View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7969_low_1 (Length: 900)

Name: NF7969_low_1
Description: NF7969
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7969_low_1
NF7969_low_1
[»] scaffold0028 (3 HSPs)
scaffold0028 (399-554)||(35270-35425)
scaffold0028 (621-727)||(127721-127827)
scaffold0028 (633-707)||(110162-110236)
[»] chr7 (54 HSPs)
chr7 (400-554)||(34651869-34652023)
chr7 (402-554)||(38235905-38236055)
chr7 (402-554)||(7666982-7667135)
chr7 (402-554)||(28437359-28437512)
chr7 (399-554)||(41002067-41002221)
chr7 (400-554)||(33113459-33113609)
chr7 (402-554)||(43188968-43189120)
chr7 (404-554)||(47275821-47275972)
chr7 (418-554)||(5967887-5968023)
chr7 (399-543)||(23620610-23620753)
chr7 (405-556)||(36747405-36747560)
chr7 (451-554)||(42620220-42620322)
chr7 (632-808)||(11673941-11674117)
chr7 (418-554)||(19644403-19644542)
chr7 (447-554)||(44720192-44720298)
chr7 (402-544)||(3658329-3658471)
chr7 (449-554)||(33810078-33810182)
chr7 (449-554)||(43665035-43665139)
chr7 (449-554)||(33406497-33406602)
chr7 (621-767)||(39426441-39426587)
chr7 (449-554)||(42220151-42220255)
chr7 (449-546)||(39410244-39410337)
chr7 (431-554)||(46449283-46449410)
chr7 (466-554)||(43778457-43778545)
chr7 (607-793)||(3850517-3850702)
chr7 (627-746)||(31206622-31206741)
chr7 (632-746)||(31210076-31210190)
chr7 (452-541)||(16568622-16568710)
chr7 (452-541)||(16596952-16597040)
chr7 (623-700)||(22301143-22301220)
chr7 (455-553)||(12863525-12863622)
chr7 (481-554)||(4787900-4787973)
chr7 (455-554)||(18789008-18789106)
chr7 (481-540)||(46611781-46611839)
chr7 (402-543)||(23465818-23465959)
chr7 (400-548)||(42112774-42112923)
chr7 (481-554)||(36845339-36845411)
chr7 (398-448)||(3658674-3658724)
chr7 (504-554)||(22556624-22556674)
chr7 (399-448)||(7667328-7667377)
chr7 (502-543)||(48935094-48935135)
chr7 (710-806)||(5434941-5435037)
chr7 (451-543)||(14676352-14676443)
chr7 (400-448)||(42854118-42854166)
chr7 (400-450)||(20513524-20513574)
chr7 (454-528)||(23552313-23552387)
chr7 (504-554)||(24923314-24923364)
chr7 (504-554)||(41471549-41471599)
chr7 (484-554)||(42266908-42266977)
chr7 (481-543)||(45510464-45510525)
chr7 (453-498)||(3591828-3591873)
chr7 (504-541)||(38138055-38138092)
chr7 (402-439)||(44690089-44690126)
chr7 (475-556)||(46509374-46509454)
[»] chr1 (75 HSPs)
chr1 (399-556)||(15463920-15464077)
chr1 (403-554)||(13255455-13255605)
chr1 (398-554)||(33991652-33991809)
chr1 (406-554)||(11017712-11017860)
chr1 (399-554)||(1523706-1523861)
chr1 (406-554)||(13061218-13061367)
chr1 (402-554)||(32300166-32300318)
chr1 (402-554)||(2925755-2925905)
chr1 (399-554)||(50247707-50247862)
chr1 (402-554)||(1688035-1688187)
chr1 (401-554)||(42161871-42162023)
chr1 (399-554)||(896312-896465)
chr1 (400-554)||(23871279-23871433)
chr1 (402-554)||(32299213-32299366)
chr1 (402-554)||(45565241-45565392)
chr1 (397-554)||(2175445-2175604)
chr1 (404-554)||(47905511-47905659)
chr1 (622-807)||(12141643-12141828)
chr1 (623-811)||(24981154-24981342)
chr1 (400-554)||(50402852-50403007)
chr1 (402-554)||(27500095-27500247)
chr1 (431-554)||(39889505-39889628)
chr1 (449-554)||(42488492-42488597)
chr1 (449-554)||(12293923-12294027)
chr1 (399-541)||(26940703-26940845)
chr1 (396-554)||(43571781-43571935)
chr1 (431-554)||(17675307-17675428)
chr1 (402-527)||(38795103-38795228)
chr1 (399-554)||(47206238-47206394)
chr1 (425-529)||(8156187-8156291)
chr1 (406-554)||(51246398-51246544)
chr1 (400-554)||(26756972-26757125)
chr1 (431-536)||(7965569-7965673)
chr1 (656-793)||(1953643-1953780)
chr1 (406-534)||(7401388-7401516)
chr1 (632-808)||(47580335-47580513)
chr1 (402-554)||(50476639-50476791)
chr1 (449-548)||(40707068-40707168)
chr1 (621-707)||(9111531-9111617)
chr1 (400-524)||(30538589-30538713)
chr1 (449-554)||(17688450-17688558)
chr1 (431-554)||(36668497-36668619)
chr1 (448-554)||(938112-938221)
chr1 (486-554)||(14153222-14153289)
chr1 (454-548)||(9173620-9173713)
chr1 (484-554)||(30543264-30543333)
chr1 (621-746)||(4242559-4242684)
chr1 (627-793)||(51465452-51465606)
chr1 (402-527)||(39508906-39509031)
chr1 (561-609)||(1953828-1953876)
chr1 (452-543)||(28773257-28773350)
chr1 (559-609)||(26310467-26310517)
chr1 (556-609)||(4242473-4242526)
chr1 (397-450)||(9595776-9595829)
chr1 (561-609)||(12141561-12141609)
chr1 (502-554)||(26345736-26345788)
chr1 (399-554)||(33579364-33579519)
chr1 (502-554)||(41432680-41432732)
chr1 (559-609)||(51465645-51465693)
chr1 (453-543)||(28748312-28748401)
chr1 (402-448)||(39179269-39179315)
chr1 (504-554)||(42806281-42806331)
chr1 (505-551)||(51303096-51303142)
chr1 (665-777)||(39197184-39197297)
chr1 (481-554)||(52073356-52073428)
chr1 (502-554)||(1278580-1278632)
chr1 (502-554)||(34918660-34918712)
chr1 (503-554)||(36269854-36269905)
chr1 (514-556)||(1063445-1063487)
chr1 (512-554)||(1071083-1071125)
chr1 (504-554)||(4204700-4204750)
chr1 (508-554)||(5883528-5883574)
chr1 (402-448)||(26940478-26940524)
chr1 (398-448)||(28718955-28719005)
chr1 (504-554)||(43530218-43530268)
[»] chr6 (22 HSPs)
chr6 (398-554)||(29241647-29241803)
chr6 (400-554)||(23094945-23095098)
chr6 (402-554)||(5825443-5825595)
chr6 (402-554)||(26574213-26574365)
chr6 (406-554)||(24734991-24735141)
chr6 (406-554)||(26480953-26481101)
chr6 (397-554)||(31345182-31345341)
chr6 (402-555)||(4909698-4909852)
chr6 (410-554)||(34914738-34914882)
chr6 (632-790)||(19697846-19698004)
chr6 (400-554)||(1029404-1029557)
chr6 (556-609)||(6591754-6591807)
chr6 (621-720)||(6591839-6591938)
chr6 (716-807)||(15517982-15518073)
chr6 (484-554)||(16329490-16329559)
chr6 (559-609)||(19976209-19976259)
chr6 (502-554)||(33212431-33212483)
chr6 (399-446)||(2365762-2365809)
chr6 (485-540)||(5613552-5613606)
chr6 (503-554)||(8439314-8439365)
chr6 (402-448)||(26713735-26713781)
chr6 (504-554)||(29054678-29054728)
[»] chr3 (60 HSPs)
chr3 (402-554)||(49860947-49861099)
chr3 (404-554)||(47434114-47434264)
chr3 (402-554)||(41961795-41961947)
chr3 (399-554)||(47789261-47789416)
chr3 (400-554)||(43237401-43237555)
chr3 (406-556)||(49682824-49682973)
chr3 (402-554)||(30121340-30121492)
chr3 (397-554)||(38515348-38515505)
chr3 (402-554)||(3042946-3043098)
chr3 (399-554)||(39499309-39499464)
chr3 (403-555)||(55445017-55445171)
chr3 (431-554)||(23163634-23163757)
chr3 (431-554)||(25428779-25428901)
chr3 (402-554)||(44411972-44412125)
chr3 (406-554)||(47714492-47714643)
chr3 (402-554)||(17642700-17642852)
chr3 (406-554)||(46017316-46017464)
chr3 (402-554)||(36796535-36796688)
chr3 (402-554)||(30131704-30131856)
chr3 (402-554)||(43007346-43007492)
chr3 (446-554)||(2420770-2420877)
chr3 (421-554)||(7661147-7661282)
chr3 (410-547)||(34306715-34306852)
chr3 (401-554)||(55439695-55439849)
chr3 (449-554)||(33982605-33982709)
chr3 (441-554)||(38526264-38526376)
chr3 (397-533)||(45555769-45555908)
chr3 (443-534)||(27055772-27055863)
chr3 (462-554)||(46312298-46312390)
chr3 (651-863)||(11634190-11634402)
chr3 (443-554)||(38593063-38593177)
chr3 (469-548)||(42583183-42583263)
chr3 (479-554)||(31178143-31178217)
chr3 (450-543)||(15499166-15499258)
chr3 (477-548)||(7302201-7302272)
chr3 (481-556)||(30697480-30697554)
chr3 (481-554)||(32858941-32859012)
chr3 (475-556)||(11500211-11500292)
chr3 (406-554)||(31651268-31651415)
chr3 (502-554)||(4247228-4247280)
chr3 (504-554)||(46891497-46891547)
chr3 (505-554)||(13638537-13638586)
chr3 (399-444)||(30132052-30132097)
chr3 (398-438)||(3537433-3537473)
chr3 (561-609)||(11634076-11634124)
chr3 (449-489)||(38593238-38593278)
chr3 (502-554)||(42134608-42134660)
chr3 (399-446)||(2420534-2420581)
chr3 (485-548)||(23568180-23568242)
chr3 (503-554)||(27681914-27681965)
chr3 (400-439)||(38456485-38456524)
chr3 (502-548)||(29623353-29623399)
chr3 (504-554)||(51686617-51686667)
chr3 (504-554)||(54748422-54748472)
chr3 (481-554)||(1132833-1132905)
chr3 (399-444)||(2927730-2927775)
chr3 (407-448)||(18257835-18257876)
chr3 (481-554)||(40674218-40674290)
chr3 (402-439)||(47789618-47789655)
chr3 (418-554)||(54089288-54089425)
[»] scaffold1562 (1 HSPs)
scaffold1562 (399-554)||(251-406)
[»] scaffold1158 (1 HSPs)
scaffold1158 (399-554)||(2187-2342)
[»] chr2 (59 HSPs)
chr2 (623-793)||(21189357-21189527)
chr2 (398-554)||(40357568-40357724)
chr2 (398-554)||(18018413-18018568)
chr2 (398-554)||(36567092-36567248)
chr2 (399-554)||(25955649-25955804)
chr2 (427-554)||(7184232-7184358)
chr2 (425-554)||(8410770-8410900)
chr2 (402-554)||(31550079-31550232)
chr2 (402-554)||(14008147-14008299)
chr2 (400-554)||(8990779-8990933)
chr2 (400-554)||(10165524-10165678)
chr2 (400-554)||(38293999-38294153)
chr2 (400-554)||(18826047-18826196)
chr2 (632-800)||(2590449-2590617)
chr2 (397-554)||(13765749-13765909)
chr2 (404-554)||(4042075-4042225)
chr2 (425-554)||(38023288-38023417)
chr2 (450-554)||(32243586-32243690)
chr2 (405-554)||(8555597-8555746)
chr2 (450-554)||(726059-726162)
chr2 (405-554)||(19382988-19383138)
chr2 (404-554)||(31899176-31899326)
chr2 (410-554)||(44020450-44020590)
chr2 (402-543)||(1726022-1726159)
chr2 (403-554)||(3038765-3038917)
chr2 (633-808)||(18739113-18739289)
chr2 (452-554)||(18780495-18780596)
chr2 (632-800)||(35969278-35969442)
chr2 (621-795)||(14433589-14433764)
chr2 (400-543)||(30312242-30312386)
chr2 (397-554)||(12963787-12963941)
chr2 (449-508)||(3119349-3119408)
chr2 (435-516)||(18562037-18562117)
chr2 (454-554)||(29880875-29880974)
chr2 (649-780)||(1043114-1043244)
chr2 (455-501)||(43334924-43334970)
chr2 (449-502)||(28009723-28009776)
chr2 (504-554)||(26599175-26599225)
chr2 (449-527)||(14363375-14363454)
chr2 (481-553)||(30523389-30523460)
chr2 (481-548)||(32950993-32951060)
chr2 (502-548)||(5972314-5972360)
chr2 (504-554)||(36030904-36030954)
chr2 (399-448)||(14008491-14008540)
chr2 (400-448)||(3120013-3120061)
chr2 (481-548)||(16625703-16625768)
chr2 (479-556)||(11950108-11950183)
chr2 (400-439)||(37201787-37201826)
chr2 (520-554)||(3119788-3119822)
chr2 (504-554)||(7310153-7310203)
chr2 (402-448)||(18780254-18780300)
chr2 (502-548)||(30265277-30265323)
chr2 (398-448)||(31550412-31550462)
chr2 (400-450)||(42644860-42644910)
chr2 (399-457)||(44137285-44137343)
chr2 (505-554)||(3022806-3022855)
chr2 (401-446)||(3039113-3039158)
chr2 (402-447)||(10165287-10165332)
chr2 (485-554)||(13767529-13767597)
[»] chr5 (39 HSPs)
chr5 (402-554)||(1658288-1658439)
chr5 (399-554)||(17093008-17093163)
chr5 (399-554)||(4648798-4648957)
chr5 (399-554)||(25598584-25598739)
chr5 (398-547)||(35701521-35701670)
chr5 (406-554)||(38302182-38302328)
chr5 (406-554)||(25027033-25027181)
chr5 (623-811)||(18594752-18594940)
chr5 (401-554)||(33718292-33718445)
chr5 (453-554)||(35868941-35869041)
chr5 (399-554)||(10295594-10295752)
chr5 (450-554)||(32760867-32760972)
chr5 (399-548)||(38120010-38120158)
chr5 (406-554)||(27479989-27480142)
chr5 (400-554)||(26149714-26149865)
chr5 (398-536)||(41638498-41638630)
chr5 (431-554)||(2021091-2021214)
chr5 (623-793)||(39292061-39292224)
chr5 (449-533)||(37508224-37508308)
chr5 (621-808)||(26703007-26703195)
chr5 (621-808)||(26972740-26972928)
chr5 (398-554)||(9684605-9684761)
chr5 (504-554)||(41695088-41695138)
chr5 (502-554)||(13293902-13293954)
chr5 (399-554)||(19389648-19389798)
chr5 (465-555)||(27350888-27350977)
chr5 (481-554)||(39011942-39012013)
chr5 (466-527)||(7398664-7398724)
chr5 (505-554)||(28154801-28154850)
chr5 (504-548)||(6044650-6044694)
chr5 (484-556)||(6373247-6373319)
chr5 (508-554)||(6491295-6491341)
chr5 (481-543)||(17668032-17668093)
chr5 (402-448)||(35700932-35700978)
chr5 (399-444)||(1935231-1935276)
chr5 (481-554)||(15399926-15399998)
chr5 (441-553)||(28523730-28523842)
chr5 (400-449)||(32824533-32824582)
chr5 (481-554)||(35042315-35042387)
[»] chr4 (61 HSPs)
chr4 (399-553)||(20534039-20534193)
chr4 (400-554)||(41844546-41844700)
chr4 (400-554)||(38366138-38366291)
chr4 (402-554)||(32648822-32648974)
chr4 (398-554)||(17873307-17873463)
chr4 (399-554)||(24280022-24280177)
chr4 (402-554)||(32060757-32060909)
chr4 (399-554)||(3126827-3126982)
chr4 (400-554)||(24291496-24291651)
chr4 (402-554)||(36151189-36151340)
chr4 (406-554)||(17622295-17622442)
chr4 (398-554)||(904308-904470)
chr4 (451-554)||(38317096-38317198)
chr4 (632-823)||(6667720-6667911)
chr4 (406-556)||(16535801-16535950)
chr4 (400-548)||(32948342-32948491)
chr4 (406-554)||(7182009-7182161)
chr4 (402-554)||(37756537-37756693)
chr4 (402-554)||(41363630-41363782)
chr4 (449-554)||(49404489-49404593)
chr4 (407-542)||(13270106-13270241)
chr4 (455-554)||(47669921-47670019)
chr4 (400-554)||(31530130-31530288)
chr4 (623-802)||(13010525-13010703)
chr4 (406-528)||(21295940-21296062)
chr4 (475-554)||(23708247-23708325)
chr4 (471-554)||(48830702-48830784)
chr4 (405-531)||(50642953-50643083)
chr4 (449-554)||(22558888-22558991)
chr4 (400-554)||(52594437-52594596)
chr4 (443-553)||(21730185-21730296)
chr4 (632-785)||(6671392-6671537)
chr4 (612-689)||(20058084-20058161)
chr4 (621-730)||(44643471-44643579)
chr4 (621-728)||(895463-895570)
chr4 (561-609)||(44643612-44643660)
chr4 (449-542)||(24662613-24662705)
chr4 (406-490)||(54806626-54806711)
chr4 (398-450)||(22845046-22845098)
chr4 (504-548)||(38957465-38957509)
chr4 (431-554)||(31340878-31341001)
chr4 (486-553)||(52671200-52671267)
chr4 (487-554)||(53013698-53013764)
chr4 (398-448)||(7182354-7182404)
chr4 (504-554)||(48417531-48417581)
chr4 (504-554)||(49936613-49936663)
chr4 (504-554)||(51431055-51431105)
chr4 (481-550)||(8828108-8828176)
chr4 (441-557)||(15451194-15451310)
chr4 (481-554)||(40422970-40423043)
chr4 (481-554)||(46669842-46669915)
chr4 (399-448)||(54806344-54806393)
chr4 (515-556)||(54806580-54806621)
chr4 (443-527)||(50640256-50640339)
chr4 (475-554)||(4441914-4441993)
chr4 (481-552)||(9021047-9021117)
chr4 (749-808)||(20058180-20058239)
chr4 (399-450)||(21357977-21358028)
chr4 (401-448)||(31340658-31340705)
chr4 (481-548)||(46176835-46176901)
chr4 (481-554)||(27485160-27485233)
[»] scaffold0636 (1 HSPs)
scaffold0636 (402-554)||(8502-8654)
[»] scaffold0717 (1 HSPs)
scaffold0717 (399-554)||(1689-1845)
[»] chr8 (49 HSPs)
chr8 (632-808)||(1788900-1789077)
chr8 (402-554)||(34148398-34148549)
chr8 (402-554)||(36906298-36906452)
chr8 (402-554)||(37659351-37659501)
chr8 (402-554)||(33230864-33231017)
chr8 (406-554)||(4734318-4734466)
chr8 (402-554)||(36102708-36102860)
chr8 (400-554)||(1941866-1942023)
chr8 (623-831)||(17028270-17028480)
chr8 (623-831)||(17558706-17558916)
chr8 (400-554)||(25033491-25033645)
chr8 (399-554)||(13864907-13865062)
chr8 (410-554)||(3404399-3404544)
chr8 (606-799)||(39655676-39655869)
chr8 (406-554)||(34349826-34349974)
chr8 (418-554)||(34272626-34272762)
chr8 (623-858)||(38678575-38678809)
chr8 (458-554)||(7296-7392)
chr8 (449-554)||(2474633-2474737)
chr8 (683-858)||(38676196-38676373)
chr8 (632-747)||(21185322-21185437)
chr8 (663-808)||(21347052-21347197)
chr8 (556-609)||(39655601-39655654)
chr8 (481-546)||(15108162-15108226)
chr8 (448-542)||(6839664-6839756)
chr8 (559-614)||(31183851-31183906)
chr8 (504-554)||(31297268-31297318)
chr8 (405-530)||(43732936-43733060)
chr8 (447-492)||(31297227-31297272)
chr8 (483-554)||(3394072-3394142)
chr8 (559-609)||(21347263-21347313)
chr8 (633-699)||(31183750-31183816)
chr8 (481-551)||(37388393-37388462)
chr8 (481-554)||(13258597-13258669)
chr8 (504-548)||(11876934-11876978)
chr8 (504-548)||(11891941-11891985)
chr8 (502-554)||(13537453-13537505)
chr8 (502-554)||(13627001-13627053)
chr8 (481-553)||(27085460-27085532)
chr8 (502-554)||(40984992-40985044)
chr8 (507-554)||(29612102-29612149)
chr8 (503-554)||(35353938-35353989)
chr8 (507-554)||(39779904-39779951)
chr8 (402-448)||(3404736-3404782)
chr8 (481-543)||(5941185-5941247)
chr8 (504-554)||(10605077-10605127)
chr8 (623-669)||(38676893-38676939)
chr8 (399-448)||(34272383-34272432)
chr8 (505-554)||(38404452-38404501)
[»] scaffold0952 (1 HSPs)
scaffold0952 (399-554)||(3484-3640)
[»] scaffold0059 (2 HSPs)
scaffold0059 (431-531)||(67901-68000)
scaffold0059 (431-531)||(76006-76105)
[»] scaffold0014 (1 HSPs)
scaffold0014 (632-808)||(82561-82738)
[»] scaffold0013 (1 HSPs)
scaffold0013 (443-531)||(107669-107756)
[»] scaffold0078 (1 HSPs)
scaffold0078 (452-541)||(4401-4489)
[»] scaffold0623 (1 HSPs)
scaffold0623 (451-501)||(611-661)
[»] scaffold0459 (1 HSPs)
scaffold0459 (451-501)||(10248-10298)
[»] scaffold0076 (1 HSPs)
scaffold0076 (623-728)||(6752-6857)
[»] scaffold1763 (1 HSPs)
scaffold1763 (481-554)||(502-574)
[»] scaffold0927 (1 HSPs)
scaffold0927 (504-548)||(2830-2874)
[»] scaffold0245 (1 HSPs)
scaffold0245 (502-554)||(4257-4309)
[»] scaffold0229 (1 HSPs)
scaffold0229 (502-554)||(4588-4640)
[»] scaffold0007 (1 HSPs)
scaffold0007 (502-543)||(68618-68659)


Alignment Details
Target: scaffold0028 (Bit Score: 113; Significance: 1e-56; HSPs: 3)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 113; E-Value: 1e-56
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 35270 - 35425
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  35270 cttaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 35369  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  35370 aac-agttttttagagaatgataaactaatacttatgattaatatacttttaatttt 35425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 621 - 727
Target Start/End: Complemental strand, 127827 - 127721
Alignment:
Q  621 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 720  Q
    |||||| ||| ||||||||||||||||||||||| |||||| |||||||| || |||  | |||||||| ||||| |||| ||||||  ||||| | |||    
T  127827 tgttatctaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcagaaacgcatatcctcccatgatacaacagttcttccctgatat 127728  T
Q  721 gaatcat 727  Q
    |||||||    
T  127727 gaatcat 127721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 633 - 707
Target Start/End: Complemental strand, 110236 - 110162
Alignment:
Q  633 tgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagt 707  Q
    |||||||||||||||||||||| |||||| |||||||| || |||| | |||||||| ||||| |||| ||||||    
T  110236 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataaacgcatatcctcccaagatacaacagt 110162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 112; Significance: 4e-56; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 112; E-Value: 4e-56
Query Start/End: Original strand, 400 - 554
Target Start/End: Original strand, 34651869 - 34652023
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttg-gaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||||||||||||||| |||||||||||| ||||||||  | |||| | ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34651869 ttaggctttgtttgggagtttggaggggaagggaggggatggctttgaggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 34651968  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34651969 ac-aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 34652023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 38236055 - 38235905
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 501  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||     
T  38236055 aggctttgtttgggagtttggaggggaagggaggggagagttttgg-ggctggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac- 38235958  T
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |  |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38235957 agctttttagagaatgataaactaatacttatgattaatatacttttaatttt 38235905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 7666982 - 7667135
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 499  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  7666982 aggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 7667081  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     || ||||||||||||||||||||||||||||||||||||||||| ||| |||||    
T  7667082 taa-ttttttagagaatgataaactaatacttatgattaatatacatttaatttt 7667135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 28437359 - 28437512
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 499  Q
    |||||||||||| || |||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||| |||||||||||||||||||    
T  28437359 aggctttgtttgagagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 28437458  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  28437459 caa-ttttttagagaatgataaactaatatttatgattaatatacttttaatttt 28437512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 41002067 - 41002221
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    |||||| ||||||||||| ||||| |||||| ||| |||||  |||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  41002067 cttaggttttgtttgggagtttggtggggaagggaagggaggattttgggggttggaaatatatagaataatagacaaaaaattcacattttttgaaaga 41002166  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    || | ||||||||| |||||||||||||||||||||||||||||| |||| |||||    
T  41002167 ac-agttttttagataatgataaactaatacttatgattaatatatttttaatttt 41002221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 400 - 554
Target Start/End: Original strand, 33113459 - 33113609
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaaga 498  Q
    ||||||||||||||||| |||||||||||| ||| |||     ||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  33113459 ttaggctttgtttgggagtttggaggggaagggaagggc----tttgggggttggaaatatatagaaaaatcgacaaaaaaattcacattttttgaaaga 33113554  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||| ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  33113555 acaa-tttttcagagaatgataaactaatacttatgattaatatacttttaatttt 33113609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 43189120 - 43188968
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| |||||| ||||| |||| |||| | ||||| || ||||||||||||||||||||| |||||||| |||||||||||||||||||    
T  43189120 aggctttgtttgggagtttggatgggaagggagaggagggctttggggggttggaaatatatagaaaaatgaacaaaaaaatcacattttttgaaagaac 43189021  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  43189020 -agttttttagaaaatgataaactaatacttatgattaatatacttttaatttt 43188968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 404 - 554
Target Start/End: Original strand, 47275821 - 47275972
Alignment:
Q  404 gctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaaca 501  Q
    ||||||||||||| |||||||||||| ||| | ||| | ||||| || ||| ||||||||||||||||| |||||||| |||||||||||||||||||||    
T  47275821 gctttgtttgggagtttggaggggaagggaagtgagggctttggggggttgaaaatatatagaaaaatgtacaaaaaaattcacattttttgaaagaaca 47275920  T
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
      ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47275921 g-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 47275972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 418 - 554
Target Start/End: Original strand, 5967887 - 5968023
Alignment:
Q  418 tttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaattttttagagaat 516  Q
    ||||||| |||| ||||||||| | ||||| ||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||  |||||||||||||    
T  5967887 tttggagaggaagggaggggagggatttgggggttggaaatatataaaaaaatggataaaaaaattcacattttttaaaagaacag-ttttttagagaat 5967985  T
Q  517 gataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||||||||||| |||||    
T  5967986 gataaactaatacttatgattaatatacttttaatttt 5968023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 399 - 543
Target Start/End: Original strand, 23620610 - 23620753
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    |||||||||||||||||| || |||||| || |||  |||| ||||| | ||||||| |||||||||||||| ||||||||||||||||||||  |||||    
T  23620610 cttaggctttgtttgggagttaggagggtaagggattggagagttttaggggttggatatatatagaaaaattgacaaaaaattcacatttttctaaaga 23620709  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatata 543  Q
    || | ||||||||||||||||||||||||||||||||||||||||    
T  23620710 ac-agttttttagagaatgataaactaatacttatgattaatata 23620753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 405 - 556
Target Start/End: Complemental strand, 36747560 - 36747405
Alignment:
Q  405 ctttgtttgggaatttggaggggaaaggaggggagtgttttg-gaggttggaaatatatagaaaaa--tggacaaaaaattcacattttttgaaagaaca 501  Q
    ||||||||| || |||||||||||| |||  |||| |||||| | ||||||||||||||| |||||  ||||||||||||||||||||||||||||||||    
T  36747560 ctttgtttgagagtttggaggggaagggaaaggagggttttgaggggttggaaatatataaaaaaaaatggacaaaaaattcacattttttgaaagaaca 36747461  T
Q  502 aatttttt-agagaatgataaactaatacttatgattaatatactttttattttta 556  Q
      |||||| ||||||||| ||||||||||||||||||||||||||||||| |||||    
T  36747460 gttttttttagagaatgaaaaactaatacttatgattaatatactttttaatttta 36747405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 451 - 554
Target Start/End: Original strand, 42620220 - 42620322
Alignment:
Q  451 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttttta 550  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||  ||||||||||||||||||||||||||||||||||||||||||||| |    
T  42620220 ttggaaatatatagaaaaatggacaaaaaattcacattttttaaaataacag-ttttttagagaatgataaactaatacttatgattaatatacttttaa 42620318  T
Q  551 tttt 554  Q
    ||||    
T  42620319 tttt 42620322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 632 - 808
Target Start/End: Complemental strand, 11674117 - 11673941
Alignment:
Q  632 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 731  Q
    |||||| |||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||||||| ||||||  || |||||||||||||||||      
T  11674117 ctgaggtgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttgtt-cccgttatgaatcataatc 11674019  T
Q  732 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaa-ctcagtattttgtatgaga 808  Q
    | |||| |||||||| |||||||| |||||||||||| |  ||||||||||||||||| |||| ||||||| ||||||    
T  11674018 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaacctcaatattttggatgaga 11673941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 418 - 554
Target Start/End: Complemental strand, 19644542 - 19644403
Alignment:
Q  418 tttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaa--aaaattcacattttttgaaagaacaaattttttagaga 514  Q
    |||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||||  ||||||||||||||||||||||||   |||||||||||    
T  19644542 tttggaggggaaaggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaaaattcacattttttgaaagaac-cgttttttagaga 19644444  T
Q  515 atgataaactaatacttatgattaat-atactttttatttt 554  Q
    || ||||| ||||||||||||||||| |||||||| |||||    
T  19644443 attataaattaatacttatgattaataatacttttaatttt 19644403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 447 - 554
Target Start/End: Complemental strand, 44720298 - 44720192
Alignment:
Q  447 gaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactt 546  Q
    ||||||| |||||||||||||||||||||||| ||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||| |||||||    
T  44720298 gaggttgaaaatatatagaaaaatggacaaaatattcacattttttgaaagaac-agttttgtagagaatgataaactaatacttatgattagtatactt 44720200  T
Q  547 tttatttt 554  Q
    || |||||    
T  44720199 ttaatttt 44720192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 402 - 544
Target Start/End: Original strand, 3658329 - 3658471
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 501  Q
    ||||||||||||||| |||||||||||| | ||| ||| | ||||| ||||  |||||||||||||||||||||||||||||||||||||||||| || |    
T  3658329 aggctttgtttgggagtttggaggggaaggaaggagagggctttgggggttaaaaatatatagaaaaatggacaaaaaattcacattttttgaaaaaata 3658428  T
Q  502 aattttttagagaatgataaactaatacttatgattaatatac 544  Q
      ||||||| | ||| ||||| |||||||||||||||||||||    
T  3658429 gtttttttacaaaataataaagtaatacttatgattaatatac 3658471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 449 - 554
Target Start/End: Original strand, 33810078 - 33810182
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||| ||||| ||||||||||||| |||||||||| |||||||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||    
T  33810078 ggttgaaaatacatagaaaaatggataaaaaattcatattttttgaaagaataa-ttttttagagaatgataaactaatatttatgattaatatactttt 33810176  T
Q  549 tatttt 554  Q
     |||||    
T  33810177 aatttt 33810182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 449 - 554
Target Start/End: Original strand, 43665035 - 43665139
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||| ||||||||||||||||||||||||||||||  |||||||||||||| | |||||||||||||||||||||| ||||||||||||||||| ||||    
T  43665035 ggttgaaaatatatagaaaaatggacaaaaaattcaatttttttgaaagaac-atttttttagagaatgataaactactacttatgattaatatattttt 43665133  T
Q  549 tatttt 554  Q
     |||||    
T  43665134 aatttt 43665139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 449 - 554
Target Start/End: Original strand, 33406497 - 33406602
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttt 547  Q
    ||||| ||||||||||||||||||| |||||| |||||||||||| |||||| || ||||||||||||||||||||||| ||||||||||||||||||||    
T  33406497 ggttgaaaatatatagaaaaatggataaaaaaattcacattttttaaaagaataa-ttttttagagaatgataaactaacacttatgattaatatacttt 33406595  T
Q  548 ttatttt 554  Q
    | |||||    
T  33406596 taatttt 33406602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 63; E-Value: 7e-27
Query Start/End: Original strand, 621 - 767
Target Start/End: Original strand, 39426441 - 39426587
Alignment:
Q  621 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 720  Q
    ||||| |||||||||||||||| ||||||||||| |||||| |||||||| |  |||| |||| ||||| ||||| |||| ||||||  ||||| |||||    
T  39426441 tgttaagtaatctgaggcgtgatatagtcactgtccttgaggattttatccgtctcataagcgaatatcctcccaagataaaacagttcttccctgttat 39426540  T
Q  721 gaatcataactgaaggttacagaacagctcaaattaatctcaaagat 767  Q
    |||||||||| | |||| |||||||| |||||||| ||| |||||||    
T  39426541 gaatcataaccggaggtgacagaacaactcaaatttatcacaaagat 39426587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 449 - 554
Target Start/End: Complemental strand, 42220255 - 42220151
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    |||||||||||||||||||||| |  ||||||||   ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||| ||||    
T  42220255 ggttggaaatatatagaaaaataggaaaaaaatttctattttttgaaagaacaa-ttttttagataatgataaactaatacttatgattaatatattttt 42220157  T
Q  549 tatttt 554  Q
     |||||    
T  42220156 aatttt 42220151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 546
Target Start/End: Original strand, 39410244 - 39410337
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactt 546  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||| ||||||||   |||| |||||||||||||||||    
T  39410244 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-ggttttttagaaaatgataa---aataattatgattaatatactt 39410337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 431 - 554
Target Start/End: Complemental strand, 46449410 - 46449283
Alignment:
Q  431 ggaggggagtgttttggaggttggaaatatatagaaaaatggac----aaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaa 526  Q
    ||||||||| || | |||||||| |||||| ||||||||| ||     |||||||||||||||||||||||| ||  ||||||||||||||||||| |||    
T  46449410 ggaggggagggtgtcggaggttgaaaatatttagaaaaattgaagaaaaaaaaattcacattttttgaaagatcagtttttttagagaatgataaattaa 46449311  T
Q  527 tacttatgattaatatactttttatttt 554  Q
    ||||||| |||||||||||||| |||||    
T  46449310 tacttataattaatatacttttaatttt 46449283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 466 - 554
Target Start/End: Original strand, 43778457 - 43778545
Alignment:
Q  466 aaaatggacaaaaaattcacatttttt-gaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||||||||| |||||||||  |||||| |||||||||||||||||| ||||||||||||||||||| |||||    
T  43778457 aaaatggacaaaaaattcacatttttttgaaagaacagttttttt-gagaatgataaactaatatttatgattaatatacttttaatttt 43778545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 607 - 793
Target Start/End: Original strand, 3850517 - 3850702
Alignment:
Q  607 aaaacaacacactatgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataac-a 705  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||| |||||  |||||||  || |||| |||||||||| ||| | |||| ||| |    
T  3850517 aaaacaacacact--gttatgtaatctgaggcgtgacatagtcactgtccttgatgattttatacgcctcataagcgcatatcctcctatgatacaacga 3850614  T
Q  706 gtcattccccgttatgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactca 793  Q
    ||  |||| || ||||||||||| |   |||| | |||||| |||||||| ||||||||||||||  || || ||| |||||||||||    
T  3850615 gttcttcctcggtatgaatcatacccagaggtgatagaacaactcaaatttatctcaaagataacatgatatttaatccagaaactca 3850702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 627 - 746
Target Start/End: Original strand, 31206622 - 31206741
Alignment:
Q  627 gtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatca 726  Q
    |||| |||||||||||||||||||||||  ||||| ||||||||  | |||| |||||||||| |  ||||||| ||||||  |||||||||||||||||    
T  31206622 gtaacctgaggcgtgacatagtcactgtctttgaggattttatccacctcataagcgcatatcctggcaggatacaacagttcttccccgttatgaatca 31206721  T
Q  727 taactgaaggttacagaaca 746  Q
    |||||| |||| ||||||||    
T  31206722 taactggaggtgacagaaca 31206741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 9e-20
Query Start/End: Original strand, 632 - 746
Target Start/End: Original strand, 31210076 - 31210190
Alignment:
Q  632 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 731  Q
    ||||||||||||||||||||||| |||||| |||||||| || |||| || ||||||| |||| || || ||||||  ||||||||||||||||||||      
T  31210076 ctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagtgcatatcctcccggggtacaacagttcttccccgttatgaatcataatc 31210175  T
Q  732 gaaggttacagaaca 746  Q
    | |||| ||||||||    
T  31210176 ggaggtgacagaaca 31210190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 452 - 541
Target Start/End: Complemental strand, 16568710 - 16568622
Alignment:
Q  452 tggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaata 541  Q
    ||||||||||||||||||| || |||  |||| |||| ||||||||||| | ||||| |||||||||||||||||| |||||||||||||    
T  16568710 tggaaatatatagaaaaatagaaaaatcattcgcattctttgaaagaactacttttt-agagaatgataaactaatgcttatgattaata 16568622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 452 - 541
Target Start/End: Original strand, 16596952 - 16597040
Alignment:
Q  452 tggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaata 541  Q
    ||||||||||||||||||| || |||  |||| |||| ||||||||||| | |||| ||||||||||||||||||| |||||||||||||    
T  16596952 tggaaatatatagaaaaatagaaaaatcattcgcattctttgaaagaactactttt-tagagaatgataaactaatgcttatgattaata 16597040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 623 - 700
Target Start/End: Original strand, 22301143 - 22301220
Alignment:
Q  623 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggata 700  Q
    |||||||| ||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| ||||| ||||    
T  22301143 ttatgtaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaagata 22301220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 455 - 553
Target Start/End: Original strand, 12863525 - 12863622
Alignment:
Q  455 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 553  Q
    |||||| |||||||||||| ||| | ||||||||||||||||| || ||||||| ||| ||||||||| |||| ||||| ||||||||| |||| ||||    
T  12863525 aaatatgtagaaaaatggagaaatatttcacattttttgaaag-accaatttttcagataatgataaattaatgcttataattaatatatttttaattt 12863622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 4787900 - 4787973
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||  || ||||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  4787900 ttcacattttttgaaagagtaatttttttagagagtgataaattaatgcttatgattaatatatttttaatttt 4787973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 455 - 554
Target Start/End: Complemental strand, 18789106 - 18789008
Alignment:
Q  455 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||| | |||   || | ||||||||||||||||| |||||||||||| ||||||||||| ||||||||| || || |||| |||||    
T  18789106 aaatatatagaaaaatgaaaaaatcttttatattttttgaaagaacaa-ttttttagagaaagataaactaattcttatgattgatttatttttaatttt 18789008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 481 - 540
Target Start/End: Original strand, 46611781 - 46611839
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaat 540  Q
    ||||||||||||||||||  || ||||||||||| |||||||||||||||||||||||||    
T  46611781 ttcacattttttgaaagat-aatttttttagagagtgataaactaatacttatgattaat 46611839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 402 - 543
Target Start/End: Original strand, 23465818 - 23465959
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| |||||||||||  ||| ||||    |||| ||| |||||||||||  | |||||||  |||   |||||||||||| ||||||     
T  23465818 aggctttgtttgggagtttggaggggaggggaagggaagactttgaagggttggaaatataggggaaaatggtaaaatctttcacattttttaaaagaat 23465917  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatata 543  Q
    |  ||||||||||||||||||| |||| |||||||||||||||    
T  23465918 ag-ttttttagagaatgataaattaattcttatgattaatata 23465959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 400 - 548
Target Start/End: Original strand, 42112774 - 42112923
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt-ggaggttggaaatatatagaaaaatggacaaaaaattcacattt-tttgaaag 497  Q
    ||||||||||||||||| |||||||||||  ||| || || ||||| || ||| |||| |||| ||| ||||||| |||   ||||||||| ||||||||    
T  42112774 ttaggctttgtttgggagtttggaggggaggggaaggaagggttttagggggtgggaagtatagagagaaatggagaaatctttcacatttctttgaaag 42112873  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    |     |||||||||||||||||||||||| ||||||||| ||||| ||||    
T  42112874 agtgt-ttttttagagaatgataaactaatgcttatgattcatatattttt 42112923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 36845339 - 36845411
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||  ||| ||||||||||||| |||| ||||||||||||||| |||| |||| |||||    
T  36845339 ttcacattttttgaaagag-aaactttttagagaatgttaaattaatacttatgattactatatttttaatttt 36845411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 3658724 - 3658674
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    ||||||||||||||||||| |||||||||||  ||||||||| ||||||||    
T  3658724 acttaggctttgtttgggagtttggaggggaggggaggggagggttttgga 3658674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 22556624 - 22556674
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||| |||||||||||| ||||||||||||||| |||| |||||    
T  22556624 ttttttagagagtgataaactaatgcttatgattaatatatttttaatttt 22556674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 7667377 - 7667328
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    |||||||||||||||||| |||||||||||  ||||||||| ||||||||    
T  7667377 cttaggctttgtttgggagtttggaggggaggggaggggagggttttgga 7667328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 502 - 543
Target Start/End: Complemental strand, 48935135 - 48935094
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatata 543  Q
    ||||||||||||||||||||| |||| |||||||||||||||    
T  48935135 aattttttagagaatgataaattaatgcttatgattaatata 48935094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 710 - 806
Target Start/End: Original strand, 5434941 - 5435037
Alignment:
Q  710 ttccccgttatgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatga 806  Q
    |||||||||| ||||||||| |  || | |||||||| || ||||| |||||||| ||| | | |||||||||||| ||||||| ||||||| ||||    
T  5434941 ttccccgttaagaatcataaatagagatgacagaacaactaaaatttatctcaaaaatatcagaagatgtaacccataaactcaatattttggatga 5435037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 451 - 543
Target Start/End: Complemental strand, 14676443 - 14676352
Alignment:
Q  451 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 543  Q
    |||||||||||  | ||||||| ||||   ||||||||||||||||| |  |||||||||| |||||||||| |||| |||||| ||||||||    
T  14676443 ttggaaatataggggaaaatggtcaaatctttcacattttttgaaag-agtaattttttagggaatgataaattaatgcttatggttaatata 14676352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 448
Target Start/End: Original strand, 42854118 - 42854166
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    |||||||||||||| ||||||||||||||| ||||||||| | ||||||    
T  42854118 ttaggctttgtttgtgaatttggaggggaagggaggggagggctttgga 42854166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 400 - 450
Target Start/End: Complemental strand, 20513574 - 20513524
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg 450  Q
    ||||||||||||||||  |||| ||||||| ||||||||| ||||||||||    
T  20513574 ttaggctttgtttgggtgtttgtaggggaagggaggggagggttttggagg 20513524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 454 - 528
Target Start/End: Complemental strand, 23552387 - 23552313
Alignment:
Q  454 gaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaata 528  Q
    |||||||| |||||||| || |||   ||||||||||||||||||  |  ||||| |||||||||||||||||||    
T  23552387 gaaatatagagaaaaattgagaaatttttcacattttttgaaagagtatttttttcagagaatgataaactaata 23552313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 24923314 - 24923364
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  24923314 ttttttagagaatgataaattaatgattatgattaatatatttttaatttt 24923364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 41471599 - 41471549
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||| ||| ||| ||||||| |||| |||||    
T  41471599 ttttttagagaatgataaactaatgcttttgagtaatatatttttaatttt 41471549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 484 - 554
Target Start/End: Original strand, 42266908 - 42266977
Alignment:
Q  484 acattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||| || || ||||||||||||||||||| |||| |||||| ||| |||| |||| |||||    
T  42266908 acattttttgaaaaaataa-ttttttagagaatgataaattaatgcttatgtttactatatttttaatttt 42266977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 481 - 543
Target Start/End: Complemental strand, 45510525 - 45510464
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 543  Q
    |||||||||| |||||||  || ||||||||||||||||||| ||||  ||||||||||||||    
T  45510525 ttcacattttgtgaaagagtaa-ttttttagagaatgataaattaatgtttatgattaatata 45510464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 453 - 498
Target Start/End: Complemental strand, 3591873 - 3591828
Alignment:
Q  453 ggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||||||||||||||||||| |||   ||||||||||||||||||    
T  3591873 ggaaatatatagaaaaatggagaaatctttcacattttttgaaaga 3591828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 504 - 541
Target Start/End: Complemental strand, 38138092 - 38138055
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaata 541  Q
    ||||||||||||||||||| |||| |||||||||||||    
T  38138092 ttttttagagaatgataaattaatgcttatgattaata 38138055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 439
Target Start/End: Complemental strand, 44690126 - 44690089
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggag 439  Q
    ||||| |||||||||||||||||||||| |||||||||    
T  44690126 aggctctgtttgggaatttggaggggaagggaggggag 44690089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 556
Target Start/End: Complemental strand, 46509454 - 46509374
Alignment:
Q  475 aaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattttta 556  Q
    |||||||||||||||||| | |||  || | ||||||||||||||||| ||||  ||||| |||||||| |||||| |||||    
T  46509454 aaaaaattcacatttttttagagagtaa-tgttttagagaatgataaattaatgtttatggttaatatattttttaatttta 46509374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 1e-55; HSPs: 75)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 1e-55
Query Start/End: Original strand, 399 - 556
Target Start/End: Complemental strand, 15464077 - 15463920
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||||| |||| ||||||| ||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||    
T  15464077 cttaggctttgtttgggagtttgaaggggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 15463978  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttattttta 556  Q
    |||   ||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15463977 aac-gtttttttagagaatgataaactaatacttatgattaatatacttttaattttta 15463920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 403 - 554
Target Start/End: Complemental strand, 13255605 - 13255455
Alignment:
Q  403 ggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaa 502  Q
    ||||||||| |||| |||||||| ||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| |    
T  13255605 ggctttgttggggagtttggaggagaagggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaatttacattttttgaaagaac-a 13255507  T
Q  503 attttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13255506 attttttagagaatgataaactaatacttatgattaatatacttttgatttt 13255455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 398 - 554
Target Start/End: Complemental strand, 33991809 - 33991652
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaa 495  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||| |||||||||||||||    
T  33991809 acttaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaa 33991710  T
Q  496 agaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33991709 agaacag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 33991652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 406 - 554
Target Start/End: Complemental strand, 11017860 - 11017712
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 504  Q
    |||||||||||||| | ||||||||||||||||| ||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||| | |    
T  11017860 tttgtttgggaattcgtaggggaaaggaggggagggttttggggggttggaaatatatagaaaaatagacaaaaaattcacattttttgaaagaac-agt 11017762  T
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  11017761 tttttagagaatgataaactaatacttatgattaatatacttttaatttt 11017712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 399 - 554
Target Start/End: Complemental strand, 1523861 - 1523706
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||||| |||||||||||| ||| ||||| ||||||| || |||||||||||| ||||||||||||||||||||||||||||| ||||    
T  1523861 cttaggctttgtttgggagtttggaggggaatggatgggagagttttggggggttggaaatatattgaaaaatggacaaaaaattcacatttttttaaag 1523762  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  1523761 aacaaat-ttttaaagaatgataaactaatacttatgattaatatacttttaatttt 1523706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 13061218 - 13061367
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 504  Q
    ||||||||| | |||||||||||| ||||||||| ||||||| || ||||||||||||||| |||||||||||||||||||||||||||||||||||  |    
T  13061218 tttgtttggaagtttggaggggaagggaggggagggttttggggggttggaaatatatagagaaatggacaaaaaattcacattttttgaaagaacagtt 13061317  T
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  13061318 tttttagaaaatgataaactaatacttatgattaatatacttttaatttt 13061367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 32300318 - 32300166
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttgg-aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  32300318 aggctttgtttgggagtttggaggggaagggaggggagggctttgggaggttggaaatatgtagaaaaatggacaaaaaattcacattttttaaaagaac 32300219  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  32300218 -agttttttagaaaatgataaactaatacttatgattaatatacttttaatttt 32300166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 2925755 - 2925905
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 501  Q
    ||||||||||||||| |||| ||||||| ||||||||| | |||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  2925755 aggctttgtttgggagtttgaaggggaagggaggggagagctttg-aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaaaac- 2925852  T
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  2925853 aattttttagaaaatgataaaataatacttatgattaatatacttttaatttt 2925905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 399 - 554
Target Start/End: Complemental strand, 50247862 - 50247707
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttgga-ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||| ||||||| |||||||||||| ||||||||| |||||||  ||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  50247862 cttaggctttctttgggagtttggaggggaagggaggggagggttttgggtggttggaaatatatagaaaaatggacaaataattcacattttttaaaag 50247763  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    || |  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  50247762 aatag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 50247707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 1688035 - 1688187
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    |||| |||||||||| |||||||||||| ||||||||| | ||||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1688035 aggcgttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatgaacaaaaaattcacattttttgaaagaac 1688134  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     | | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1688135 -agtcttttagagaatgataaactaatacttatgattaatatacttttaatttt 1688187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 401 - 554
Target Start/End: Original strand, 42161871 - 42162023
Alignment:
Q  401 taggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    |||||||||||||||| ||||||||||||  |||||||| | ||||| ||||||||||||||| |||||| ||||| |||||||||||||||||||||||    
T  42161871 taggctttgtttgggagtttggaggggaagagaggggagggctttgggggttggaaatatataaaaaaatagacaataaattcacattttttgaaagaac 42161970  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     | ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  42161971 -agttttttagagaatgataaactaatatttatgattaatatacttttaatttt 42162023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 896312 - 896465
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    |||||||||||||||||| |||||||| ||| ||||||||| | ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  896312 cttaggctttgtttgggagtttggaggagaagggaggggagggctttgggggttggaaatatatagaaaaatggac-aaaaattcacattttttgaaaga 896410  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| | |||||| |||||| ||||||||||||||| |||||||||||||| |||||    
T  896411 acaga-tttttaaagaatggtaaactaatacttataattaatatacttttaatttt 896465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 400 - 554
Target Start/End: Original strand, 23871279 - 23871433
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||||||||| ||||| ||||||||| || ||||||||| | ||||| || ||||||||||||||||||||||| |||| |||||||||||||||||||    
T  23871279 ttaggctttgtctgggagtttggagggaaagggaggggagggctttggggggttggaaatatatagaaaaatggataaaatattcacattttttgaaaga 23871378  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23871379 acag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 23871433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 32299366 - 32299213
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgtttt--ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 499  Q
    ||||||||||||||| |||||||||||| ||||||||| | |||  ||||||||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  32299366 aggctttgtttgggagtttggaggggaagggaggggagggcttttgggaggttggaaatatgtagaaaaatggacaaaaaattcacattttttaaaagaa 32299267  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |   ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  32299266 c-tgttttttagaaaatgataaactaatacttatgattaatatacttttaatttt 32299213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 45565392 - 45565241
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttg-gaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    |||||||||||| || |||||||||||| ||||||||| |||||| | ||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  45565392 aggctttgtttgcgagtttggaggggaagggaggggagggttttgaggggttggaaatatatagaaaaatggacaaaaattt-acattttttgaaagaac 45565294  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |  ||||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  45565293 ag-ttttttagagaatgataaacttatacttatgattaatatacttttaatttt 45565241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 397 - 554
Target Start/End: Complemental strand, 2175604 - 2175445
Alignment:
Q  397 aacttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaa--ttcacattttttga 494  Q
    |||| ||| ||||||||||| |||||||||| | |||||| ||   ||||| |||| |||||||||||||||||||||||||||  ||||||||||||||    
T  2175604 aactaaggttttgtttgggagtttggaggggtagggagggaaggactttgggggttcgaaatatatagaaaaatggacaaaaaaaattcacattttttga 2175505  T
Q  495 aagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||| ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  2175504 aagaacaatttttttagagaatgataaactaatatttatgattaatatacttttaatttt 2175445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 404 - 554
Target Start/End: Original strand, 47905511 - 47905659
Alignment:
Q  404 gctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaa 503  Q
    |||||||||| || |||| ||||||| ||| ||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||| |     
T  47905511 gctttgtttgagagtttgaaggggaagggaagggaggggtttgg-ggttggaaatatatagaaaaatggacaaaaaattcacattttttaaaagaac-ag 47905608  T
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||||||||| ||||||||||||||||| |||||    
T  47905609 ttttttagagaatgataaactaatactaatgattaatatacttttaatttt 47905659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 622 - 807
Target Start/End: Original strand, 12141643 - 12141828
Alignment:
Q  622 gttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatg 721  Q
    |||| |||| ||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||||||| |||| | |||||||||||||    
T  12141643 gttaagtaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacaattattccccgttatg 12141742  T
Q  722 aatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgag 807  Q
    ||||||||||  |||| |||||||| |||||||| || ||||||||| | | |||| ||||||| ||||||| ||||||| |||||    
T  12141743 aatcataactagaggtgacagaacaactcaaatttatatcaaagatatcagaagatataacccaaaaactcaatattttggatgag 12141828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 623 - 811
Target Start/End: Original strand, 24981154 - 24981342
Alignment:
Q  623 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 722  Q
    |||||||| |||||||||||||||||||  || |||||| |||||||| || |||| ||| |||||| |||||||||| ||||||  |||||||||||||    
T  24981154 ttatgtaacctgaggcgtgacatagtcagcgtccttgaggattttatccgcctcataagcacatatcctcccaggatacaacagttcttccccgttatga 24981253  T
Q  723 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgagaaaa 811  Q
    |||||||| | || | | |||||| |||||||| |||||||||||| | ||||||||||| |||||||||| ||||||| |||||||||    
T  24981254 atcataaccggagatgatagaacaactcaaatttatctcaaagatatcaggagatgtaacacagaaactcaatattttggatgagaaaa 24981342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 50403007 - 50402852
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaag 497  Q
    ||||||||||||||||| ||||||||| || |||| |||| | |||||||| |||||||||||||||||||||||||||||| |||||||||||| ||||    
T  50403007 ttaggctttgtttgggagtttggagggtaagggagaggagggctttggaggattggaaatatatagaaaaatggacaaaaaaattcacatttttttaaag 50402908  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||  |||||| ||||||||||||||||||||||||||||||||| |||| |||||    
T  50402907 aacagttttttt-gagaatgataaactaatacttatgattaatatatttttaatttt 50402852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 27500247 - 27500095
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    |||| |||||||||| ||||||| |||| ||||||||| | ||||| || |||||||||||||||||||||   ||||||||||||||||||||||||||    
T  27500247 aggcattgtttgggagtttggagaggaagggaggggagggctttggggggttggaaatatatagaaaaatgacaaaaaaattcacattttttgaaagaac 27500148  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |  |||||||| |||||||||||||||||||||||||||||||||||| |||||    
T  27500147 ag-ttttttagtgaatgataaactaatacttatgattaatatacttttaatttt 27500095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 431 - 554
Target Start/End: Original strand, 39889505 - 39889628
Alignment:
Q  431 ggaggggagtgtttt-ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatac 529  Q
    ||||||||| ||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||||   ||||||||||||||||||||||||||    
T  39889505 ggaggggagggttttagggggttggaaatatatagaaaaattgacaaaaaattcacattttttgaaagaac-ggttttttagagaatgataaactaatac 39889603  T
Q  530 ttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| |||||    
T  39889604 ttatgattaatatacttttaatttt 39889628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 449 - 554
Target Start/End: Original strand, 42488492 - 42488597
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacatttttt-gaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttt 547  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  42488492 ggttggaaatatatagaaaaatggacaaaaaattcacatttttttgaaagaacag-ttttttagagaatgataaactaatacttatgattaatatacttt 42488590  T
Q  548 ttatttt 554  Q
    | |||||    
T  42488591 tgatttt 42488597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 554
Target Start/End: Complemental strand, 12294027 - 12293923
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||    
T  12294027 ggttggaaatatatagaaaaatggacaaaaatttcacattttttgaaagaac-agttttttagagaatgataaactaatacttattattaatatactttt 12293929  T
Q  549 tatttt 554  Q
     |||||    
T  12293928 aatttt 12293923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 399 - 541
Target Start/End: Complemental strand, 26940845 - 26940703
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||| | |||||||||||| | |||||||  |||||| || ||||||||||||||||||||| |||||||||||||||||| | ||||    
T  26940845 cttaggctttgtttggaagtttggaggggaaggaaggggaggattttggggggttggaaatatatagaaaaatgaacaaaaaattcacattttgtaaaag 26940746  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaata 541  Q
    ||| | ||||||||| ||||||||||||||||||||||||||||    
T  26940745 aac-agttttttagaaaatgataaactaatacttatgattaata 26940703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 396 - 554
Target Start/End: Original strand, 43571781 - 43571935
Alignment:
Q  396 caacttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttga 494  Q
    ||||||||||||||||||||| ||||||| |||| ||||||||  | ||||| || ||||||||||||| |||||||||||| |||||||||||||||||    
T  43571781 caacttaggctttgtttgggagtttggagaggaagggaggggaaggctttggggggttggaaatatatacaaaaatggacaagaaattcacattttttga 43571880  T
Q  495 aagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    || ||| | ||||||||||||||||||||||    ||||||||||||||||||| |||||    
T  43571881 aaaaac-agttttttagagaatgataaacta----ttatgattaatatacttttaatttt 43571935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 431 - 554
Target Start/End: Complemental strand, 17675428 - 17675307
Alignment:
Q  431 ggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatact 530  Q
    ||||||||| | ||||| ||||| |||||||||||||||||||||||||| ||| |||||| |||||||||| ||||||||||||||||||||||||| |    
T  17675428 ggaggggagggctttgggggttgaaaatatatagaaaaatggacaaaaaaatcatattttt-gaaagaacaa-ttttttagagaatgataaactaatatt 17675331  T
Q  531 tatgattaatatactttttatttt 554  Q
    |||||||||||||||||| |||||    
T  17675330 tatgattaatatacttttaatttt 17675307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 402 - 527
Target Start/End: Complemental strand, 38795228 - 38795103
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| |||||||||||| |||||||||   ||||| || |||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  38795228 aggctttgtttgggagtttggaggggaagggaggggagaactttggtgggttggaaatatatagaaaaattgacaaaaaaatcacattttttgaaagaac 38795129  T
Q  501 aaattttttagagaatgataaactaat 527  Q
     | ||||||||||||||||||||||||    
T  38795128 -agttttttagagaatgataaactaat 38795103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 47206238 - 47206394
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggagggg-agtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 496  Q
    |||||||| ||||||| | | |||||||||| ||||||| || | ||||| || |||||||||||||||||||| || ||||||||||||||||||||||    
T  47206238 cttaggctctgtttggcagtatggaggggaagggagggggagggctttggggggttggaaatatatagaaaaattgataaaaaattcacattttttgaaa 47206337  T
Q  497 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||| |  |||||||||||| |||||| |||||||||||||||||||||||| |||||    
T  47206338 gaac-agctttttagagaattataaacaaatacttatgattaatatacttttaatttt 47206394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 425 - 529
Target Start/End: Original strand, 8156187 - 8156291
Alignment:
Q  425 gggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggac-aaaaaattcacattttttgaaagaacaaattttttagagaatgataaac 523  Q
    ||||| ||||||||| | ||||| ||||| |||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||    
T  8156187 gggaagggaggggagggctttgggggttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaac-aattttttagagaatgataaac 8156285  T
Q  524 taatac 529  Q
    ||||||    
T  8156286 taatac 8156291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 51246398 - 51246544
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaatt 505  Q
    |||||||| || |||| ||| ||  ||||||||| | ||||| ||||||||||||||| ||||||| | |||||||| ||||||||||||||||||  ||    
T  51246398 tttgtttgagagtttgaaggagaggggaggggagggctttgg-ggttggaaatatataaaaaaatgcataaaaaatttacattttttgaaagaacag-tt 51246495  T
Q  506 ttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||||    
T  51246496 ttttagagaatgataaactaatctttatgattaatatacttttaatttt 51246544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 400 - 554
Target Start/End: Original strand, 26756972 - 26757125
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggag-gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||||||| ||||||| ||| ||||| || ||| ||||| | ||||| | ||||||||||| |||||| ||||| |||||||||||||||| | |||||    
T  26756972 ttaggctttatttgggagtttagaggg-aagggaagggagggctttggggagttggaaatatgtagaaatatggataaaaaattcacattttgtaaaaga 26757070  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| |||||| | ||||||||||||||||||||||||||||||||||||| |||||    
T  26757071 acatatttttaa-agaatgataaactaatacttatgattaatatacttttaatttt 26757125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 431 - 536
Target Start/End: Complemental strand, 7965673 - 7965569
Alignment:
Q  431 ggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacatt-ttttgaaagaacaaattttttagagaatgataaactaatac 529  Q
    |||||||| |||||||| |||||||||||||||||||||| || |||||||||||||| ||||||||||||| | |||||||||||||||||||||||||    
T  7965673 ggaggggaatgttttgg-ggttggaaatatatagaaaaatagataaaaaattcacatttttttgaaagaacaga-tttttagagaatgataaactaatac 7965576  T
Q  530 ttatgat 536  Q
    |||||||    
T  7965575 ttatgat 7965569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 656 - 793
Target Start/End: Complemental strand, 1953780 - 1953643
Alignment:
Q  656 cttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataactgaaggttacagaacagctcaaatt 755  Q
    |||||| ||||||||||| |||| |||| ||||| |||||||||| ||||||  ||||| ||||||||||||||| | |||| |||||||| ||||||||    
T  1953780 cttgaggattttatctgcctcataagcgaatatcctcccaggatacaacagttcttccctgttatgaatcataacgggaggtgacagaacaactcaaatt 1953681  T
Q  756 aatctcaaagataaccggagatgtaacccagaaactca 793  Q
     ||| |||||||  | ||||||||||||||||||||||    
T  1953680 tatcacaaagatgtcaggagatgtaacccagaaactca 1953643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 66; E-Value: 1e-28
Query Start/End: Original strand, 406 - 534
Target Start/End: Original strand, 7401388 - 7401516
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 504  Q
    ||||||||||| ||||||||||||  |||||||| | ||||| || || |||||||||||||||||||| |||||||||||||||||||||| ||| | |    
T  7401388 tttgtttgggagtttggaggggaagagaggggagggctttggggggttagaaatatatagaaaaatggataaaaaattcacattttttgaaaaaac-agt 7401486  T
Q  505 tttttagagaatgataaactaatacttatg 534  Q
    |||||||||||| |||||||||| ||||||    
T  7401487 tttttagagaataataaactaatgcttatg 7401516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 632 - 808
Target Start/End: Complemental strand, 47580513 - 47580335
Alignment:
Q  632 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcc--caggatataacagtcattccccgttatgaatcataa 729  Q
    ||||||||||||||||||| ||| |||||  ||||||||||| |||| |||| ||||| |||  ||||||| |||||   ||||||||||||||||||||    
T  47580513 ctgaggcgtgacatagtcaatgtccttgaagattttatctgcctcataagcgaatatcctccaccaggatacaacaggtcttccccgttatgaatcataa 47580414  T
Q  730 ctgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgaga 808  Q
    |  ||| | |||||| | |||||||| ||| |||||||  | ||||||||||||||||||||||  |||||| ||||||    
T  47580413 ccaaagatgacagaagaactcaaatttatcacaaagatgtcaggagatgtaacccagaaactcaacattttggatgaga 47580335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 50476791 - 50476639
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttg-gaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| |||||||||||| ||  ||||| |||||||||| || |||||||||||| ||||||| |||   |||||||||||||||||| |    
T  50476791 aggctttgtttgggagtttggaggggaagggtagggagggttttggagggtgagaaatatatagagaaatggagaaatctttcacattttttgaaagagc 50476692  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     ||||||| ||| |||||||||||||| ||||| ||| ||||| |||| |||||    
T  50476691 -aatttttaagataatgataaactaatgcttattattgatatatttttaatttt 50476639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 449 - 548
Target Start/End: Original strand, 40707068 - 40707168
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatg--ataaactaatacttatgattaatatactt 546  Q
    ||||||||||||||||||||||||| |||||||| ||||||||| ||||||| | ||||||||||||||  |||||||||||||||| ||| ||||||||    
T  40707068 ggttggaaatatatagaaaaatggataaaaaattaacattttttaaaagaac-agttttttagagaatgatataaactaatacttataattgatatactt 40707166  T
Q  547 tt 548  Q
    ||    
T  40707167 tt 40707168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 621 - 707
Target Start/End: Original strand, 9111531 - 9111617
Alignment:
Q  621 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagt 707  Q
    |||||| ||||||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||||||| ||||||    
T  9111531 tgttatataatctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcttcccaggatacaacagt 9111617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 55; E-Value: 4e-22
Query Start/End: Original strand, 400 - 524
Target Start/End: Original strand, 30538589 - 30538713
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttg-gaggttggaaatatatagaaaa-atggacaaaaaattcacattttttgaaag 497  Q
    ||||||||||||||| | |||||||||||| ||| || || |||||| | ||||||||||||||| |||| |||||||||||||||||||||||||||||    
T  30538589 ttaggctttgtttggaagtttggaggggaagggaagg-agggttttgaggggttggaaatatataaaaaaaatggacaaaaaattcacattttttgaaag 30538687  T
Q  498 aacaaattttttagagaatgataaact 524  Q
    |||   ||||||| |||||||||||||    
T  30538688 aac-cgttttttatagaatgataaact 30538713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 449 - 554
Target Start/End: Complemental strand, 17688558 - 17688450
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaact----aatacttatgattaatatac 544  Q
    ||||| ||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||||    | || |||||||||||||||    
T  17688558 ggttgaaaatatataaaaaaatggataaaaaattcacattttttgaaagaac-agttttttagagaataataaactagtaagtatttatgattaatatac 17688460  T
Q  545 tttttatttt 554  Q
    |||| |||||    
T  17688459 ttttaatttt 17688450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 431 - 554
Target Start/End: Original strand, 36668497 - 36668619
Alignment:
Q  431 ggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatact 530  Q
    ||||||||| |||||||  || | ||||||| ||| ||||||| ||||  |||||||||||||||||||| |||||| | || |||||||||||||| ||    
T  36668497 ggaggggagagttttgggagtggaaaatatacagagaaatggagaaaattttcacattttttgaaagaac-aattttattgaaaatgataaactaatgct 36668595  T
Q  531 tatgattaatatactttttatttt 554  Q
    ||||||||||||| |||| |||||    
T  36668596 tatgattaatatatttttaatttt 36668619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 448 - 554
Target Start/End: Original strand, 938112 - 938221
Alignment:
Q  448 aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaac-taatacttatg---attaatata 543  Q
    |||| |||||||||||||| |||||| |||||||||| ||||||| ||||||| |||||| ||||||||||||||| ||||| |||||   |||||||||    
T  938112 aggtgggaaatatatagaagaatggataaaaaattcatattttttaaaagaac-aattttgtagagaatgataaacttaatatttatgattattaatata 938210  T
Q  544 ctttttatttt 554  Q
    ||||| |||||    
T  938211 cttttaatttt 938221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 486 - 554
Target Start/End: Complemental strand, 14153289 - 14153222
Alignment:
Q  486 attttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||| |||| ||||||||||||||||||| ||||||||||||||||||| |||||    
T  14153289 attttttgaaagaacaaaatttt-agagaatgataaactaatatttatgattaatatacttttaatttt 14153222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 454 - 548
Target Start/End: Original strand, 9173620 - 9173713
Alignment:
Q  454 gaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    |||||||||||||||||| | |||  | | ||||||||| ||||||||||||||| ||| |||||||||||||| ||||||||||||||| ||||    
T  9173620 gaaatatatagaaaaatgaaaaaatcaatgacatttttttaaagaacaaattttt-agataatgataaactaatgcttatgattaatatattttt 9173713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 484 - 554
Target Start/End: Original strand, 30543264 - 30543333
Alignment:
Q  484 acattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||| || ||||||||||||||||||| |||||||||||||||||||| |||| |||||    
T  30543264 acattttttgaaagaataa-ttttttagagaatgataaattaatacttatgattaatatatttttaatttt 30543333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 621 - 746
Target Start/End: Original strand, 4242559 - 4242684
Alignment:
Q  621 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 720  Q
    ||||| |||| ||||| ||||||||| ||  ||| |||||| |||||||| |  |||| |||||||||| |||||||||| ||| ||  |||||||||||    
T  4242559 tgttaagtaacctgagacgtgacataatcgttgtccttgaggattttatccgactcatgagcgcatatcctcccaggatacaactgttcttccccgttat 4242658  T
Q  721 gaatcataactgaaggttacagaaca 746  Q
    |||||||||  |||||| ||||||||    
T  4242659 gaatcataatcgaaggtgacagaaca 4242684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 627 - 793
Target Start/End: Complemental strand, 51465606 - 51465452
Alignment:
Q  627 gtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatca 726  Q
    |||||||||||||||||||||||||||| ||||   ||||||||          ||||||||  | |||||||| ||||||  || ||||||||||||||    
T  51465606 gtaatctgaggcgtgacatagtcactgtccttggagattttatc----------gcgcatattcttccaggatacaacagttctttcccgttatgaatca 51465517  T
Q  727 taactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactca 793  Q
    ||   | ||||||||||||| |||||||| |||||  ||||| | ||||||||||||||||||||||    
T  51465516 tactcggaggttacagaacaactcaaatttatctc--agatatcaggagatgtaacccagaaactca 51465452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 402 - 527
Target Start/End: Complemental strand, 39509031 - 39508906
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggag-gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| |||||||||||  ||| ||||| | ||||| | || ||||||||||||||||||| | |||   ||||||||||| |||||| |    
T  39509031 aggctttgtttgggagtttggaggggaggggaagggagagctttggcgagtgggaaatatatagaaaaatgaaaaaatctttcacatttttggaaagagc 39508932  T
Q  501 aaattttttagagaatgataaactaat 527  Q
    ||| |||||||||||| ||||| ||||    
T  39508931 aaa-tttttagagaatcataaattaat 39508906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 561 - 609
Target Start/End: Complemental strand, 1953876 - 1953828
Alignment:
Q  561 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 609  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  1953876 aacttatcgaatttggttgccgacacagccccatcaaaatcttcacaaa 1953828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 452 - 543
Target Start/End: Original strand, 28773257 - 28773350
Alignment:
Q  452 tggaaatatatagaaaaatggacaaaaa--attcacattttttgaaagaacaaattttttagagaatgataaactaatactta-tgattaatata 543  Q
    |||||||||||||||||||||| |||    || ||||||||| |||||||||| ||||||||||||||||||||||||  ||| |||||||||||    
T  28773257 tggaaatatatagaaaaatggaaaaatcttatccacatttttcgaaagaacaa-ttttttagagaatgataaactaatgtttattgattaatata 28773350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 26310517 - 26310467
Alignment:
Q  559 gaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 609  Q
    |||||||||||||||||||||  |||||||||||||||||||| |||||||    
T  26310517 gaaacttatcgaatttggttgttgacacagctccatcaaaatcgtcacaaa 26310467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 4242473 - 4242526
Alignment:
Q  556 agtgaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 609  Q
    |||||||||||| ||||||||||| ||||||| |||||||||||||||| ||||    
T  4242473 agtgaaacttattgaatttggttgtcgacacaactccatcaaaatcttcgcaaa 4242526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 397 - 450
Target Start/End: Complemental strand, 9595829 - 9595776
Alignment:
Q  397 aacttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg 450  Q
    |||| ||||||||||||||| |||||||||||| ||||||||| ||||||||||    
T  9595829 aactaaggctttgtttgggagtttggaggggaagggaggggagggttttggagg 9595776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 561 - 609
Target Start/End: Original strand, 12141561 - 12141609
Alignment:
Q  561 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 609  Q
    ||||||||||||||||||| ||||||| || ||||||||||||||||||    
T  12141561 aacttatcgaatttggttgccgacacatcttcatcaaaatcttcacaaa 12141609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 26345788 - 26345736
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||| |||| ||||||||||||||| || |||||||    
T  26345788 aattttttagagaatgataaattaatgcttatgattaatatatttattatttt 26345736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 554
Target Start/End: Complemental strand, 33579519 - 33579364
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||||| |||| ||| |||||||  |||  |||||||||| |||||||||||  |  ||||||  ||    || ||| ||||||||||    
T  33579519 cttaggctttgtttgggagtttgaaggagaaaggaatggaaggttttggagggttggaaatatagggggaaatggtaaagtcttttacaatttttgaaag 33579420  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |  || ||||||||||||||||||| |||| ||||||| ||||||| |||| |||||    
T  33579419 agtaa-ttttttagagaatgataaattaatgcttatgactaatatatttttaatttt 33579364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 41432680 - 41432732
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||| ||||| |||||||||||||||||||| |||| |||||    
T  41432680 aattttttagagaataataaattaatacttatgattaatatatttttaatttt 41432732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 51465693 - 51465645
Alignment:
Q  559 gaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 609  Q
    ||||||||||||||||||||| |||||||||||||||  ||||||||||||    
T  51465693 gaaacttatcgaatttggttgccgacacagctccatc--aatcttcacaaa 51465645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 453 - 543
Target Start/End: Complemental strand, 28748401 - 28748312
Alignment:
Q  453 ggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 543  Q
    ||||||||| |||||||| || |||   |||  ||||| |||||||| || ||||| | ||||||||||||||||||||||||||||||||    
T  28748401 ggaaatatacagaaaaattgagaaatctttcgtattttatgaaagaataattttttga-agaatgataaactaatacttatgattaatata 28748312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 39179315 - 39179269
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||||    
T  39179315 aggctttgtttgggagtttggaggggaagggaggggagggttttgga 39179269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 42806331 - 42806281
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||| ||||||| |||||||||||||| ||||| ||||||||||    
T  42806331 ttttttagagagtgataaattaatacttatgattgatatattttttatttt 42806281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 505 - 551
Target Start/End: Original strand, 51303096 - 51303142
Alignment:
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttat 551  Q
    |||||||||||||||||| |||| ||||||||||||||| |||||||    
T  51303096 tttttagagaatgataaattaatgcttatgattaatatattttttat 51303142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 665 - 777
Target Start/End: Complemental strand, 39197297 - 39197184
Alignment:
Q  665 tttatctgcttcattagcgcatatcatcccaggatataaca-gtcattccccgttatgaatcataactgaaggttacagaacagctcaaattaatctcaa 763  Q
    ||||||||| |||| |||||||||| | |||||||| |||| |||  || ||  |||||||||||   |||||| |||||||| |||||||  |||||||    
T  39197297 tttatctgcctcataagcgcatatcctaccaggatacaacaagtccctctccaatatgaatcatagtcgaaggtgacagaacaactcaaatatatctcaa 39197198  T
Q  764 agataaccggagat 777  Q
    ||||||| ||||||    
T  39197197 agataacaggagat 39197184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 52073356 - 52073428
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||  || ||||||||||||||||||| |||   |||||||||||||| |||| |||||    
T  52073356 ttcacattttttgaaagagtaa-ttttttagagaatgataaattaacgtttatgattaatatatttttaatttt 52073428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 1278632 - 1278580
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||| |||||||||||| |||| ||||||||||||||| |||| |||||    
T  1278632 aattttttggagaatgataaattaatgcttatgattaatatatttttaatttt 1278580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 34918660 - 34918712
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||| || |||||| ||||||||| ||||||||||||||| ||||||||||    
T  34918660 aattttgtacagaatggtaaactaatgcttatgattaatatattttttatttt 34918712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 554
Target Start/End: Complemental strand, 36269905 - 36269854
Alignment:
Q  503 attttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||| |||| ||||||||| ||||  ||||||||||    
T  36269905 attttttagagaatgataaattaatgcttatgattgatatgttttttatttt 36269854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 514 - 556
Target Start/End: Complemental strand, 1063487 - 1063445
Alignment:
Q  514 aatgataaactaatacttatgattaatatactttttattttta 556  Q
    ||||||||||||||||||||| |||||||| |||||| |||||    
T  1063487 aatgataaactaatacttatgcttaatatattttttaatttta 1063445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 512 - 554
Target Start/End: Complemental strand, 1071125 - 1071083
Alignment:
Q  512 agaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||| |||||||||||||| |||| |||||    
T  1071125 agaatgataaactaatatttatgattaatatatttttaatttt 1071083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 4204700 - 4204750
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| |||||| |||||||| |||| |||| |||||    
T  4204700 ttttttagagaatgataaattaatacatatgattactatatttttaatttt 4204750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 508 - 554
Target Start/End: Original strand, 5883528 - 5883574
Alignment:
Q  508 ttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  5883528 ttagagagtgataaattaatacttatgattaatatatttttaatttt 5883574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 26940478 - 26940524
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    |||||||||||| || ||||||||||| |||||||||| ||||||||    
T  26940478 aggctttgtttgagagtttggaggggagaggaggggagggttttgga 26940524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 28719005 - 28718955
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    |||||| ||||||||| || ||||||||||||||||| |||| ||||||||    
T  28719005 acttagactttgtttgcgagtttggaggggaaaggagtggagggttttgga 28718955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 43530218 - 43530268
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  43530218 ttttttagagagtgataaattaatgcttatgattaatatatttttaatttt 43530268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 110; Significance: 6e-55; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 398 - 554
Target Start/End: Original strand, 29241647 - 29241803
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt-ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 496  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||| || |||||||||||| |||||||||||||||||||||||||||||||||||    
T  29241647 acttaggctttgtttgggagtttggaggggaagggaggggagggctttagggggttggaaatatgtagaaaaatggacaaaaaattcacattttttgaaa 29241746  T
Q  497 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29241747 gaacaga-tttttagagaatgataaactaatacttatgattaatatacttttaatttt 29241803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 400 - 554
Target Start/End: Original strand, 23094945 - 23095098
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 499  Q
    ||||||||||||||||| ||||||| |||| |||||||||  ||| ||   ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  23094945 ttaggctttgtttgggagtttggagtggaagggaggggaggctttggggttttggaaatatatagaaaaatggacaaaaaattcactttttttgaaagaa 23095044  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    | ||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  23095045 c-aattttttagagaatgataaaataatacttatgattaatatacttttaatttt 23095098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 5825595 - 5825443
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| |||||||||||| |||||| ||   ||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5825595 aggctttgtttgggagtttggaggggaagggagggaaggactttggggggttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 5825496  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  5825495 -agttttttagagaatgataaactaatacttatgattaatatacttttaatttt 5825443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 26574213 - 26574365
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| ||||| |||||| ||||| ||| | ||||| || |||||||||||| ||||||| |||||||||||||||||||||||||||||    
T  26574213 aggctttgtttgggagtttggtggggaagggaggagagagctttggggggttggaaatatattgaaaaatagacaaaaaattcacattttttgaaagaac 26574312  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    || ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26574313 aa-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 26574365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 406 - 554
Target Start/End: Complemental strand, 24735141 - 24734991
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaatt--cacattttttgaaagaacaa 502  Q
    ||||||||||| |||||||||||  ||||||||| ||||||| || ||||||||||||||||||||||||||||||||  |||||||||||||||||||     
T  24735141 tttgtttgggagtttggaggggaggggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattttcacattttttgaaagaacag 24735042  T
Q  503 attttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24735041 -ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 24734991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 26480953 - 26481101
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgtttt-ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 504  Q
    ||||||||||| |||||| ||||| ||||||||| | ||| || |||||||||||||||||||||| || |||||||||||||||||||||| ||||  |    
T  26480953 tttgtttgggagtttggaagggaagggaggggagggctttcgggggttggaaatatatagaaaaattgataaaaaattcacattttttgaaaaaacag-t 26481051  T
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  26481052 tttttagagaatgataaactaatacttatgattaatatacttttaatttt 26481101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 554
Target Start/End: Original strand, 31345182 - 31345341
Alignment:
Q  397 aacttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt-ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaa 495  Q
    |||| ||||||||||||||| |||||| ||||| ||||||||| ||||| || |||||||||||||||||||||||||||||||||| ||||||||||||    
T  31345182 aactaaggctttgtttgggagtttggaagggaacggaggggagggttttagggggttggaaatatatagaaaaatggacaaaaaatttacattttttgaa 31345281  T
Q  496 agaacaaattttttagagaatgataaacta-atactta-tgattaatatactttttatttt 554  Q
    |||||  |||||||||| |||||||||||| ||||||| |||||||||||||||| |||||    
T  31345282 agaac-cattttttagaaaatgataaactatatacttattgattaatatacttttaatttt 31345341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 402 - 555
Target Start/End: Original strand, 4909698 - 4909852
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttg-gaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 499  Q
    ||||||||||||||| |||||||||||| ||||| ||| | ||||| ||||  |||||||||||||||||| |||||||| |||||||||||||||||||    
T  4909698 aggctttgtttgggagtttggaggggaagggaggcgagggctttgggggtttagaaatatatagaaaaatgaacaaaaaaattcacattttttgaaagaa 4909797  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttattttt 555  Q
    ||| |||||||||||||||||||||||| ||||| ||||||||||||||| |||||    
T  4909798 caa-ttttttagagaatgataaactaatgcttataattaatatacttttttttttt 4909852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 410 - 554
Target Start/End: Complemental strand, 34914882 - 34914738
Alignment:
Q  410 tttgggaatttggaggggaaaggaggggagtgttttggaggttggaaa-tatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttt 508  Q
    ||||||| | |||||||||| ||||||||| ||||||| ||||  ||| ||||||||||||||||||||||||||| ||||||||||| ||||  |||||    
T  34914882 tttgggagtatggaggggaagggaggggagggttttgggggtttaaaaatatatagaaaaatggacaaaaaattcatattttttgaaaaaacag-ttttt 34914784  T
Q  509 tagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  34914783 tagagaatgataaactaatacttatgattaatatacttttaatttt 34914738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 632 - 790
Target Start/End: Original strand, 19697846 - 19698004
Alignment:
Q  632 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 731  Q
    ||||||||||||||||||| ||| |||||| |||||||| || |||| |||||||||| |||||||||| ||||||  ||||||||||||||||||||      
T  19697846 ctgaggcgtgacatagtcattgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataatc 19697945  T
Q  732 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaac 790  Q
    | |||| |||||||| |||||||| |||||||||||| |  ||||||||||||||||||    
T  19697946 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaac 19698004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 1029557 - 1029404
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||||||| ||||  | ||||||||||||  |||||||| | ||||| || |||||||||||||||||||| || |||||||||||||||||| |||||    
T  1029557 ttaggctttctttgaaagtttggaggggaatagaggggagggctttggggggttggaaatatatagaaaaatagataaaaaattcacatttttttaaaga 1029458  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||  | ||||||||||||||||||||||||| |||||||||||||||| |||||    
T  1029457 acaa--tatttagagaatgataaactaatacttgtgattaatatacttttaatttt 1029404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 6591754 - 6591807
Alignment:
Q  556 agtgaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 609  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  6591754 agtgaaacttatcgaatttggttgccgacacagctccatcaaaatcttcacaaa 6591807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 621 - 720
Target Start/End: Original strand, 6591839 - 6591938
Alignment:
Q  621 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 720  Q
    ||||| |||| |||||||||||| |||||||||| |||||| |||||||| || |||| |||||||||| |||||||||  ||||||  ||| |||||||    
T  6591839 tgttaagtaacctgaggcgtgacgtagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatgcaacagttcttctccgttat 6591938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 716 - 807
Target Start/End: Complemental strand, 15518073 - 15517982
Alignment:
Q  716 gttatgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgag 807  Q
    ||||| ||||||||| | |||| |||||||| ||||| || |||| |||||||   |||||||||||||||||||||| ||||||| |||||    
T  15518073 gttataaatcataaccggaggtgacagaacaactcaactttatcttaaagatatgaggagatgtaacccagaaactcaatattttgaatgag 15517982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 484 - 554
Target Start/End: Complemental strand, 16329559 - 16329490
Alignment:
Q  484 acattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||| || ||||||||||||||||||| |||| || |||||||| ||| |||| |||||    
T  16329559 acattttttgaaagaataa-ttttttagagaatgataaattaatgctaatgattaaaatatttttaatttt 16329490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 19976259 - 19976209
Alignment:
Q  559 gaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 609  Q
    |||||||||||||||| |||| ||||| | |||||||||||||||||||||    
T  19976259 gaaacttatcgaattttgttgccgacaaaactccatcaaaatcttcacaaa 19976209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 33212483 - 33212431
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||| | |||||||||||||||||||||| ||||| |||| |||||    
T  33212483 aattttttagatagtgataaactaatacttatgattcatatatttttaatttt 33212431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 446
Target Start/End: Complemental strand, 2365809 - 2365762
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttg 446  Q
    |||||||||||||||||| |||||||||||  ||||||||| ||||||    
T  2365809 cttaggctttgtttgggagtttggaggggaggggaggggagggttttg 2365762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 540
Target Start/End: Complemental strand, 5613606 - 5613552
Alignment:
Q  485 cattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaat 540  Q
    |||||||| ||||| |||||||||||||||  |||||| |||||||||||||||||    
T  5613606 cattttttaaaaga-caaattttttagagagggataaattaatacttatgattaat 5613552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 554
Target Start/End: Original strand, 8439314 - 8439365
Alignment:
Q  503 attttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  8439314 attttttagagaatgataaattaatgtttatgattaatatatttttaatttt 8439365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 26713735 - 26713781
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    |||||||||||| || |||||||||||| ||||||||| ||||||||    
T  26713735 aggctttgtttgcgagtttggaggggaagggaggggagggttttgga 26713781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 29054728 - 29054678
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| |||||  |||||||| |||| ||||||||||    
T  29054728 ttttttagagaatgataaattaatatatatgattactatattttttatttt 29054678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 110; Significance: 6e-55; HSPs: 60)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 110; E-Value: 6e-55
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 49861099 - 49860947
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  49861099 aggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatgggcaaaaaattcacattttttgaaagaac 49861000  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  49860999 -aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 49860947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 108; E-Value: 9e-54
Query Start/End: Original strand, 404 - 554
Target Start/End: Original strand, 47434114 - 47434264
Alignment:
Q  404 gctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcaca-ttttttgaaagaacaa 502  Q
    ||||||||||||| ||||||||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||      
T  47434114 gctttgtttgggagtttggaggggaagagaggggagggttttggaggttggaaatatatagaaaaatggacaaaaaattcacatttttttgaaagaac-g 47434212  T
Q  503 attttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  47434213 gttttttagagaatgataaactaatacttatgattaatatacttttaatttt 47434264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 41961795 - 41961947
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||| ||||| || ||||||||| ||||||||| ||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41961795 aggctttgtatgggagttaggaggggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 41961894  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41961895 -agttttttagagaatgataaactaatacttatgattaatatacttttaatttt 41961947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 47789261 - 47789416
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| |||||||||||     
T  47789261 cttaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcaaattttttgaaaa 47789360  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  47789361 aac-agttttttagaaaatgataaactaatacttatgattaatatacttttaatttt 47789416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 43237555 - 43237401
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||||||||||||||| |||||||||||| ||||| ||| | ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  43237555 ttaggctttgtttgggagtttggaggggaagggaggagagggatttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 43237456  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||   |||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  43237455 ac-ggttttttagagaatgataaactaatacttatgattaataaacttttaatttt 43237401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 406 - 556
Target Start/End: Original strand, 49682824 - 49682973
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaatt 505  Q
    |||||||| || |||||||||||| ||||||||| | ||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||| | ||    
T  49682824 tttgtttgtgagtttggaggggaagggaggggagggctttgggggttggaaatatatagaaaaatgaacaaaaaattcacattttttgaaaaaac-attt 49682922  T
Q  506 ttttagagaatgataaactaatacttatgattaatatactttttattttta 556  Q
    ||||||| ||||||||||||||||||||||||||||||||||| |||||||    
T  49682923 ttttagataatgataaactaatacttatgattaatatacttttaattttta 49682973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 30121340 - 30121492
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| |||||||||||  ||||||||| | ||||| || |||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  30121340 aggctttgtttgggagtttggaggggaggggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcatattttttgaaagagc 30121439  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30121440 ag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 30121492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 397 - 554
Target Start/End: Complemental strand, 38515505 - 38515348
Alignment:
Q  397 aacttaggctttgtttgggaatttggaggggaaaggaggggagtgtttt-ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaa 495  Q
    |||| ||||||||||||| |||||||||||||| ||||||||| ||||  || ||||| ||||||||||||||||| |||||||||||| ||||||| ||    
T  38515505 aactaaggctttgtttggaaatttggaggggaagggaggggagggtttcagggggttgaaaatatatagaaaaatgaacaaaaaattcatatttttttaa 38515406  T
Q  496 agaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  38515405 agaacaa-ttttttagagaataataaactaatacttatgattaatatacttttaatttt 38515348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 3042946 - 3043098
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| ||||||||||||  || ||||| | ||||| || ||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  3042946 aggctttgtttgggagtttggaggggaagagatgggagggctttggggggttggaaatatataaaaaaatggacaaaaaattcacattttttggaagaac 3043045  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3043046 ag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 3043098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 399 - 554
Target Start/End: Complemental strand, 39499464 - 39499309
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaag 497  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||||| ||||| ||||||||||||||||||| |||||| |||||||||||| ||||    
T  39499464 cttaggctttgtttgggagtttggaggggaagggaggggagggctttgg-ggttgaaaatatatagaaaaatggataaaaaaattcacattttttaaaag 39499366  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||  ||||||| ||||| ||||||||||||||||||||||||||||||| |||||    
T  39499365 aacagtttttttaaagaataataaactaatacttatgattaatatacttttaatttt 39499309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 403 - 555
Target Start/End: Complemental strand, 55445171 - 55445017
Alignment:
Q  403 ggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaac 500  Q
    |||||||||||||| |||||||||||| ||||||||| | | ||  || ||||||||||||||||||||| |||||||| ||||||||||||||| ||||    
T  55445171 ggctttgtttgggagtttggaggggaagggaggggagggctctgatgggttggaaatatatagaaaaatgaacaaaaaaattcacattttttgaatgaac 55445072  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttattttt 555  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  55445071 agtttttttagagaatgataaactaatacttatgattaatatacttttaattttt 55445017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 431 - 554
Target Start/End: Complemental strand, 23163757 - 23163634
Alignment:
Q  431 ggaggggagtgttttgg-aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatac 529  Q
    ||||||||| ||||||| |||||||||||||||||| |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||    
T  23163757 ggaggggagagttttgggaggttggaaatatatagataaatagacaaaaaattcatattttttgaaagaacaa-ttttttagagaatgataaactaatac 23163659  T
Q  530 ttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| |||||    
T  23163658 ttatgattaatatacttttaatttt 23163634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 431 - 554
Target Start/End: Complemental strand, 25428901 - 25428779
Alignment:
Q  431 ggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatact 530  Q
    ||||||||||||||||| ||||| ||||||||||||||| ||| |||||||||||||||||||||||||| | ||||||||||||||||||| |||||||    
T  25428901 ggaggggagtgttttgggggttgaaaatatatagaaaaaaggataaaaaattcacattttttgaaagaac-agttttttagagaatgataaaataatact 25428803  T
Q  531 tatgattaatatactttttatttt 554  Q
    |||||||||||||||||| |||||    
T  25428802 tatgattaatatacttttaatttt 25428779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 44411972 - 44412125
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 499  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||||| || |||||||||||||||||||| ||||||||| |||||||||||| ||||||    
T  44411972 aggctttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaattgacaaaaaaattcacatttttttaaagaa 44412071  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||  ||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  44412072 cag-ttttttagagaatgataaattaatacttacgattaatatacttttaatttt 44412125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 47714492 - 47714643
Alignment:
Q  406 tttgtttgggaatttggaggggaaa---ggaggggagtgttttgg-aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 501  Q
    ||||||||||| ||||||||||||    ||||||||| | ||||| |||||| |||||||||||||||| |||||||||||||||||||||||||||||     
T  47714492 tttgtttgggagtttggaggggaagaagggaggggagggctttgggaggttgaaaatatatagaaaaatagacaaaaaattcacattttttgaaagaac- 47714590  T
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    | |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  47714591 atttttttagagaatgataagctaatacttatgattaatatacttttaatttt 47714643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 17642852 - 17642700
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgtttt-ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    |||||||||||| || |||||| | ||| ||||||||| ||||| ||||||||||||||||||||||||| || |||||||||||||||||| ||||||     
T  17642852 aggctttgtttgagagtttggatgagaatggaggggagcgttttcggaggttggaaatatatagaaaaatagataaaaaattcacatttttttaaagaat 17642753  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |  ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  17642752 ag-ttttttagagaatgataaactaatatttatgattaatatacttttaatttt 17642700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 406 - 554
Target Start/End: Complemental strand, 46017464 - 46017316
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgtttt-ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 504  Q
    ||||||||||| |||||||  ||| ||||||||  ||||| || |||||||||||||||||||||| || |||||||||||||||||||||||||| |||    
T  46017464 tttgtttgggagtttggagaagaagggaggggatagttttagggggttggaaatatatagaaaaatagataaaaaattcacattttttgaaagaac-aat 46017366  T
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  46017365 tttttagagaatgataaaataaaacttatgattaatatacttttaatttt 46017316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 36796688 - 36796535
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggag-gttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 499  Q
    ||||||||||||||| ||||||||  || ||||||||| | ||||| | |||| |||||||||||||||||||||||||| |||||||||||||||||||    
T  36796688 aggctttgtttgggagtttggaggaaaagggaggggagggctttggggagttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 36796589  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||  || |||||||||||||||||||||| ||||||||||||||||||| |||||    
T  36796588 cag-ttatttagagaatgataaactaatatttatgattaatatacttttaatttt 36796535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 30131704 - 30131856
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtg-ttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| ||||||||| ||  ||  |||| | ||| || ||||||||| |||||||||||||||||||||||| ||||||||||||||| |    
T  30131704 aggctttgtttgggagtttggagggaaagagaatggagggctttggggggttggaaaaatatagaaaaatggacaaaaaatttacattttttgaaagagc 30131803  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  30131804 -agttttttagagaatgataaactaatacttatgattaatatacttttaatttt 30131856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 43007346 - 43007492
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 501  Q
    |||||||||||| || |||||||||||| ||  ||||| ||||| | |||||||||||||||||||||||||||||||||| |  |||||| ||||||||    
T  43007346 aggctttgtttgagagtttggaggggaaggg--gggagggttttcg-ggttggaaatatatagaaaaatggacaaaaaattta--tttttttaaagaaca 43007440  T
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
      ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  43007441 g-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 43007492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 446 - 554
Target Start/End: Complemental strand, 2420877 - 2420770
Alignment:
Q  446 ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatact 545  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||| | |   ||||||||||||||||||||||||||||||||||||||||||    
T  2420877 ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttaaaacagc-ggttttttagagaatgataaactaatacttatgattaatatact 2420779  T
Q  546 ttttatttt 554  Q
    ||| |||||    
T  2420778 tttaatttt 2420770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 421 - 554
Target Start/End: Complemental strand, 7661282 - 7661147
Alignment:
Q  421 ggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatg--gacaaaaaattcacattttttgaaagaacaaattttttagagaatga 518  Q
    ||||| ||| ||||| ||| | ||||| ||||||||||||||| |||||    ||||||||||||||||||||||||||||||| |||||||||||||||    
T  7661282 ggaggagaagggaggagagggctttgggggttggaaatatataaaaaaaataagacaaaaaattcacattttttgaaagaacaatttttttagagaatga 7661183  T
Q  519 taaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||| |||||||| |||||    
T  7661182 taaactaatacttatgattaacatacttttaatttt 7661147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 410 - 547
Target Start/End: Complemental strand, 34306852 - 34306715
Alignment:
Q  410 tttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttt 508  Q
    ||||||| | |||||||||| |||| |||| ||||||| || |||||||||||||||||||| ||||||||||||| ||||||||||| ||| | |||||    
T  34306852 tttgggagtatggaggggaagggagtggagggttttggggggttggaaatatatagaaaaattgacaaaaaattcagattttttgaaataac-agttttt 34306754  T
Q  509 tagagaatgataaactaatacttatgattaatatacttt 547  Q
    || ||||||||||||||||| ||||||||||||||||||    
T  34306753 tatagaatgataaactaatatttatgattaatatacttt 34306715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 401 - 554
Target Start/End: Complemental strand, 55439849 - 55439695
Alignment:
Q  401 taggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 499  Q
    |||||||||||||||| |||||||||||| ||||||||| | |  || || ||| ||||| ||||||||||| ||||||||||||  ||||||||| |||    
T  55439849 taggctttgtttgggagtttggaggggaagggaggggagggctccggggggttgaaaatacatagaaaaatgcacaaaaaattcaatttttttgaatgaa 55439750  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |   ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  55439749 cggtttttttagataatgataaactaatacttatgattaatatacttttaatttt 55439695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 449 - 554
Target Start/End: Original strand, 33982605 - 33982709
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||| |||||||||||||| |||| |||||||||||    
T  33982605 ggttggaaatatatagaaaaatggataaaaaattcacattttttgaaagaac-agttttttagagaataataaactaatacttgtgataaatatactttt 33982703  T
Q  549 tatttt 554  Q
     |||||    
T  33982704 aatttt 33982709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 441 - 554
Target Start/End: Complemental strand, 38526376 - 38526264
Alignment:
Q  441 gttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaat 540  Q
    |||||||  |||||||||||||| ||||||||| |||||||||||||||||||||| ||||  ||||||||| |||||||||||||||||||||||||||    
T  38526376 gttttgggagttggaaatatataaaaaaatggataaaaaattcacattttttgaaaaaacag-ttttttagacaatgataaactaatacttatgattaat 38526278  T
Q  541 atactttttatttt 554  Q
    |||||||| |||||    
T  38526277 atacttttaatttt 38526264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 397 - 533
Target Start/End: Complemental strand, 45555908 - 45555769
Alignment:
Q  397 aacttaggctttgtttgggaatttggaggggaaaggaggggagtg------ttttggaggttggaaatatatagaaaaatggacaaaaaattcacatttt 490  Q
    |||| ||||||||||||||| |||||||||||| ||| ||||| |      ||| || |||||||||||||  |||||||||||||||||||||||||||    
T  45555908 aactaaggctttgtttgggagtttggaggggaatggaagggaggggagggctttggggggttggaaatata--gaaaaatggacaaaaaattcacatttt 45555811  T
Q  491 ttgaaagaacaaattttttagagaatgataaactaatacttat 533  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  45555810 ttgaaagaac-aattttttagagaatgataaactaatacttat 45555769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 443 - 534
Target Start/End: Original strand, 27055772 - 27055863
Alignment:
Q  443 tttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatg 534  Q
    ||||| ||||||||||||||| |||||||||||||||||  ||||||||||||| ||||  |||||||||||||||||||||||||||||||    
T  27055772 tttgggggttggaaatatataaaaaaatggacaaaaaatcaacattttttgaaaaaacagtttttttagagaatgataaactaatacttatg 27055863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 462 - 554
Target Start/End: Original strand, 46312298 - 46312390
Alignment:
Q  462 tagaaaaatggacaaaaaattcacatttttt-gaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||| |||||||||||||||||| ||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||| |||||    
T  46312298 tagaaaaatggataaaaaattcacatttttttgaaagaacagatttt-tagagaatgataaactaatatttatgattaatatacttttaatttt 46312390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 651 - 863
Target Start/End: Original strand, 11634190 - 11634402
Alignment:
Q  651 ctgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataaca-gtcattccccgttatgaatcataactgaaggttacagaacagct 749  Q
    ||||||||||| ||||||||  | || | | |||||||| |||||||||| |||| ||| ||||||||||||||||||||||| |||| ||| |||| ||    
T  11634190 ctgttcttgaggattttatccacctcgtaaacgcatatcctcccaggatacaacatgtccttccccgttatgaatcataactgcaggtaacacaacaact 11634289  T
Q  750 caaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatg--agaaaataattatgtgtataaagaaatataaa-tgagagagc 846  Q
    |||||| |||| ||| |||||   ||||| ||| |||||||||| ||||||| |||  ||||||||||  |||||||| ||||| ||||| ||||||||     
T  11634290 caaatttatct-aaaaataacataagatgcaactcagaaactcaatattttg-atgatagaaaataat--tgtgtatagagaaacataaagtgagagagt 11634385  T
Q  847 atatatgtgtatactat 863  Q
    || ||||||||||||||    
T  11634386 atgtatgtgtatactat 11634402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 59; E-Value: 2e-24
Query Start/End: Original strand, 443 - 554
Target Start/End: Complemental strand, 38593177 - 38593063
Alignment:
Q  443 tttggaggttggaaatatatagaaaaatg----gacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgatta 538  Q
    ||||| ||||||| |||||||||||||||    || |||||||||||||||||| |||||||   |||||||||||||||||||||||||||||||||||    
T  38593177 tttgggggttggatatatatagaaaaatgaagagaaaaaaaattcacatttttttaaagaacgg-ttttttagagaatgataaactaatacttatgatta 38593079  T
Q  539 atatactttttatttt 554  Q
    |||| ||||| |||||    
T  38593078 atatgcttttaatttt 38593063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 469 - 548
Target Start/End: Original strand, 42583183 - 42583263
Alignment:
Q  469 atggacaaaaaattcacattttttgaaagaacaaatttt-ttagagaatgataaactaatacttatgattaatatactttt 548  Q
    |||||||||||||||| ||||||||||||||||  |||| |||||||||||||||||| ||||||||||||||||||||||    
T  42583183 atggacaaaaaattcatattttttgaaagaacagttttttttagagaatgataaactagtacttatgattaatatactttt 42583263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 479 - 554
Target Start/End: Original strand, 31178143 - 31178217
Alignment:
Q  479 aattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||| ||||||||  |||||||| |||||||||||||||| ||||||||||||||||||| |||||    
T  31178143 aattcacattttttaaaagaacag-ttttttagtgaatgataaactaatagttatgattaatatacttttaatttt 31178217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 450 - 543
Target Start/End: Original strand, 15499166 - 15499258
Alignment:
Q  450 gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 543  Q
    ||||||||||||||||||||| |  |||   |||||||||||||||| |  ||||||| |||||||||||||| ||||||||||||||||||||    
T  15499166 gttggaaatatatagaaaaatagtaaaatctttcacattttttgaaatagtaaatttt-tagagaatgataaaataatacttatgattaatata 15499258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 477 - 548
Target Start/End: Complemental strand, 7302272 - 7302201
Alignment:
Q  477 aaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    |||| ||||||||||| |||||| |  |||||||||||||||||||  ||||||||||||||||||| ||||    
T  7302272 aaaactcacatttttttaaagaatattttttttagagaatgataaatcaatacttatgattaatatattttt 7302201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 481 - 556
Target Start/End: Complemental strand, 30697554 - 30697480
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattttta 556  Q
    ||||||||||||||||||  |  ||||||||||||||||||||||||  |||||||||||||| |||| |||||||    
T  30697554 ttcacattttttgaaagattat-ttttttagagaatgataaactaatgtttatgattaatatatttttaattttta 30697480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 481 - 554
Target Start/End: Complemental strand, 32859012 - 32858941
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||  ||  |||||||||||||||||| ||||||||| |||||||||| |||| |||||    
T  32859012 ttcacattttttgaaagagtaa--tttttagagaatgataaattaatacttacgattaatatatttttaatttt 32858941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 475 - 556
Target Start/End: Complemental strand, 11500292 - 11500211
Alignment:
Q  475 aaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattttta 556  Q
    |||||| ||| ||||||||||||||  | ||||||||||||||||||| ||||  |||| ||||||||| |||||| |||||    
T  11500292 aaaaaaatcatattttttgaaagaatgatttttttagagaatgataaattaatgtttataattaatatattttttaatttta 11500211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 31651268 - 31651415
Alignment:
Q  406 tttgtttgggaatttggaggggaa-aggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 504  Q
    |||||||||||||||| ||||||  |||||||||| ||||||| ||||| |||||||   |||||||   |||   || | |||||||||||||  || |    
T  31651268 tttgtttgggaatttgaaggggaggaggaggggag-gttttgggggttgaaaatataggaaaaaatgataaaaccttttagattttttgaaagagtaa-t 31651365  T
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||| |||| |||| ||||||||||||||| |||| |||||    
T  31651366 tttttagagaatgttaaattaatgcttatgattaatatatttttaatttt 31651415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 4247280 - 4247228
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  4247280 aattttttagagaatgataaattaatgcttatgattaatatatttttaatttt 4247228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 46891547 - 46891497
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||| ||||||| |||||||||||||||||||| |||| |||||    
T  46891547 ttttttagagactgataaattaatacttatgattaatatatttttaatttt 46891497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 13638586 - 13638537
Alignment:
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  13638586 tttttagagaatgataaattaatgcttatgattaatatatttttaatttt 13638537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 444
Target Start/End: Complemental strand, 30132097 - 30132052
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttt 444  Q
    ||||||||||||||||||||||||||||||  ||||||||| ||||    
T  30132097 cttaggctttgtttgggaatttggaggggaggggaggggagggttt 30132052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 398 - 438
Target Start/End: Complemental strand, 3537473 - 3537433
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggagggga 438  Q
    ||||||||||||||||||| |||||||||||| ||||||||    
T  3537473 acttaggctttgtttgggagtttggaggggaagggagggga 3537433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 561 - 609
Target Start/End: Original strand, 11634076 - 11634124
Alignment:
Q  561 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 609  Q
    ||||||||||||||| |||  ||||||||| ||||||||||||||||||    
T  11634076 aacttatcgaatttgattgcagacacagcttcatcaaaatcttcacaaa 11634124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 449 - 489
Target Start/End: Complemental strand, 38593278 - 38593238
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattt 489  Q
    ||||||||||||||||||||||||| | |||||||||||||    
T  38593278 ggttggaaatatatagaaaaatggatataaaattcacattt 38593238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 42134608 - 42134660
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||| |||||||||  |||||||||||||| |||| |||||    
T  42134608 aattttttagagaatgctaaactaatgtttatgattaatatatttttaatttt 42134660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 446
Target Start/End: Original strand, 2420534 - 2420581
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttg 446  Q
    |||||||||||||||||| ||| |||||||| ||||||||| ||||||    
T  2420534 cttaggctttgtttgggagtttagaggggaatggaggggagggttttg 2420581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 548
Target Start/End: Complemental strand, 23568242 - 23568180
Alignment:
Q  485 cattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||||||| || ||||||  ||||||||||| ||||  |||||||||||||||||||    
T  23568242 cattttttgaaagaataacttttttt-agaatgataaattaatgattatgattaatatactttt 23568180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 554
Target Start/End: Complemental strand, 27681965 - 27681914
Alignment:
Q  503 attttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  27681965 attttttagagagtgataaattaatgcttatgattaatatatttttaatttt 27681914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 439
Target Start/End: Original strand, 38456485 - 38456524
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggag 439  Q
    ||||||||||||||||| |||||||||||| |||||||||    
T  38456485 ttaggctttgtttgggagtttggaggggaagggaggggag 38456524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 502 - 548
Target Start/End: Complemental strand, 29623399 - 29623353
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||| |||||||||||||| ||||||||| ||||| ||||    
T  29623399 aattttttagaaaatgataaactaatgcttatgattcatatattttt 29623353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 51686667 - 51686617
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| |||| | |||||||| |||| ||||||||||    
T  51686667 ttttttagagaatgataaattaatgcatatgattactatattttttatttt 51686617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 54748472 - 54748422
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  54748472 ttttttagagagtgataaattaatgcttatgattaatatatttttaatttt 54748422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 1132833 - 1132905
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||  || ||||||||||||||||||| ||||  | ||| |||||||| |||| |||||    
T  1132833 ttcacattttttgaaagagtaa-ttttttagagaatgataaattaatgttcatggttaatatatttttaatttt 1132905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 444
Target Start/End: Original strand, 2927730 - 2927775
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttt 444  Q
    ||||||||||||||| || |||| ||||||| ||||||||||||||    
T  2927730 cttaggctttgtttgcgagtttgcaggggaagggaggggagtgttt 2927775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 407 - 448
Target Start/End: Complemental strand, 18257876 - 18257835
Alignment:
Q  407 ttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    ||||||| || |||||||||||||||||||||| ||||||||    
T  18257876 ttgtttgcgagtttggaggggaaaggaggggagagttttgga 18257835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 554
Target Start/End: Complemental strand, 40674290 - 40674218
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||  || ||||||||||  |||||||  ||||||| ||||||||||| |||| |||||    
T  40674290 ttcacattttttgaaagag-aatttttttagagtgtgataaatcaatacttgtgattaatatatttttaatttt 40674218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 439
Target Start/End: Complemental strand, 47789655 - 47789618
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggag 439  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  47789655 aggctttgtttgggagtttggaggggaagggaggggag 47789618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 418 - 554
Target Start/End: Original strand, 54089288 - 54089425
Alignment:
Q  418 tttggaggggaaaggaggggagtgttttgga-ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaat 516  Q
    |||||||||||  ||||||||  |||||||| ||||||| |||||  |||||||||  |||   |||| |||||||||||||  || ||||| | | |||    
T  54089288 tttggaggggaggggaggggaaggttttggatggttggagatataaggaaaaatggtaaaatgtttcaaattttttgaaagagtaattttttaaaaaaat 54089387  T
Q  517 gataaactaatacttatgattaatatactttttatttt 554  Q
    |||||| ||||  | |||||||||||| |||| |||||    
T  54089388 gataaattaatgttaatgattaatatatttttaatttt 54089425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1562 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold1562
Description:

Target: scaffold1562; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 399 - 554
Target Start/End: Complemental strand, 406 - 251
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaa-aaaattcacattttttgaaag 497  Q
    ||||| ||||||||| || |||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  406 cttagactttgtttgagagtttggaggggaagggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaag 307  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  306 aac-aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1158 (Bit Score: 109; Significance: 2e-54; HSPs: 1)
Name: scaffold1158
Description:

Target: scaffold1158; HSP #1
Raw Score: 109; E-Value: 2e-54
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 2187 - 2342
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggac-aaaaaattcacattttttgaaag 497  Q
    ||||| ||||||||| || |||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2187 cttagactttgtttgagagtttggaggggaagggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaag 2286  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2287 aac-aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 2342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 4e-53; HSPs: 59)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 4e-53
Query Start/End: Original strand, 623 - 793
Target Start/End: Complemental strand, 21189527 - 21189357
Alignment:
Q  623 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 722  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||| ||||| |||||| ||||||||||||||    
T  21189527 ttatctaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctccccggatacaacagttattccccgttatga 21189428  T
Q  723 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactca 793  Q
    |||||||||| |||| |||||||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  21189427 atcataactggaggtgacagaacaactcaaaataatctcaaagataaccggagatgtaacccagaagctca 21189357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 398 - 554
Target Start/End: Complemental strand, 40357724 - 40357568
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaa-aaaattcacattttttgaaa 496  Q
    ||||||||||||||||| | |||||||||||| ||||||||| ||||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  40357724 acttaggctttgtttggaagtttggaggggaagggaggggagagttttgggggttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaa 40357625  T
Q  497 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||| | |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  40357624 gaac-agttttttagagaatgataaactaatacttatgattaatataattttaatttt 40357568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 398 - 554
Target Start/End: Original strand, 18018413 - 18018568
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcaca-ttttttgaaa 496  Q
    |||||| |||||||||||| |||||||||||| ||| ||||| | ||||| ||||| |||||||||||||||||||| ||||||||||| ||||||||||    
T  18018413 acttagactttgtttgggagtttggaggggaagggatgggagggctttgggggttgaaaatatatagaaaaatggac-aaaaattcacatttttttgaaa 18018511  T
Q  497 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  18018512 gaac-aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 18018568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 398 - 554
Target Start/End: Original strand, 36567092 - 36567248
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 496  Q
    ||||||||||||| || || |||||||||||| ||||||||| | ||||| || ||| |||||||||||||||||||||||||||||||||||||| |||    
T  36567092 acttaggctttgtctgtgagtttggaggggaagggaggggagggctttggggggttgaaaatatatagaaaaatggacaaaaaattcacatttttttaaa 36567191  T
Q  497 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36567192 gaacga-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 36567248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 25955649 - 25955804
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||||| |||||||||||||| ||||||| | ||||| || |||||||||||||||||||||||| ||||||||||| ||||| ||||    
T  25955649 cttaggctttgtttgggagtttggaggggaaagaaggggagggctttggtgggttggaaatatatagaaaaatggacgaaaaattcacaatttttaaaag 25955748  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||  ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  25955749 aacag-ttttttagataatgataaactaatacttatgattaatatacttttaatttt 25955804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 427 - 554
Target Start/End: Complemental strand, 7184358 - 7184232
Alignment:
Q  427 gaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaa 526  Q
    |||||||||||||   ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||    
T  7184358 gaaaggaggggaggactttagaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agttttttagagaatgataaactaa 7184260  T
Q  527 tacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||| |||||    
T  7184259 tacttatgattaatatacttttaatttt 7184232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 425 - 554
Target Start/End: Original strand, 8410770 - 8410900
Alignment:
Q  425 gggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaac 523  Q
    ||||| ||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||     
T  8410770 gggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaggttttttagagaatgataaat 8410869  T
Q  524 taatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||||||| |||||    
T  8410870 taatacttatgattaatatacttttaatttt 8410900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 95; E-Value: 5e-46
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 31550079 - 31550232
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttg-gaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaa 499  Q
    |||||||||||||||||||||||||||| ||||| |||  ||||| | |||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  31550079 aggctttgtttgggaatttggaggggaagggaggagaggattttgaggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa 31550178  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     |  ||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  31550179 tag-ttttttagagaatgataaactaatagttatgattaatatacttttaatttt 31550232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 14008147 - 14008299
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggagggga-gtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| |||||||||||| |||||||| |  ||| || |||| ||||||||||||||||||||||||||||||| |||||||||||||||    
T  14008147 aggctttgtttgggagtttggaggggaagggaggggatgactttggggggttcgaaatatatagaaaaatggacaaaaaattcatattttttgaaagaac 14008246  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     | | ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  14008247 -agtcttttagagaatgataaactaatacttatgattaatatacttttgatttt 14008299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 400 - 554
Target Start/End: Original strand, 8990779 - 8990933
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||| ||||||||||| |||||||||||| | ||||||| | ||||| || |||||||||||||||||||||||||||| ||||| |||||||||||||    
T  8990779 ttaggttttgtttgggagtttggaggggaaggaaggggagggctttggggggttggaaatatatagaaaaatggacaaaatattcatattttttgaaaga 8990878  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    || | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  8990879 ac-agttttttagaaaatgataaactaatacttatgattaatatacttttaatttt 8990933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 10165678 - 10165524
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    |||| |||||||||| | |||||||||||| |||| |||| | ||||| || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  10165678 ttagcctttgtttggaagtttggaggggaagggagaggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttaaaaga 10165579  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    || | |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  10165578 ac-agttttttagagaatgataaactaatacgtatgattaatatacttttaatttt 10165524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 38294153 - 38293999
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||| ||||||||||| |||||||||||| |||||||||   |||||||| ||| ||||||||||||||||| | |||| |||||||||||||||||||    
T  38294153 ttaggttttgtttgggagtttggaggggaagggaggggaggactttggaggattgaaaatatatagaaaaatgaataaaagattcacattttttgaaaga 38294054  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38294053 acag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 38293999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 400 - 554
Target Start/End: Original strand, 18826047 - 18826196
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 499  Q
    ||||||||||||||||| |||||||||||| ||||||     | | || | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  18826047 ttaggctttgtttgggagtttggaggggaagggagggc----tctaggggattggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 18826142  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    | | |||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  18826143 c-agttttttagagaatgatgaactaatacttatgattaatatacttttaatttt 18826196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 632 - 800
Target Start/End: Complemental strand, 2590617 - 2590449
Alignment:
Q  632 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 731  Q
    ||||||||||||||||||||||| |||||| |||||||  || |||| |||||||||| |||||||||| ||||||  |||||||||||||||||||||     
T  2590617 ctgaggcgtgacatagtcactgtccttgaggattttattcgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataacc 2590518  T
Q  732 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtatttt 800  Q
    | |||| |||||||| |||||||| |||||| ||||| | |||||| ||||||||||||||| ||||||    
T  2590517 ggaggtgacagaacaactcaaatttatctcatagatatcaggagatataacccagaaactcaatatttt 2590449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 397 - 554
Target Start/End: Original strand, 13765749 - 13765909
Alignment:
Q  397 aacttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttgg----aaatatatagaaaaatggacaaaaaattcacatttttt 492  Q
    |||||||||||||||||||| |||||||| ||||||||||||| | ||||| ||  ||    ||||||||||||||||||| |||||| |||||||||||    
T  13765749 aacttaggctttgtttgggagtttggaggagaaaggaggggagggctttggggggggggtgaaaatatatagaaaaatggataaaaaaatcacatttttt 13765848  T
Q  493 gaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| |||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  13765849 gaaggaacag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 13765909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 404 - 554
Target Start/End: Complemental strand, 4042225 - 4042075
Alignment:
Q  404 gctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaa 502  Q
    |||||||||||||  |||||||||||  |||||||| ||||||| || ||| ||||||||||||||||||||||||| |||||||||||| |||| |||     
T  4042225 gctttgtttgggagcttggaggggaagagaggggagggttttggggggttgaaaatatatagaaaaatggacaaaaagttcacatttttttaaagtacag 4042126  T
Q  503 attttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4042125 -ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 4042075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 425 - 554
Target Start/End: Original strand, 38023288 - 38023417
Alignment:
Q  425 gggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaattttttagagaatgataaac 523  Q
    ||||| ||||||||| ||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||    
T  38023288 gggaagggaggggagggttttgggggttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacag-ttttttagagaatgataaac 38023386  T
Q  524 taatacttatgattaatatactttttatttt 554  Q
    |||| |||||||||||||||||||| |||||    
T  38023387 taattcttatgattaatatacttttaatttt 38023417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 450 - 554
Target Start/End: Complemental strand, 32243690 - 32243586
Alignment:
Q  450 gttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  32243690 gttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaacaa-ttttttagagaatgataaactaatacttatgattaatatactttt 32243592  T
Q  549 tatttt 554  Q
     |||||    
T  32243591 aatttt 32243586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 405 - 554
Target Start/End: Original strand, 8555597 - 8555746
Alignment:
Q  405 ctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaa 503  Q
    |||||||||||| ||||||||| || ||| || || || |||| || ||  |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  8555597 ctttgtttgggagtttggagggaaagggatggaagggtgttggggggttaaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-aa 8555695  T
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     |||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  8555696 ctttttagagaatgataaactaatatttatgattaatatacttttaatttt 8555746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 450 - 554
Target Start/End: Complemental strand, 726162 - 726059
Alignment:
Q  450 gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttttt 549  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||     
T  726162 gttggaaatatatagaaaaatgaacaaaaaattcactttttctgaaagaacaa-ttttttagagaatgataaactaatacttatgattaatatactttta 726064  T
Q  550 atttt 554  Q
    |||||    
T  726063 atttt 726059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 405 - 554
Target Start/End: Complemental strand, 19383138 - 19382988
Alignment:
Q  405 ctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaa 503  Q
    |||||||||||| ||||||| |||| ||||| ||| | ||||| || ||| |||||||||||||||||||||||||||||||||||||| |||||||  |    
T  19383138 ctttgtttgggagtttggagaggaagggaggagagggctttggggggttgaaaatatatagaaaaatggacaaaaaattcacatttttttaaagaacgga 19383039  T
Q  504 ttttttagagaatgat-aaactaatacttatgattaatatactttttatttt 554  Q
     ||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  19383038 -tttttagagaatgataaaactaatacttatgattaatatacttttaatttt 19382988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 404 - 554
Target Start/End: Original strand, 31899176 - 31899326
Alignment:
Q  404 gctttgtttgggaatttggaggggaaaggag-gggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaa 502  Q
    ||||||||||||| |||||||||||| |||| || |   ||| || ||||||||||||||||||||||| |||||||||||||| ||||||||||||| |    
T  31899176 gctttgtttgggagtttggaggggaagggagaggaaaactttggggggttggaaatatatagaaaaatgaacaaaaaattcacaatttttgaaagaac-a 31899274  T
Q  503 attttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     ||||||||||| ||||||||||||| ||||||||||||||||||| |||||    
T  31899275 gttttttagagactgataaactaatagttatgattaatatacttttaatttt 31899326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 80; E-Value: 5e-37
Query Start/End: Original strand, 410 - 554
Target Start/End: Complemental strand, 44020590 - 44020450
Alignment:
Q  410 tttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttt 508  Q
    ||||||| |||||||||||| ||||| ||| ||||||| || ||| ||||||||||||||||||||||||  ||||  |||||||||||||||| |||||    
T  44020590 tttgggagtttggaggggaagggaggagagggttttggggggttgaaaatatatagaaaaatggacaaaa--ttca--ttttttgaaagaacaa-ttttt 44020496  T
Q  509 tagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||||||||||||||||||| |||||    
T  44020495 tagagaatgataaactaatacttatgattaatatacttttaatttt 44020450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 402 - 543
Target Start/End: Complemental strand, 1726159 - 1726022
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaac 500  Q
    |||||||||||| || |||||||| ||| ||||||||| | || || |||||||||||||||||||||||||||||||| |||||||||||||||||||     
T  1726159 aggctttgtttgagagtttggaggagaagggaggggagggcttggg-ggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaa- 1726062  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatata 543  Q
       ||||||||||||||||||||||||| ||||||||||||||    
T  1726061 ---ttttttagagaatgataaactaatatttatgattaatata 1726022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 403 - 554
Target Start/End: Original strand, 3038765 - 3038917
Alignment:
Q  403 ggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaa-tatatagaaaaatggacaaaaaa-ttcacattttttgaaagaac 500  Q
    ||||||||||||||  ||| ||||||| | | || || | ||||| |||| |||| ||||||||||||||||||||||| ||||||||||||||||||||    
T  3038765 ggctttgtttgggagcttgaaggggaaggaaaggaagggctttggcggtttgaaaatatatagaaaaatggacaaaaaaattcacattttttgaaagaac 3038864  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    || ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  3038865 aa-ttttttagaaaatgataaactaatacttatgattaatatacttttaatttt 3038917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 633 - 808
Target Start/End: Original strand, 18739113 - 18739289
Alignment:
Q  633 tgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataactg 732  Q
    |||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||  ||| ||| ||  ||||||||||||||||||||  |    
T  18739113 tgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccacaatacaacggttcttccccgttatgaatcataatcg 18739212  T
Q  733 aaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaa-ctcagtattttgtatgaga 808  Q
     |||| |||||||||||| |||| |||||||| ||| |  ||||||||||||||||| |||| ||||||| ||||||    
T  18739213 gaggtgacagaacagctcgaatttatctcaaatatatcatgagatgtaacccagaaacctcaatattttggatgaga 18739289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 452 - 554
Target Start/End: Complemental strand, 18780596 - 18780495
Alignment:
Q  452 tggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttat 551  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| | || ||||||||| |||||||||||| ||||||||||||||||||| ||    
T  18780596 tggaaatatataaaaaaatggacaaaaaattcacattttttgaaagaac-agttatttagagaacgataaactaatatttatgattaatatacttttaat 18780498  T
Q  552 ttt 554  Q
    |||    
T  18780497 ttt 18780495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 632 - 800
Target Start/End: Original strand, 35969278 - 35969442
Alignment:
Q  632 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 731  Q
    ||||||||||||||||||||||| |||||  |||||||| || |||  |||||||||||   || | || ||||||  |||||||||||||||||||||     
T  35969278 ctgaggcgtgacatagtcactgtccttgaagattttatccgcctcaaaagcgcatatca---catgtta-aacagttcttccccgttatgaatcataaca 35969373  T
Q  732 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtatttt 800  Q
    | |||| |||||||| |||||||| |||||||||||||||| |||||||||| ||||||||| ||||||    
T  35969374 ggaggtaacagaacaactcaaatttatctcaaagataaccgaagatgtaacctagaaactcaatatttt 35969442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 621 - 795
Target Start/End: Original strand, 14433589 - 14433764
Alignment:
Q  621 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataaca-gtcattccccgtta 719  Q
    |||||||||| ||||||||||||||||||||||| |||| | |||||||| || |||| ||  || ||| ||||| |||| |||| ||  ||||||||||    
T  14433589 tgttatgtaacctgaggcgtgacatagtcactgtccttgtggattttatccgcctcataagtacacatcttcccaagatacaacatgttcttccccgtta 14433688  T
Q  720 tgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagt 795  Q
    |||||||||||  ||||| |||||| | |||||||| |||||||||||| | |||||||||||| |||||| ||||    
T  14433689 tgaatcataaccaaaggtgacagaataactcaaatttatctcaaagatatcaggagatgtaacctagaaacccagt 14433764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 400 - 543
Target Start/End: Original strand, 30312242 - 30312386
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgt---tttggaggttggaaatatatagaaaaatggacaaaa-aattcacattttttgaa 495  Q
    |||||||||||||| || ||||||||||||  |||||||| |    ||||| ||||| |||||||||||||||| ||||||| ||||||||||||  |||    
T  30312242 ttaggctttgtttgagagtttggaggggaagagaggggagggaggctttgggggttgaaaatatatagaaaaatagacaaaataattcacatttt--gaa 30312339  T
Q  496 agaacaaattttttagagaatgataaactaatacttatgattaatata 543  Q
    ||||||  ||||||||||||||||||||||||||||||||||||||||    
T  30312340 agaacag-ttttttagagaatgataaactaatacttatgattaatata 30312386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 397 - 554
Target Start/End: Original strand, 12963787 - 12963941
Alignment:
Q  397 aacttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaa-tggacaaaaaattcacattttttgaa 495  Q
    |||| ||||||||||||||| |||||| ||||| ||  | ||| | ||||| || |||||||||||||||||| ||||||||||||||||||||| ||||    
T  12963787 aactaaggctttgtttgggagtttggatgggaaggg--gagagagctttgg-ggatggaaatatatagaaaaaatggacaaaaaattcacattttctgaa 12963883  T
Q  496 agaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    | ||||  ||||||||| ||||||||| || || ||||||||||||||||||| |||||    
T  12963884 ataacag-ttttttagaaaatgataaagtagtatttatgattaatatacttttaatttt 12963941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 6e-18
Query Start/End: Original strand, 449 - 508
Target Start/End: Original strand, 3119349 - 3119408
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttt 508  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||||    
T  3119349 ggttggaaatatataaaaaaatggacaaaaaattcacattttttgaaagaataatttttt 3119408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 435 - 516
Target Start/End: Complemental strand, 18562117 - 18562037
Alignment:
Q  435 gggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaat 516  Q
    ||||| ||||||| ||||||||||||||||||||||||| |||| ||||||||||||| ||| ||| | |||||||||||||    
T  18562117 gggagggttttgggggttggaaatatatagaaaaatggataaaatattcacattttttaaaacaac-agttttttagagaat 18562037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 45; E-Value: 4e-16
Query Start/End: Original strand, 454 - 554
Target Start/End: Complemental strand, 29880974 - 29880875
Alignment:
Q  454 gaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 553  Q
    |||||||||||||||||||  |||   |||||  ||||||||||| ||| |||||||||||||||||||| ||| ||||||||||||||| |||| ||||    
T  29880974 gaaatatatagaaaaatggtgaaatctttcactgtttttgaaagagcaa-ttttttagagaatgataaacgaatgcttatgattaatatatttttaattt 29880876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 649 - 780
Target Start/End: Complemental strand, 1043244 - 1043114
Alignment:
Q  649 cactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataactgaaggttacagaacagc 748  Q
    |||||| |||||| |||||||| |  ||||  ||||||||| |||||||||| ||| ||  ||||| ||||||||||||||  |  ||| |||||||||     
T  1043244 cactgtccttgaggattttatccgtctcataggcgcatatcctcccaggatacaaccgttcttccc-gttatgaatcataatcgggggtgacagaacagg 1043146  T
Q  749 tcaaattaatctcaaagataaccggagatgta 780  Q
    ||||||| |||||||||||||| |||||||||    
T  1043145 tcaaattcatctcaaagataacaggagatgta 1043114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 455 - 501
Target Start/End: Complemental strand, 43334970 - 43334924
Alignment:
Q  455 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 501  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||    
T  43334970 aaatatattgaaaaatggacaaaaaattcacattttttgaaagaaca 43334924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 449 - 502
Target Start/End: Original strand, 28009723 - 28009776
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaa 502  Q
    |||| |||||||||  ||||||||||||||||||||||||||||||||||||||    
T  28009723 ggttagaaatatatcaaaaaatggacaaaaaattcacattttttgaaagaacaa 28009776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 26599175 - 26599225
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||| |||||||||||||| |||||||||||||||||||| ||||||||||    
T  26599175 ttttctagagaatgataaaataatacttatgattaatatattttttatttt 26599225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 449 - 527
Target Start/End: Original strand, 14363375 - 14363454
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaa--ttcacattttttgaaagaacaaattttttagagaatgataaactaat 527  Q
    ||||| ||||||||||| ||||||| ||||||  |||||| ||||| ||||||||| ||||||||| ||||||||||||||    
T  14363375 ggttgaaaatatatagataaatggaaaaaaaactttcacactttttaaaagaacaa-ttttttagaaaatgataaactaat 14363454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 481 - 553
Target Start/End: Complemental strand, 30523460 - 30523389
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 553  Q
    ||||||||||||||||||  |  ||||||| ||||||||||| |||||||||||||||||||| |||| ||||    
T  30523460 ttcacattttttgaaagagtag-ttttttaaagaatgataaattaatacttatgattaatatatttttaattt 30523389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 481 - 548
Target Start/End: Complemental strand, 32951060 - 32950993
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||| |||| |||||  || ||||||||||||||||||| ||||| |||||||||||||| ||||    
T  32951060 ttcacatcttttaaaagagtaacttttttagagaatgataaattaatatttatgattaatatattttt 32950993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 502 - 548
Target Start/End: Original strand, 5972314 - 5972360
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    |||||||| |||||||||||| |||||||||||||||||||| ||||    
T  5972314 aatttttttgagaatgataaattaatacttatgattaatatattttt 5972360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 36030954 - 36030904
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  36030954 ttttttagagaatgataaattaatgcttatgattaatatatttttaatttt 36030904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 14008540 - 14008491
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    |||||||||| ||||||| |||||||||||| ||||||||| ||||||||    
T  14008540 cttaggctttctttgggagtttggaggggaagggaggggagggttttgga 14008491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 3120061 - 3120013
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    |||||||||||||| || ||||||||||| |||||||||| ||||||||    
T  3120061 ttaggctttgtttgagattttggaggggagaggaggggagggttttgga 3120013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 481 - 548
Target Start/End: Original strand, 16625703 - 16625768
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||||||||||  |  |||||||||||||||||||| ||| ||||||||| ||||| ||||    
T  16625703 ttcacattttttgaaagagta--ttttttagagaatgataaaccaatgcttatgattcatatattttt 16625768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 556
Target Start/End: Complemental strand, 11950183 - 11950108
Alignment:
Q  479 aattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgatt-aatatactttttattttta 556  Q
    |||||||||||||| |||||| |  ||||||||| ||||||||| ||||||||||| || |||||| ||||||||||||    
T  11950183 aattcacatttttttaaagaata--ttttttagataatgataaattaatacttatggttaaatata-tttttattttta 11950108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 439
Target Start/End: Complemental strand, 37201826 - 37201787
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggag 439  Q
    |||||||||||||| ||||||||||||||| |||||||||    
T  37201826 ttaggctttgtttgcgaatttggaggggaagggaggggag 37201787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 520 - 554
Target Start/End: Original strand, 3119788 - 3119822
Alignment:
Q  520 aaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||||||||||| |||||    
T  3119788 aaactaatacttatgattaatatacttttaatttt 3119822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 7310203 - 7310153
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||  |||||||| |||||||||| |||| |||||    
T  7310203 ttttttagagaatgataaataaatacttacgattaatatatttttaatttt 7310153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 18780254 - 18780300
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    ||||||||||||||| |||||||||||  ||||||||| ||||||||    
T  18780254 aggctttgtttgggagtttggaggggaggggaggggagggttttgga 18780300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 502 - 548
Target Start/End: Original strand, 30265277 - 30265323
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||||||| ||||| |||| ||||||||||||||| ||||    
T  30265277 aattttttagagaataataaattaatgcttatgattaatatattttt 30265323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 31550462 - 31550412
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    ||||||||||||||||||| ||||||| |||  ||||||||| ||||||||    
T  31550462 acttaggctttgtttgggagtttggagtggaggggaggggagggttttgga 31550412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 400 - 450
Target Start/End: Complemental strand, 42644910 - 42644860
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg 450  Q
    ||||||| ||||||||| |||||||||||| ||||| ||| ||||||||||    
T  42644910 ttaggctctgtttgggagtttggaggggaagggaggagagggttttggagg 42644860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 399 - 457
Target Start/End: Complemental strand, 44137343 - 44137285
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaa 457  Q
    |||||||||||||||||| |||||||||||| ||| ||||| | ||||| |||| ||||    
T  44137343 cttaggctttgtttgggagtttggaggggaagggaagggagggctttgggggtttgaaa 44137285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 3022855 - 3022806
Alignment:
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  3022855 tttttagagaatgataaattaatgtttatgattaatatatttttaatttt 3022806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 401 - 446
Target Start/End: Complemental strand, 3039158 - 3039113
Alignment:
Q  401 taggctttgtttgggaatttggaggggaaaggaggggagtgttttg 446  Q
    |||||||||||||||| ||||||||||| |||||| ||| ||||||    
T  3039158 taggctttgtttgggagtttggaggggagaggaggagagggttttg 3039113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 10165287 - 10165332
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttgg 447  Q
    ||||||||||||||| ||||||||||| |||| ||||| |||||||    
T  10165287 aggctttgtttgggagtttggaggggagaggaagggagagttttgg 10165332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 485 - 554
Target Start/End: Complemental strand, 13767597 - 13767529
Alignment:
Q  485 cattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||  || ||| ||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  13767597 cattttttgaaagagtaattttattagagaatgataaa-taatgtttatgattaatatatttttaatttt 13767529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 105; Significance: 6e-52; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 1658439 - 1658288
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 501  Q
    |||||||||||| || |||| ||||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||     
T  1658439 aggctttgtttgagagtttgaaggggaagggaggggagggttttgggggttggaaatatatagaaaaatggacaaaatattcacattttttgaaagaac- 1658341  T
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    | |||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  1658340 agttttttagagaatgataaactaatacttataattaatatacttttaatttt 1658288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 105; E-Value: 6e-52
Query Start/End: Original strand, 399 - 554
Target Start/End: Complemental strand, 17093163 - 17093008
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggag-tgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||||| |||||||||||| |||||| || | ||| || |||||||||||||||||||||||||||||||||||||||||||||||||    
T  17093163 cttaggctttgtttgggagtttggaggggaagggagggaaggtctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 17093064  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| || |||||||||||||||||||| ||||||||||||||||||||||| |||||    
T  17093063 aac-aactttttagagaatgataaacttatacttatgattaatatacttttaatttt 17093008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 4648798 - 4648957
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaag----gaggggagtgttttg-gaggttggaaatatatagaaaaatggacaaaaaattcacattttttg 493  Q
    |||||||||||||||||| |||||||||||| |    |||||||| | |||| | |||||||||||||||||||||||||||||||||||||||||||||    
T  4648798 cttaggctttgtttgggagtttggaggggaaggaagggaggggagggctttgaggggttggaaatatatagaaaaatggacaaaaaattcacattttttg 4648897  T
Q  494 aaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4648898 aaagaac-aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 4648957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 25598584 - 25598739
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||||| |||||||||||| |||||||||   ||||| || ||| |||||||||||||||||||||||||||||||||||||||||||    
T  25598584 cttaggctttgtttgggagtttggaggggaagggaggggaggactttggcgggttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaag 25598683  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| | |||||||||||||||||| |||||||||||||||||||||||||| |||||    
T  25598684 aac-agttttttagagaatgataagctaatacttatgattaatatacttttaatttt 25598739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 398 - 547
Target Start/End: Complemental strand, 35701670 - 35701521
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttg-gaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 496  Q
    |||||| |||||||||||| |||||||||||  ||||||||| | || | | ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35701670 acttagactttgtttgggagtttggaggggacgggaggggagggcttcgaggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 35701571  T
Q  497 gaacaaattttttagagaatgataaactaatacttatgattaatatacttt 547  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  35701570 gaac-agttttttagagaatgataaactaatacttatgattaatatacttt 35701521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 38302182 - 38302328
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttgg-aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 504  Q
    ||||||||||| |||||||||||| ||||||||| | ||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||||  |    
T  38302182 tttgtttgggagtttggaggggaagggaggggagggctttgggaggttggaaatata--gaaaaatggacaaaaaattcacattttttgaaagaacag-t 38302278  T
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38302279 tttttagagaatgataaactaatacttatgattaatatacttttaatttt 38302328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 406 - 554
Target Start/End: Complemental strand, 25027181 - 25027033
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttg-gaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 504  Q
    ||||||||||| |||||||||||| ||||||||| | |||| | |||||||||||||||||||||| ||||||||||||||||||||||||||||  |||    
T  25027181 tttgtttgggagtttggaggggaagggaggggagggctttgaggggttggaaatatatagaaaaattgacaaaaaattcacattttttgaaagaa-taat 25027083  T
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  25027082 tttttagagaatgataaactaatacttatcattaatatacttttaatttt 25027033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 623 - 811
Target Start/End: Complemental strand, 18594940 - 18594752
Alignment:
Q  623 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 722  Q
    |||||||| |||||||||||||| |||||||| |||||  |||||||| || |||| |||||||||  || ||||||| ||||||  |||||||||||||    
T  18594940 ttatgtaacctgaggcgtgacattgtcactgtccttgaagattttatccgcctcataagcgcatattctcacaggatacaacagttcttccccgttatga 18594841  T
Q  723 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgagaaaa 811  Q
    ||||||||||||||| |||||||| |||||||| || ||||||||| | |||||||||||||| ||||||| ||||||  |||||||||    
T  18594840 atcataactgaaggtgacagaacaactcaaatttatgtcaaagatatcaggagatgtaacccaaaaactcaatattttagatgagaaaa 18594752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 401 - 554
Target Start/End: Complemental strand, 33718445 - 33718292
Alignment:
Q  401 taggctttgtttgggaatttggaggggaaaggaggggagtgttttg-gaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 499  Q
    |||||||||||||||| |||||||||||| ||| | ||| | |||| | |||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  33718445 taggctttgtttgggagtttggaggggaagggatgagagggctttgtggggttggaaatatatagaaaaatggacaaaaaattcaaattttttaaaagaa 33718346  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    | | |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  33718345 c-agttttttagagaatgataaactaatacttatgattaatatatttttaatttt 33718292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 453 - 554
Target Start/End: Complemental strand, 35869041 - 35868941
Alignment:
Q  453 ggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatt 552  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||| |||    
T  35869041 ggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaatag-ttttttagagaatgataaactaatacttatgattaatatacttttaatt 35868943  T
Q  553 tt 554  Q
    ||    
T  35868942 tt 35868941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 399 - 554
Target Start/End: Complemental strand, 10295752 - 10295594
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtg-ttttggaggttggaaatatatagaaaaatggac-aaaaaattcacattttttgaaa 496  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||| || ||||| |||||||||||||||| ||| ||||||||||||||||||||||    
T  10295752 cttaggctttgtttgggagtttggaggggaagggaggggagggctttggggggttgaaaatatatagaaaaatagacaaaaaaattcacattttttgaaa 10295653  T
Q  497 gaacaaattttttagagaatgataaactaatact--tatgattaatatactttttatttt 554  Q
    |||  | |||| ||||||||||||||||||||||  |||||||||||||||||| |||||    
T  10295652 gaa-tagttttgtagagaatgataaactaatacttatatgattaatatacttttaatttt 10295594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 450 - 554
Target Start/End: Complemental strand, 32760972 - 32760867
Alignment:
Q  450 gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaatttttt-agagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||| |  |||||| |||||||||||||||||||||||||||||||||||||||    
T  32760972 gttggaaatatatagaaaattggacaaaaaattcacattttttgaaagaatatttttttttagagaatgataaactaatacttatgattaatatactttt 32760873  T
Q  549 tatttt 554  Q
     |||||    
T  32760872 aatttt 32760867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 399 - 548
Target Start/End: Original strand, 38120010 - 38120158
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||| ||||||||||    |||     
T  38120010 cttaggctttgtttgggagtttggaggggaagggaggggagagctttggggggttggaaatatatagaaaaatggacaaaatattcacatttaaaaaaaa 38120109  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||| | ||||||||| ||||||||||||||| |||||||||||||||||||    
T  38120110 aac-agttttttaga-aatgataaactaataattatgattaatatactttt 38120158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 27479989 - 27480142
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttgg-aggttggaaatatata------gaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    |||||||| || |||||||||||| |||||||||   ||||| ||||||||||||||||      ||||||||||||||||| |||||||||| ||||||    
T  27479989 tttgtttgagagtttggaggggaagggaggggaggactttgggaggttggaaatatatatatatagaaaaatggacaaaaaaatcacattttt-gaaaga 27480087  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||| |||||||||||||||||||||||||| |||||||||||||||||| |||||    
T  27480088 acaa-ttttttagagaatgataaactaatacatatgattaatatacttttaatttt 27480142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 26149865 - 26149714
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaaga 498  Q
    ||||||| ||||||||| | || ||||||| ||||||   | ||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  26149865 ttaggctctgtttgggagtatgaaggggaagggaggg---tttttggggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaaga 26149769  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
      |  ||||||||||||||||||||||||| |||||||| |||||||||| |||||    
T  26149768 ttag-ttttttagagaatgataaactaatatttatgattgatatacttttaatttt 26149714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 3e-29
Query Start/End: Original strand, 398 - 536
Target Start/End: Complemental strand, 41638630 - 41638498
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    ||||||||||| ||||||| |||| |||||||| ||||      ||| || |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41638630 acttaggctttatttgggagtttgaaggggaaaagaggt-----tttggggggttggaaatatatagaaaaatggacaaaaaattcacatttttttaaag 41638536  T
Q  498 aacaaattttttagagaatgataaactaatacttatgat 536  Q
    ||| | ||||||| ||||||||||||||||| |||||||    
T  41638535 aac-agttttttaaagaatgataaactaatagttatgat 41638498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 431 - 554
Target Start/End: Complemental strand, 2021214 - 2021091
Alignment:
Q  431 ggaggggagtgttttggaggttggaaatatatagaaaaa-tggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatac 529  Q
    ||||||||| | ||||| ||||||||||||||| ||||| | || |||||||||| ||| ||||||||||||  ||||||||||||||||||| |||||     
T  2021214 ggaggggagggctttgggggttggaaatatataaaaaaaattgataaaaaattcatattgtttgaaagaacag-ttttttagagaatgataaattaatat 2021116  T
Q  530 ttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| |||||    
T  2021115 ttatgattaatatacttttaatttt 2021091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 623 - 793
Target Start/End: Complemental strand, 39292224 - 39292061
Alignment:
Q  623 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 722  Q
    |||| ||| |||||| |||| ||||||||||| ||| || |||||||| || |||| |||||||||| | |||| ||| ||||||  ||| |||||||||    
T  39292224 ttatctaacctgaggtgtgatatagtcactgtccttaaggattttatccgcctcataagcgcatatccttccagaatacaacagttcttctccgttatga 39292125  T
Q  723 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactca 793  Q
    |||||       ||| ||| |||| |||||| |||||||||||||||||||||||||||||||||| ||||    
T  39292124 atcat-------ggtgacataacaactcaaaataatctcaaagataaccggagatgtaacccagaagctca 39292061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 449 - 533
Target Start/End: Original strand, 37508224 - 37508308
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcaca-ttttttgaaagaacaaattttttagagaatgataaactaatacttat 533  Q
    |||||||||||||||||||||||||||||||||||||| |||||| ||||||| | ||||||||||||| |||||||| |||||||    
T  37508224 ggttggaaatatatagaaaaatggacaaaaaattcacattttttttaaagaac-agttttttagagaataataaactagtacttat 37508308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 621 - 808
Target Start/End: Original strand, 26703007 - 26703195
Alignment:
Q  621 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataaca-gtcattccccgtta 719  Q
    |||||||||| |||| ||||||| |||||||||| |||||| |||||||| || |||| | |||||||| ||||| |||| |||| ||  ||| | | ||    
T  26703007 tgttatgtaacctgatgcgtgacttagtcactgtccttgaggattttatccgcctcataaacgcatatcctcccaagatacaacaagttcttctctggta 26703106  T
Q  720 tgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgaga 808  Q
    ||||||| ||| | |||| ||||||||| ||||||| |||||| ||||| |  |||||||||||   ||||||| ||||||| ||||||    
T  26703107 tgaatcaaaaccggaggtgacagaacagttcaaatttatctcacagatatcaagagatgtaacctgtaaactcaatattttggatgaga 26703195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 53; E-Value: 6e-21
Query Start/End: Original strand, 621 - 808
Target Start/End: Original strand, 26972740 - 26972928
Alignment:
Q  621 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataaca-gtcattccccgtta 719  Q
    |||||||||| |||| ||||||| |||||||||| |||||| |||||||| || |||| | |||||||| ||||| |||| |||| ||  ||| | | ||    
T  26972740 tgttatgtaacctgatgcgtgacttagtcactgtccttgaggattttatccgcctcataaacgcatatcctcccaagatacaacaagttcttctctggta 26972839  T
Q  720 tgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgaga 808  Q
    ||||||| ||| | |||| ||||||||| ||||||| |||||| ||||| |  |||||||||||   ||||||| ||||||| ||||||    
T  26972840 tgaatcaaaaccggaggtgacagaacagttcaaatttatctcacagatatcaagagatgtaacctgtaaactcaatattttggatgaga 26972928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 50; E-Value: 4e-19
Query Start/End: Original strand, 398 - 554
Target Start/End: Original strand, 9684605 - 9684761
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 496  Q
    ||||||||||||||||||| |||||||||||| ||| ||||  | || ||||| |||||||||||  | |||||||  |||   | ||||||||||||||    
T  9684605 acttaggctttgtttgggagtttggaggggaagggaagggaaggcttaggagggttggaaatataggggaaaatgggaaaatcttccacattttttgaaa 9684704  T
Q  497 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||  || ||||||||| ||||||||| |||| ||||||||||||||| |||| |||||    
T  9684705 gagtaa-ttttttagaaaatgataaattaatgcttatgattaatatatttttaatttt 9684761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000006
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 41695138 - 41695088
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  41695138 ttttttagagaatgataaattaatacttatgattaatatacttttgatttt 41695088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 13293902 - 13293954
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||| ||||||||||||| |||||||||||||||||||| ||||||||||    
T  13293902 aatttttaagagaatgataaattaatacttatgattaatatattttttatttt 13293954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 19389648 - 19389798
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    ||||| |||||||||||| |||||||||||     |||||  | |||||||| |||||||||| | | |||||||  |||   |||||| ||||||||||    
T  19389648 cttagactttgtttgggagtttggagggga-----ggggaaggctttggagggttggaaatatgtgggaaaatggtaaaatctttcacaatttttgaaag 19389742  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |  || ||||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  19389743 attaa-ttttttagagaatgataaattaatgcttatgattaatatatttttaatttt 19389798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 465 - 555
Target Start/End: Original strand, 27350888 - 27350977
Alignment:
Q  465 aaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattttt 555  Q
    ||||||||  |||||| ||||||||||| |||||  || |||||||||||| |||||| ||||  |||||||||||||| |||||| ||||    
T  27350888 aaaaatggtaaaaaaaatcacatttttttaaagagtaa-ttttttagagaacgataaattaatgattatgattaatatattttttaatttt 27350977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 481 - 554
Target Start/End: Complemental strand, 39012013 - 39011942
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||  |  ||||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  39012013 ttcacattttttgaaagatga--ttttttagagagtgataaattaatgcttatgattaatatatttttaatttt 39011942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 466 - 527
Target Start/End: Original strand, 7398664 - 7398724
Alignment:
Q  466 aaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaat 527  Q
    |||||||  ||||||||||||||||||| |||| | ||||||||||||||||||||| ||||    
T  7398664 aaaatggtaaaaaaattcacattttttgtaaga-ctaattttttagagaatgataaattaat 7398724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 28154850 - 28154801
Alignment:
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||| ||||  |||||||||||||| ||||||||||    
T  28154850 tttttagagaatgataaattaatgtttatgattaatatattttttatttt 28154801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 504 - 548
Target Start/End: Complemental strand, 6044694 - 6044650
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    |||||||||||||||||||||||||||||| ||| ||||| ||||    
T  6044694 ttttttagagaatgataaactaatacttatcattcatatattttt 6044650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 484 - 556
Target Start/End: Complemental strand, 6373319 - 6373247
Alignment:
Q  484 acattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattttta 556  Q
    |||||||||||||||  |  ||||||||| | ||||||| |||||||||||||||||| | |||||| |||||    
T  6373319 acattttttgaaagagtatgttttttagaaagtgataaattaatacttatgattaatacattttttaatttta 6373247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 508 - 554
Target Start/End: Complemental strand, 6491341 - 6491295
Alignment:
Q  508 ttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  6491341 ttagagaatgataaattaatgcttatgattaatatatttttaatttt 6491295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 481 - 543
Target Start/End: Original strand, 17668032 - 17668093
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 543  Q
    ||||||||||||||||| |  |||||||||| |||||||||| |||| |||||| ||||||||    
T  17668032 ttcacattttttgaaag-agtaattttttagggaatgataaattaatgcttatgcttaatata 17668093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 35700932 - 35700978
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    ||||||||||||||| |||||||||||  ||||||||| ||||||||    
T  35700932 aggctttgtttgggagtttggaggggaggggaggggagggttttgga 35700978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 444
Target Start/End: Complemental strand, 1935276 - 1935231
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttt 444  Q
    ||||||||||||||| || |||||||||||| ||||||||| ||||    
T  1935276 cttaggctttgtttgcgagtttggaggggaagggaggggagagttt 1935231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 554
Target Start/End: Complemental strand, 15399998 - 15399926
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||| |||||| ||| |||||||||||||| || | ||||  |||||||||||||| |||| |||||    
T  15399998 ttcacatttttcgaaagagcaa-ttttttagagaatgctagattaatttttatgattaatatatttttaatttt 15399926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 441 - 553
Target Start/End: Complemental strand, 28523842 - 28523730
Alignment:
Q  441 gttttggaggttgga-aatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaa 539  Q
    |||||||||| |||| ||||||  |||||||| | |||   |||| ||||||||||||||  | ||||||| ||||||||||| ||||  ||||||||||    
T  28523842 gttttggagggtggagaatatacggaaaaatgaaaaaatctttcatattttttgaaagaatga-ttttttaaagaatgataaattaatgtttatgattaa 28523744  T
Q  540 tatactttttattt 553  Q
    |||| |||| ||||    
T  28523743 tatatttttaattt 28523730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 449
Target Start/End: Original strand, 32824533 - 32824582
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggag 449  Q
    |||||||||||||| || |||||||| ||| ||||||||||| |||||||    
T  32824533 ttaggctttgtttgcgagtttggaggagaagggaggggagtgctttggag 32824582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 554
Target Start/End: Complemental strand, 35042387 - 35042315
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||| |||||||||||||  |||||||||||||||||||||| ||||  ||||||| | |||| |||| |||||    
T  35042387 ttcatattttttgaaagat-aaattttttagagaatgataaattaatgtttatgatcactatatttttaatttt 35042315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 104; Significance: 2e-51; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 399 - 553
Target Start/End: Complemental strand, 20534193 - 20534039
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaa-aaaattcacattttttgaaag 497  Q
    |||||||||||||||||| |||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||| |||||||||||||||||||||    
T  20534193 cttaggctttgtttgggagtttggaggggaagggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaaattcacattttttgaaag 20534094  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 553  Q
    |||   |||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  20534093 aac-cgttttttagagaatgataaactaatacttatgattaacatacttttaattt 20534039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 41844700 - 41844546
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||||||||||||||| |||||||||||| |||||||||   ||||| || ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  41844700 ttaggctttgtttgggagtttggaggggaagggaggggaggactttggggggttggaaacatatagaaaaatggacaaaaaattcacattttttgaaaga 41844601  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    || ||||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  41844600 ac-aattttttagagaatgataaattaatacttatgattaatatacttttaatttt 41844546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 103; E-Value: 9e-51
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 38366291 - 38366138
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 499  Q
    ||||||||||||||||| ||||||| |||| ||||||||| | ||||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  38366291 ttaggctttgtttgggagtttggagaggaagggaggggagggctttgggggttggaaatatatagaaaaattgacaaaaaattcacattttttgaaaaaa 38366192  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    || | ||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  38366191 caga-tttttagagaatgataaactaatacttatgattaatatatttttaatttt 38366138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 32648822 - 32648974
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||  |||||||||||| ||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||||||||||| |    
T  32648822 aggctttgtttgggggtttggaggggaagggaggggagggttttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagagc 32648921  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     | |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  32648922 -agttttttagagaatgataaactaatacttatgattaatatatttttaatttt 32648974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 398 - 554
Target Start/End: Complemental strand, 17873463 - 17873307
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 496  Q
    ||||||||||||||||| | |||||||||||| |||| ||||  |||||| || ||||||||||||||||||||| |||||||||||| ||||||| |||    
T  17873463 acttaggctttgtttggaagtttggaggggaagggagaggagaattttggggggttggaaatatatagaaaaatgcacaaaaaattcatatttttttaaa 17873364  T
Q  497 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  17873363 gaacaa-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 17873307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 399 - 554
Target Start/End: Complemental strand, 24280177 - 24280022
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggtt-ggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||||| ||| |||||||| ||||||||  | ||||| | || |||||||||||||||||||||||||||||||||||||||||||||    
T  24280177 cttaggctttgtttgggagtttcgaggggaagggaggggaaagctttggggatttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 24280078  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| | |||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  24280077 aac-agttttttagagaatgataaactaattcttatgattaatatacttttaatttt 24280022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 32060909 - 32060757
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| ||||||| |||| ||||||||| | ||||| || |||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  32060909 aggctttgtttgggagtttggagtggaagggaggggagggctttggggggttggaaatatatagaaaaatagacaaaaaattcacattttttgaaaaaac 32060810  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     | ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  32060809 -agttttttagagaatgataaattaatacttatgattaatatacttttaatttt 32060757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 3126827 - 3126982
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||| ||||||||||| |||||||||||| ||| ||||| | ||||| || ||| ||||||||| |||||||||||||||||||||||||||||||||    
T  3126827 cttaggttttgtttgggagtttggaggggaagggaagggagagctttggggggttgaaaatatatacaaaaatggacaaaaaattcacattttttgaaag 3126926  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  3126927 aac-agttttttagataatgataaactaatacttatgattaatatacttttaatttt 3126982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 24291651 - 24291496
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggagggga-gtgttttggaggtt-ggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    ||||||||||||||| | |||||||| ||| |||||||| | | ||||| |||| |||||||||||||||||||||||||||||||||||||||||||||    
T  24291651 ttaggctttgtttggaagtttggaggtgaagggaggggaagagctttgggggtttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 24291552  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| |  |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  24291551 aac-agctttttagagaatgataaactaatacttatgattaatatacttttaatttt 24291496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 36151189 - 36151340
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 501  Q
    ||||||| ||||||| |||||||||||| |||||||||   |||||| |||| |||||||||||||||||||||||||||||||||||||||||||||      
T  36151189 aggctttatttgggagtttggaggggaagggaggggaggactttggaagttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa-t 36151287  T
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    | ||||||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  36151288 agttttttagaaaatgataaactaatacttatgattaatatacatttaatttt 36151340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 17622295 - 17622442
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 504  Q
    ||||||||||| |||||||||||| ||||||||| | ||||| || |||||||||||||||||||||||||||||||||||||||||||||||||| | |    
T  17622295 tttgtttgggagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agt 17622393  T
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||||||  ||||| |||||||||||| |||||    
T  17622394 tttttagagaatgataaactaata-atatgactaatatacttttaatttt 17622442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 398 - 554
Target Start/End: Complemental strand, 904470 - 904308
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaagg------aggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacatttt 490  Q
    ||||||||||||||||||| |||||||||| ||||      ||||||| | ||||| || ||||||||||||||||||||||||||| ||||||||||||    
T  904470 acttaggctttgtttgggagtttggagggggaagggaagggaggggagggctttggggggttggaaatatatagaaaaatggacaaataattcacatttt 904371  T
Q  491 ttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||| |  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  904370 ttgaaagaatag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 904308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 451 - 554
Target Start/End: Original strand, 38317096 - 38317198
Alignment:
Q  451 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttttta 550  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |    
T  38317096 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agttttttagagaatgataaactaatacttatgattaatatacttttaa 38317194  T
Q  551 tttt 554  Q
    ||||    
T  38317195 tttt 38317198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 632 - 823
Target Start/End: Original strand, 6667720 - 6667911
Alignment:
Q  632 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 731  Q
    |||||||||||||||||||||||||||||| |||||||| || |||| |||||||||| |||||||||| ||||||  |||||||||||||||||||||     
T  6667720 ctgaggcgtgacatagtcactgttcttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataacc 6667819  T
Q  732 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtat--gagaaaataattatgtgta 823  Q
    | |||| ||||||||||||||||  |||||  ||||| | ||||||||||||||  || ||| ||| ||| ||  |||||||||| ||||||||    
T  6667820 ggaggtgacagaacagctcaaatatatctc--agatatcaggagatgtaacccatgaattcaatatattggatgagagaaaataagtatgtgta 6667911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 406 - 556
Target Start/End: Complemental strand, 16535950 - 16535801
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 504  Q
    ||||||||||| |||||| ||||| ||||||||| | ||||| |  |||||||||||||||||||||||||||||||||||||||||||||||| |  ||    
T  16535950 tttgtttgggagtttggatgggaagggaggggagggctttggggtattggaaatatatagaaaaatggacaaaaaattcacattttttgaaagagc-tat 16535852  T
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttattttta 556  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||| |||||    
T  16535851 tttttagagaatgataaactaatacttataattaatat-ctttttaatttta 16535801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 400 - 548
Target Start/End: Original strand, 32948342 - 32948491
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||| |||||||| |  |||||||||||| ||||| ||| ||||||| || ||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32948342 ttaggttttgtttgagtgtttggaggggaagggaggagagagttttggggggttgaaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 32948441  T
Q  499 acaaattttttagagaatg-ataaactaatacttatgattaatatactttt 548  Q
    || | |||||||||||||| |||| ||||||||||||||||||||||||||    
T  32948442 ac-agttttttagagaatgaataatctaatacttatgattaatatactttt 32948491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 7182009 - 7182161
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgtttt-----ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||| |||||||||||| ||||||||| ||| |     || ||||  |||||||||||||||||||||||||||||||||||||||||||||     
T  7182009 tttgtttgggagtttggaggggaagggaggggagggttatatatggggggttaaaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa- 7182107  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
       ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  7182108 tggttttttagagaatgataaactaatacttatgattaatatacttttaatttt 7182161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 37756537 - 37756693
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggag-----gttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa 496  Q
    ||||||||||||| | |||||||||||| ||||||||| | ||||| |     |||||||||||||| ||||||||||||||||||||  ||||||||||    
T  37756537 aggctttgtttggaagtttggaggggaagggaggggagggctttggggtggtggttggaaatatatacaaaaatggacaaaaaattcaatttttttgaaa 37756636  T
Q  497 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||  || |||||||||||||||||||||||||||||||||||||||||| |||||    
T  37756637 gaacag-ttctttagagaatgataaactaatacttatgattaatatacttttaatttt 37756693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 41363630 - 41363782
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    |||||||||||| || |||||||| ||| ||||||||| | ||||| || ||  |||||||||||||||| || ||||||||||||||||||||||||||    
T  41363630 aggctttgtttgagagtttggaggcgaagggaggggagggctttggggggttaaaaatatatagaaaaattgataaaaaattcacattttttgaaagaac 41363729  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |  ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  41363730 ag-ttttttacagaatgataaactaatacttatgattaatatacttttaatttt 41363782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 554
Target Start/End: Original strand, 49404489 - 49404593
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||||||||||| ||||||||||||||||||||||    
T  49404489 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaaaac-agttttttagagaatgataaactattacttatgattaatatactttt 49404587  T
Q  549 tatttt 554  Q
     |||||    
T  49404588 aatttt 49404593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 407 - 542
Target Start/End: Complemental strand, 13270241 - 13270106
Alignment:
Q  407 ttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaatt 505  Q
    |||||||||| ||||||||| || ||||| ||| | ||||| || |||||||||||||||||||||||||||||||||| ||||||| ||||||| | ||    
T  13270241 ttgtttgggagtttggagggaaagggaggagagggctttggggggttggaaatatatagaaaaatggacaaaaaattcatatttttttaaagaac-agtt 13270143  T
Q  506 ttttagagaatgataaactaatacttatgattaatat 542  Q
    |||||||||||||||||||||||||||||||||||||    
T  13270142 ttttagagaatgataaactaatacttatgattaatat 13270106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 455 - 554
Target Start/End: Complemental strand, 47670019 - 47669921
Alignment:
Q  455 aaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||| ||||| |||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  47670019 aaatatatagtaaaattgacaaaaaattcacattttttgaaagaataaattttt-agagaatgataaactaatacttatgattaatatacttttaatttt 47669921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 5e-34
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 31530288 - 31530130
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattt----tttga 494  Q
    |||||||||||||| || |||||||||||| ||||||||| | ||||| || ||  ||||||||||||||||||||||||||||||  |||    |||||    
T  31530288 ttaggctttgtttgagagtttggaggggaagggaggggagggctttggggggttaaaaatatatagaaaaatggacaaaaaattcattttttttgtttga 31530189  T
Q  495 aagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||| | ||||||||||||||||||| ||||||||||||||||||||||||| |||||    
T  31530188 aagaac-agttttttagagaatgataaattaatacttatgattaatatacttttaatttt 31530130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 72; E-Value: 3e-32
Query Start/End: Original strand, 623 - 802
Target Start/End: Original strand, 13010525 - 13010703
Alignment:
Q  623 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 722  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| ||| |||||||||||||  ||| |||||| ||    
T  13010525 ttatataacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcctaggatataacagttcttctccgttacga 13010624  T
Q  723 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgt 802  Q
    |||||||| | | || |||||||| |||||||  |||||| ||||| | | |||||||||||| ||||||| ||||||||    
T  13010625 atcataac-ggatgtgacagaacaactcaaatatatctcagagatatcagaagatgtaacccaaaaactcaatattttgt 13010703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 406 - 528
Target Start/End: Original strand, 21295940 - 21296062
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttgg-aggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaa 503  Q
    ||||||||||| |||||||||||| |||||  || ||||||| |||||||||||||||||||||||||| |||||| || |||||||||||||||||  |    
T  21295940 tttgtttgggagtttggaggggaagggaggttagggttttgggaggttggaaatatatagaaaaatggataaaaaattttacattttttgaaagaac--a 21296037  T
Q  504 ttttttagagaatgataaactaata 528  Q
    |||||||||||||||||||||||||    
T  21296038 ttttttagagaatgataaactaata 21296062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 475 - 554
Target Start/End: Complemental strand, 23708325 - 23708247
Alignment:
Q  475 aaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  23708325 aaaaaattcacattttttgaaagaacaa-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 23708247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 68; E-Value: 7e-30
Query Start/End: Original strand, 471 - 554
Target Start/End: Original strand, 48830702 - 48830784
Alignment:
Q  471 ggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  48830702 ggacaaaaaattcacattttttgaaagaacag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 48830784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 2e-27
Query Start/End: Original strand, 405 - 531
Target Start/End: Complemental strand, 50643083 - 50642953
Alignment:
Q  405 ctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-----ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaa 499  Q
    |||||||||||| |||||||||||| ||| ||||| | ||||| ||     ||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  50643083 ctttgtttgggagtttggaggggaagggatgggagggctttggggggtttgttggaaatatataaaaaaatagacaaaaaattcacattttttgaaagaa 50642984  T
Q  500 caaattttttagagaatgataaactaatactt 531  Q
    | | ||||||||| ||||||||||||||||||    
T  50642983 c-agttttttagaaaatgataaactaatactt 50642953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 449 - 554
Target Start/End: Complemental strand, 22558991 - 22558888
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||||||||||||||||| |||||||||| ||||||| ||||||| | ||| ||| |||| ||||||||||||||||||||||||||||||||    
T  22558991 ggttggaaatatatagaaaaatggataaaaaattcatatttttt-aaagaac-agtttcttaaagaacgataaactaatacttatgattaatatactttt 22558894  T
Q  549 tatttt 554  Q
     |||||    
T  22558893 aatttt 22558888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 61; E-Value: 1e-25
Query Start/End: Original strand, 400 - 554
Target Start/End: Original strand, 52594437 - 52594596
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatg----gacaaaaaa--ttcacattttttg 493  Q
    |||| |||||||||||| |||| |||||||||| ||||||   ||| ||||||| ||||||||| |||||      |||||||||  |||| ||||||||    
T  52594437 ttagactttgtttgggagtttgaaggggaaagggggggaggactttcgaggttgaaaatatataaaaaaaaaaaaagacaaaaaaaattcatattttttg 52594536  T
Q  494 aaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||  ||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  52594537 aaagaacag-tttcttagagaatgataaactaatacttatgattaatatacttttaatttt 52594596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 443 - 553
Target Start/End: Original strand, 21730185 - 21730296
Alignment:
Q  443 tttggaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaa-gaacaaattttttagagaatgataaactaatacttatgattaat 540  Q
    |||||| |||||||||||||||||||||| | |||||| ||||| |||||| ||| |||||  |||||||||||||||||||||||||||||||||||||    
T  21730185 tttggaagttggaaatatatagaaaaatgaataaaaaaattcacttttttttaaaagaacag-ttttttagagaatgataaactaatacttatgattaat 21730283  T
Q  541 atactttttattt 553  Q
    ||| |||| ||||    
T  21730284 atatttttaattt 21730296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 632 - 785
Target Start/End: Original strand, 6671392 - 6671537
Alignment:
Q  632 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 731  Q
    |||||||||||||||||||| || |||||| |||||||| || ||      ||||||| |||||||||| ||||||  |||||||||||||||||||||     
T  6671392 ctgaggcgtgacatagtcaccgtccttgaggattttatccgcctc------gcatatcctcccaggatacaacagttcttccccgttatgaatcataacc 6671485  T
Q  732 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaaccca 785  Q
    | |||| ||||||||||||||||  |||||  ||||| | ||||||||||||||    
T  6671486 ggaggtgacagaacagctcaaatatatctc--agatatcaggagatgtaaccca 6671537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 612 - 689
Target Start/End: Original strand, 20058084 - 20058161
Alignment:
Q  612 aacacactatgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatc 689  Q
    |||||||  |||||||||| ||||||||||||||||||||||| |||||| |||||||| || |||||||||| ||||    
T  20058084 aacacacactgttatgtaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcattagcgcgtatc 20058161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 621 - 730
Target Start/End: Complemental strand, 44643579 - 44643471
Alignment:
Q  621 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 720  Q
    ||||| |||| ||||||||||||||||||||||| ||| ||| || |||| || |||| |||||||||| ||| |||||| ||||||  ||||||| |||    
T  44643579 tgttaagtaacctgaggcgtgacatagtcactgtccttcaga-ttctatccgcctcataagcgcatatcctcctaggatacaacagttcttccccgatat 44643481  T
Q  721 gaatcataac 730  Q
    ||||||||||    
T  44643480 gaatcataac 44643471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 621 - 728
Target Start/End: Complemental strand, 895570 - 895463
Alignment:
Q  621 tgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttat 720  Q
    |||||| ||| ||||| ||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||||||| || |||  |||||   |||    
T  895570 tgttatctaacctgagtcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaaaagttcttccctaatat 895471  T
Q  721 gaatcata 728  Q
    ||||||||    
T  895470 gaatcata 895463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000009
Query Start/End: Original strand, 561 - 609
Target Start/End: Complemental strand, 44643660 - 44643612
Alignment:
Q  561 aacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 609  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||    
T  44643660 aacttatcgaatttggttgccgacaaagctccatcaaaatcttcacaaa 44643612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 449 - 542
Target Start/End: Original strand, 24662613 - 24662705
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatat 542  Q
    |||||||||||||||| |||||||  |||   |||||||||| |||||||  || |||||||||||||||||||  ||| ||||||||||||||    
T  24662613 ggttggaaatatataggaaaatggtaaaatctttcacattttctgaaagagtaa-ttttttagagaatgataaatcaatgcttatgattaatat 24662705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 406 - 490
Target Start/End: Complemental strand, 54806711 - 54806626
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacatttt 490  Q
    ||||||||||| |||||||| ||| |||||||||   |||||||| ||  |||||||||||||||||||  |||||||||||||||    
T  54806711 tttgtttgggagtttggaggagaagggaggggaggactttggagggttaaaaatatatagaaaaatggatcaaaaattcacatttt 54806626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 398 - 450
Target Start/End: Original strand, 22845046 - 22845098
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg 450  Q
    ||||||||||||||||||| |||||||||||| ||||||||| | ||||||||    
T  22845046 acttaggctttgtttgggagtttggaggggaagggaggggagggctttggagg 22845098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 504 - 548
Target Start/End: Original strand, 38957465 - 38957509
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    |||| ||||||||||||||||||||||||||||||||||| ||||    
T  38957465 ttttgtagagaatgataaactaatacttatgattaatatattttt 38957509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 431 - 554
Target Start/End: Complemental strand, 31341001 - 31340878
Alignment:
Q  431 ggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatact 530  Q
    |||||| || ||||||| ||| |||||||||| || |||| || ||    |||||||| |||||||||  |  ||||||||||||||||||| ||  |||    
T  31341001 ggagggaagggttttgggggtgggaaatatatggataaattgagaagtctttcacattatttgaaagagtattttttttagagaatgataaattagaact 31340902  T
Q  531 tatgattaatatactttttatttt 554  Q
    ||| ||||||||| ||||||||||    
T  31340901 tataattaatatattttttatttt 31340878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 486 - 553
Target Start/End: Original strand, 52671200 - 52671267
Alignment:
Q  486 attttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 553  Q
    ||||||||||||  ||| ||||||| |||||||||||||||| | ||||||||||||| |||| ||||    
T  52671200 attttttgaaagtgcaatttttttatagaatgataaactaatgcgtatgattaatataattttaattt 52671267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 487 - 554
Target Start/End: Complemental strand, 53013764 - 53013698
Alignment:
Q  487 ttttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||| ||||| ||||||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  53013764 ttttttgaaaaaacaa-ttttttagagaatgataaattaatgtttatgattaatatatttttaatttt 53013698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 7182404 - 7182354
Alignment:
Q  398 acttaggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    ||||||||||||||||||| |||||||||||  ||||||||| ||||||||    
T  7182404 acttaggctttgtttgggagtttggaggggaggggaggggagggttttgga 7182354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 48417531 - 48417581
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||| ||||||| |||| |||||||| |||||||||||||||||    
T  48417531 ttttttagagagtgataaattaatgcttatgatcaatatactttttatttt 48417581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 49936663 - 49936613
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| |||| ||||||||||||||| |||| |||||    
T  49936663 ttttttagagaatgataaattaatgcttatgattaatatatttttaatttt 49936613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 504 - 554
Target Start/End: Complemental strand, 51431105 - 51431055
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| ||||| |||||||||||||| |||| |||||    
T  51431105 ttttttagagaatgataaagtaatatttatgattaatatatttttaatttt 51431055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 550
Target Start/End: Original strand, 8828108 - 8828176
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatacttttta 550  Q
    ||||||||||| ||| || ||| ||||||||||||||||||| ||||  |||||||||||||| ||||||    
T  8828108 ttcacatttttcgaatgagcaa-ttttttagagaatgataaattaatgtttatgattaatatatttttta 8828176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 441 - 557
Target Start/End: Original strand, 15451194 - 15451310
Alignment:
Q  441 gttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaa 539  Q
    |||||||||| || ||||||||  |||||||||  |||   ||||||||||||||||||  || ||||||| | ||||||||| |||| |||||||||||    
T  15451194 gttttggagggttagaaatatagtgaaaaatggtaaaatctttcacattttttgaaagagtaa-ttttttaaataatgataaattaatgcttatgattaa 15451292  T
Q  540 tatactttttatttttag 557  Q
    |||| || | ||||||||    
T  15451293 tatatttctaatttttag 15451310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 40422970 - 40423043
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||| |||||||||||  |  ||||||||||| ||||||| ||||| |||||||||||||| |||| |||||    
T  40422970 ttcacaatttttgaaagagtattttttttagagagtgataaattaatatttatgattaatatatttttaatttt 40423043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 46669842 - 46669915
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||| |||||  |  ||||||||||||||||||| | || ||||||||||||||| |||| |||||    
T  46669842 ttcacatttttttaaagagtattttttttagagaatgataaatttatgcttatgattaatatatttttaatttt 46669915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 54806344 - 54806393
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    |||||||||||||||||| ||||||| |||| ||||||||| ||||||||    
T  54806344 cttaggctttgtttgggagtttggagaggaagggaggggagggttttgga 54806393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 515 - 556
Target Start/End: Complemental strand, 54806621 - 54806580
Alignment:
Q  515 atgataaactaatacttatgattaatatactttttattttta 556  Q
    |||||||||||||||||||||||||||| ||||||| |||||    
T  54806621 atgataaactaatacttatgattaatatgctttttaatttta 54806580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 443 - 527
Target Start/End: Complemental strand, 50640339 - 50640256
Alignment:
Q  443 tttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaat 527  Q
    ||||| |||||||||||| |||||||||| | |||   ||| ||||||| |||||||| ||||||| ||||||||||||| ||||    
T  50640339 tttgggggttggaaatatgtagaaaaatgaaaaaatctttctcatttttcgaaagaac-aatttttaagagaatgataaattaat 50640256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 554
Target Start/End: Original strand, 4441914 - 4441993
Alignment:
Q  475 aaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||| ||||||||||| |||||  |   |||||||||| ||||||| |||| ||||||||||||||| |||| |||||    
T  4441914 aaaaaaatcacattttttaaaagagtattatttttagagagtgataaattaatgcttatgattaatatatttttaatttt 4441993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 552
Target Start/End: Complemental strand, 9021117 - 9021047
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatt 552  Q
    |||||||||||| |||||  || |||||||||| |||||||| |||| |||||| |||||||| ||||||||    
T  9021117 ttcacattttttaaaagattaa-ttttttagagtatgataaattaatgcttatggttaatatattttttatt 9021047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 749 - 808
Target Start/End: Original strand, 20058180 - 20058239
Alignment:
Q  749 tcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtatgaga 808  Q
    ||||| |||||  |||||||||||||||||||||| ||||||||| || |||| ||||||    
T  20058180 tcaaaataatcataaagataaccggagatgtaacctagaaactcaataatttggatgaga 20058239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 399 - 450
Target Start/End: Original strand, 21357977 - 21358028
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg 450  Q
    |||||||| |||||| || |||||||||||| ||||||||| ||||||||||    
T  21357977 cttaggctctgtttgagagtttggaggggaagggaggggagggttttggagg 21358028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 448
Target Start/End: Original strand, 31340658 - 31340705
Alignment:
Q  401 taggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    |||||||||||||||| |||||||||||| ||| ||||| ||||||||    
T  31340658 taggctttgtttgggagtttggaggggaagggatgggagggttttgga 31340705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 481 - 548
Target Start/End: Original strand, 46176835 - 46176901
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||||||||||  |  ||||||||||||||||||||||||  |||||||| ||||| ||||    
T  46176835 ttcacattttttgaaagagtat-ttttttagagaatgataaactaatggttatgattcatatattttt 46176901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 27485160 - 27485233
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||| |||||  || | ||||||| |||||||||  ||| ||||||||||||||| |||| |||||    
T  27485160 ttcacatttttttaaagagtaattattttagaaaatgataaatgaatgcttatgattaatatatttttaatttt 27485233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0636 (Bit Score: 102; Significance: 3e-50; HSPs: 1)
Name: scaffold0636
Description:

Target: scaffold0636; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 8654 - 8502
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttg-gaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||  ||||||||||||  |||||||| | |||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  8654 aggctttgtttgggggtttggaggggaagagaggggagggctttgaggggttggaaatatatacaaaaatggacaaaaaattcacattttttgaaagaac 8555  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     ||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  8554 -aattttttagagaatgataaactaatacttatgattaatatacttttaatttt 8502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0717 (Bit Score: 98; Significance: 9e-48; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 98; E-Value: 9e-48
Query Start/End: Original strand, 399 - 554
Target Start/End: Complemental strand, 1845 - 1689
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaa 496  Q
    ||||||||||||||| || |||||||||||| ||||||||| | ||||| || ||||||||||||||||||| |||||||||| ||||||||||||||||    
T  1845 cttaggctttgtttgagagtttggaggggaagggaggggagggctttggggggttggaaatatatagaaaaaaggacaaaaaaattcacattttttgaaa 1746  T
Q  497 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||| |||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  1745 gaacaa-ttttttagagaatgataaactaatacttatgattaatatatttttaatttt 1689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 94; Significance: 2e-45; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 632 - 808
Target Start/End: Original strand, 1788900 - 1789077
Alignment:
Q  632 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 731  Q
    ||||||||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||||||| ||||||  |||||||||||||||||||||     
T  1788900 ctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttatgaatcataacc 1788999  T
Q  732 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaa-ctcagtattttgtatgaga 808  Q
    | |||| |||||||| |||||||| |||||||||||| |  ||||||||||||||||| |||| ||||||| ||||||    
T  1789000 ggaggtgacagaacaactcaaatttatctcaaagatatcatgagatgtaacccagaaacctcaatattttggatgaga 1789077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 34148398 - 34148549
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggac-aaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| |||||||||||| ||||||||| ||||||| ||||||||||||| |||||||||||| |||||| ||||||||||||||||||     
T  34148398 aggctttgtttgggagtttggaggggaagggaggggagggttttgggggttggaaatataaagaaaaatggacaaaaaaaatcacattttttgaaagaa- 34148496  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     | ||||||||||||||||||||||| ||||||||||||||||||||| |||||    
T  34148497 tagttttttagagaatgataaactaa-acttatgattaatatacttttaatttt 34148549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 402 - 554
Target Start/End: Complemental strand, 36906452 - 36906298
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttgg-aggttggaaatatatagaaaaatggacaaaaaat--tcacattttttgaaaga 498  Q
    ||||||||||||||| |||||||||||| ||||||||| | ||||| |||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  36906452 aggctttgtttgggagtttggaggggaagggaggggagggctttgggaggttggaaatatatagaaaaatggacaaaaaaaaatcacattttttgaaaga 36906353  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||   ||||| ||||||||||||||||||||||||||||||||||||||| |||||    
T  36906352 acgg-tttttcagagaatgataaactaatacttatgattaatatacttttaatttt 36906298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 93; E-Value: 8e-45
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 37659351 - 37659501
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 501  Q
    |||||||||||| ||||||||||||||| ||||||||| | ||||| |||||||||||||||||||||| | |||||| |||||| ||||||||| ||||    
T  37659351 aggctttgtttgagaatttggaggggaagggaggggagggctttgg-ggttggaaatatatagaaaaataggcaaaaagttcacaatttttgaaataaca 37659449  T
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
      ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  37659450 g-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 37659501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 33230864 - 33231017
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggag-gttggaaatatatagaaaaa-tggacaaaaaattcacattttttgaaagaa 499  Q
    ||||||||||||||| |||||||||||| ||||| ||| | ||||| | |||||||||||||| ||||| |||| |||||||||||||||||||||||||    
T  33230864 aggctttgtttgggagtttggaggggaagggaggagagggctttggggagttggaaatatataaaaaaaatggataaaaaattcacattttttgaaagaa 33230963  T
Q  500 caaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  33230964 cag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 33231017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 406 - 554
Target Start/End: Original strand, 4734318 - 4734466
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgtttt-ggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaat 504  Q
    ||||||||||| |||||||||||| |||| | |   |||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||| | |    
T  4734318 tttgtttgggagtttggaggggaagggagtgaatgattttagggggttggaaatatagagaaaaatggacaaaaaattcacattttttgaaagaac-agt 4734416  T
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||    
T  4734417 tttttagagaatgataaactaatacttatgattaatatacttttaatttt 4734466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 402 - 554
Target Start/End: Original strand, 36102708 - 36102860
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac 500  Q
    ||||||||||||||| ||  ||||||||  |||||||| ||||||| || ||| |||||||||||||||||||||||||||||||||||||| ||| |||    
T  36102708 aggctttgtttgggagttaagaggggaagagaggggagggttttggggggttgaaaatatatagaaaaatggacaaaaaattcacatttttttaaaaaac 36102807  T
Q  501 aaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  36102808 ag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 36102860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 400 - 554
Target Start/End: Original strand, 1941866 - 1942023
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||||||||||||||| |||||||||||| |||||||||   |||||||| || ||||| |||||||||||||||||||||||||||||| ||||||||    
T  1941866 ttaggctttgtttgggagtttggaggggaagggaggggaggactttggagggtttgaaatttatagaaaaatggacaaaaaattcacatttgttgaaaga 1941965  T
Q  499 acaaattttttagagaatgataaac---taatacttatgattaatatactttttatttt 554  Q
    || | ||||||||||||||||||||   ||||||||||||||||||||||||| |||||    
T  1941966 ac-agttttttagagaatgataaactaataatacttatgattaatatacttttaatttt 1942023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 623 - 831
Target Start/End: Complemental strand, 17028480 - 17028270
Alignment:
Q  623 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 722  Q
    |||||||| ||||||||||||| ||||||||| |||||| |||||||| || ||||||||||||||| ||||||||||| |||||  |||||||||||||    
T  17028480 ttatgtaacctgaggcgtgacacagtcactgtccttgaggattttatccgcctcattagcgcatatcctcccaggatatgacagttcttccccgttatga 17028381  T
Q  723 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagt-attttgtat--gagaaaataattatg 819  Q
    |||||||| | |||| ||| ||||||||||||  ||  || ||||| | |||||||||||| ||||||||| | |||||| ||  |||||||||||||||    
T  17028380 atcataaccggaggtgacacaacagctcaaatatat-acacagatatcaggagatgtaacctagaaactcaataattttggatgagagaaaataattatg 17028282  T
Q  820 tgtataaagaaa 831  Q
    |||| |||||||    
T  17028281 tgtaaaaagaaa 17028270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 89; E-Value: 2e-42
Query Start/End: Original strand, 623 - 831
Target Start/End: Complemental strand, 17558916 - 17558706
Alignment:
Q  623 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 722  Q
    |||||||| ||||||||||||| ||||||||| |||||| |||||||| || ||||||||||||||| ||||||||||| |||||  |||||||||||||    
T  17558916 ttatgtaacctgaggcgtgacacagtcactgtccttgaggattttatccgcctcattagcgcatatcctcccaggatatgacagttcttccccgttatga 17558817  T
Q  723 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagt-attttgtat--gagaaaataattatg 819  Q
    |||||||| | |||| ||| ||||||||||||  ||  || ||||| | |||||||||||| ||||||||| | |||||| ||  |||||||||||||||    
T  17558816 atcataaccggaggtgacacaacagctcaaatatat-acacagatatcaggagatgtaacctagaaactcaataattttggatgagagaaaataattatg 17558718  T
Q  820 tgtataaagaaa 831  Q
    |||| |||||||    
T  17558717 tgtaaaaagaaa 17558706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 88; E-Value: 8e-42
Query Start/End: Original strand, 400 - 554
Target Start/End: Complemental strand, 25033645 - 25033491
Alignment:
Q  400 ttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaaga 498  Q
    ||||| ||||||||||| |||||||||||| ||||||||| |  |||  || || ||||||||||||||||||||||||||||||||||||||| |||||    
T  25033645 ttaggttttgtttgggagtttggaggggaagggaggggagggcattgtgggattagaaatatatagaaaaatggacaaaaaattcacattttttcaaaga 25033546  T
Q  499 acaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    || | ||||||||| ||||||||||||||||||||||||||||||||||| |||||    
T  25033545 ac-agttttttagataatgataaactaatacttatgattaatatacttttaatttt 25033491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 85; E-Value: 5e-40
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 13864907 - 13865062
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaag 497  Q
    |||||||||||||||  | |||||| ||||||||||||||| | ||| |||| ||||||||||||||| ||||| | |||||||||||||||||||||||    
T  13864907 cttaggctttgtttgaaagtttggatgggaaaggaggggagggctttagagggttggaaatatatagataaatgaataaaaaattcacattttttgaaag 13865006  T
Q  498 aacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||| | ||||||||| ||||||||| ||||||||||||||||||||||||| |||||    
T  13865007 aac-agttttttagaaaatgataaattaatacttatgattaatatacttttaatttt 13865062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 83; E-Value: 8e-39
Query Start/End: Original strand, 410 - 554
Target Start/End: Original strand, 3404399 - 3404544
Alignment:
Q  410 tttgggaatttggaggggaaaggaggggagtgttttg-gaggttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaagaacaaatttt 507  Q
    ||||||| |||||||||||| |||||||||   |||| | |||||||||||||||||||||| || |||||| |||||||||||||||||||||  ||||    
T  3404399 tttgggagtttggaggggaagggaggggaggactttgaggggttggaaatatatagaaaaatagataaaaaaattcacattttttgaaagaacag-tttt 3404497  T
Q  508 ttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  3404498 ttagagaatgataaactaatacttatgattaatatacttttaatttt 3404544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 606 - 799
Target Start/End: Original strand, 39655676 - 39655869
Alignment:
Q  606 caaaacaacacactatgttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataaca 705  Q
    ||||||||||||||  |||| |||| ||||||||||||||||||||||| |||||| |||||||| || |||| || ||||||| ||||| |||| ||||    
T  39655676 caaaacaacacact--gttaagtaacctgaggcgtgacatagtcactgtccttgaggattttatccgcctcataagtgcatatcctcccatgatacaaca 39655773  T
Q  706 gtcattccccgttatgaatcataactgaaggttacagaacagctcaaattaatctcaaagataa-ccggagatgtaaccc-agaaactcagtattt 799  Q
    ||  ||| ||||||||||||||||| | | || ||||||||||||||||| |||||||||||||   ||||||||||||| ||||||||| |||||    
T  39655774 gttcttctccgttatgaatcataaccggatgtgacagaacagctcaaatttatctcaaagataagttggagatgtaacccaagaaactcaatattt 39655869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 406 - 554
Target Start/End: Complemental strand, 34349974 - 34349826
Alignment:
Q  406 tttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaa-gaacaaa 503  Q
    ||||||||||| |||||||||||| | ||||||  | |||||||| |||||||||||||||||| | ||||||||||||||||||||| ||| |||||      
T  34349974 tttgtttgggagtttggaggggaaggaaggggaaggctttggagggttggaaatatatagaaaa-tagacaaaaaattcacatttttttaaaagaacag- 34349877  T
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  34349876 ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 34349826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 418 - 554
Target Start/End: Complemental strand, 34272762 - 34272626
Alignment:
Q  418 tttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaat 516  Q
    ||||||||| || ||||||||| | ||||| || |||||||||||||||||||||| ||||||||||| ||||||||||| ||||  ||||||||| |||    
T  34272762 tttggagggaaagggaggggagggctttggggggttggaaatatatagaaaaatgggcaaaaaattcaaattttttgaaaaaacag-ttttttagaaaat 34272664  T
Q  517 gataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||||||||||||||||||||||| |||||    
T  34272663 gataaactaatacttatgattaatatacttttaatttt 34272626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 623 - 858
Target Start/End: Complemental strand, 38678809 - 38678575
Alignment:
Q  623 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 722  Q
    |||| ||| ||||||||||||||||||| |||  ||||| |||| ||| |  |||| |||||||||| |  ||||||| ||||||  |||||||||||||    
T  38678809 ttatataacctgaggcgtgacatagtca-tgtctttgaggatttgatccgtctcataagcgcatatccttacaggatacaacagt--ttccccgttatga 38678713  T
Q  723 atcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaactcagtattttgtat--gagaaaataattatgt 820  Q
    |||||||  | |||| |||||||| |||||||| |||| |||||||||  |||||| || ||||||| ||| ||||||| ||  ||||||||||||||||    
T  38678712 atcataatcggaggtgacagaacaactcaaatttatcttaaagataacaagagatgcaa-ccagaaattcaatattttggatgagagaaaataattatgt 38678614  T
Q  821 gtataaagaaatat-aaatgagagagcatatatgtgtat 858  Q
    | |||||||||||| ||||||||||| || | |||||||    
T  38678613 gcataaagaaatatgaaatgagagagtatttgtgtgtat 38678575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 458 - 554
Target Start/End: Complemental strand, 7392 - 7296
Alignment:
Q  458 tatatagaaaaatggacaaaaaattcacatttttt-gaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||  || ||||||||||||||||||||||||||| |||||||||||||| |||||    
T  7392 tatatagaaaaatagacaaaaaattcacatttttttgaaagaacag-ttatttagagaatgataaactaatacttataattaatatacttttaatttt 7296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 62; E-Value: 3e-26
Query Start/End: Original strand, 449 - 554
Target Start/End: Original strand, 2474633 - 2474737
Alignment:
Q  449 ggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||| ||||||||||||||||||| ||||||||  |||||||||||| ||||  ||||||||| ||||||||||||||||||||| |||||||||||||    
T  2474633 ggttgaaaatatatagaaaaatggataaaaaatttgcattttttgaaaaaacag-ttttttagataatgataaactaatacttatggttaatatactttt 2474731  T
Q  549 tatttt 554  Q
     |||||    
T  2474732 aatttt 2474737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 683 - 858
Target Start/End: Complemental strand, 38676373 - 38676196
Alignment:
Q  683 gcatatcatcccaggatataacagtcattccccgttatgaatcataactgaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaac 782  Q
    ||||||| |||||||||| |||| |  ||||||||||||||||||||  | |||| |||||||| |||||||| || | ||||||||| ||||||  ||     
T  38676373 gcatatcctcccaggatacaacaattcttccccgttatgaatcataatcggaggtgacagaacaactcaaatttattttaaagataacaggagatacaa- 38676275  T
Q  783 ccagaaactcagtattttgtat--gagaaaataattatgtgtataaagaaatat-aaatgagagagcatatatgtgtat 858  Q
    ||||||||||| ||||||| ||  |||||||||||||||||||||| ||||||| || |||||||| || | |||||||    
T  38676274 ccagaaactcaatattttggatgagagaaaataattatgtgtataacgaaatatgaagtgagagagtatttgtgtgtat 38676196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 56; E-Value: 1e-22
Query Start/End: Original strand, 632 - 747
Target Start/End: Original strand, 21185322 - 21185437
Alignment:
Q  632 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 731  Q
    |||| |||||||||||||||||| |||||| |||||||| || |||| |||||||||| |||||| |||||| |||  |||||||||||||||||||||     
T  21185322 ctgaagcgtgacatagtcactgtccttgaggattttatccgcctcataagcgcatatcctcccagcatataatagttcttccccgttatgaatcataacc 21185421  T
Q  732 gaaggttacagaacag 747  Q
    | |||| ||| |||||    
T  21185422 ggaggtgacaaaacag 21185437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 54; E-Value: 2e-21
Query Start/End: Original strand, 663 - 808
Target Start/End: Complemental strand, 21347197 - 21347052
Alignment:
Q  663 attttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataactgaaggttacagaacagctcaaattaatctca 762  Q
    |||||||| || |||| ||| |||||| ||||| |||| ||| ||  || | ||||||||||||||| ||||||| || ||||| || ||| ||||||||    
T  21347197 attttatccgcctcataagcacatatcctcccaagatacaactgttctttcacgttatgaatcataaatgaaggtgacggaacaactgaaaataatctca 21347098  T
Q  763 aagataaccggagatgtaacccagaaactcagtattttgtatgaga 808  Q
    |||| |||||||||||||||||| ||||||| || |||| ||||||    
T  21347097 aagacaaccggagatgtaacccacaaactcaatactttggatgaga 21347052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 556 - 609
Target Start/End: Original strand, 39655601 - 39655654
Alignment:
Q  556 agtgaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 609  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  39655601 agtgaaacttatcgaatttgattgccgacacagctccatcaaaatcttcacaaa 39655654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 481 - 546
Target Start/End: Original strand, 15108162 - 15108226
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactt 546  Q
    |||| |||||||||||||| || ||||||||||||||||||| ||| |||||||||||||||||||    
T  15108162 ttcatattttttgaaagaataa-ttttttagagaatgataaattaacacttatgattaatatactt 15108226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 448 - 542
Target Start/End: Original strand, 6839664 - 6839756
Alignment:
Q  448 aggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatat 542  Q
    |||| |||||||| ||||||||| || |||   |||| | |||| ||||||||||  ||||||||||||||||||||||||||||| ||||||||    
T  6839664 aggtgggaaatatgtagaaaaatagagaaatctttcatacttttcgaaagaacaa--tttttagagaatgataaactaatacttattattaatat 6839756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 559 - 614
Target Start/End: Complemental strand, 31183906 - 31183851
Alignment:
Q  559 gaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaaacaac 614  Q
    |||||||||||||||||||||  |||||||||||||||||||||||| ||| ||||    
T  31183906 gaaacttatcgaatttggttgtagacacagctccatcaaaatcttcataaatcaac 31183851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 31297268 - 31297318
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||||||| |||||||||||| ||||||||||||||||||| |||||    
T  31297268 ttttttagagaacgataaactaatatttatgattaatatacttttaatttt 31297318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 405 - 530
Target Start/End: Original strand, 43732936 - 43733060
Alignment:
Q  405 ctttgtttgggaatttggaggggaaaggaggggagtgttttggaggttg-gaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaa 503  Q
    |||||||||||| ||||| |||||  ||| ||||| |||||||||| || ||| | |||||| ||||||| |||   ||||||||||||| |||| |||     
T  43732936 ctttgtttgggagtttgg-ggggaggggaagggagggttttggagggtgagaattgtatagagaaatggagaaatctttcacattttttggaagagcaa- 43733033  T
Q  504 ttttttagagaatgataaactaatact 530  Q
    ||||||||| |||||||||||||||||    
T  43733034 ttttttagataatgataaactaatact 43733060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 447 - 492
Target Start/End: Original strand, 31297227 - 31297272
Alignment:
Q  447 gaggttggaaatatatagaaaaatggacaaaaaattcacatttttt 492  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||    
T  31297227 gaggttagaaatatatagaaaaatggacaaaacattcacatttttt 31297272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000008
Query Start/End: Original strand, 483 - 554
Target Start/End: Complemental strand, 3394142 - 3394072
Alignment:
Q  483 cacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||  || ||||| ||||||||||||| ||||  |||||||||||||| ||||||||||    
T  3394142 cacattttttgaaagagtaa-tttttaagagaatgataaattaatgtttatgattaatatattttttatttt 3394072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 559 - 609
Target Start/End: Complemental strand, 21347313 - 21347263
Alignment:
Q  559 gaaacttatcgaatttggttggcgacacagctccatcaaaatcttcacaaa 609  Q
    |||| ||||| |||||||||| ||||||||||| |||||||||||||||||    
T  21347313 gaaatttatcaaatttggttgtcgacacagctctatcaaaatcttcacaaa 21347263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 633 - 699
Target Start/End: Complemental strand, 31183816 - 31183750
Alignment:
Q  633 tgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggat 699  Q
    |||||||||||||| |||||||| ||||| ||||||||  | ||||||||||||||| ||| |||||    
T  31183816 tgaggcgtgacataatcactgttattgagtattttatccacctcattagcgcatatcctccaaggat 31183750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 481 - 551
Target Start/End: Complemental strand, 37388462 - 37388393
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttat 551  Q
    ||||||||||||||||||  |||||||| ||||||||||||| |||   |||||||||||||| |||||||    
T  37388462 ttcacattttttgaaagagtaaattttt-agagaatgataaattaaagtttatgattaatatattttttat 37388393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 554
Target Start/End: Complemental strand, 13258669 - 13258597
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||  |  ||||||||||||||||||| |||| |||| |||||||||| |||| |||||    
T  13258669 ttcacattttttgaaagagtat-ttttttagagaatgataaattaatgcttacgattaatatatttttaatttt 13258597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 504 - 548
Target Start/End: Original strand, 11876934 - 11876978
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||| ||||||| |||||||||||||||||||| ||||    
T  11876934 ttttttagagagtgataaattaatacttatgattaatatattttt 11876978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 504 - 548
Target Start/End: Original strand, 11891941 - 11891985
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||||||||| ||||||| |||||||||||||||||||| ||||    
T  11891941 ttttttagagagtgataaattaatacttatgattaatatattttt 11891985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 13537505 - 13537453
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||| ||||| |||| ||||||||||||||| |||| |||||    
T  13537505 aattttttagagaataataaattaatgcttatgattaatatatttttaatttt 13537453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 13627053 - 13627001
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||| ||||| |||| ||||||||||||||| |||| |||||    
T  13627053 aattttttagagaataataaattaatgcttatgattaatatatttttaatttt 13627001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 481 - 553
Target Start/End: Complemental strand, 27085532 - 27085460
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttattt 553  Q
    ||||||||| ||||||||  |  ||||||||||| ||||||| |||| ||||||||||||||| |||| ||||    
T  27085532 ttcacatttgttgaaagagtattttttttagagagtgataaattaatgcttatgattaatatatttttaattt 27085460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 502 - 554
Target Start/End: Original strand, 40984992 - 40985044
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||||| ||||  |||||||||||||| |||| |||||    
T  40984992 aattttttagagaatgataaattaatgtttatgattaatatatttttaatttt 40985044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 29612149 - 29612102
Alignment:
Q  507 tttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||| ||||||||| |||||||||||||||||||| |||| |||||    
T  29612149 tttagacaatgataaattaatacttatgattaatatatttttaatttt 29612102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 503 - 554
Target Start/End: Complemental strand, 35353989 - 35353938
Alignment:
Q  503 attttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||| ||||||||||| ||||| |||||||||||||| |||| |||||    
T  35353989 attttttatagaatgataaattaatatttatgattaatatatttttaatttt 35353938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 507 - 554
Target Start/End: Complemental strand, 39779951 - 39779904
Alignment:
Q  507 tttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||| ||||||| ||| |||||||||||||||| ||||||||||    
T  39779951 tttagagagtgataaattaagacttatgattaatatattttttatttt 39779904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 3404782 - 3404736
Alignment:
Q  402 aggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    ||||||||||||||| |||||||||||  ||||||||| ||||||||    
T  3404782 aggctttgtttgggagtttggaggggaggggaggggagggttttgga 3404736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 481 - 543
Target Start/End: Complemental strand, 5941247 - 5941185
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatata 543  Q
    ||||||||||||||||||  || |||||| ||| |||||||| |||| ||||| |||||||||    
T  5941247 ttcacattttttgaaagagtaattttttttgagtatgataaattaatgcttataattaatata 5941185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 504 - 554
Target Start/End: Original strand, 10605077 - 10605127
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||| || || |||||||||||||| |||| |||||    
T  10605077 ttttttagagaatgataaattattatttatgattaatatatttttaatttt 10605127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000008
Query Start/End: Original strand, 623 - 669
Target Start/End: Complemental strand, 38676939 - 38676893
Alignment:
Q  623 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttat 669  Q
    |||| ||| ||||||||||||||||||||||| |||||| |||||||    
T  38676939 ttatataacctgaggcgtgacatagtcactgtccttgaggattttat 38676893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 399 - 448
Target Start/End: Original strand, 34272383 - 34272432
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttgga 448  Q
    |||||||||||||||||| |||| ||||||| |||||||||  |||||||    
T  34272383 cttaggctttgtttgggagtttgaaggggaagggaggggaggattttgga 34272432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 505 - 554
Target Start/End: Complemental strand, 38404501 - 38404452
Alignment:
Q  505 tttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||| |||| |||| ||||| |||||||||||||| ||||||||||    
T  38404501 tttttagaaaatggtaaattaatatttatgattaatatattttttatttt 38404452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0952 (Bit Score: 90; Significance: 5e-43; HSPs: 1)
Name: scaffold0952
Description:

Target: scaffold0952; HSP #1
Raw Score: 90; E-Value: 5e-43
Query Start/End: Original strand, 399 - 554
Target Start/End: Original strand, 3484 - 3640
Alignment:
Q  399 cttaggctttgtttgggaatttggaggggaaaggaggggagtgttttggagg-ttggaaatatatagaaaaatggacaaaaaa-ttcacattttttgaaa 496  Q
    |||||||||||||||||| ||||||||||||  || ||||| | ||||| || |||| ||||||||||||||||||||||||| ||||||||||||||||    
T  3484 cttaggctttgtttgggagtttggaggggaagagatgggagggctttggggggttggcaatatatagaaaaatggacaaaaaaattcacattttttgaaa 3583  T
Q  497 gaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
     ||||  ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  3584 taacag-ttttttagagaatgataaactaatacttatgattaatatacttttaatttt 3640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 77; Significance: 3e-35; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 431 - 531
Target Start/End: Complemental strand, 68000 - 67901
Alignment:
Q  431 ggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatact 530  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  68000 ggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agttttttagagaatgataaactaatact 67902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 431 - 531
Target Start/End: Complemental strand, 76105 - 76006
Alignment:
Q  431 ggaggggagtgttttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatact 530  Q
    ||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  76105 ggaggggagggctttgggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agttttttagagaatgataaactaatact 76007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 74; Significance: 2e-33; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 632 - 808
Target Start/End: Complemental strand, 82738 - 82561
Alignment:
Q  632 ctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatgaatcataact 731  Q
    ||||||||||||||||||||| | |||||| |||||||| || |||| |||||||||| |||||||||| ||||||  ||||||||||| ||||||| |     
T  82738 ctgaggcgtgacatagtcactatccttgaggattttatccgcctcataagcgcatatcctcccaggatacaacagttcttccccgttataaatcatagcc 82639  T
Q  732 gaaggttacagaacagctcaaattaatctcaaagataaccggagatgtaacccagaaa-ctcagtattttgtatgaga 808  Q
    | | || |||||||| |||||||| |||||||||||| |  |||||| |||||||||| |||| ||||||| ||||||    
T  82638 ggatgtgacagaacatctcaaatttatctcaaagatatcatgagatgcaacccagaaacctcaatattttggatgaga 82561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 73; Significance: 7e-33; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 73; E-Value: 7e-33
Query Start/End: Original strand, 443 - 531
Target Start/End: Original strand, 107669 - 107756
Alignment:
Q  443 tttggaggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatactt 531  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  107669 tttgggggttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaac-agttttttagagaatgataaactaatactt 107756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 46; Significance: 9e-17; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 46; E-Value: 9e-17
Query Start/End: Original strand, 452 - 541
Target Start/End: Complemental strand, 4489 - 4401
Alignment:
Q  452 tggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaata 541  Q
    ||||||||||||||||||| || |||  ||||||||| ||||||||||| | ||||| ||||||||||||| |||| |||||||||||||    
T  4489 tggaaatatatagaaaaatagaaaaatcattcacattctttgaaagaaccacttttt-agagaatgataaattaatgcttatgattaata 4401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 451 - 501
Target Start/End: Complemental strand, 661 - 611
Alignment:
Q  451 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 501  Q
    |||||||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  661 ttggaaatatatggaaaaatagacaaaaaattcacattttttaaaagaaca 611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 451 - 501
Target Start/End: Complemental strand, 10298 - 10248
Alignment:
Q  451 ttggaaatatatagaaaaatggacaaaaaattcacattttttgaaagaaca 501  Q
    |||||||||||| ||||||| ||||||||||||||||||||| ||||||||    
T  10298 ttggaaatatatggaaaaatagacaaaaaattcacattttttaaaagaaca 10248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0076 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 623 - 728
Target Start/End: Original strand, 6752 - 6857
Alignment:
Q  623 ttatgtaatctgaggcgtgacatagtcactgttcttgagaattttatctgcttcattagcgcatatcatcccaggatataacagtcattccccgttatga 722  Q
    |||| ||| |||||||||||||||||||||||  ||||| |||||||| || |||| || ||||||| | ||| |||| ||||||  ||||| | |||||    
T  6752 ttatctaaactgaggcgtgacatagtcactgtcattgaggattttatccgcctcataagtgcatatccttccatgatacaacagtttttccctgatatga 6851  T
Q  723 atcata 728  Q
    ||||||    
T  6852 atcata 6857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1763 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 481 - 554
Target Start/End: Original strand, 502 - 574
Alignment:
Q  481 ttcacattttttgaaagaacaaattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    ||||||||||||||||||  ||||||| ||||||||| |||| ||||  |||||||||||||| |||| |||||    
T  502 ttcacattttttgaaagagtaaatttt-tagagaatgttaaattaatgtttatgattaatatatttttaatttt 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0927 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0927
Description:

Target: scaffold0927; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 504 - 548
Target Start/End: Original strand, 2830 - 2874
Alignment:
Q  504 ttttttagagaatgataaactaatacttatgattaatatactttt 548  Q
    ||||| |||||||||||||||||||||||||||| ||||| ||||    
T  2830 tttttaagagaatgataaactaatacttatgattcatatattttt 2874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0245 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 4309 - 4257
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||| |||||||||||| |||| ||||||||||||||| |||| |||||    
T  4309 aattttttggagaatgataaattaatgcttatgattaatatatttttaatttt 4257  T

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Target: scaffold0229 (Bit Score: 33; Significance: 0.000000005; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 502 - 554
Target Start/End: Complemental strand, 4640 - 4588
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatatactttttatttt 554  Q
    |||||||| |||||||||||| |||| ||||||||||||||| |||| |||||    
T  4640 aattttttggagaatgataaattaatgcttatgattaatatatttttaatttt 4588  T

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Target: scaffold0007 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 502 - 543
Target Start/End: Original strand, 68618 - 68659
Alignment:
Q  502 aattttttagagaatgataaactaatacttatgattaatata 543  Q
    |||| |||||| ||||||||| ||||||||||||||||||||    
T  68618 aattatttagataatgataaattaatacttatgattaatata 68659  T

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