||| ||||||||||| |||||||||||| |||| ||| ||||||| ||||| || |||| | |||||||    
T  20432415 gatccgttgacaccaggtatcaacggattcattgacaccaaattctatccgttcttttttccatctcaacggttgacatttatt 20432332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 27178700 - 27178649
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||| |||||||||||||||||||||||  |||||||||||||    
T  27178700 agagataggatccgttgacaccaggtgtcaacggattgtttgacaccaaatc 27178649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 599
Target Start/End: Complemental strand, 6584273 - 6584231
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  6584273 atccattgacaccaagtgtcaacggattcgttgacaccaaatc 6584231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 9540329 - 9540379
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  9540329 gagacaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 9540379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 22560626 - 22560572
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||  ||||||| |||||| |||||||||||||||||||||||||||||||    
T  22560626 gagagagtcaggatccgttgacatcaggtgtcaacggattcgttgacaccaaatc 22560572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 36238784 - 36238734
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| ||||||||||||||||||| ||||||||||| |||||||||||||    
T  36238784 gagatgggatccattgacaccaggtatcaacggattcattgacaccaaatc 36238734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 1296382 - 1296427
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  1296382 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 1296427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 8542597 - 8542552
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||    
T  8542597 aggatccatggacactaggtgtcaacggattcgttgacaccaaatc 8542552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 9276379 - 9276334
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  9276379 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 9276334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 15902931 - 15902886
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||    
T  15902931 aggatccgttgacaccaggtgtcaacggattcgttgacacaaaatc 15902886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 599
Target Start/End: Complemental strand, 16693015 - 16692978
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16693015 ttgacaccaggtgtcaacggattcgttgacaccaaatc 16692978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 598
Target Start/End: Complemental strand, 26589071 - 26589022
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  26589071 gagataggatccgttgacaccaagtgtcaacggattcgttgactccaaat 26589022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 42459054 - 42459099
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||    
T  42459054 aggatccattgacaccaggtgtcaacagattcgttgacatcaaatc 42459099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 601
Target Start/End: Complemental strand, 23857074 - 23857026
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatcct 601  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  23857074 taggatccgttgacacctggtgtcaacggattggttgacaccaaatcct 23857026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 602
Target Start/End: Complemental strand, 34812905 - 34812857
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    ||||||| |||||||||| |||||||||||||||| |||||||||||||    
T  34812905 aggatccgttgacaccagttgtcaacggattcgttaacaccaaatccta 34812857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 598
Target Start/End: Original strand, 36237634 - 36237678
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||    
T  36237634 aggatccgttgacaccaggtgtcaacggattcattgacaccaaat 36237678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 18174096 - 18174147
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||||||||||    
T  18174096 agagttaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatc 18174147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 26752778 - 26752727
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||| |||||| ||||||||||||||||||| ||||||||||| ||||||    
T  26752778 agagatgggatccgttgacaccaggtgtcaacgaattcgttgacatcaaatc 26752727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 42182670 - 42182619
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||| || ||||||||||||||||| ||||||||||||||||||||    
T  42182670 agagttaggacccgttgacaccaggtgtcaagggattcgttgacaccaaatc 42182619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 11751119 - 11751073
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  11751119 taggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 11751073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 18174720 - 18174674
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||    
T  18174720 taggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatc 18174674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 29559470 - 29559424
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||  ||||||||||||||||||| ||||||||||||||||||    
T  29559470 taggatctgttgacaccaggtgtcaacgaattcgttgacaccaaatc 29559424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 11007242 - 11007279
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||||||| |||||    
T  11007242 ttgacaccaggtgtcaacggattcgttgacactaaatc 11007279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 550 - 599
Target Start/End: Original strand, 15774201 - 15774250
Alignment:
Q  550 agataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||| |||||||| |||||||||| ||| ||||||||||||||    
T  15774201 agataggatccgttgacacctggtgtcaacgaatttgttgacaccaaatc 15774250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 24121339 - 24121294
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||| ||||| |||| ||||||||    
T  24121339 aggatccattgacaccaggtgtcaacagattcattgagaccaaatc 24121294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 546 - 599
Target Start/End: Original strand, 24933831 - 24933884
Alignment:
Q  546 agagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||| |||||||| |||||||||| |||| |||||||||||||    
T  24933831 agagagacaggatccgttgacacctggtgtcaacgaattcattgacaccaaatc 24933884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 565 - 600
Target Start/End: Complemental strand, 8669234 - 8669199
Alignment:
Q  565 acaccaggtgtcaacggattcgttgacaccaaatcc 600  Q
    ||||||||||||||| ||||||||||||||||||||    
T  8669234 acaccaggtgtcaacagattcgttgacaccaaatcc 8669199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 552 - 595
Target Start/End: Complemental strand, 15290128 - 15290086
Alignment:
Q  552 ataggatccattgacaccaggtgtcaacggattcgttgacacca 595  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||    
T  15290128 ataggatccgttgacaccaggtg-caacggattcgttgacacca 15290086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 38361065 - 38361115
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||| | |||||| |||||||||||| ||||||||||||||||||    
T  38361065 gagacaggatacgttgacatcaggtgtcaacgaattcgttgacaccaaatc 38361115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 545 - 590
Target Start/End: Complemental strand, 20589075 - 20589030
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttga 590  Q
    |||||||||||||||  |||||| |||||||||||||||| |||||    
T  20589075 gagagagataggatctgttgacatcaggtgtcaacggatttgttga 20589030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 22301197 - 22301242
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||| || |||| ||||||||||    
T  22301197 aggatccgttgacaccaggtgtcaacgaatccgttaacaccaaatc 22301242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 23343790 - 23343827
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||| |||||||||||||||||||| ||||||    
T  23343790 ttgacaccagatgtcaacggattcgttgacatcaaatc 23343827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 24755043 - 24754998
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||||||||  |||||||||| ||||||||    
T  24755043 aggatccgttgacaccaggtgtcaattgattcgttgaaaccaaatc 24754998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 598
Target Start/End: Original strand, 26588244 - 26588285
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| |||||| ||||||| ||||||||||||||||||||||    
T  26588244 atccgttgacatcaggtgttaacggattcgttgacaccaaat 26588285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 7e-20; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 1281833 - 1281883
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1281833 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 1281883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 235593 - 235639
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  235593 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 235639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 6476849 - 6476795
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  6476849 gagagagacaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 6476795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 7632092 - 7632142
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7632092 gagataggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 7632142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 546 - 599
Target Start/End: Complemental strand, 1554140 - 1554087
Alignment:
Q  546 agagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  1554140 agagagataggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 1554087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 236979 - 236933
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  236979 taggatccattgacaccaggtgtcaacggattcgtagacaccaaatc 236933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 546 - 595
Target Start/End: Complemental strand, 1283582 - 1283533
Alignment:
Q  546 agagagataggatccattgacaccaggtgtcaacggattcgttgacacca 595  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||||||    
T  1283582 agagagagaggatccgttgacaccaggtgtcaacggattcgttgacacca 1283533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 19128772 - 19128817
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  19128772 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 19128817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 29046031 - 29046076
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  29046031 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 29046076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 554 - 598
Target Start/End: Original strand, 234703 - 234747
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  234703 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 234747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 554 - 598
Target Start/End: Complemental strand, 237870 - 237826
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  237870 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 237826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 554 - 598
Target Start/End: Original strand, 19359706 - 19359750
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  19359706 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 19359750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 552 - 599
Target Start/End: Original strand, 2313947 - 2313994
Alignment:
Q  552 ataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  2313947 ataggatccattgacaccaggtgtcaacagattcattgacaccaaatc 2313994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 599
Target Start/End: Original strand, 9407243 - 9407297
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||  |||||| |||||||| ||||||||||||||||||||||||||||    
T  9407243 gagagagatgagatccaatgacaccaagtgtcaacggattcgttgacaccaaatc 9407297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 595
Target Start/End: Original strand, 10554519 - 10554565
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacacca 595  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||    
T  10554519 gagacaggatccgttgacaccaggtgtcaacggattcgttgacacca 10554565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 27364541 - 27364491
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  27364541 gagacaggatccgttgacaccaggtgtcaatggattcgttgacaccaaatc 27364491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 34600889 - 34600835
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||| |||||||||||||| |||| ||||||||||||||||||    
T  34600889 gagagagttaggatcccttgacaccaggtgttaacgaattcgttgacaccaaatc 34600835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 599
Target Start/End: Complemental strand, 1283541 - 1283504
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||||||||||||||    
T  1283541 ttgacaccaggtgtcaacggattcgttgacaccaaatc 1283504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 10554557 - 10554594
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||||||||||||||    
T  10554557 ttgacaccaggtgtcaacggattcgttgacaccaaatc 10554594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 28705928 - 28705883
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||    
T  28705928 aggatccgttgacaccaggtgtcaacggattcgttgacactaaatc 28705883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 29087927 - 29087972
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||    
T  29087927 aggatccgttgacaccaggtgtcaacggattcattgacaccaaatc 29087972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 598
Target Start/End: Original strand, 38056791 - 38056840
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||||||  ||||||||||||||||||||||| |||||||||||||    
T  38056791 gagataggatctgttgacaccaggtgtcaacggattggttgacaccaaat 38056840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 598
Target Start/End: Original strand, 14478923 - 14478967
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| |||||| ||||||||||||||||||||||||||||||    
T  14478923 aggatccgttgacatcaggtgtcaacggattcgttgacaccaaat 14478967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 598
Target Start/End: Complemental strand, 19360525 - 19360481
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||    
T  19360525 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 19360481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 555 - 599
Target Start/End: Original strand, 25858213 - 25858257
Alignment:
Q  555 ggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||    
T  25858213 ggatccgttgacactaggtgtcaacggattcgttgacaccaaatc 25858257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 601
Target Start/End: Complemental strand, 38057645 - 38057597
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatcct 601  Q
    |||||||| ||||||| ||||||||||||||| ||||||||||||||||    
T  38057645 taggatccgttgacactaggtgtcaacggattggttgacaccaaatcct 38057597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 17071849 - 17071798
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||| |||||||||||||| |||| ||||||||||||||||||    
T  17071849 agagttaggatccgttgacaccaggtgttaacgaattcgttgacaccaaatc 17071798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 17071225 - 17071271
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||    
T  17071225 taggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatc 17071271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 20854959 - 20854909
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||| ||||| |||||||||||||| || ||||||||||||||||||||    
T  20854959 gagatatgatccgttgacaccaggtgttaatggattcgttgacaccaaatc 20854909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 599
Target Start/End: Original strand, 28705170 - 28705212
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||||||||||||||||||||||| ||||||||||    
T  28705170 atccgttgacaccaggtgtcaacggattcgtttacaccaaatc 28705212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 34600262 - 34600308
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||| |||||||||||| ||||||||||||||||||    
T  34600262 taggatccgttgacatcaggtgtcaacgaattcgttgacaccaaatc 34600308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 548 - 598
Target Start/End: Original strand, 43510228 - 43510278
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| |||||||| |||||||||||||||||| |||||||| |||||||||    
T  43510228 agagttaggatccgttgacaccaggtgtcaacagattcgttaacaccaaat 43510278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 4084882 - 4084927
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||    
T  4084882 aggatccgttgacacctggtgtcaacgaattcgttgacaccaaatc 4084927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 565 - 598
Target Start/End: Complemental strand, 27363812 - 27363779
Alignment:
Q  565 acaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||||||||||||||||||||||||||||||    
T  27363812 acaccaggtgtcaacggattcgttgacaccaaat 27363779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 599
Target Start/End: Complemental strand, 34709078 - 34709041
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||| |||||||||    
T  34709078 ttgacaccaggtgtcaacggattcgttggcaccaaatc 34709041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 599
Target Start/End: Original strand, 36038698 - 36038742
Alignment:
Q  555 ggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||| |||||||||||| |||||||||||||| ||||||||||    
T  36038698 ggatccgttgacaccaggtatcaacggattcgttaacaccaaatc 36038742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 599
Target Start/End: Original strand, 22798905 - 22798948
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| |||| | |||||||||||||||||||||||||||||||    
T  22798905 gatccgttgatatcaggtgtcaacggattcgttgacaccaaatc 22798948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 482 - 517
Target Start/End: Original strand, 35192194 - 35192229
Alignment:
Q  482 ggtgcaaagagctctactgagctggacctccaaatt 517  Q
    |||||||| |||||||||||||||||||||||||||    
T  35192194 ggtgcaaacagctctactgagctggacctccaaatt 35192229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 22213029 - 22212983
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||  ||||| |||||||||||||||||| |||||||||||||    
T  22213029 taggatcagttgacgccaggtgtcaacggattcattgacaccaaatc 22212983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 557 - 599
Target Start/End: Complemental strand, 22799806 - 22799764
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||||||||||||| | ||||||||||||||||||    
T  22799806 atccgttgacaccaggtgtcaatgaattcgttgacaccaaatc 22799764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 33006349 - 33006299
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||  |||||| || ||||||| ||||||||||||||||||||    
T  33006349 gagataggatctgttgacatcaagtgtcaatggattcgttgacaccaaatc 33006299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 7e-20; HSPs: 55)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 24991967 - 24992017
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24991967 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 24992017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 554 - 602
Target Start/End: Complemental strand, 19172625 - 19172577
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19172625 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 19172577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 24992803 - 24992749
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  24992803 gagagagataggatccactgacaccaggtgtcaacggattcgttgacatcaaatc 24992749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 550 - 599
Target Start/End: Complemental strand, 4433901 - 4433852
Alignment:
Q  550 agataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  4433901 agataggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 4433852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 545 - 598
Target Start/End: Complemental strand, 37577704 - 37577651
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| |||||||||||||||| ||||||||||||||||||||||||||||||||    
T  37577704 gagaaagataggatccattgataccaggtgtcaacggattcgttgacaccaaat 37577651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 47967864 - 47967909
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  47967864 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 47967909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 11704859 - 11704813
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  11704859 taggatccattgacaccaagtgtcaacggattcgttgacaccaaatc 11704813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 548 - 598
Target Start/End: Original strand, 17171927 - 17171977
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||    
T  17171927 agagataggatccgttgacaccaggtgtcaacgaattcgttgacaccaaat 17171977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 17172717 - 17172667
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||| |||||||||||||||||||||||||||||| |||||||    
T  17172717 gagataggatccgttgacaccaggtgtcaacggattcgttgacgccaaatc 17172667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 34309285 - 34309235
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  34309285 gagacaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 34309235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 49680812 - 49680858
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  49680812 taggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 49680858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 550 - 599
Target Start/End: Complemental strand, 4439260 - 4439211
Alignment:
Q  550 agataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  4439260 agataggatccgttgacacctggtgtcaacggattcgttgacaccaaatc 4439211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 25468512 - 25468557
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  25468512 aggatccattgacaccaggtgtcaacggattcattgacaccaaatc 25468557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 25469136 - 25469091
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  25469136 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 25469091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 545 - 598
Target Start/End: Original strand, 34308466 - 34308519
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  34308466 gagagagacaggatccgttgacaccaggtgtcaacgtattcgttgacaccaaat 34308519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 553 - 601
Target Start/End: Original strand, 10120784 - 10120832
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatcct 601  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  10120784 taggatccgttgacaccaggtgtcaacggattggttgacaccaaatcct 10120832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 7558445 - 7558496
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||| ||||||||| ||||||||||||| ||||||||||||||    
T  7558445 agagataggatccgttgacaccaagtgtcaacggatttgttgacaccaaatc 7558496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 10121608 - 10121557
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||| ||||||||||||||||||||||| ||||||||||||||    
T  10121608 agagttaggatccgttgacaccaggtgtcaacggattggttgacaccaaatc 10121557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 13262829 - 13262880
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  13262829 agagttaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 13262880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 7559254 - 7559204
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||| |||||||||||||||||||||| |||||||||||||||    
T  7559254 gagacaggatccgttgacaccaggtgtcaacggatccgttgacaccaaatc 7559204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 603
Target Start/End: Complemental strand, 36390418 - 36390368
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatcctat 603  Q
    |||||||| ||||||||||||||||||| || |||||||||||||||||||    
T  36390418 taggatccgttgacaccaggtgtcaacgaatccgttgacaccaaatcctat 36390368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 46812246 - 46812192
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||| ||| | || |||||||||||||||||||||||||||||||||||    
T  46812246 gagagagataagattcgttaacaccaggtgtcaacggattcgttgacaccaaatc 46812192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 13142718 - 13142673
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||| |||||||||||||||||||||||||||||||| ||||    
T  13142718 taggatcccttgacaccaggtgtcaacggattcgttgacactaaat 13142673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 13263566 - 13263521
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||| ||||||||||||||||||||    
T  13263566 aggatccgttgacaccaggtgtcaatggattcgttgacaccaaatc 13263521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 598
Target Start/End: Complemental strand, 27256767 - 27256718
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| ||||||| ||||||||||||||||||| |||||||||||||||||    
T  27256767 gagacaggatccgttgacaccaggtgtcaacgtattcgttgacaccaaat 27256718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 30663360 - 30663405
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||    
T  30663360 aggatccgttgacaccaggtatcaacggattcgttgacaccaaatc 30663405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 30664026 - 30663981
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||    
T  30664026 aggatccgttgacacctggtgtcaacggattcgttgacaccaaatc 30663981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 30932845 - 30932800
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||    
T  30932845 aggatccgttgacaccaggtgtcaacggattcgttggcaccaaatc 30932800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 598
Target Start/End: Complemental strand, 46391921 - 46391872
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| ||||||| ||||||||||||||||||||||||||||||| |||||    
T  46391921 gagacaggatccgttgacaccaggtgtcaacggattcgttgacatcaaat 46391872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 555 - 602
Target Start/End: Original strand, 19171781 - 19171828
Alignment:
Q  555 ggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    |||||| |||||| || |||||||||||||||||||||||||||||||    
T  19171781 ggatccgttgacatcaagtgtcaacggattcgttgacaccaaatccta 19171828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 556 - 603
Target Start/End: Original strand, 45818025 - 45818072
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatcctat 603  Q
    ||||| |||||||||||||||||||||||| |||||||||||| ||||    
T  45818025 gatccgttgacaccaggtgtcaacggattcattgacaccaaattctat 45818072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 168891 - 168937
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||||||||||||| ||||||| |||||||||||||    
T  168891 taggatccgttgacaccaggtgtcagcggattcattgacaccaaatc 168937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 12761547 - 12761501
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  12761547 taggatccattggcaccaggtgtcaacgaattcgttaacaccaaatc 12761501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 7406247 - 7406292
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||||| |||| ||||||||||||||||||    
T  7406247 aggatccgttgacaccaggtgttaacgaattcgttgacaccaaatc 7406292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 8987800 - 8987837
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||| |||||||||||||||||||||||||||||||    
T  8987800 ttgacatcaggtgtcaacggattcgttgacaccaaatc 8987837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 11548802 - 11548847
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||||||||| ||||||||||||| |||||    
T  11548802 aggatccgttgacaccaggtgtcaacagattcgttgacactaaatc 11548847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 553 - 598
Target Start/End: Complemental strand, 27790758 - 27790713
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||||||| |||||||||||||||||||  |||||||||||||    
T  27790758 taggatccattaacaccaggtgtcaacggataggttgacaccaaat 27790713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 28181535 - 28181580
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||| |||||||||| ||||||||||||||||||    
T  28181535 aggatccgttgacacctggtgtcaacgaattcgttgacaccaaatc 28181580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 599
Target Start/End: Complemental strand, 28182114 - 28182077
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||| |||||||||||||    
T  28182114 ttgacaccaggtgtcaacggattctttgacaccaaatc 28182077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 30931898 - 30931935
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||| ||||||||||    
T  30931898 ttgacaccaggtgtcaacggattcgttaacaccaaatc 30931935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 37576921 - 37576974
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    ||||||| |||| |||| ||| |||||||| |||||||||||||||||||||||    
T  37576921 gagatagaatccgttgatacccggtgtcaatggattcgttgacaccaaatccta 37576974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 565 - 670
Target Start/End: Complemental strand, 47969385 - 47969280
Alignment:
Q  565 acaccaggtgtcaacggattcgttgacaccaaatcctattcgtccttttttacatcttaatggttcatatttatttgctttaattgttcacgtgcacact 664  Q
    ||||| |||||||||  |||||||||| ||||||||||| ||||||||||  ||||| || || | | |||| ||  ||||||||||||| ||| | |||    
T  47969385 acacctggtgtcaacaaattcgttgacgccaaatcctatccgtcctttttatcatctcaacggatgacatttgttcactttaattgttcaggtgaagact 47969286  T
Q  665 ctttag 670  Q
    ||||||    
T  47969285 ctttag 47969280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 599
Target Start/End: Complemental strand, 8988589 - 8988553
Alignment:
Q  563 tgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||| |||||||||||||    
T  8988589 tgacaccaggtgtcaacggattccttgacaccaaatc 8988553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 554 - 602
Target Start/End: Original strand, 25671172 - 25671220
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    ||||||| |||||||| ||||| |||||||||||| |||||||||||||    
T  25671172 aggatccgttgacacctggtgttaacggattcgttaacaccaaatccta 25671220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 554 - 598
Target Start/End: Complemental strand, 37853185 - 37853141
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| || ||| ||||||||||||||||||||||||||||||    
T  37853185 aggatccgttaacatcaggtgtcaacggattcgttgacaccaaat 37853141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 32038473 - 32038524
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||  |||| |||||||||||||| ||||||||||||||||||    
T  32038473 agagttaggatcggttgataccaggtgtcaacgaattcgttgacaccaaatc 32038524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 571 - 614
Target Start/End: Original strand, 47968650 - 47968693
Alignment:
Q  571 ggtgtcaacggattcgttgacaccaaatcctattcgtccttttt 614  Q
    |||||||||| ||||||| |||||||||||||| ||||||||||    
T  47968650 ggtgtcaacgaattcgttaacaccaaatcctatccgtccttttt 47968693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 169678 - 169632
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||| |||  |||||||||||||    
T  169678 taggatccgttgacaccaggtgtcaacgaatttattgacaccaaatc 169632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 4134025 - 4134075
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||  |||| |||||||||||  ||||||||||||||||||||    
T  4134025 gagataggatcttttgataccaggtgtcactggattcgttgacaccaaatc 4134075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 43252481 - 43252530
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||| ||||||| ||||||||||||||| ||||||||||||||    
T  43252481 gagatagaatccgttgacac-aggtgtcaacggatttgttgacaccaaatc 43252530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 23026593 - 23026630
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||| |||||||||||||||||||||||| ||||||    
T  23026593 ttgacatcaggtgtcaacggattcgttgacatcaaatc 23026630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 595
Target Start/End: Original strand, 26118675 - 26118716
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacacca 595  Q
    ||||||| |||||||||| |||||||||||| ||||||||||    
T  26118675 aggatccgttgacaccagatgtcaacggatttgttgacacca 26118716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 36389777 - 36389822
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||| |||||||||||||| | ||||||||||||    
T  36389777 aggatccgttgacacctggtgtcaacggatttgctgacaccaaatc 36389822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 46909412 - 46909367
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||| ||||||| ||||| |||||||||||||    
T  46909412 aggatccgttgacaccagatgtcaacagattcattgacaccaaatc 46909367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 50271833 - 50271788
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||| |||| | ||||||||||||||||||    
T  50271833 aggatccgttgacaccaggtatcaatgaattcgttgacaccaaatc 50271788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 48; Significance: 5e-18; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 8488465 - 8488516
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  8488465 agagttaggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 8488516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 10171278 - 10171323
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  10171278 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 10171323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 26529562 - 26529517
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26529562 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 26529517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 10172021 - 10171970
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  10172021 agagttaggatccgttgacaccaggtgtcaacgcattcgttgacaccaaatc 10171970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 545 - 599
Target Start/End: Original strand, 19322975 - 19323030
Alignment:
Q  545 gagagagataggatcca-ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||||||||||||    
T  19322975 gagagagttaggatcccgttgacaccaggtgtcaacggattcgttgacaccaaatc 19323030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 599
Target Start/End: Original strand, 9441230 - 9441284
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||| | |||||||||||||||||||||| |||||||||||||||    
T  9441230 gagagagacaggattcgttgacaccaggtgtcaacggatccgttgacaccaaatc 9441284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 12344895 - 12344941
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||| |||||||||| ||||||||    
T  12344895 taggatccattgacaccaggtgtcaacagattcgttgataccaaatc 12344941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 562 - 608
Target Start/End: Complemental strand, 19311868 - 19311822
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatcctattcgtc 608  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||    
T  19311868 ttgacaccaggtgtcaacggattcgttgacaccaaatcttatccgtc 19311822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 19323821 - 19323771
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  19323821 gagacaggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 19323771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 26528824 - 26528870
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  26528824 taggatccgttgacaccaggtgtcaacgcattcgttgacaccaaatc 26528870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 33436323 - 33436278
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  33436323 aggatccgttgacaccagatgtcaacggattcgttgacaccaaatc 33436278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 548 - 598
Target Start/End: Original strand, 1366964 - 1367014
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||| ||||||| |||||  ||||||||||||||||||||||||||||||    
T  1366964 agagacaggatccgttgacttcaggtgtcaacggattcgttgacaccaaat 1367014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 33435341 - 33435387
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||||| ||||| |||||||||||||||||||||||    
T  33435341 taggatccgttgacacctggtgttaacggattcgttgacaccaaatc 33435387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 8489329 - 8489284
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||| ||||||| ||||||||||    
T  8489329 aggatccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 8489284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 18227734 - 18227778
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  18227734 aggatccgttgacaccag-tgtcaacggattcgttgacaccaaatc 18227778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 19311003 - 19311048
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||||| |||||||| ||||||||||||||    
T  19311003 aggatccgttgacaccaggtgttaacggatttgttgacaccaaatc 19311048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 3623171 - 3623222
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||| |||||| |||||||||||| |||| |||||||||||||    
T  3623171 agagttaggatccgttgacatcaggtgtcaacgaattctttgacaccaaatc 3623222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 3623797 - 3623751
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||||||| ||| |||| ||||||||||||||||||    
T  3623797 taggatccgttgacaccagatgttaacgaattcgttgacaccaaatc 3623751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 21133277 - 21133231
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||| |||| |||| ||||||||||||||||||    
T  21133277 taggatccgttgacaccatgtgttaacgaattcgttgacaccaaatc 21133231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 25060817 - 25060863
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||||||||||||||| |||||||| |||| |||||    
T  25060817 taggatccgttgacaccaggtgtcaacagattcgttaacacaaaatc 25060863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 549 - 598
Target Start/End: Original strand, 2512435 - 2512484
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| ||||||| |||||||| | |||||||| |||||||||||||||||    
T  2512435 gagacaggatccgttgacacctgatgtcaacgaattcgttgacaccaaat 2512484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 5861896 - 5861933
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  5861896 ttgacaccaggtgccaacagattcgttgacaccaaatc 5861933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 598
Target Start/End: Complemental strand, 9442026 - 9441985
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| |||||| |||||||||||||||||||| |||||||||    
T  9442026 atccgttgacatcaggtgtcaacggattcgttcacaccaaat 9441985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 557 - 598
Target Start/End: Complemental strand, 9442107 - 9442066
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| |||||| |||||||||||||||||||| |||||||||    
T  9442107 atccgttgacatcaggtgtcaacggattcgttcacaccaaat 9442066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 24608372 - 24608319
Alignment:
Q  463 acagggccggccatgagacgg-tgcaaagagctctactgagctggacctccaaa 515  Q
    |||||||||||||||||  || |||||| |||||||||||||||| ||||||||    
T  24608372 acagggccggccatgaggggggtgcaaacagctctactgagctgggcctccaaa 24608319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 5e-18; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 55000684 - 55000735
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  55000684 agagataggatccattgacaccagatgtcaacggattcgttgacaccaaatc 55000735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 24551978 - 24551928
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  24551978 gagataggatccattgacaccaggtgtcaacggatttgttgacaccaaatc 24551928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 545 - 598
Target Start/End: Original strand, 2444366 - 2444419
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  2444366 gagagagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 2444419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 20774230 - 20774185
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  20774230 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 20774185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 545 - 602
Target Start/End: Original strand, 24551689 - 24551746
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  24551689 gagagagagaggatccattgacaccaggtgtcgacggattcgttgacatcaaatccta 24551746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 30573759 - 30573714
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  30573759 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 30573714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 47688535 - 47688484
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||    
T  47688535 agagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 47688484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 552 - 599
Target Start/End: Complemental strand, 55977007 - 55976960
Alignment:
Q  552 ataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  55977007 ataggatccatcgacaccaggtgtcaacggattcgttgacaccaaatc 55976960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 3654574 - 3654520
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||| ||||| ||||||||||||||||||||||||||||||||    
T  3654574 gagagagagaggatccgttgacgccaggtgtcaacggattcgttgacaccaaatc 3654520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 26159680 - 26159626
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||| |||||| || ||||||||||||||||||||||||||||    
T  26159680 gagagagataggatccgttgacatcaagtgtcaacggattcgttgacaccaaatc 26159626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 554 - 600
Target Start/End: Original strand, 53147874 - 53147920
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatcc 600  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||    
T  53147874 aggatccattgacaccagatgtcaacggattcgttgacaccaaatcc 53147920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 548 - 598
Target Start/End: Original strand, 53772804 - 53772854
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  53772804 agagttaggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 53772854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 24158870 - 24158825
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  24158870 aggatccattgacaccaggtgtcaacagattcgttgacaccaaatc 24158825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 554 - 598
Target Start/End: Original strand, 19550289 - 19550333
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| |||||||||||||||||||||||||||||||||||||    
T  19550289 aggatcccttgacaccaggtgtcaacggattcgttgacaccaaat 19550333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 554 - 602
Target Start/End: Complemental strand, 31329767 - 31329719
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  31329767 aggatccgttgacaccaggtgtcaacggattcgttaacaccaaatccta 31329719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 552 - 599
Target Start/End: Complemental strand, 599353 - 599306
Alignment:
Q  552 ataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||| |||||||| |||||||||||||||||||||||||||||    
T  599353 ataggatccgttgacacctggtgtcaacggattcgttgacaccaaatc 599306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 548 - 599
Target Start/End: Complemental strand, 42882737 - 42882686
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||||||||    
T  42882737 agagttaggatccgttgacaccagatgtcaacggattcgttgacaccaaatc 42882686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 599
Target Start/End: Original strand, 52871303 - 52871346
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  52871303 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 52871346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 26147083 - 26147037
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  26147083 taggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 26147037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 47785858 - 47785804
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||  ||||||  ||||||||||||||||||||||||||||||||||||||    
T  47785858 gagagagtcaggatctgttgacaccaggtgtcaacggattcgttgacaccaaatc 47785804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 53732433 - 53732483
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||| |||||||||||||||||||||||||||||||| |||||    
T  53732433 gagacaggatccgttgacaccaggtgtcaacggattcgttgacactaaatc 53732483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 53773637 - 53773591
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||| |||||||||||||||||||||||||||||||    
T  53773637 taggatccgttgacatcaggtgtcaacggattcgttgacaccaaatc 53773591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 557 - 599
Target Start/End: Original strand, 55976172 - 55976214
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||||||||||||||||||||||||||||||||||    
T  55976172 atccgttgacaccaggtgtcaacggattcgttgacaccaaatc 55976214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 7842579 - 7842534
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||    
T  7842579 aggatccattgacatcaggtgtcaacgaattcgttgacaccaaatc 7842534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 8248570 - 8248525
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  8248570 aggatccgttgacaccagatgtcaacggattcgttgacaccaaatc 8248525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 8266235 - 8266190
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||    
T  8266235 aggatccgttgacaccagatgtcaacggattcgttgacaccaaatc 8266190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 599
Target Start/End: Complemental strand, 16903685 - 16903648
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||||||||||||||    
T  16903685 ttgacaccaggtgtcaacggattcgttgacaccaaatc 16903648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 549 - 598
Target Start/End: Original strand, 19080383 - 19080432
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| ||||||  |||||||||||||||||||||||||||||||||||||    
T  19080383 gagacaggatctgttgacaccaggtgtcaacggattcgttgacaccaaat 19080432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 44792686 - 44792641
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||| ||||||| ||||||||||    
T  44792686 aggatccattgacaccaggtgtcaacgaattcgttaacaccaaatc 44792641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 53148661 - 53148616
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||    
T  53148661 aggatccattgacatcaggtgtcaacagattcgttgacaccaaatc 53148616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 561 - 598
Target Start/End: Complemental strand, 53733774 - 53733737
Alignment:
Q  561 attgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||||||||||||||||||||||||||||||||||    
T  53733774 attgacaccaggtgtcaacggattcgttgacaccaaat 53733737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 552 - 599
Target Start/End: Complemental strand, 5046534 - 5046487
Alignment:
Q  552 ataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||| |||||||||||| ||||| |||||||||||||||||||    
T  5046534 ataggatccgttgacaccaggtatcaacagattcgttgacaccaaatc 5046487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 557 - 639
Target Start/End: Original strand, 12919591 - 12919674
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaatcctattcgtccttt-tttacatcttaatggttcatatttatt 639  Q
    |||| |||||||||||||||||||| |||||| ||||||||||||| || |  ||| |||  |||||||||||||| |||||||    
T  12919591 atccgttgacaccaggtgtcaacgggttcgttaacaccaaatcctaatcattatttgttttgatcttaatggttcacatttatt 12919674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 556 - 599
Target Start/End: Complemental strand, 55001488 - 55001445
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| |||||||||||||||||||||||||||||||| |||||    
T  55001488 gatccgttgacaccaggtgtcaacggattcgttgacactaaatc 55001445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 56262475 - 56262526
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  56262475 agagacaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatc 56262526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 142579 - 142529
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||| |||||||| |||||||||| |||| |||||||||||||    
T  142579 gagataggatccgttgacaccgggtgtcaacgaattcattgacaccaaatc 142529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 2446212 - 2446166
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||||||||||||||| |||||||| ||||||||||    
T  2446212 taggatccgttgacaccaggtgtcaacagattcgttaacaccaaatc 2446166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 40347552 - 40347602
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||||||||||||||||||||||| || |||| ||||||||||    
T  40347552 gagacaggatccattgacaccaggtgtcaacgaatccgtttacaccaaatc 40347602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 47687911 - 47687957
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||||||||||| |||| ||||||||||||||||||    
T  47687911 taggatccgttgacaccaggtgttaacgaattcgttgacaccaaatc 47687957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 7841547 - 7841592
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||| ||||||| |||||||||||||||||||||||    
T  7841547 aggatccgttgacatcaggtgttaacggattcgttgacaccaaatc 7841592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 8247699 - 8247744
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||| ||||||||||||||||||||||| |||||    
T  8247699 aggatccgttgacacctggtgtcaacggattcgttgacacaaaatc 8247744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 599
Target Start/End: Complemental strand, 9365858 - 9365821
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||| |||||||||||||    
T  9365858 ttgacaccaggtgtcaacggattcattgacaccaaatc 9365821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 595
Target Start/End: Complemental strand, 16903710 - 16903677
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacacca 595  Q
    ||||||||||||||||||||||||||||||||||    
T  16903710 ttgacaccaggtgtcaacggattcgttgacacca 16903677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 24374792 - 24374837
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  24374792 aggatccgttgacaccagctgtcaacgaattcgttgacaccaaatc 24374837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 599
Target Start/End: Complemental strand, 43146690 - 43146653
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||| |||||||||||||    
T  43146690 ttgacaccaggtgtcaacggattccttgacaccaaatc 43146653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 44791727 - 44791772
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  44791727 aggatccattggcaccaggtgtcaacgaattcgttaacaccaaatc 44791772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 599
Target Start/End: Original strand, 8265365 - 8265409
Alignment:
Q  555 ggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||| |||||||| ||||||||||||||||||||||| |||||    
T  8265365 ggatccgttgacacctggtgtcaacggattcgttgacacaaaatc 8265409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 567 - 599
Target Start/End: Original strand, 32088835 - 32088867
Alignment:
Q  567 accaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||||||||    
T  32088835 accaggtgtcaacggattcgttgacaccaaatc 32088867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 563 - 599
Target Start/End: Original strand, 44469504 - 44469540
Alignment:
Q  563 tgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||| ||||||||||||||||||    
T  44469504 tgacaccaggtgtcaacgaattcgttgacaccaaatc 44469540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 464 - 515
Target Start/End: Original strand, 3850595 - 3850646
Alignment:
Q  464 cagggccggccatgagacggtgcaaagagctctactgagctggacctccaaa 515  Q
    ||||||||||||||||  |||||||| |||| ||||||||||| ||||||||    
T  3850595 cagggccggccatgagggggtgcaaacagctatactgagctgggcctccaaa 3850646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 597
Target Start/End: Original strand, 40495098 - 40495141
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaa 597  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||    
T  40495098 aggatccgttgacaccaggtgtcaacaaattcgttgacaccaaa 40495141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 548 - 599
Target Start/End: Original strand, 42880905 - 42880956
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||  ||||||||||||| |||| |||||||||||||||||||    
T  42880905 agagatatgatctgttgacaccaggtgacaacagattcgttgacaccaaatc 42880956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 555 - 598
Target Start/End: Original strand, 50184432 - 50184475
Alignment:
Q  555 ggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||| |||| | ||||||||||||||||||||||||||||||    
T  50184432 ggatccgttgatatcaggtgtcaacggattcgttgacaccaaat 50184475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 1866345 - 1866391
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||| ||||||||| | ||||||||||||||||||    
T  1866345 taggatccgttgacactaggtgtcaatgaattcgttgacaccaaatc 1866391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 569 - 599
Target Start/End: Original strand, 5046002 - 5046032
Alignment:
Q  569 caggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||||||    
T  5046002 caggtgtcaacggattcgttgacaccaaatc 5046032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 565 - 599
Target Start/End: Original strand, 11938725 - 11938759
Alignment:
Q  565 acaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||| ||||||||||||||||||    
T  11938725 acaccaggtgtcaacgaattcgttgacaccaaatc 11938759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 11939492 - 11939446
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||||  |||||||||||||||||||||| |||||    
T  11939492 taggatccgttgacacctagtgtcaacggattcgttgacacgaaatc 11939446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 12920329 - 12920279
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||  |||||||||||| | ||| |||||||||||||||||||    
T  12920329 gagataggatcggttgacaccaggtattaacagattcgttgacaccaaatc 12920279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 56263127 - 56263077
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||| ||||||||||||||||||||||| || |||| ||||||||||    
T  56263127 gagacaggttccattgacaccaggtgtcaacgaatccgtttacaccaaatc 56263077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 1465323 - 1465368
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||||||||||||| ||||| |||||| ||||||    
T  1465323 aggatccgttgacaccaggtgtcaacagattcattgacatcaaatc 1465368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 9365172 - 9365217
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| || |||||||||||||||| ||| ||||||||||||||    
T  9365172 aggatccgttaacaccaggtgtcaacgaatttgttgacaccaaatc 9365217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 553 - 602
Target Start/End: Original strand, 46168140 - 46168189
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    |||||||| |||||| |||||||||||||| | |||||||| ||||||||    
T  46168140 taggatccgttgacatcaggtgtcaacggaattgttgacactaaatccta 46168189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0093 (Bit Score: 47; Significance: 2e-17; HSPs: 1)
Name: scaffold0093
Description:

Target: scaffold0093; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 23787 - 23733
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  23787 gagagagttaggatccattgacaccagttgtcaacggattcgttgacaccaaatc 23733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 2e-17; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 17604016 - 17603966
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17604016 gagataggatccaatgacaccaggtgtcaacggattcgttgacaccaaatc 17603966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 557 - 639
Target Start/End: Original strand, 20212986 - 20213068
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaatcctattcgtccttttttacatcttaatggttcatatttatt 639  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||| ||| ||||||| ||||| || |||| | |||||||    
T  20212986 atccgttgacaccaggtgtcaacgaattcgttgacaccaaatcctatccgttcttttttccatctcaacggttgacatttatt 20213068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 552 - 599
Target Start/End: Original strand, 17603169 - 17603216
Alignment:
Q  552 ataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17603169 ataggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 17603216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 556 - 639
Target Start/End: Complemental strand, 40872856 - 40872773
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatcctattcgtccttttttacatcttaatggttcatatttatt 639  Q
    ||||| |||||||||||||||||||||||| |||||||||||| |||| ||| ||||||| ||||| || |||| | |||||||    
T  40872856 gatccgttgacaccaggtgtcaacggattcattgacaccaaattctatccgttcttttttccatctcaacggttgacatttatt 40872773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 599
Target Start/End: Complemental strand, 21727584 - 21727534
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  21727584 gagacaggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 21727534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 549 - 599
Target Start/End: Original strand, 46149627 - 46149677
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  46149627 gagatgggatccattgacaccaggtgtcaatggattcgttgacaccaaatc 46149677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 549 - 602
Target Start/End: Original strand, 11652291 - 11652344
Alignment:
Q  549 gagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    |||||| |||||||| ||| ||||||||||||||||||||||||||||||||||    
T  11652291 gagatatgatccattaacatcaggtgtcaacggattcgttgacaccaaatccta 11652344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 550 - 599
Target Start/End: Original strand, 31974650 - 31974699
Alignment:
Q  550 agataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  31974650 agataggatccgttgacaccaagtgtcaacggattcgttgacaccaaatc 31974699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 37988268 - 37988223
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||    
T  37988268 aggatccattgacaccaggtgtcaacgaattcgttgacaccaaatc 37988223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 48648206 - 48648251
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  48648206 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 48648251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 48649223 - 48649178
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  48649223 aggatccattgacaccaggtgtcaacagattcgttgacaccaaatc 48649178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 48765120 - 48765075
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  48765120 aggatccattgacaccaggtgtcaatggattcgttgacaccaaatc 48765075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 554 - 602
Target Start/End: Original strand, 27082779 - 27082827
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    ||||||||||||||| ||||||||||| |||||||||||||||||||||    
T  27082779 aggatccattgacactaggtgtcaacgaattcgttgacaccaaatccta 27082827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 556 - 599
Target Start/End: Complemental strand, 265146 - 265103
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| ||||||||||||||||||||||||||||||||||||||    
T  265146 gatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 265103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 552 - 599
Target Start/End: Complemental strand, 11654081 - 11654034
Alignment:
Q  552 ataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||    
T  11654081 ataggatccattgacaccagatctcaacggattcgttgacaccaaatc 11654034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 599
Target Start/End: Original strand, 264468 - 264514
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||    
T  264468 taggatccattgacaccaggtgtcaatggatttgttgacaccaaatc 264514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 545 - 599
Target Start/End: Complemental strand, 48507091 - 48507037
Alignment:
Q  545 gagagagataggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| ||||||| ||||||||||||||||| | ||||||||||||||||||    
T  48507091 gagagagacaggatccgttgacaccaggtgtcaatgaattcgttgacaccaaatc 48507037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 14871156 - 14871201
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  14871156 aggatccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 14871201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 46150779 - 46150734
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||    
T  46150779 aggatccgttgacactaggtgtcaacggattcgttgacaccaaatc 46150734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 48413330 - 48413367
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||||||||||||||||||||||    
T  48413330 ttgacaccaggtgtcaacggattcgttgacaccaaatc 48413367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 48764480 - 48764525
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||    
T  48764480 aggatccattgacatcaggtgtcaacgaattcgttgacaccaaatc 48764525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 602
Target Start/End: Original strand, 13477060 - 13477108
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    ||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  13477060 aggatccgttgacaccaggtgtcaacgaattcattgacaccaaatccta 13477108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 598
Target Start/End: Original strand, 17605717 - 17605753
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||||||||||||||||||||||||||||||||    
T  17605717 ttgacaccaggtgtcaacggattcgttgacaccaaat 17605753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 602
Target Start/End: Complemental strand, 20213581 - 20213533
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    ||||||| ||||||||||||||| ||| |||||||||||||||||||||    
T  20213581 aggatccgttgacaccaggtgtcgacgaattcgttgacaccaaatccta 20213533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 553 - 601
Target Start/End: Complemental strand, 54458716 - 54458668
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatcct 601  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||||||    
T  54458716 taggatccgttgacacctggtgtcaacggattggttgacaccaaatcct 54458668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 562 - 598
Target Start/End: Complemental strand, 55373748 - 55373712
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||||||||||||||||||||||||||||||||||||    
T  55373748 ttgacaccaggtgtcaacggattcgttgacaccaaat 55373712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 556 - 599
Target Start/End: Complemental strand, 6974791 - 6974748
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||    
T  6974791 gatccattgccaccatgtgtcaacggattcgttgacaccaaatc 6974748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 563 - 598
Target Start/End: Complemental strand, 44699861 - 44699826
Alignment:
Q  563 tgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||||||||||||||||||||||||||||||||    
T  44699861 tgacaccaggtgtcaacggattcgttgacaccaaat 44699826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 557 - 599
Target Start/End: Original strand, 981673 - 981715
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||||||||||||||| ||||||||||||||||||    
T  981673 atccgttgacaccaggtgtcaacgaattcgttgacaccaaatc 981715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 556 - 598
Target Start/End: Original strand, 37987238 - 37987280
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||| ||||||||||||||||| |||||||||||||||||||    
T  37987238 gatccgttgacaccaggtgtcaatggattcgttgacaccaaat 37987280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 51469330 - 51469284
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||| |||||| || ||||||||||||||||||||||||||||    
T  51469330 taggatccgttgacatcaagtgtcaacggattcgttgacaccaaatc 51469284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 599
Target Start/End: Complemental strand, 13477820 - 13477783
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  13477820 ttgacaccaggtgtcaacgaattcgttgacaccaaatc 13477783  T

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Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 37520611 - 37520566
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||    
T  37520611 aggatccgttgataccaggtgtcaacgaattcgttgacaccaaatc 37520566  T

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Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 41458044 - 41458081
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| |||||||||||||||||||||||||||||||||    
T  41458044 ttgataccaggtgtcaacggattcgttgacaccaaatc 41458081  T

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Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 45081453 - 45081408
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||  ||||||||||||||||||||||||||||    
T  45081453 aggatccgttgacacctagtgtcaacggattcgttgacaccaaatc 45081408  T

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Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 557 - 598
Target Start/End: Complemental strand, 52282459 - 52282418
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| |||||||||||||||||||||||| ||||||||||||    
T  52282459 atccgttgacaccaggtgtcaacggattcattgacaccaaat 52282418  T

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Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 463 - 515
Target Start/End: Complemental strand, 25373691 - 25373639
Alignment:
Q  463 acagggccggccatgagacggtgcaaagagctctactgagctggacctccaaa 515  Q
    ||||||||| |||||||  |||||||| |||||||||||||||| ||||||||    
T  25373691 acagggccgaccatgagggggtgcaaacagctctactgagctgggcctccaaa 25373639  T

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Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 555 - 599
Target Start/End: Complemental strand, 31115648 - 31115604
Alignment:
Q  555 ggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||| ||||||| |||||||||| |||||||||||||||||||    
T  31115648 ggatccgttgacactaggtgtcaacagattcgttgacaccaaatc 31115604  T

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Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 599
Target Start/End: Complemental strand, 51827542 - 51827499
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| |||||||| ||||||||||||||||||| |||||||||    
T  51827542 gatccgttgacacctggtgtcaacggattcgttgtcaccaaatc 51827499  T

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Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 556 - 602
Target Start/End: Complemental strand, 10847957 - 10847911
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatccta 602  Q
    ||||| || ||||||||||||||| ||||| ||||||||||||||||    
T  10847957 gatccgttaacaccaggtgtcaacagattcattgacaccaaatccta 10847911  T

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Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 557 - 599
Target Start/End: Complemental strand, 33277551 - 33277509
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||| ||||||||||||||||||| ||||||| ||||||||||    
T  33277551 atccgttgacaccaggtgtcaacgaattcgttaacaccaaatc 33277509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 29856063 - 29856100
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||| | |||||||||||||||||||||||||||||    
T  29856063 ttgacagctggtgtcaacggattcgttgacaccaaatc 29856100  T

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Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 562 - 599
Target Start/End: Original strand, 51826548 - 51826585
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||| |||||||||||||||| ||||||||||    
T  51826548 ttgacaccagatgtcaacggattcgttaacaccaaatc 51826585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 52266503 - 52266458
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| || ||||||||||| |||| ||||||||||||||||||    
T  52266503 aggatccgttaacaccaggtgttaacgaattcgttgacaccaaatc 52266458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0085 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 4)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 548 - 598
Target Start/End: Complemental strand, 22126 - 22076
Alignment:
Q  548 agagataggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||    
T  22126 agagacaggatccgttgacaccaggtgtcaacggattcgttgacaccaaat 22076  T

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Target: scaffold0085; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 562 - 599
Target Start/End: Complemental strand, 15900 - 15863
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  15900 ttgacaccaggtgtcaacgaattcgttgacaccaaatc 15863  T

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Target: scaffold0085; HSP #3
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 15025 - 15070
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||  |||||||||||||| |||||||||||||    
T  15025 aggatccgttgacacctagtgtcaacggattcattgacaccaaatc 15070  T

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Target: scaffold0085; HSP #4
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 15084 - 15129
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||  |||||||||||||| |||||||||||||    
T  15084 aggatccgttgacacctagtgtcaacggattcattgacaccaaatc 15129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2007 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold2007
Description:

Target: scaffold2007; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 753 - 798
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||| |||||||||||||||||||||||||    
T  753 aggatccattgacaccaggtttcaacggattcgttgacaccaaatc 798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 554 - 599
Target Start/End: Original strand, 26594 - 26639
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||    
T  26594 aggatccgttgacaccaggtgtcaacggattcgttgacaccaaatc 26639  T

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Target: scaffold0164 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0164
Description:

Target: scaffold0164; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 554 - 685
Target Start/End: Original strand, 11673 - 11804
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatcctattcgtccttttttacatcttaatggttcatatttatttgctttaattgttc 653  Q
    ||||||| |||||| ||| | |||||| ||| |||||||||||||||||| ||||||||||  ||||| || || | | |||||||  ||||||||||||    
T  11673 aggatccgttgacatcagatttcaacgaattagttgacaccaaatcctatccgtcctttttatcatctcaacggatgaaatttattcactttaattgttc 11772  T
Q  654 acgtgcacactctttaggagataaatgaaatc 685  Q
    | ||  | |||||||||  |||||| ||||||    
T  11773 aggtaaagactctttagcggataaaagaaatc 11804  T

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Target: scaffold0086 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 553 - 599
Target Start/End: Complemental strand, 8342 - 8296
Alignment:
Q  553 taggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    |||||||||||||||||||||||||||| ||||||| ||||||||||    
T  8342 taggatccattgacaccaggtgtcaacgtattcgttaacaccaaatc 8296  T

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Target: scaffold0096 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 557 - 598
Target Start/End: Original strand, 39901 - 39942
Alignment:
Q  557 atccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    |||| |||||||||||||||||||||||||||||||||||||    
T  39901 atccgttgacaccaggtgtcaacggattcgttgacaccaaat 39942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0504 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 554 - 598
Target Start/End: Complemental strand, 5429 - 5385
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaat 598  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||    
T  5429 aggatccgttgacaccaggtgtcaacggatttgttgacaccaaat 5385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1207 (Bit Score: 35; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1207
Description:

Target: scaffold1207; HSP #1
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 562 - 600
Target Start/End: Original strand, 1597 - 1635
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacaccaaatcc 600  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  1597 ttgacaccaggtgtcaacgaattcgttgacaccaaatcc 1635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1213 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold1213
Description:

Target: scaffold1213; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 556 - 599
Target Start/End: Original strand, 1900 - 1943
Alignment:
Q  556 gatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||| |||||| ||| |||||||||||||||||||||||||||    
T  1900 gatccgttgacagcagatgtcaacggattcgttgacaccaaatc 1943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0418 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0418
Description:

Target: scaffold0418; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 554 - 597
Target Start/End: Complemental strand, 6934 - 6891
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaa 597  Q
    ||||||| ||||||||||||||||||  ||||||||||||||||    
T  6934 aggatccgttgacaccaggtgtcaacaaattcgttgacaccaaa 6891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 562 - 593
Target Start/End: Original strand, 181020 - 181051
Alignment:
Q  562 ttgacaccaggtgtcaacggattcgttgacac 593  Q
    ||||||||||||||||||||||||||||||||    
T  181020 ttgacaccaggtgtcaacggattcgttgacac 181051  T

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Target: scaffold0002 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 554 - 599
Target Start/End: Complemental strand, 428951 - 428906
Alignment:
Q  554 aggatccattgacaccaggtgtcaacggattcgttgacaccaaatc 599  Q
    ||||||| |||||||| ||| |||||| ||||||||||||||||||    
T  428951 aggatccgttgacacccggtatcaacgaattcgttgacaccaaatc 428906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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