View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7972_low_29 (Length: 230)
Name: NF7972_low_29
Description: NF7972
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7972_low_29 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 19 - 216
Target Start/End: Original strand, 43538522 - 43538719
Alignment:
| Q |
19 |
ctatacgtcactacatctggcttgatcccaaattcttccattaatgtcaatgcctggccagattttactggtaggttactatctttatcacaaatcaaga |
118 |
Q |
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| T |
43538522 |
ctatacgtcactacatctggcttgatcccaaattcttccattaatgtcaatgcctggccagattttactggtaggttactatctttatcacaaatcaaga |
43538621 |
T |
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| Q |
119 |
tactgactaattaaaggccagcatgatataacgagtatagaaaatcaatttcgaaataggtggttgatatcttggagtattaatcttgctagtattat |
216 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
43538622 |
tactgactaattaaaggccagcatgatataacgagtatagaaaatcaatttcgaaataggtggttgatatcttggagtattaatcttgctagtcttat |
43538719 |
T |
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