View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7971_low_34 (Length: 232)
Name: NF7971_low_34
Description: NF7971
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7971_low_34 |
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Alignment Details
Target: chr1 (Bit Score: 113; Significance: 2e-57; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 23 - 175
Target Start/End: Original strand, 38014260 - 38014412
Alignment:
| Q |
23 |
caacatactcacaatttgtccacaaaaaacagagaatatattcaaattgctagtcgacaacccaaatacaaggttgcttataagcataacacagtagtgc |
122 |
Q |
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| T |
38014260 |
caacatactcacgaatagtccacaaaatacagagaatatattcaaattgctagtcgagaacccaaatacaaggttgcttataagcataacactgaagtga |
38014359 |
T |
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| Q |
123 |
tggtacacattaaaataattccacaaagctatccaaattaccaacttgtcatt |
175 |
Q |
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||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |
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| T |
38014360 |
tggtacacattaaaatacttccacaaagctatccaaattaccaacctgtcatt |
38014412 |
T |
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