View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7974_low_1 (Length: 315)

Name: NF7974_low_1
Description: NF7974
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7974_low_1
NF7974_low_1
[»] chr7 (47 HSPs)
chr7 (1-129)||(36534795-36534925)
chr7 (1-162)||(1085593-1085757)
chr7 (1-138)||(14681527-14681666)
chr7 (1-129)||(7517597-7517729)
chr7 (1-135)||(30244287-30244425)
chr7 (1-99)||(7554042-7554142)
chr7 (1-99)||(45434653-45434753)
chr7 (5-135)||(23380-23514)
chr7 (1-162)||(47129112-47129275)
chr7 (5-162)||(30245098-30245254)
chr7 (1-90)||(22566712-22566803)
chr7 (1-135)||(30032584-30032722)
chr7 (1-135)||(6054577-6054715)
chr7 (1-135)||(34218037-34218175)
chr7 (1-135)||(40094777-40094915)
chr7 (5-135)||(45433262-45433396)
chr7 (5-127)||(45754736-45754862)
chr7 (5-90)||(19122752-19122839)
chr7 (1-99)||(24838742-24838843)
chr7 (5-99)||(11845212-11845308)
chr7 (5-99)||(22567080-22567176)
chr7 (1-99)||(24177452-24177552)
chr7 (30-135)||(28300256-28300366)
chr7 (1-99)||(29157582-29157682)
chr7 (1-135)||(41854652-41854789)
chr7 (1-51)||(30255356-30255406)
chr7 (14-135)||(37533367-37533492)
chr7 (1-134)||(40230295-40230432)
chr7 (1-96)||(118345-118442)
chr7 (1-88)||(16569213-16569302)
chr7 (1-88)||(16596360-16596449)
chr7 (1-54)||(37533098-37533151)
chr7 (94-162)||(30244466-30244533)
chr7 (23-160)||(30253531-30253667)
chr7 (1-90)||(8128491-8128582)
chr7 (1-51)||(30245511-30245561)
chr7 (6-52)||(36109007-36109053)
chr7 (1-54)||(30244718-30244771)
chr7 (244-285)||(36534754-36534795)
chr7 (94-162)||(30253684-30253751)
chr7 (94-138)||(41910586-41910630)
chr7 (5-99)||(43241516-43241612)
chr7 (1-90)||(36939783-36939874)
chr7 (67-100)||(23569042-23569075)
chr7 (1-161)||(36622977-36623140)
chr7 (1-54)||(41910682-41910735)
chr7 (94-162)||(30245269-30245336)
[»] chr1 (44 HSPs)
chr1 (5-162)||(31767138-31767298)
chr1 (1-135)||(11977297-11977435)
chr1 (1-135)||(3537602-3537740)
chr1 (1-135)||(34649455-34649593)
chr1 (1-161)||(37850579-37850741)
chr1 (1-129)||(37556128-37556260)
chr1 (1-162)||(3875308-3875472)
chr1 (1-135)||(41142389-41142528)
chr1 (2-129)||(37555748-37555878)
chr1 (2-89)||(38804406-38804495)
chr1 (1-99)||(17294594-17294694)
chr1 (1-99)||(34364524-34364624)
chr1 (1-127)||(66100-66229)
chr1 (1-99)||(34364942-34365042)
chr1 (1-135)||(44290827-44290966)
chr1 (3-165)||(45084401-45084560)
chr1 (1-130)||(5575121-5575252)
chr1 (1-135)||(26661525-26661663)
chr1 (1-150)||(41157008-41157161)
chr1 (9-162)||(66449-66605)
chr1 (1-99)||(3550737-3550837)
chr1 (1-99)||(22077536-22077636)
chr1 (1-87)||(44290511-44290599)
chr1 (1-152)||(48588474-48588629)
chr1 (1-99)||(50052064-50052164)
chr1 (1-99)||(9955924-9956026)
chr1 (5-135)||(14318888-14319022)
chr1 (1-135)||(29798216-29798354)
chr1 (1-90)||(40082424-40082514)
chr1 (1-54)||(3537235-3537288)
chr1 (1-99)||(32594757-32594857)
chr1 (9-135)||(22077113-22077243)
chr1 (1-131)||(24600321-24600455)
chr1 (1-135)||(41157392-41157530)
chr1 (1-135)||(41759500-41759638)
chr1 (9-135)||(22077832-22077961)
chr1 (54-135)||(11977015-11977099)
chr1 (1-163)||(24131964-24132126)
chr1 (1-54)||(41184513-41184566)
chr1 (5-162)||(5319943-5320102)
chr1 (1-99)||(22793295-22793396)
chr1 (3-99)||(26661939-26662037)
chr1 (1-54)||(21378129-21378182)
chr1 (1-53)||(5528843-5528895)
[»] chr5 (41 HSPs)
chr5 (1-135)||(25327952-25328090)
chr5 (1-135)||(1028520-1028658)
chr5 (1-135)||(42405601-42405737)
chr5 (1-99)||(13415801-13415901)
chr5 (1-131)||(26075168-26075303)
chr5 (1-134)||(18603124-18603261)
chr5 (1-161)||(32487411-32487573)
chr5 (1-98)||(299506-299605)
chr5 (5-135)||(3295348-3295481)
chr5 (5-135)||(6500471-6500605)
chr5 (1-135)||(36492220-36492358)
chr5 (1-135)||(40296318-40296456)
chr5 (1-134)||(624213-624350)
chr5 (1-162)||(27502013-27502177)
chr5 (1-162)||(34753003-34753166)
chr5 (9-129)||(26074637-26074761)
chr5 (1-99)||(26074822-26074923)
chr5 (1-135)||(15370116-15370254)
chr5 (10-162)||(15370428-15370583)
chr5 (1-90)||(41170651-41170742)
chr5 (1-131)||(35150024-35150157)
chr5 (5-91)||(11417026-11417114)
chr5 (1-135)||(36568572-36568708)
chr5 (1-99)||(41632799-41632899)
chr5 (21-130)||(26590918-26591031)
chr5 (6-131)||(35167845-35167974)
chr5 (1-129)||(26074155-26074287)
chr5 (1-99)||(3295056-3295156)
chr5 (1-61)||(39309701-39309761)
chr5 (1-90)||(6224213-6224304)
chr5 (5-135)||(6500843-6500977)
chr5 (67-162)||(42435512-42435609)
chr5 (1-99)||(9498695-9498795)
chr5 (1-135)||(623835-623973)
chr5 (1-50)||(300976-301025)
chr5 (1-49)||(12662745-12662793)
chr5 (1-60)||(33747788-33747848)
chr5 (67-130)||(38427632-38427697)
chr5 (1-50)||(5723883-5723932)
chr5 (1-54)||(35914866-35914919)
chr5 (1-99)||(36521937-36522037)
[»] chr6 (35 HSPs)
chr6 (1-162)||(2579850-2580013)
chr6 (1-135)||(16454924-16455062)
chr6 (1-135)||(29518520-29518658)
chr6 (1-135)||(29518937-29519075)
chr6 (1-135)||(32741196-32741334)
chr6 (2-130)||(10074371-10074503)
chr6 (1-135)||(14748345-14748479)
chr6 (1-99)||(1950226-1950326)
chr6 (1-160)||(5832007-5832167)
chr6 (1-162)||(2578420-2578583)
chr6 (1-99)||(26544066-26544166)
chr6 (1-135)||(2378143-2378281)
chr6 (3-99)||(1127379-1127477)
chr6 (1-92)||(32460628-32460721)
chr6 (1-99)||(3058243-3058343)
chr6 (1-135)||(10073619-10073755)
chr6 (1-90)||(593759-593850)
chr6 (1-90)||(2377771-2377862)
chr6 (67-159)||(12085014-12085107)
chr6 (1-138)||(6999796-6999937)
chr6 (67-162)||(12071668-12071764)
chr6 (1-162)||(16454592-16454756)
chr6 (1-99)||(3409276-3409376)
chr6 (6-99)||(16107700-16107795)
chr6 (1-90)||(35210221-35210312)
chr6 (1-135)||(1846765-1846903)
chr6 (1-162)||(2579087-2579246)
chr6 (6-162)||(2843576-2843736)
chr6 (3-99)||(10074032-10074130)
chr6 (1-99)||(3415475-3415575)
chr6 (1-53)||(9062438-9062490)
chr6 (7-132)||(5958613-5958738)
chr6 (4-54)||(35210498-35210548)
chr6 (5-54)||(16108084-16108133)
chr6 (1-60)||(12092563-12092623)
[»] chr2 (46 HSPs)
chr2 (1-131)||(14745674-14745808)
chr2 (1-132)||(36178611-36178746)
chr2 (1-131)||(6422127-6422261)
chr2 (1-138)||(962615-962756)
chr2 (1-135)||(35580727-35580864)
chr2 (1-135)||(38796621-38796761)
chr2 (1-162)||(42514666-42514830)
chr2 (5-99)||(15880284-15880380)
chr2 (1-134)||(5543002-5543139)
chr2 (1-162)||(6421402-6421566)
chr2 (1-99)||(6712993-6713094)
chr2 (1-133)||(37632602-37632738)
chr2 (1-99)||(40733534-40733634)
chr2 (1-135)||(5542628-5542766)
chr2 (1-90)||(37106205-37106296)
chr2 (1-135)||(41283478-41283616)
chr2 (1-132)||(15511501-15511636)
chr2 (1-64)||(38796295-38796359)
chr2 (6-87)||(33731670-33731753)
chr2 (1-135)||(40679632-40679770)
chr2 (67-161)||(6421816-6421911)
chr2 (1-99)||(5367472-5367572)
chr2 (1-133)||(7598626-7598754)
chr2 (1-131)||(14745300-14745435)
chr2 (1-99)||(28254278-28254378)
chr2 (8-90)||(31259666-31259750)
chr2 (1-135)||(37105941-37106079)
chr2 (1-135)||(40733900-40734037)
chr2 (68-135)||(3673154-3673223)
chr2 (1-162)||(23346254-23346417)
chr2 (2-90)||(36178221-36178311)
chr2 (1-89)||(36178320-36178410)
chr2 (1-163)||(40163348-40163514)
chr2 (70-134)||(6421714-6421780)
chr2 (2-53)||(16542467-16542518)
chr2 (5-54)||(31899514-31899563)
chr2 (1-53)||(1769909-1769961)
chr2 (1-53)||(28254201-28254253)
chr2 (1-99)||(29873578-29873678)
chr2 (1-90)||(28531364-28531455)
chr2 (25-99)||(41678409-41678484)
chr2 (67-134)||(3672786-3672855)
chr2 (7-135)||(7598251-7598383)
chr2 (1-96)||(29874067-29874164)
chr2 (67-100)||(30323549-30323582)
chr2 (1-41)||(36785664-36785704)
[»] chr4 (63 HSPs)
chr4 (1-135)||(2740717-2740853)
chr4 (4-132)||(10245940-10246071)
chr4 (1-162)||(36608636-36608800)
chr4 (1-160)||(44620677-44620838)
chr4 (1-138)||(25483353-25483494)
chr4 (1-135)||(39404035-39404173)
chr4 (1-99)||(50630794-50630894)
chr4 (1-135)||(39404415-39404553)
chr4 (3-131)||(54936215-54936346)
chr4 (1-161)||(36629254-36629418)
chr4 (1-138)||(54017593-54017734)
chr4 (3-135)||(22183265-22183401)
chr4 (1-135)||(1731648-1731786)
chr4 (5-135)||(44620374-44620508)
chr4 (1-135)||(50002443-50002581)
chr4 (1-99)||(54108930-54109029)
chr4 (9-99)||(4955356-4955448)
chr4 (1-99)||(34646688-34646788)
chr4 (4-90)||(44621022-44621110)
chr4 (1-99)||(45496822-45496922)
chr4 (5-90)||(20825857-20825944)
chr4 (67-151)||(23817666-23817752)
chr4 (7-137)||(32941122-32941256)
chr4 (3-54)||(54017788-54017839)
chr4 (1-135)||(55933125-55933263)
chr4 (1-138)||(3340824-3340965)
chr4 (1-162)||(22027936-22028100)
chr4 (1-135)||(45489333-45489470)
chr4 (1-129)||(3244458-3244590)
chr4 (5-149)||(50459742-50459890)
chr4 (1-61)||(52884904-52884965)
chr4 (1-54)||(54343087-54343140)
chr4 (3-138)||(4390099-4390238)
chr4 (1-99)||(20826234-20826334)
chr4 (1-99)||(49880177-49880277)
chr4 (1-135)||(41370374-41370512)
chr4 (2-135)||(18932750-18932887)
chr4 (26-162)||(22028342-22028483)
chr4 (16-99)||(43174539-43174624)
chr4 (9-54)||(49076534-49076579)
chr4 (1-99)||(52884712-52884813)
chr4 (1-99)||(16888855-16888955)
chr4 (1-99)||(28034246-28034346)
chr4 (26-162)||(34004560-34004698)
chr4 (5-135)||(48111699-48111833)
chr4 (67-138)||(3700442-3700515)
chr4 (30-98)||(18879852-18879922)
chr4 (1-54)||(3341145-3341198)
chr4 (1-50)||(44620313-44620362)
chr4 (1-54)||(54741264-54741317)
chr4 (1-95)||(2741088-2741184)
chr4 (9-135)||(16889537-16889667)
chr4 (1-135)||(36572036-36572174)
chr4 (7-50)||(44620968-44621011)
chr4 (1-47)||(41707557-41707603)
chr4 (1-90)||(49302921-49303014)
chr4 (1-50)||(44621443-44621492)
chr4 (110-163)||(51768034-51768086)
chr4 (1-54)||(54108553-54108606)
chr4 (38-96)||(2891864-2891924)
chr4 (1-53)||(3700382-3700434)
chr4 (67-99)||(15841407-15841439)
chr4 (74-135)||(43174233-43174296)
[»] chr3 (44 HSPs)
chr3 (1-135)||(54017819-54017957)
chr3 (8-135)||(54018201-54018332)
chr3 (1-135)||(33803255-33803393)
chr3 (1-99)||(52634693-52634792)
chr3 (1-159)||(29644882-29645043)
chr3 (1-163)||(35946539-35946705)
chr3 (1-135)||(42342391-42342529)
chr3 (1-130)||(39934963-39935096)
chr3 (3-135)||(12114565-12114701)
chr3 (3-135)||(41359768-41359904)
chr3 (1-135)||(50612450-50612593)
chr3 (1-99)||(29644622-29644722)
chr3 (1-135)||(32589720-32589858)
chr3 (5-135)||(37990642-37990776)
chr3 (1-135)||(37990980-37991118)
chr3 (3-149)||(45395642-45395792)
chr3 (1-150)||(25739413-25739566)
chr3 (1-154)||(43346775-43346932)
chr3 (1-99)||(22304586-22304686)
chr3 (1-99)||(39914269-39914369)
chr3 (1-132)||(8327921-8328060)
chr3 (1-135)||(15772871-15773009)
chr3 (1-135)||(53577381-53577519)
chr3 (1-88)||(21832395-21832484)
chr3 (12-147)||(44160538-44160674)
chr3 (1-135)||(1634318-1634456)
chr3 (1-90)||(39389087-39389178)
chr3 (5-135)||(42342093-42342227)
chr3 (1-89)||(3384317-3384407)
chr3 (9-135)||(53117978-53118107)
chr3 (1-54)||(31190034-31190087)
chr3 (1-99)||(47964559-47964659)
chr3 (1-99)||(49336728-49336828)
chr3 (67-162)||(7766759-7766854)
chr3 (1-99)||(32462599-32462700)
chr3 (1-136)||(32462902-32463042)
chr3 (1-61)||(42584902-42584963)
chr3 (1-99)||(3135114-3135214)
chr3 (4-128)||(11661971-11662099)
chr3 (1-98)||(15773209-15773308)
chr3 (1-159)||(25755411-25755572)
chr3 (70-100)||(46546258-46546288)
chr3 (1-61)||(7767394-7767455)
chr3 (94-162)||(9239927-9239994)
[»] chr8 (47 HSPs)
chr8 (1-135)||(3038293-3038431)
chr8 (1-138)||(45121656-45121797)
chr8 (1-162)||(8918743-8918905)
chr8 (1-131)||(5420668-5420802)
chr8 (1-135)||(40518599-40518737)
chr8 (3-135)||(1513918-1514054)
chr8 (1-99)||(147468-147568)
chr8 (1-134)||(3670077-3670214)
chr8 (1-161)||(3669704-3669867)
chr8 (1-133)||(9608762-9608898)
chr8 (9-152)||(9483174-9483320)
chr8 (8-135)||(45122648-45122779)
chr8 (1-138)||(70274-70415)
chr8 (1-135)||(9309372-9309509)
chr8 (1-152)||(25561801-25561957)
chr8 (6-161)||(37544469-37544626)
chr8 (1-99)||(30359288-30359388)
chr8 (16-135)||(40518103-40518226)
chr8 (1-63)||(41416249-41416312)
chr8 (1-130)||(34834893-34835026)
chr8 (1-99)||(30359626-30359726)
chr8 (1-128)||(45122067-45122198)
chr8 (1-90)||(34835226-34835317)
chr8 (1-98)||(45121952-45122051)
chr8 (5-162)||(18371970-18372131)
chr8 (1-131)||(30441098-30441236)
chr8 (6-90)||(43274829-43274915)
chr8 (1-88)||(8794128-8794217)
chr8 (19-98)||(9507817-9507898)
chr8 (1-54)||(18372787-18372840)
chr8 (1-50)||(25561736-25561785)
chr8 (12-90)||(40579556-40579636)
chr8 (1-135)||(33113370-33113508)
chr8 (2-135)||(6876865-6877002)
chr8 (1-164)||(18371635-18371797)
chr8 (5-54)||(9482692-9482741)
chr8 (1-54)||(18372344-18372397)
chr8 (3-90)||(18380067-18380156)
chr8 (1-164)||(41972175-41972343)
chr8 (7-130)||(1014253-1014380)
chr8 (1-53)||(18373020-18373072)
chr8 (5-99)||(20870614-20870710)
chr8 (10-96)||(32305503-32305591)
chr8 (5-163)||(1013846-1014008)
chr8 (67-135)||(41129073-41129143)
chr8 (10-90)||(18372656-18372734)
chr8 (5-61)||(3037788-3037845)
[»] scaffold0702 (2 HSPs)
scaffold0702 (1-61)||(223-283)
scaffold0702 (1-90)||(564-655)
[»] scaffold0078 (1 HSPs)
scaffold0078 (5-99)||(5378-5474)
[»] scaffold0391 (2 HSPs)
scaffold0391 (1-134)||(1110-1247)
scaffold0391 (94-162)||(1660-1727)
[»] scaffold0734 (2 HSPs)
scaffold0734 (1-54)||(5794-5847)
scaffold0734 (1-51)||(5413-5463)
[»] scaffold0171 (1 HSPs)
scaffold0171 (1-87)||(17507-17597)
[»] scaffold0504 (1 HSPs)
scaffold0504 (1-54)||(10199-10252)


Alignment Details
Target: chr7 (Bit Score: 103; Significance: 3e-51; HSPs: 47)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 36534925 - 36534795
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||    
T  36534925 tgtcccacctcggataaaacagtagaggttgaacaccttataagtaagaggacccataaacctaaagtcttaaggttttgggtaagagtgtggcgtctct 36534826  T
Q  99 cacaagtgtggttgttccagcctcgatgtgg 129  Q
    |||||||||||||||||||||||||||||||    
T  36534825 cacaagtgtggttgttccagcctcgatgtgg 36534795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 1085757 - 1085593
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | |||||||||||||||||||||||| |||||||    
T  1085757 tgtcccacatcggataaaatagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctct 1085658  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |  ||  |||||||||||| ||||||||||||||||||| ||    ||||||||||||||||||||    
T  1085657 cttacttgtgtggttgttctagcctcgatgtggacggtc-cccctggctcccctcatgacccaaca 1085593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 14681527 - 14681666
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| |||| ||||||||||| || ||||||||||| || ||||||| |  | ||||||||||||||||||||||||  ||||||    
T  14681527 tgtcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagagggcccataaacccattgtcttaaggttttgggtaagagtgtggtgtctct 14681626  T
Q  99 cacaagtgtggttgttccagcctcgatgtggacggtctcc 138  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  14681627 cacaagtgtggttgttctagccttgatgtggacggtctcc 14681666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 7517597 - 7517729
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtc--t 96  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  |||  |    
T  7517597 tgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctgt 7517696  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtgg 129  Q
    |||||  |||||||||||| |||||||||||||    
T  7517697 ctcacttgtgtggttgttctagcctcgatgtgg 7517729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 30244287 - 30244425
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacg--tct 96  Q
    ||||||||||||||||||| |||| |||||||| || |||||||||||||||| |||||||| |  | ||||||||||||||||||||||||  |  |||    
T  30244287 tgtcccacatcggataaaagagtaaaggttgaagaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctct 30244386  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |||||  |||||||||||| |||||||||||||| ||||    
T  30244387 ctcacttgtgtggttgttcaagcctcgatgtggatggtc 30244425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 7554042 - 7554142
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| | || ||||||||||||||||||||||||  ||||||    
T  7554042 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccatagccttaaggttttgggtaagagtgtggtgtctct 7554141  T
Q  99 c 99  Q
    |    
T  7554142 c 7554142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45434653 - 45434753
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| |||||||| ||  | ||||||||||||||||||||||||| ||||||    
T  45434653 tgtcccacatcggataaaaaagtaaaggttgaacaccttataagtaagaggacccataaacttactgccttaaggttttgggtaagagtgtgatgtctct 45434752  T
Q  99 c 99  Q
    |    
T  45434753 c 45434753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 23514 - 23380
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    |||||||||||| || |||| ||||||||||| ||||||||||||||| |||||||||||  | ||||||||||||||||||||||||  |||||||       
T  23514 ccacatcggatacaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggttttgggtaagagtgtggtgtctctcttg 23415  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtc 135  Q
    || ||| |||||||| ||||||||| |||||||||    
T  23414 catgtgcggttgttctagcctcgatttggacggtc 23380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 47129112 - 47129275
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtgacg--tct 96  Q
    |||| |||||||||||||| |||| |||||||||   ||||||||||||||| ||||||||| |  || ||||||||||||||| |||||||  |  |||    
T  47129112 tgtctcacatcggataaaatagtaaaggttgaacctcttataagtaagaggacccataaacccatcgctttaaggttttgggtaggagtgtggtgtctct 47129211  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    ||||||||||||||||||| |||||| |||| ||||||| ||   |||||||||||||| ||||||    
T  47129212 ctcacaagtgtggttgttctagcctcaatgtagacggtcccc--gagctcccctcatgatccaaca 47129275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 162
Target Start/End: Original strand, 30245098 - 30245254
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctcaca 102  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||| |||| ||||||  |  || |||||||||||||||||||||||  || |||| |     
T  30245098 ccacatcggataaaagagtaaaggttgaacaccttataagtaagacgacccataaactcattgccttaaggttttgggtaagagtgtg--gtgtctctct 30245195  T
Q  103 agtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
     |||||||||||| |||||||||||||| |||| ||   |||||||||| ||||||||||    
T  30245196 tgtgtggttgttcaagcctcgatgtggatggtc-ccccgagctcccctcgtgacccaaca 30245254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 22566803 - 22566712
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||    
T  22566803 tgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 22566712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 30032584 - 30032722
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||| |||||| ||||   ||||||||| ||||||||||||| | ||||||||||| ||| ||||||||||||||||||||||||| |||||    
T  30032584 tgtcccacatcgaataaaagagtaagtgttgaacaccttataagtaagagtatccataaacctatagccttaaggttttgggtaagagtgtgacatctct 30032683  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||| |||||||| | |||||||||||||||||    
T  30032684 cttgcttgtgcggttgttctatcctcgatgtggacggtc 30032722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 6054577 - 6054715
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||||||||||| |||| | ||||||||| ||||||||||||||| ||||||||  |  | ||||||||||||||||||||||||  ||||||    
T  6054577 tgtctcacatcggataaaatagtaaatgttgaacaccttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctct 6054676  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  ||  || ||||||||| ||||| |||||||||||||    
T  6054677 cctacttgtatggttgttctagccttgatgtggacggtc 6054715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 34218175 - 34218037
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacg--tct 96  Q
    |||| |||||||||||||| |||| | ||||||||| |||||||| ||||||| |||||||| |  | ||||||||||||||||||||||||  |  |||    
T  34218175 tgtctcacatcggataaaaaagtaaatgttgaacaccttataagtgagaggactcataaacccattgtcttaaggttttgggtaagagtgtggtgtctct 34218076  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||| |  || ||||||||| |||||||||||||||||||    
T  34218075 ctcgcttgtatggttgttcaagcctcgatgtggacggtc 34218037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 40094915 - 40094777
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| ||||||| |||||| |||| ||||| ||||| ||||||||||||||| ||||||||| |  | |||||||||||||||||||||||| |||||||    
T  40094915 tgtctcacatcgaataaaagagtaaaggttcaacaccttataagtaagaggacccataaacccatcgtcttaaggttttgggtaagagtgtggcgtctct 40094816  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||| |||||||| ||||||||||||| |||||    
T  40094815 cttgcttgtgaggttgttctagcctcgatgtggtcggtc 40094777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 45433262 - 45433396
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||| || ||||||||||  | |||||| |||||||||||||||||  |||||||       
T  45433262 ccacatcggataaaagagtaaaggttgaacaccttataagtaagagaactcataaacctattgccttaagattttgggtaagagtgtggtgtctctcttg 45433361  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  ||| |||||||| ||||||||||||| |||||    
T  45433362 cttgtggggttgttctagcctcgatgtggtcggtc 45433396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 127
Target Start/End: Original strand, 45754736 - 45754862
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    ||||||||||||||| |||| | ||||||||| |||||||||||| ||| |||||||| | || ||||||||||||||||||||||||  |||||||       
T  45754736 ccacatcggataaaatagtaaatgttgaacaccttataagtaagatgactcataaacccatagccttaaggttttgggtaagagtgtggtgtctctcttg 45754835  T
Q  101 caagtgtggttgttccagcctcgatgt 127  Q
    |  |||||||||||| |||||||||||    
T  45754836 cttgtgtggttgttcaagcctcgatgt 45754862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 19122752 - 19122839
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||| | |  | ||||||||||||||||||||||||    
T  19122752 ccacatcggataaaatagtaaaggttgaacaccttataagtaagaggactcataaatccattgccttaaggttttgggtaagagtgtg 19122839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 24838843 - 24838742
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaaga-gga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctc 97  Q
    |||| ||||||| |||||| |||| ||||||||||| |||||||||||| ||| |||||||||    | |||||||||||||||||||||||||||||||    
T  24838843 tgtctcacatcgaataaaagagtaaaggttgaacaccttataagtaagaaggatccataaacccgttgtcttaaggttttgggtaagagtgtgacgtctc 24838744  T
Q  98 tc 99  Q
    ||    
T  24838743 tc 24838742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 11845212 - 11845308
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||| | |  | ||||||||||||| ||||||||||  |||||||    
T  11845212 ccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttggataagagtgtggtgtctctc 11845308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 22567176 - 22567080
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||  |  | ||||||||||| ||||||||||||  |||||||    
T  22567176 ccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggtttttggtaagagtgtggtgtctctc 22567080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 24177452 - 24177552
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||| ||||||| ||||||||||| ||| ||||||||| |  | ||||| ||||| |||||||||||| |||||||    
T  24177452 tgtcccacatcggataaaagagtaaaggctgaacaccttataagtaagcggacccataaacccattgccttaaagtttttggtaagagtgtggcgtctct 24177551  T
Q  99 c 99  Q
    |    
T  24177552 c 24177552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 30 - 135
Target Start/End: Complemental strand, 28300366 - 28300256
Alignment:
Q  30 tgaacacattataagtaagagga--ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--acaagtgtggttgttccagcctcga 124  Q
    ||||||| ||||||||||||| |  ||||||||| |  | |||||| ||||||||||||||||| ||||||||   |||||||||||||||  |||||||    
T  28300366 tgaacaccttataagtaagagaaccccataaacccattgccttaagattttgggtaagagtgtggcgtctctcttgcaagtgtggttgttcgggcctcga 28300267  T
Q  125 tgtggacggtc 135  Q
    |||||||||||    
T  28300266 tgtggacggtc 28300256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 29157582 - 29157682
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||| ||||||||| |||| ||||||||||| |||||||||||| || ||||||| | |  | ||||||||||||||||||||||||  ||||||    
T  29157582 tgtcccacaccggataaaatagtaaaggttgaacaccttataagtaagacgacccataaatccattgccttaaggttttgggtaagagtgtggtgtctct 29157681  T
Q  99 c 99  Q
    |    
T  29157682 c 29157682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41854652 - 41854789
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtc--t 96  Q
    ||||||||||| | ||||| |||| ||||||||||| ||||||| |||| |||| |||||  ||| || ||||||||||||||||||||||||||||  |    
T  41854652 tgtcccacatcag-taaaagagtaaaggttgaacaccttataagcaagatgacctataaatataatgccttaaggttttgggtaagagtgtgacgtcttt 41854750  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    || ||  ||| |||||||| |||||| |||| |||||||    
T  41854751 cttacttgtgcggttgttctagcctcaatgtagacggtc 41854789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30255356 - 30255406
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagg 51  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||    
T  30255356 tgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagagg 30255406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 14 - 135
Target Start/End: Complemental strand, 37533492 - 37533367
Alignment:
Q  14 ataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctc--tcacaagtgtgg 109  Q
    |||||| |||| ||||||||||| ||||||||||||||| ||||||| | |  | ||||||||||||||||||||||||  |||||  |  |  ||| ||    
T  37533492 ataaaatagtaaaggttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaagagtgtggtgtctcttttgcttgtgcgg 37533393  T
Q  110 ttgttccagcctcgatgtggacggtc 135  Q
    |||||| |||||||||||||||||||    
T  37533392 ttgttctagcctcgatgtggacggtc 37533367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 40230432 - 40230295
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||| |||||| |||| | ||||||||  ||||||||||||||| ||||||||| | || ||||||||||||||||| ||| ||  ||||||    
T  40230432 tgtcccacatcgaataaaaaagtaaaagttgaacatcttataagtaagaggacccataaacccatagtcttaaggttttgggtaaaagtctggtgtctct 40230333  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggt 134  Q
    |   ||||||| ||| ||| | |||| |||||||||||    
T  40230332 cttgcaagtgtagttattctaacctctatgtggacggt 40230295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 118442 - 118345
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtgacgtct 96  Q
    ||||||||||| |||| || |||| ||||||||||| | ||||||||||||| ||||||||| |  | | |||||||||||||||||||||| |||||    
T  118442 tgtcccacatcagatagaaaagtaaaggttgaacacctaataagtaagaggatccataaacccattaccgtaaggttttgggtaagagtgtggcgtct 118345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 16569213 - 16569302
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtg 88  Q
    |||| ||||||||||| ||||||| |||||||| || ||||||||||||||| ||||||||| |  | ||||||||||| ||||||||||    
T  16569213 tgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggtaagagtg 16569302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 16596449 - 16596360
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtg 88  Q
    |||| ||||||||||| ||||||| |||||||| || ||||||||||||||| ||||||||| |  | ||||||||||| ||||||||||    
T  16596449 tgtctcacatcggatagaacagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggtttttggtaagagtg 16596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 37533151 - 37533098
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||||||||| |||||||| |||| ||||||||||| |||||||||||||||||    
T  37533151 tgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacc 37533098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 30244466 - 30244533
Alignment:
Q  94 tctctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    ||||||||  |||||||||||| ||||||||||||||||||| ||  | ||||||||||||||||||||    
T  30244466 tctctcacttgtgtggttgttcaagcctcgatgtggacggtc-cctcaggctcccctcatgacccaaca 30244533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 160
Target Start/End: Original strand, 30253531 - 30253667
Alignment:
Q  23 tagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctcacaagtgtggttgttccagcc 120  Q
    ||||||||||| || ||||||||||||| ||| ||||||  |  || |||||||||||||||||||||||  || |||| |  |||||||||||| ||||    
T  30253531 tagaggttgaagaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtg--gtgtctctcttgtgtggttgttcaagcc 30253628  T
Q  121 tcgatgtggacggtctccaaaagctcccctcatgacccaa 160  Q
    |||||||||| |||| ||   |||||||||| ||||||||    
T  30253629 tcgatgtggatggtc-ccccgagctcccctcgtgacccaa 30253667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 8128582 - 8128491
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtg 90  Q
    ||||||| |||||||| || | || ||||||||||| ||||| ||||||||| ||||||||| | || ||||||||||||| ||||||||||    
T  8128582 tgtcccatatcggatagaaaaataaaggttgaacaccttatatgtaagaggacccataaacccataaccttaaggttttggttaagagtgtg 8128491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 30245511 - 30245561
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagg 51  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||||||||||    
T  30245511 tgtcccacatcagataaaagagtaaaggttgaacaccttataagtaagagg 30245561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 36109053 - 36109007
Alignment:
Q  6 cacatcggataaaacagtagaggttgaacacattataagtaagagga 52  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||||    
T  36109053 cacatcggataaaagagtaaaggttgaacaccttataagtaagagga 36109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 30244718 - 30244771
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||||||||| |||||||| |||| ||||||||||| |||||| ||||||||||    
T  30244718 tgtcccacattggataaaagagtaaaggttgaacaccttataaataagaggacc 30244771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 244 - 285
Target Start/End: Complemental strand, 36534795 - 36534754
Alignment:
Q  244 ggagttaatgtagatataccatttataatccagagtctgaaa 285  Q
    |||| |||||| ||||||||||||||||||||||||||||||    
T  36534795 ggagctaatgtggatataccatttataatccagagtctgaaa 36534754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 30253684 - 30253751
Alignment:
Q  94 tctctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    ||||||||  |||||||||||| ||||||||||||||| ||| ||  | ||||||||||||||||||||    
T  30253684 tctctcacttgtgtggttgttcaagcctcgatgtggactgtc-ccccaggctcccctcatgacccaaca 30253751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 138
Target Start/End: Complemental strand, 41910630 - 41910586
Alignment:
Q  94 tctctcacaagtgtggttgttccagcctcgatgtggacggtctcc 138  Q
    |||||||||||||||||||||| | |||||||||||||| |||||    
T  41910630 tctctcacaagtgtggttgttctaacctcgatgtggacgatctcc 41910586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 43241516 - 43241612
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||||||| | || ||||||||||| |||||||||| ||||| ||||||| ||  | ||||||||||| ||||| ||| ||| |||||||    
T  43241516 ccacatcggataaaaaaataaaggttgaacaccttataagtaaaaggactcataaacttattgacttaaggttttaggtaaaagtatgatgtctctc 43241612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 36939874 - 36939783
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||||| |||| |||||| |||| | ||||||||| ||||||||||||||| ||||||| | |  | ||||||||||||||||| ||||||    
T  36939874 tgtcccaaatcgtataaaatagtaaaagttgaacaccttataagtaagaggacccataaatccattgccttaaggttttgggtaaaagtgtg 36939783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Complemental strand, 23569075 - 23569042
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacgtctctca 100  Q
    ||||||||||||||||||||||||| ||||||||    
T  23569075 cttaaggttttgggtaagagtgtgatgtctctca 23569042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 36622977 - 36623140
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg--acgtct 96  Q
    ||||||||||||||||||| |||| ||||| ||||  ||||||||| ||||| ||||||| | |  | |||||||||||||||| |||| ||   | |||    
T  36622977 tgtcccacatcggataaaatagtaaaggttaaacattttataagtaggaggatccataaatccattgccttaaggttttgggtaggagtatggtgcctct 36623076  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaac 161  Q
    || ||  ||||| ||||||   ||| ||||||||||||| ||   ||||||||||||||||||||    
T  36623077 cttacttgtgtgattgttctgaccttgatgtggacggtc-ccttgagctcccctcatgacccaac 36623140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41910735 - 41910682
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    ||||||||||||||||||| |||| |||||||| || |||||| | ||||||||    
T  41910735 tgtcccacatcggataaaagagtaaaggttgaataccttataactgagaggacc 41910682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 30245269 - 30245336
Alignment:
Q  94 tctctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    ||||||||  |||||||||||| |||||| |||||||||||| ||  | |||||||| |||||||||||    
T  30245269 tctctcacttgtgtggttgttcaagcctcaatgtggacggtc-ccccatgctccccttatgacccaaca 30245336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 2e-34; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 31767298 - 31767138
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtc--tctca 100  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| |||| ||||||| | |||||||||||||||||||||||||||||  |||      
T  31767298 ccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccattaacctaatgccttaaggttttgggtaagagtgtgacgtctatcttg 31767199  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |  |||||||||||| || |||||||||||||||| ||  ||||| ||||||||||||||||    
T  31767198 cttgtgtggttgttctagactcgatgtggacggtc-ccccaagcttccctcatgacccaaca 31767138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 11977297 - 11977435
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||| |||||||||| | ||||||||| ||||||||||||| || ||||||||||| | ||||||||||||||||||||||||| ||||||    
T  11977297 tgtcccacatcgggtaaaacagtaaatgttgaacaccttataagtaagagcactcataaacctaatgccttaaggttttgggtaagagtgtgatgtctct 11977396  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |||||| |||||||| |||||||||||||||||||    
T  11977397 cttgcaagtgcggttgttctagcctcgatgtggacggtc 11977435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 3537740 - 3537602
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| |||| |||||||||||| ||||||| |   ||||||||||||||||||||||||| |||||||    
T  3537740 tgtcccacatcggataaaatagtaaaggttgaacaccttatgagtaagaggacctataaacccattggcttaaggttttgggtaagagtgtggcgtctct 3537641  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||| |||||||| |||||||||||||||||||    
T  3537640 cttgcttgtgcggttgttctagcctcgatgtggacggtc 3537602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 34649455 - 34649593
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||   || | |||||||||||| | |||||||||||||||||||||| | |||||||    
T  34649455 tgtcccacatcggataaaagagtaaaggttgaacaccttataagtgcaagaacccataaacctaatgccttaaggttttgggtaagagtgaggcgtctct 34649554  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   | ||||||||||||| |||||||||||||||||||    
T  34649555 cttgctagtgtggttgttctagcctcgatgtggacggtc 34649593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 37850741 - 37850579
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tct 96  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||| | |||||||||||| |  ||||||||| || ||||||||||  |  |||    
T  37850741 tgtcccacatcgcataaaacagtagaggttgaacaccttataagtaagagaacccataaacctaatgttttaaggtttcggataagagtgtggtgtctct 37850642  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaac 161  Q
    |||||  ||| ||||| || ||||||||||||||||||| ||   |||||||||||||| |||||    
T  37850641 ctcacttgtgcggttgctctagcctcgatgtggacggtcccc--tagctcccctcatgatccaac 37850579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 37556128 - 37556260
Alignment:
Q  1 tgtcccacatcggataaaac-agtagaggttgaacacattataagtaagaggaccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||||||||||  |||| ||||||||||  |||||||||||||||||||||||| | || ||||||||||||||||||||||||  ||||||    
T  37556128 tgtcccacatcggataaaaatagtaaaggttgaacatcttataagtaagaggaccataaacccatagccttaaggttttgggtaagagtgtggtgtctct 37556227  T
Q  99 c--acaagtgtggttgttccagcctcgatgtgg 129  Q
    |   |  |||||||||||| |||||||||||||    
T  37556228 cttgcttgtgtggttgttcaagcctcgatgtgg 37556260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 3875472 - 3875308
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||||||||||| |||| |||||| |||| |||||||||||||||| |||||||| |  || |||||||||| ||||||| ||||  ||||||    
T  3875472 tgtcacacatcggataaaaaagtaaaggttgtacaccttataagtaagaggactcataaacccattgccttaaggttttaggtaagaatgtggagtctct 3875373  T
Q  99 caca--agtgtggttgttccagcctcgatgtggacggt-ctccaaaagctcccctcatgacccaaca 162  Q
    | ||  ||||||||||||| |||||||||||||||||| ||||   |||||||||||||||| ||||    
T  3875372 ctcactagtgtggttgttctagcctcgatgtggacggtcctcc--gagctcccctcatgacctaaca 3875308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41142389 - 41142528
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggt-aagagtgtgacgtctc 97  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||| |||| ||||||||| |  | ||||||||||| ||| ||||||||| ||||||    
T  41142389 tgtcccacatcggataaaacagtaaaggttgaacaccttataagtaaaaggacccataaacccattgccttaaggtttttggtaaagagtgtggcgtctc 41142488  T
Q  98 tc--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||   |  |||||||||||| |||||||||||||||||||    
T  41142489 tcttgcttgtgtggttgttctagcctcgatgtggacggtc 41142528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 2 - 129
Target Start/End: Original strand, 37555748 - 37555878
Alignment:
Q  2 gtcccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaa-cctaaagcttaaggttttgggtaagagtgtgacgtctctc- 99  Q
    |||||||||||||||||| |||  |||||||| |||||||||||||||||||| |||| ||| |  ||||||||||||||||||||||||  |||||||     
T  37555748 gtcccacatcggataaaatagtgaaggttgaatacattataagtaagaggaccttaaatccttagccttaaggttttgggtaagagtgtggtgtctctct 37555847  T
Q  100 -acaagtgtggttgttccagcctcgatgtgg 129  Q
      |  |||||||||||| |||||||||||||    
T  37555848 tgcttgtgtggttgttcaagcctcgatgtgg 37555878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 38804495 - 38804406
Alignment:
Q  2 gtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgt 89  Q
    ||||||||||| |||||| |||| ||||||||||||||||||||||||||| ||||||||| | || |||||||||||||||||||||||    
T  38804495 gtcccacatcgaataaaagagtaaaggttgaacacattataagtaagaggatccataaacccataaccttaaggttttgggtaagagtgt 38804406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 17294594 - 17294694
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  ||||||    
T  17294594 tgtcccacatcggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctct 17294693  T
Q  99 c 99  Q
    |    
T  17294694 c 17294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 34364524 - 34364624
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||||||||||| |||| ||||||||||| ||||||||||||||| || |||||| | || ||||||||||||||||||||||||| ||||||    
T  34364524 tgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccgtaaacccatagccttaaggttttgggtaagagtgtgatgtctct 34364623  T
Q  99 c 99  Q
    |    
T  34364624 c 34364624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 66229 - 66100
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggtt-gaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctc 97  Q
    |||| ||||||||||| || |||| ||||| |||||| ||||||||||||||||| |||||||||  || ||||||||||||||||||||||| || |||    
T  66229 tgtctcacatcggatagaaaagtaaaggtttgaacaccttataagtaagaggacccataaacctatggccttaaggttttgggtaagagtgtggcgcctc 66130  T
Q  98 tcacaagtgtggttgttccagcctcgatgt 127  Q
    ||||  || |||||||||  ||||||||||    
T  66129 tcacttgtatggttgttctggcctcgatgt 66100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 34364942 - 34365042
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||||||||||| | || ||||||||||| ||||||||||||||| ||||||||| | || ||||||||||||||||||||||||  ||||||    
T  34364942 tgtcacacatcggataaaataataaaggttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctct 34365041  T
Q  99 c 99  Q
    |    
T  34365042 c 34365042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 44290966 - 44290827
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggt-aagagtgtgacg--tc 95  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||| |||||||||  |  ||    
T  44290966 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaagagtgtggtgtatc 44290867  T
Q  96 tctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |||  |  ||| |||||||| |||||||||||||||||||    
T  44290866 tcttgcttgtgcggttgttctagcctcgatgtggacggtc 44290827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 3 - 165
Target Start/End: Original strand, 45084401 - 45084560
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaacctaaagcttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||   ||| |    |||||||||||||||||||| |||  |||||||       
T  45084401 tcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataacgt----cttaaggttttgggtaagagagtggtgtctctcttg 45084496  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaacattc 165  Q
    |  ||| |||||||| | |||||||| |||||||| ||  | ||| |||||||||||||||||||    
T  45084497 cttgtgcggttgttctaacctcgatgcggacggtc-ccccaggcttccctcatgacccaacattc 45084560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 5575121 - 5575252
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||| ||||||| || |||| ||||||||||| ||||||||||||||||| ||||| | | ||| |||||||||||| |||||||||| |||||||    
T  5575121 tgtcccacgtcggatagaagagtaaaggttgaacaccttataagtaagaggacctataaatccatagctttaaggttttggataagagtgtggcgtctct 5575220  T
Q  99 cacaagtgtggttgttccagcctcgatgtgga 130  Q
    | |   || ||| |||| ||||||||||||||    
T  5575221 ctcttatgaggtagttctagcctcgatgtgga 5575252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 26661663 - 26661525
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tct 96  Q
    ||||||||||||| ||||| |||| ||||||||||| |||||||| |||||| ||||||||  |  | ||||||||||||||||||||||||  |  |||    
T  26661663 tgtcccacatcgggtaaaagagtaaaggttgaacaccttataagtgagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctct 26661564  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||| |  |||||||||||| ||||||||| |||||||||    
T  26661563 ctcgcttgtgtggttgttcaagcctcgatatggacggtc 26661525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 41157008 - 41157161
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctc- 97  Q
    ||||||| | ||||||||| |||| ||||||||||| ||||||||||||||| ||||||||  |  || |||||||||||||||||||||||  |||||     
T  41157008 tgtcccataacggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcattgctttaaggttttgggtaagagtgtggtgtctct 41157107  T
Q  98 -tcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccct 150  Q
     |  |  |||||||||||| ||||||||||||| ||||| || || ||||||||    
T  41157108 attgcttgtgtggttgttctagcctcgatgtgggcggtcccccaaggctcccct 41157161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 162
Target Start/End: Complemental strand, 66605 - 66449
Alignment:
Q  9 atcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tctctcacaag 104  Q
    |||||||| || |||| ||||||||||| ||||||||||||||| |||||||| ||  | ||||||||||||||||||||| |  ||  |||||| |  |    
T  66605 atcggatagaaaagtaaaggttgaacaccttataagtaagaggatccataaacatatggccttaaggttttgggtaagagtatagcgtctctctcgcttg 66506  T
Q  105 tgtggttgttccagcctcgatgtggacgg-tctccaaaagctcccctcatgacccaaca 162  Q
    || |||||||| |||||| |||||||||| | |||  ||||||||||||||||||||||    
T  66505 tgcggttgttctagcctcaatgtggacggttatcc--aagctcccctcatgacccaaca 66449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3550737 - 3550837
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| |||| ||||||||||| |||||||||||||||| |||||||| |  | ||||| ||||||||||||||||||  ||||||    
T  3550737 tgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaagttttgggtaagagtgtggtgtctct 3550836  T
Q  99 c 99  Q
    |    
T  3550837 c 3550837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 22077636 - 22077536
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaac-ctaaagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| ||||||||||| || |||| ||||||||||| ||||||||||||||| |||||||| |  |  |||||||||||||||||||||||| |||||||    
T  22077636 tgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcgtagccttaaggttttgggtaagagtgtggcgtctct 22077537  T
Q  99 c 99  Q
    |    
T  22077536 c 22077536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 44290599 - 44290511
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagt 87  Q
    ||||||||||||||||||| |||| ||||||||||  ||||||||||||||| ||||||||| |  | |||||||||||||||||||||    
T  44290599 tgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagt 44290511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 48588629 - 48588474
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacca-taaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||||||||||| |||| ||||||||||| |||||||||||| ||||  ||||   |  || ||||||||||||||||||||| |  ||||||    
T  48588629 tgtccgacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccgtaaattcattgccttaaggttttgggtaagagtgcggtgtctct 48588530  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctca 152  Q
    |  ||  ||| |||||||| ||||||||||||||||||| || |||| ||||||||    
T  48588529 cttacttgtgcggttgttctagcctcgatgtggacggtcgcccaaagttcccctca 48588474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 50052164 - 50052064
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||  ||||||||||||||| |||||||||||    ||||| ||||||||||||||||||  ||||||    
T  50052164 tgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacctattttcttaaagttttgggtaagagtgtggtgtctct 50052065  T
Q  99 c 99  Q
    |    
T  50052064 c 50052064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 9955924 - 9956026
Alignment:
Q  1 tgtcccacatcggataaaaca-gtagaggttgaacacattataagtaagaggacc--ataaacctaaag-cttaaggttttgggtaagagtgtgacgtct 96  Q
    ||||||||||| ||||||| | ||| |||||||||||||||||||||||||||||   |||||| |  | ||||||||||||||||||||||||| ||||    
T  9955924 tgtcccacatcagataaaaaaagtaaaggttgaacacattataagtaagaggacccattaaaccaattgccttaaggttttgggtaagagtgtgatgtct 9956023  T
Q  97 ctc 99  Q
    |||    
T  9956024 ctc 9956026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 14318888 - 14319022
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    |||| |||||||||| |||| ||||||||||| |||||||||||| || ||||||| |||  | ||||||||||||||||||||||||  |||||||  |    
T  14318888 ccacgtcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaatctattgccttaaggttttgggtaagagtgtggtgtctctctta 14318987  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtc 135  Q
       ||| |||||||| |||||| ||||||||||||    
T  14318988 tttgtgcggttgttctagcctcaatgtggacggtc 14319022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 29798216 - 29798354
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| |||| |||||||| |||| ||||||||||| |||||||||||||||| |||||||| |  | |||||||| |||| ||||||||||  ||||||    
T  29798216 tgtcctacattggataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggtcttggataagagtgtggtgtctct 29798315  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   ||||||||||||||| | ||||||| | |||||||    
T  29798316 cttgcaagtgtggttgttctaacctcgatatagacggtc 29798354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 40082424 - 40082514
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||   |  | ||||||||||||||||||||||||    
T  40082424 tgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagaggatcataaattcattgccttaaggttttgggtaagagtgtg 40082514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 3537288 - 3537235
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  3537288 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 3537235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32594857 - 32594757
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||| ||||||| |||| ||||||||||| ||||||||||||||| ||||||||  |  | ||||||||||||||||||||||||  ||||||    
T  32594857 tgtcctacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtaagagtgtggtgtctct 32594758  T
Q  99 c 99  Q
    |    
T  32594757 c 32594757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 22077243 - 22077113
Alignment:
Q  9 atcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagct-taaggttttgggtaagagtgtgacgtct--ctcacaag 104  Q
    |||||||| || |||| |||||||| || ||||||||||||||||| ||||||  |  ||  ||||||||||| ||||||||||||||||  |||||       
T  22077243 atcggatagaaaagtaaaggttgaataccttataagtaagaggacccataaactcattgccctaaggttttggataagagtgtgacgtctccctcactta 22077144  T
Q  105 tgtggttgttccagcctcgatgtggacggtc 135  Q
    || |||||||| |||||||||||||||||||    
T  22077143 tgcggttgttcaagcctcgatgtggacggtc 22077113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 24600455 - 24600321
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacg--tct 96  Q
    ||||||| |||||||| || |||| |||||||||| |||||||||||||| || |||||||  |  | |||||||||||| |||||||||||  |  |||    
T  24600455 tgtcccatatcggatagaaaagtaaaggttgaacatattataagtaagagaactcataaactcattgtcttaaggttttgtgtaagagtgtggtgtctct 24600356  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggac 131  Q
    ||| | ||| ||||||||| |||||||||||||||    
T  24600355 ctcgctagtatggttgttctagcctcgatgtggac 24600321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41157392 - 41157530
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtc--t 96  Q
    ||||||||||| ||||||| |||| | ||||||||| ||||||||||||||| ||||||||| |  | ||| |||||||| |||||||||||  |||  |    
T  41157392 tgtcccacatcagataaaagagtaaaagttgaacaccttataagtaagaggacccataaacccattgcctttaggttttgagtaagagtgtggtgtctgt 41157491  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||  |  |||||||||||| ||||||||||||| |||||    
T  41157492 cttgcttgtgtggttgttctagcctcgatgtgggcggtc 41157530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41759500 - 41759638
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||||||||||| |||| | ||||||||| |||||||||||| || ||||||| | |  | ||||||||||||||||||||||||  ||||||    
T  41759500 tgtcacacatcggataaaatagtaaaagttgaacaccttataagtaagatgatccataaatccattgccttaaggttttgggtaagagtgtggtgtctct 41759599  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |   ||||||||||| ||||| |||||||||||||    
T  41759600 cttgcttatgtggttgttctagccttgatgtggacggtc 41759638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 22077961 - 22077832
Alignment:
Q  9 atcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagcttaaggttttgggtaagagtgtgacgtctct--cacaagt 105  Q
    |||||||| || | || ||||||||||  ||||||||||||||||| ||||||  | ||| |||||||| ||||||||||||| |||||||  |||   |    
T  22077961 atcggatagaaaaataaaggttgaacatcttataagtaagaggacccataaactcatagcctaaggtttggggtaagagtgtggcgtctctttcacttat 22077862  T
Q  106 gtggttgttccagcctcgatgtggacggtc 135  Q
    | |||||||| ||| |||||||||||||||    
T  22077861 gcggttgttcaagcatcgatgtggacggtc 22077832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 11977015 - 11977099
Alignment:
Q  54 cataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctc--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||||||||||| || |||||||||||||||||||||||  |||||||   |||||| ||| |||| |||||||||||||||||||    
T  11977015 cataaacctaatgccttaaggttttgggtaagagtgtggtgtctctcttgcaagtgcggtagttctagcctcgatgtggacggtc 11977099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 24132126 - 24131964
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtg-tgacgtctc 97  Q
    |||||| ||||||||| || |||| ||||||||||| |||||| |||| ||| ||||||||  |  || ||||||||| ||||||| ||| || | ||||    
T  24132126 tgtccctcatcggatagaaaagtaaaggttgaacaccttataaataaggggatccataaactcattgccttaaggttt-gggtaagtgtggtgtc-tctc 24132029  T
Q  98 tcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaacat 163  Q
    |||| ||||||||||||| ||||||||||| |||| |||||   ||| ||||||||||||||||||    
T  24132028 tcactagtgtggttgttctagcctcgatgtagacgatctcc-tgagcccccctcatgacccaacat 24131964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 41184566 - 41184513
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  41184566 tgtctcacatcggataaaatagtaaaggttgaacactttataagtaagaggacc 41184513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 5320102 - 5319943
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    |||||||||||| || |||| | ||||||||| |||||||| |||||| ||||||||  | || |||||||||||||||||||||||   |||||||       
T  5320102 ccacatcggatagaaaagtaaaagttgaacaccttataagtgagaggacccataaactcatagccttaaggttttgggtaagagtgtagtgtctctcttg 5320003  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |   ||||||||||| |||||| |||| ||||||| ||  |||||||| || ||||||||||    
T  5320002 cttatgtggttgttctagcctcaatgtagacggtcccc--aagctcccttcgtgacccaaca 5319943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22793295 - 22793396
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacc--taaagcttaaggttttgggtaagagtgtgacgtctc 97  Q
    |||||||||||| ||| || ||||||||||||| || |||||||| |||||| |||||||||  |    |||| ||||||| ||||||||||||||||||    
T  22793295 tgtcccacatcgtatagaaaagtagaggttgaaaactttataagtgagaggatccataaacccatttgccttacggttttgagtaagagtgtgacgtctc 22793394  T
Q  98 tc 99  Q
    ||    
T  22793395 tc 22793396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 26662037 - 26661939
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||| ||| ||||||| |||| ||||||||||| |||||||| ||| |||| ||||||| |  || |||||||||||||||||||||||  |||||||    
T  26662037 tcccatatcagataaaagagtaaaggttgaacaccttataagtgagaagacccataaaccgattgccttaaggttttgggtaagagtgtggtgtctctc 26661939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21378182 - 21378129
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    ||||||| |||||||| ||||||| |||||||| |  |||||||||||||||||    
T  21378182 tgtcccagatcggatagaacagtaaaggttgaatatcttataagtaagaggacc 21378129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 5528895 - 5528843
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac 53  Q
    |||| |||||||||||||| |||| ||||||||||  |||||| |||||||||    
T  5528895 tgtctcacatcggataaaagagtaaaggttgaacatcttataaataagaggac 5528843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 72; Significance: 9e-33; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 25327952 - 25328090
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| |||||||||||||||||| | ||||||||| ||||||||||||||| |||||||||||| | ||||||||||||||||||||||||  ||||||    
T  25327952 tgtcctacatcggataaaacagtaaaagttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaagagtgtggtgtctct 25328051  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   ||||||||||||||| |||||| ||||||||||||    
T  25328052 cttgcaagtgtggttgttctagcctcaatgtggacggtc 25328090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1028658 - 1028520
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtgacg--tct 96  Q
    |||||||||||||||| || |||| ||| ||||||| ||||||||||||||| ||||||||||| || ||||||||||| |||||||||||| ||  |||    
T  1028658 tgtcccacatcggatagaaaagtaaaggatgaacactttataagtaagaggacccataaacctataaccttaaggtttttggtaagagtgtggcgtctct 1028559  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |||||  ||| |||||||| |||||||||||||||||||    
T  1028558 ctcacttgtgcggttgttctagcctcgatgtggacggtc 1028520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 42405737 - 42405601
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||||||||||| |||| ||||||||||| ||| |||||| ||||| ||||||||||| || |||||||||||||||||||||||  ||||||    
T  42405737 tgtccaacatcggataaaatagtaaaggttgaacaccttacaagtaaaaggactcataaacctaatgccttaaggttttgggtaagagtgtggtgtctct 42405638  T
Q  99 cacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
      |  ||| |||||||| |||||||||||||||||||    
T  42405637 tgcttgtgcggttgttctagcctcgatgtggacggtc 42405601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 13415901 - 13415801
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||  |||| ||||||||||| ||||||||||||||| |||||||||||  | |||||||||||||||||||||||| |||||||    
T  13415901 tgtcccacatcggataaattagtaaaggttgaacaccttataagtaagaggacccataaacctattaccttaaggttttgggtaagagtgtggcgtctct 13415802  T
Q  99 c 99  Q
    |    
T  13415801 c 13415801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 26075303 - 26075168
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggt-aagagtgtgacgtctc 97  Q
    |||| |||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||| ||||||||| ||||||    
T  26075303 tgtctcacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaagagtgtgtcgtctc 26075204  T
Q  98 tc--acaagtgtggttgttccagcctcgatgtggac 131  Q
    ||   ||||||||||||||  |||||||||||||||    
T  26075203 tcttgcaagtgtggttgttttagcctcgatgtggac 26075168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 18603261 - 18603124
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | |||||||||||||||||||||||| | |||||    
T  18603261 tgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcatctct 18603162  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggt 134  Q
    |   |  ||||||| |||| ||||||||||||||||||    
T  18603161 cttgcttgtgtggtagttctagcctcgatgtggacggt 18603124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 32487411 - 32487573
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacg--tct 96  Q
    ||||||||||||||||||| |||| ||||||||||| | ||||||||||||||| ||||||| |  || ||||||||||||||||||||||||||  |||    
T  32487411 tgtcccacatcggataaaatagtaaaggttgaacacct-ataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtgacgtatct 32487509  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaac 161  Q
    ||  |   ||||||||||| |||||||||||||| |||| ||  ||||| ||| |||||||||||    
T  32487510 cttgcttatgtggttgttctagcctcgatgtggatggtc-ccccaagcttcccccatgacccaac 32487573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 299506 - 299605
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||| || ||||||||  | || |||||||||||| ||||||||||| |||||||    
T  299506 tgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagatgacccataaactcatagccttaaggttttgtgtaagagtgtggcgtctct 299605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 3295481 - 3295348
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||| ||||||||||||  |||||||       
T  3295481 ccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaccaattgccttaaggtttt-ggtaagagtgtgttgtctctcttg 3295383  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  |||||||||||| |||||||||||||||||||    
T  3295382 cttgtgtggttgttctagcctcgatgtggacggtc 3295348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 6500471 - 6500605
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    ||||||||||||||| |||| ||||||||||| |||||||||||||||||  |||||| |  | ||||||||||||||||||||||||  |||||||       
T  6500471 ccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacctttaaacccattgccttaaggttttgggtaagagtgtggtgtctctcttg 6500570  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  ||| |||||||| |||||||||||||||||||    
T  6500571 cttgtgcggttgttctagcctcgatgtggacggtc 6500605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 36492358 - 36492220
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaac-ctaaagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||| |||||| |   | ||| ||||||||| ||||||||||  ||||||    
T  36492358 tgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccaataaacacattacctttaggttttggataagagtgtggtgtctct 36492259  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  |||||||||||| |||||||||||||||||||    
T  36492258 cttgcttgtgtggttgttctagcctcgatgtggacggtc 36492220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 40296456 - 40296318
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| || | ||||||||||| ||||||||||||||| ||||||||| |  | ||| ||||||||||||||||||||  ||||||    
T  40296456 tgtcccacatcggataaaatagaaaaggttgaacaccttataagtaagaggacccataaacccattgccttgaggttttgggtaagagtgtggtgtctct 40296357  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||| |||||||| |||||||||||||||||||    
T  40296356 cttgcttgtgcggttgttctagcctcgatgtggacggtc 40296318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 624213 - 624350
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tct 96  Q
    |||||||||| | |||||| |||| ||||||||||| |||||||||||| || ||||||||| | || ||| ||||||||||||||||||||  |  |||    
T  624213 tgtcccacattgtataaaatagtaaaggttgaacacgttataagtaagatgacccataaacccatagccttgaggttttgggtaagagtgtggtgtctct 624312  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggt 134  Q
    |||||  ||| |||||||| ||||||||||||||||||    
T  624313 ctcacttgtggggttgttctagcctcgatgtggacggt 624350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 27502177 - 27502013
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||| |||||||| |||| ||||| ||||| ||||||||||||||| |||||||||||  | |||||| |||| ||||| ||||||  ||||||    
T  27502177 tgtcccacattggataaaatagtaaaggttaaacaccttataagtaagaggacccataaacctattgccttaagatttttggtaaaagtgtggtgtctct 27502078  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |   |  |||||||||||| | ||||||||||||||||| ||   |||||||||||||||||||||    
T  27502077 cttgcttgtgtggttgttctatcctcgatgtggacggtc-cccctagctcccctcatgacccaaca 27502013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 34753166 - 34753003
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||| ||||| || |||| | ||||||||| |||||||||||| |||| ||||||| |  || ||||||||||||||||||||||| |||||||    
T  34753166 tgtcccacattggatagaaaagtaaaagttgaacaccttataagtaagaagacccataaaccgattgccttaaggttttgggtaagagtgtggcgtctct 34753067  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |   |  ||| |||||||| |||||||||||||||||| |||  ||||||||| ||||||||||||    
T  34753066 cttgcttgtgcggttgttctagcctcgatgtggacggtttcc-caagctcccc-catgacccaaca 34753003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 9 - 129
Target Start/End: Original strand, 26074637 - 26074761
Alignment:
Q  9 atcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tctctcacaag 104  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  |  |||||||| ||    
T  26074637 atcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctctcactag 26074736  T
Q  105 tgtggttgttccagcctcgatgtgg 129  Q
    |||||||| || | |||||||||||    
T  26074737 tgtggttgctctaacctcgatgtgg 26074761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 26074923 - 26074822
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggt-aagagtgtgacgtctc 97  Q
    ||||||||||||||||||| |||| |||||||||||| |||||||| ||||| |||||||||||  | ||||||||||||||| ||||||||| ||||||    
T  26074923 tgtcccacatcggataaaagagtaaaggttgaacacaatataagtaggaggacccataaacctattgtcttaaggttttgggtaaagagtgtggcgtctc 26074824  T
Q  98 tc 99  Q
    ||    
T  26074823 tc 26074822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 15370116 - 15370254
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||| |||||| |||| ||||||||||  ||||||||||||||| ||||||| | | || ||||||||||||||||||||||||  ||||||    
T  15370116 tgtcccacatcgaataaaatagtaaaggttgaacatcttataagtaagaggacccataaatccacagccttaaggttttgggtaagagtgtggtgtctct 15370215  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||| | |||||| |||||||||||||||||||    
T  15370216 cttgcttgtgggattgttctagcctcgatgtggacggtc 15370254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 10 - 162
Target Start/End: Original strand, 15370428 - 15370583
Alignment:
Q  10 tcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--acaagt 105  Q
    |||||| |||||||| | ||||||||| ||||||||||||||| ||||||||| | || |||||||||||| ||||||||||| ||||||||      ||    
T  15370428 tcggatgaaacagtaaatgttgaacaccttataagtaagaggacccataaacccatagccttaaggttttgcgtaagagtgtggcgtctctcttgtttgt 15370527  T
Q  106 gtggttgttccagcctcgatgtggacggt-ctccaaaagctcccctcatgacccaaca 162  Q
    | |||||||| |||||||||||||||||| ||||  | |||||||||||| |||||||    
T  15370528 ggggttgttctagcctcgatgtggacggtcctcc--atgctcccctcatgtcccaaca 15370583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 41170651 - 41170742
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||||||||||||||||| |||| ||||||||||  ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||    
T  41170651 tgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 41170742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 35150024 - 35150157
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tctc 97  Q
    ||||||||||||||||||| |||  ||||||||||| |||||||||||||  ||||||| | |  | ||||||||||||||||| ||||||  |  ||||    
T  35150024 tgtcccacatcggataaaagagtcaaggttgaacaccttataagtaagagacccataaatccattgtcttaaggttttgggtaaaagtgtggtgtctctc 35150123  T
Q  98 tcacaagtgtggttgttccagcctcgatgtggac 131  Q
    |||| ||||||||||||| | |||| ||||||||    
T  35150124 tcactagtgtggttgttctaacctcaatgtggac 35150157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 91
Target Start/End: Complemental strand, 11417114 - 11417026
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtga 91  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | |||||||||||| ||||||||||||    
T  11417114 ccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaggttttgtgtaagagtgtga 11417026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 36568708 - 36568572
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacca-taaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||||||| || |||| | ||||||||| |||||||| ||| ||||  |||||| |  || |||||||||| |||||||||||| |||||||    
T  36568708 tgtcccacatcggatagaaaagtaaaagttgaacaccttataagtgagatgacccgtaaacccattgccttaaggtttttggtaagagtgtggcgtctct 36568609  T
Q  99 cacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    | |  |||||||||||| | |||||||||||| ||||    
T  36568608 ctcttgtgtggttgttctatcctcgatgtggaaggtc 36568572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 41632799 - 41632899
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| ||||||||||| || |||| ||||||||||| ||||||||||||||| ||||||||| || || ||||| |||||||||||||||||  ||||||    
T  41632799 tgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccaatgctttaagattttgggtaagagtgtggtgtctct 41632898  T
Q  99 c 99  Q
    |    
T  41632899 c 41632899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 21 - 130
Target Start/End: Complemental strand, 26591031 - 26590918
Alignment:
Q  21 agtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tctctcacaagtgtggttgttcc 116  Q
    |||| ||||||||||| ||||||||||||||| |||||||   || | |||||||||||| ||||||||||| ||  |||||||| |||||||||||||     
T  26591031 agtaaaggttgaacaccttataagtaagaggatccataaattcaatgccttaaggttttgagtaagagtgtggcgtctctctcactagtgtggttgttct 26590932  T
Q  117 agcctcgatgtgga 130  Q
    | ||||||||||||    
T  26590931 aacctcgatgtgga 26590918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 131
Target Start/End: Complemental strand, 35167974 - 35167845
Alignment:
Q  6 cacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctcaca- 102  Q
    |||||| ||||||| |||| ||||||||||| ||||||||| || |||| ||||| |||  || || | ||||| ||||||||||||| ||||||||||     
T  35167974 cacatcagataaaagagtaaaggttgaacaccttataagtaggatgacccataaatctattgccttgatgtttttggtaagagtgtgatgtctctcacac 35167875  T
Q  103 -agtgtggttgttccagcctcgatgtggac 131  Q
     ||||||||||||| ||| |||||||||||    
T  35167874 tagtgtggttgttctagcatcgatgtggac 35167845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 26074287 - 26074155
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacg--tct 96  Q
    |||| |||||||||||||| |||| ||||||||||| | ||| ||||||||||| || |||| |  || |||||||||||||||||||||||  |  |||    
T  26074287 tgtcacacatcggataaaaaagtaaaggttgaacacctcatatgtaagaggacccatgaacccattgccttaaggttttgggtaagagtgtggtgtctct 26074188  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtgg 129  Q
    ||||| |||||||||| || | |||||||||||    
T  26074187 ctcactagtgtggttgctctaacctcgatgtgg 26074155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3295156 - 3295056
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||| || ||||||||| |  | ||| |||||||||||| |||||||  ||||||    
T  3295156 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaagacccataaacccattgccttgaggttttgggtatgagtgtggtgtctct 3295057  T
Q  99 c 99  Q
    |    
T  3295056 c 3295056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 39309701 - 39309761
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaacc 61  Q
    |||||||||||||||||||  ||| | |||||||||||||||| |||||||||||||||||    
T  39309701 tgtcccacatcggataaaagggtaaatgttgaacacattataaataagaggaccataaacc 39309761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 6224213 - 6224304
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    |||||||| |||||||||| |||| ||||||||||| ||||||||||||||| ||||||||  |  | ||||||||||| ||||||||||||    
T  6224213 tgtcccacttcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaactcatcgccttaaggtttttggtaagagtgtg 6224304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 6500843 - 6500977
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    ||||||||||||||| |||| ||||||||||| |||||| ||| |||| ||||||||  |  | ||||||||||||| ||||||||||  |||||||  |    
T  6500843 ccacatcggataaaatagtaaaggttgaacaccttataaataaaaggacccataaactcattgccttaaggttttggataagagtgtggtgtctctctta 6500942  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  ||| |||| ||| |||||||||||||||||||    
T  6500943 cttgtgcggttattctagcctcgatgtggacggtc 6500977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 67 - 162
Target Start/End: Original strand, 42435512 - 42435609
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacgtctctcaca--agtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    ||||||||||||  | ||||||||| ||||||| ||  ||||||||||||| ||| |||||||||||||||  | |||||||||||| | ||||||||    
T  42435512 cttaaggttttgaatcagagtgtgatgtctctctcataagtgtggttgttctagcatcgatgtggacggtccaccaaagctcccctcgtaacccaaca 42435609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 9498795 - 9498695
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||| |||| || |||| ||||||||||| ||||||||||||||| ||||||||| |  | |||||| |||||||||||||||||  ||||||    
T  9498795 tgtctcacatcagatagaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttgggtaagagtgtggtgtctct 9498696  T
Q  99 c 99  Q
    |    
T  9498695 c 9498695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 623835 - 623973
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tct 96  Q
    |||| ||||||||||| || |||| ||||||||||| ||| |||||||  || |||||||| || || |||||||||||| |||||||||||  |  |||    
T  623835 tgtctcacatcggatataatagtaaaggttgaacactttacaagtaagttgagccataaacttatagccttaaggttttgagtaagagtgtggtgtctct 623934  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |||||  ||| |||||||| |||||| |||| |||||||    
T  623935 ctcacttgtggggttgttctagcctcaatgtagacggtc 623973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 300976 - 301025
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagag 50  Q
    ||||||||||| |||||||||||| |||||||| || |||||||||||||    
T  300976 tgtcccacatcagataaaacagtaaaggttgaataccttataagtaagag 301025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12662793 - 12662745
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaaga 49  Q
    ||||||||||||||||||| |||| ||||||||||  ||||||||||||    
T  12662793 tgtcccacatcggataaaatagtaaaggttgaacattttataagtaaga 12662745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 33747788 - 33747848
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaac 60  Q
    ||||||||||||||||||| |||| ||||| || || ||||||||||||||| ||||||||    
T  33747788 tgtcccacatcggataaaatagtaaaggttaaatactttataagtaagaggatccataaac 33747848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 130
Target Start/End: Original strand, 38427632 - 38427697
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacg--tctctcacaagtgtggttgttccagcctcgatgtgga 130  Q
    |||||||||||| ||||||||||||||  ||||||||  ||| |||||||| | ||||||||||||    
T  38427632 cttaaggttttgtgtaagagtgtgacgtctctctcacttgtgcggttgttctaacctcgatgtgga 38427697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 5723932 - 5723883
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagag 50  Q
    ||||||||||||||||||| | || | ||||||||||||||| |||||||    
T  5723932 tgtcccacatcggataaaataataaaagttgaacacattatatgtaagag 5723883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 35914866 - 35914919
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||| |||||||||||||| |||| ||||||||||  |||||||||||| ||||    
T  35914866 tgtcacacatcggataaaagagtaaaggttgaacattttataagtaagaagacc 35914919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 36522037 - 36521937
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| |||| || ||| ||||||||||||  | ||| | |||||| ||||||||| |  | |||||||||||||||||||||||| | |||||    
T  36522037 tgtcccacatcagatagaaaagttgaggttgaacactctttaaatgagaggacccataaaccaattgccttaaggttttgggtaagagtgtgtcatctct 36521938  T
Q  99 c 99  Q
    |    
T  36521937 c 36521937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 35)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2580013 - 2579850
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||| | || ||||||||||||||||||| ||||  ||||||    
T  2580013 tgtcccacatcggataaaagagtaaaggttgaacacattataagtaagaggacccataaacccacagccttaaggttttgggtaagaatgtggtgtctct 2579914  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |   |  ||| |||||||| |||||||||||||| |||| ||  ||||||||||||| ||||||||    
T  2579913 cttgcttgtgcggttgttctagcctcgatgtggaaggtcccc--aagctcccctcattacccaaca 2579850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 16454924 - 16455062
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| |||| ||||||||||| |||||||||| |||| |||||||||||  | |||||||||||||||||||||||| |||||||    
T  16454924 tgtcccacatcagataaaagagtaaaggttgaacaccttataagtaataggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctct 16455023  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||| |||||||| |||||||||||||||||||    
T  16455024 cttgcttgtgcggttgttctagcctcgatgtggacggtc 16455062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 29518520 - 29518658
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  ||||||    
T  29518520 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctct 29518619  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||| |||||||| |||||||||||||||||||    
T  29518620 cttgcttgtgcggttgttctagcctcgatgtggacggtc 29518658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 29518937 - 29519075
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  ||||||    
T  29518937 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctct 29519036  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||| |||||||| |||||||||||||||||||    
T  29519037 cttgcttgtgcggttgttctagcctcgatgtggacggtc 29519075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32741196 - 32741334
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  ||||||    
T  32741196 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttgggtaagagtgtggtgtctct 32741295  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||| |||||||| |||||||||||||||||||    
T  32741296 cttgcttgtgcggttgttctagcctcgatgtggacggtc 32741334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 2 - 130
Target Start/End: Complemental strand, 10074503 - 10074371
Alignment:
Q  2 gtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||||||| || |||| ||||||||||| ||||||||||||||||| ||||||  |  || |||||||||||||||||||||||  |||||||    
T  10074503 gtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctctc 10074404  T
Q  100 aca--agtgtggttgttccagcctcgatgtgga 130  Q
     ||  ||||||||||||| ||||||||||||||    
T  10074403 tcactagtgtggttgttctagcctcgatgtgga 10074371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 14748479 - 14748345
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| |||||| |||||||| ||||||||  |  || |||||||||||||||||||||||  ||||||    
T  14748479 tgtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggacccataaactcattgcgttaaggttttgggtaagagtgtg--gtctct 14748382  T
Q  99 cacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
      |  |||||||||||| |||||||||||||||||||    
T  14748381 tgcttgtgtggttgttctagcctcgatgtggacggtc 14748345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 1950326 - 1950226
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||| ||||||||||| ||||||| |||| | |||||||||||| |||||||||||||||||||    
T  1950326 tgtcccacatcggataaaagagtaaaggttgaacaccttacaagtaagaggagccataaatctaatgccttaaggttttgagtaagagtgtgacgtctct 1950227  T
Q  99 c 99  Q
    |    
T  1950226 c 1950226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 160
Target Start/End: Complemental strand, 5832167 - 5832007
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagcttaaggttttgggtaagagtgtgacgtctctc 99  Q
    |||||||||| |||||||| |||| ||||||||||| ||||||||||||||| ||||||| | |   |||||| |||||||||| ||||||  |||||||    
T  5832167 tgtcccacattggataaaagagtaaaggttgaacaccttataagtaagaggacccataaagccaccccttaagattttgggtaaaagtgtggtgtctctc 5832068  T
Q  100 --acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaa 160  Q
      ||  |||||||||||| ||||||||||| ||||||| ||  | ||||||||||||||||||    
T  5832067 ttacttgtgtggttgttctagcctcgatgtagacggtcccc--aggctcccctcatgacccaa 5832007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2578583 - 2578420
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctc- 97  Q
    ||||||||| ||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| | || ||||||||||||||||||||||||  |||||     
T  2578583 tgtcccaca-cggataaaagagtaaaggttgaacactttataagtaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctct 2578485  T
Q  98 -tcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
     |  |  ||| |||||||| ||||||||||||||||||| ||   ||| |||||||||||||||||    
T  2578484 tttgcttgtgcggttgttctagcctcgatgtggacggtc-cccctagcccccctcatgacccaaca 2578420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 26544066 - 26544166
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | |||||||||||| |||||||||||| ||||||    
T  26544066 tgtcccacatcggataaaatagtaaaggttgaacacgttataagtaagaggacccataaacccaccgccttaaggttttgagtaagagtgtgatgtctct 26544165  T
Q  99 c 99  Q
    |    
T  26544166 c 26544166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 2378143 - 2378281
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||| ||||||| ||||  ||||||    
T  2378143 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattaccttaaggttttaggtaagaatgtggtgtctct 2378242  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  | |||||||||| |||||||||||||||||||    
T  2378243 cttgcttgagtggttgttctagcctcgatgtggacggtc 2378281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 3 - 99
Target Start/End: Original strand, 1127379 - 1127477
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaaccta-aagcttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||| ||||| |||| ||||||||||| |||||||||||||||| |||||||| |  | |||||||||||||||||||||||| ||||||||    
T  1127379 tcccacatcgggtaaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctctc 1127477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 92
Target Start/End: Complemental strand, 32460721 - 32460628
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgac 92  Q
    |||||||||||| |||||| |||| ||||||||||| |||||||||||||||| |||||||| |  | ||||||||||||||||||||||||||    
T  32460721 tgtcccacatcgtataaaatagtaaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtgac 32460628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3058243 - 3058343
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||| ||||| ||||||||| |  | ||||||||||||||||||||||||  ||||||    
T  3058243 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtatgaggatccataaacccattgccttaaggttttgggtaagagtgtggtgtctct 3058342  T
Q  99 c 99  Q
    |    
T  3058343 c 3058343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 10073755 - 10073619
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||||| ||||  ||| ||||||||||| ||||||||||||||| ||||||||  |  | |||||| |||||||||||||||||  ||||||    
T  10073755 tgtcccacatcggagaaaa--gtaaaggttgaacaccttataagtaagaggatccataaactcattggcttaagattttgggtaagagtgtggtgtctct 10073658  T
Q  99 caca--agtgtggttgttccagcctcgatgtggacggtc 135  Q
    | ||  ||||||||||||| ||| |||||||||||||||    
T  10073657 ctcactagtgtggttgttctagcatcgatgtggacggtc 10073619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 593850 - 593759
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||||| |  | ||||||||||||||||| ||||||    
T  593850 tgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaaccgactgccttaaggttttgggtaatagtgtg 593759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 2377771 - 2377862
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||||||||||| ||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||    
T  2377771 tgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 2377862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 67 - 159
Target Start/End: Complemental strand, 12085107 - 12085014
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacg--tctctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgaccca 159  Q
    |||||||||||||||||||||||| ||  ||||||||  |||||||||||| |||||||||| | |||||||||  |||||||||||||||||||    
T  12085107 cttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatgcgaacggtctcc-taagctcccctcatgaccca 12085014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 6999937 - 6999796
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||||||||||| |||| | ||||||||| ||||| ||||||||| ||||||||  |  || |||||||||||| |||||||||| |||||||    
T  6999937 tgtcctacatcggataaaaaagtaaaagttgaacaccttatatgtaagaggatccataaactcactgccttaaggttttggataagagtgtggcgtctct 6999838  T
Q  99 ca--caagtgtggttgttccagcctcgatgtggacggtctcc 138  Q
    |   | | ||||||||||| || |||||||||||||||||||    
T  6999837 cttgctaatgtggttgttctagtctcgatgtggacggtctcc 6999796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 12071764 - 12071668
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacg--tctctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |||||||||||||||||||||||| ||  ||||||||  |||||||||||| |||||||||||| |||||| ||  ||||||||||||||||| ||||    
T  12071764 cttaaggttttgggtaagagtgtggcgtctctctcacttgtgtggttgttctagcctcgatgtgaacggtc-ccctaagctcccctcatgacctaaca 12071668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 16454592 - 16454756
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| | || | ||||||||| ||||||||||||||| ||||||||| |  | |||||| |||||| |||||||||| |||||||    
T  16454592 tgtcccacatcagataaaagaataaaagttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggcgtctct 16454691  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |   |  ||| |||||||| ||||||||||||||||||| ||   |||||||||| ||||||||||    
T  16454692 cttgcttgtgcggttgttctagcctcgatgtggacggtc-ccccgagctcccctcgtgacccaaca 16454756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3409276 - 3409376
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||||||||||| ||||||||  |  | ||||||||||||||||||||||||  ||||||    
T  3409276 tgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctct 3409375  T
Q  99 c 99  Q
    |    
T  3409376 c 3409376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 99
Target Start/End: Original strand, 16107700 - 16107795
Alignment:
Q  6 cacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    |||||||||||||| |||| ||||| ||||| |||||||||||||||| |||||||| |  | ||||||||||||||||||||||||  |||||||    
T  16107700 cacatcggataaaaaagtaaaggttaaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggtgtctctc 16107795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 35210221 - 35210312
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    |||| |||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||| | |  | ||||||||||||||||||||||||    
T  35210221 tgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaaaccattgccttaaggttttgggtaagagtgtg 35210312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 1846765 - 1846903
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctc- 97  Q
    |||| |||||||||||||| |||| ||||||||||| ||||||||||||| | ||||||| | |  | ||||||||||||| ||||||||||  |||||     
T  1846765 tgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagcacccataaatccattgccttaaggttttggataagagtgtggtgtctct 1846864  T
Q  98 -tcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
     |  |  ||| |||||||| |||||||||||||||||||    
T  1846865 tttgcttgtgcggttgttctagcctcgatgtggacggtc 1846903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 2579246 - 2579087
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaacctaaagctt-aaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||||||||||| |||| | ||||||||| |||||||  || | |||||||||| | | ||| |||| ||||| ||||||||||  |||||||    
T  2579246 tgtcccacatcggataaaagagtaaaagttgaacaccttataag--ag-gaaccataaacccataactttaaggctttggctaagagtgtggtgtctctc 2579150  T
Q  100 a--caagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
       |  |||||||||||| |||||||||||| |||||| ||   |||||||||||||||||||||    
T  2579149 ttgctcgtgtggttgttctagcctcgatgtgcacggtcccc--gagctcccctcatgacccaaca 2579087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 6 - 162
Target Start/End: Original strand, 2843576 - 2843736
Alignment:
Q  6 cacatcggataaaacagtagaggttgaacacattataagtaagagga--ccataaacctaaag-cttaaggttttgggtaagagtgtg--acgtctctca 100  Q
    |||||||||||||| | || | ||||||||| |||||||||||||||  ||||||||  |  | ||||||||||||||||||||||||  |  |||||      
T  2843576 cacatcggataaaataataaaagttgaacaccttataagtaagaggaccccataaactcattgccttaaggttttgggtaagagtgtggtatctctcttg 2843675  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |  | |||||||||| ||||||||||||||||||| ||  || |||||||||||| ||||||    
T  2843676 cttgagtggttgttctagcctcgatgtggacggtccccctaa-ctcccctcatgatccaaca 2843736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 99
Target Start/End: Complemental strand, 10074130 - 10074032
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    |||||||||||||| || |||| | ||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||| ||||||  |||||||    
T  10074130 tcccacatcggatagaaaagtaaacgttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaaaagtgtggtgtctctc 10074032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 3415475 - 3415575
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||  |||||| |||| |||||||||||  |||||||||||||| ||||||||| |  | ||||||||||| ||||||||||||  ||||||    
T  3415475 tgtcccacatcacataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgccttaaggtttttggtaagagtgtggtgtctct 3415574  T
Q  99 c 99  Q
    |    
T  3415575 c 3415575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 9062490 - 9062438
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac 53  Q
    ||||||||||||||||||| |||| ||||||||||  ||||||||||||||||    
T  9062490 tgtcccacatcggataaaatagtaaaggttgaacatcttataagtaagaggac 9062438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 132
Target Start/End: Complemental strand, 5958738 - 5958613
Alignment:
Q  7 acatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctcacaag 104  Q
    |||||||||||||||||| ||||||||||| |||||| |||||| || |||||||  |  | ||||| ||||||||  ||||||||| ||||||  |  |    
T  5958738 acatcggataaaacagtaaaggttgaacaccttataaataagagaactcataaactcattgtcttaaagttttgggatagagtgtgatgtctct--cttg 5958641  T
Q  105 tgtggttgttccagcctcgatgtggacg 132  Q
    |||| |||||| | ||||||||||||||    
T  5958640 tgtgattgttctaacctcgatgtggacg 5958613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 54
Target Start/End: Original strand, 35210498 - 35210548
Alignment:
Q  4 cccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||||||||||||||| |||| |||||||| || || ||||||||||||||    
T  35210498 cccacatcggataaaatagtaaaggttgaataccttgtaagtaagaggacc 35210548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 16108084 - 16108133
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    ||||||| ||||||| |||| | ||||||||| |||||||||||||||||    
T  16108084 ccacatcagataaaagagtaaatgttgaacaccttataagtaagaggacc 16108133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12092623 - 12092563
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaac 60  Q
    |||||||||||||||| || ||| |||||||| ||| |||||||| |||||| ||||||||    
T  12092623 tgtcccacatcggatagaaaagtggaggttgagcactttataagtgagaggatccataaac 12092563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 14745808 - 14745674
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||| |||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | |||||||||||||||||||||||| |||||||    
T  14745808 tgtcccacattggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctct 14745709  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggac 131  Q
    |   ||||||||||||||| |||||||||||||||    
T  14745708 cttgcaagtgtggttgttctagcctcgatgtggac 14745674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 36178746 - 36178611
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  ||||||    
T  36178746 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctct 36178647  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacg 132  Q
    |   |  |||||||||||| |||||| |||||||||    
T  36178646 cttgcttgtgtggttgttctagcctctatgtggacg 36178611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 6422127 - 6422261
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| |||| |||||||||||||||||| |||||||| ||||||||| | || ||||||||||| ||||||||||||  ||||||    
T  6422127 tgtcccacatcagataaaaaagtaaaggttgaacacattataattaagaggacccataaacccatagccttaaggttttaggtaagagtgtggtgtctct 6422226  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggac 131  Q
    |   |  |||||||||||| |||||||||||||||    
T  6422227 cttgcttgtgtggttgttctagcctcgatgtggac 6422261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 962615 - 962756
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgt--ct 96  Q
    |||||||||||||||| || |||| ||||||||||| |||||||| |||||| ||||||||| |  | ||||||||||||||||||||||||  ||  ||    
T  962615 tgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgagaggacccataaacccattgtcttaaggttttgggtaagagtgtgttgtcact 962714  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtctcc 138  Q
    ||  |  |||||||||||| ||||||||||||||||||||||    
T  962715 cttgcttgtgtggttgttctagcctcgatgtggacggtctcc 962756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 35580864 - 35580727
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||||||||||||| || | ||||||||| |||||||| ||||||||||||||| |  | |||||||||||||||||||||| | ||||||||    
T  35580864 tgtcccacatcggataaaacaataaatgttgaacaccttataagtgagaggaccataaacccattgccttaaggttttgggtaagagtgcggcgtctctc 35580765  T
Q  100 --acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
          ||| |||||||| |||||||||||||||||||    
T  35580764 ttgtttgtggggttgttctagcctcgatgtggacggtc 35580727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 38796761 - 38796621
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagag--tgtgacgtct 96  Q
    ||||||||||| ||||||||| || ||||||||||| ||||||||||||||| |||||||||||| | ||||||||||||||||||||  |||| |||||    
T  38796761 tgtcccacatctgataaaacaataaaggttgaacaccttataagtaagaggacccataaacctaatgccttaaggttttgggtaagagtatgtggcgtct 38796662  T
Q  97 c--tcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  |  |  |||||||||||| ||||||||||| |||||||    
T  38796661 ctattgcttgtgtggttgttcaagcctcgatgtcgacggtc 38796621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 42514666 - 42514830
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||| |||| || |||| ||||||||||| ||||||||||||||| ||||||||| |  | |||||| ||||||||||||||||| |||||||    
T  42514666 tgtcctacatcagatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccatcgccttaagattttgggtaagagtgtggcgtctct 42514765  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |  ||  ||| |||||||| ||||||||||||||||||| ||   |||||||||| ||||||||||    
T  42514766 cttacttgtggggttgttctagcctcgatgtggacggtc-ccccgagctcccctcgtgacccaaca 42514830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 15880284 - 15880380
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | |||||||||||||||||||||||| ||||||||    
T  15880284 ccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctctc 15880380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 5543139 - 5543002
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctc- 97  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||||||||||| |||||||||||  | |||||| |||||||||||||||||  |||||     
T  5543139 tgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggatccataaacctattgccttaagattttgggtaagagtgtggtgtctct 5543040  T
Q  98 -tcacaagtgtggttgttccagcctcgatgtggacggt 134  Q
     |  |  ||| |||||||| ||||||||||||||||||    
T  5543039 attgcttgtgcggttgttcaagcctcgatgtggacggt 5543002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 6421402 - 6421566
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||||||| |||||||  |  | ||| ||||||||||||||||||||  ||||||    
T  6421402 tgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttgaggttttgggtaagagtgtggtgtctct 6421501  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |   |  ||| |||||||| || |||||||||||||||| ||   |||||||||| ||||||||||    
T  6421502 cttgcttgtgcggttgttctagtctcgatgtggacggtc-ccccgagctcccctcgtgacccaaca 6421566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 6712993 - 6713094
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaagg-ttttgggtaagagtgtgacgtctc 97  Q
    |||| ||||||||||||||||||| | ||||||||| ||||||||||||||| |||||||||||  || |||||| |||||||||||||||||| |||||    
T  6712993 tgtctcacatcggataaaacagtaaatgttgaacaccttataagtaagaggacccataaacctattgctttaaggtttttgggtaagagtgtgatgtctc 6713092  T
Q  98 tc 99  Q
    ||    
T  6713093 tc 6713094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Complemental strand, 37632738 - 37632602
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagctt-aaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||||||||||| |||| |||||  |||  ||||||||||||||||| ||||||| | | ||| |||||||||||||||||||||  || |||    
T  37632738 tgtcctacatcggataaaatagtaaaggtttgacattttataagtaagaggacccataaacccataactttaaggttttgggtaagagtgtggtgtatct 37632639  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacgg 133  Q
    |  ||||||||| |||||| |||||||||||||||||    
T  37632638 cttacaagtgtgattgttctagcctcgatgtggacgg 37632602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 40733534 - 40733634
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| |||| | ||||||||| ||||||||||||||| ||||||||||| || ||||| ||||||||||||||||||  ||||||    
T  40733534 tgtcccacatcagataaaaaagtaaatgttgaacaccttataagtaagaggacccataaacctacaaccttaaagttttgggtaagagtgtggtgtctct 40733633  T
Q  99 c 99  Q
    |    
T  40733634 c 40733634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 5542766 - 5542628
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||| |||| |||||| |||| ||||||||||| ||||||||||||||| |||||||||||  | ||||||||||| ||||||||||||  ||||||    
T  5542766 tgtcccatatcgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacctattgccttaaggtttttggtaagagtgtggtgtctct 5542667  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||| |||||||| || ||||||||||||||||    
T  5542666 cttgcttgtgcggttgttcaagtctcgatgtggacggtc 5542628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 37106205 - 37106296
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtg 90  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |    ||||||||||||||||||||||||    
T  37106205 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccatttccttaaggttttgggtaagagtgtg 37106296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 41283616 - 41283478
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||| ||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||  |  | ||||||||||| |||||||||||| |||||||    
T  41283616 tgtcccatatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaggttttaggtaagagtgtggcgtctct 41283517  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |      |||||||||||| ||||| |||||||||||||    
T  41283516 cttgtttgtgtggttgttctagccttgatgtggacggtc 41283478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 15511636 - 15511501
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||| ||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | |||||| |||||||||||||||||  ||||||    
T  15511636 tgtcacacaacggataaaagagtaaaggttgaacacgttataagtaagaggacccataaacccattgtcttaagattttgggtaagagtgtggtgtctct 15511537  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacg 132  Q
    |   |  |||||||||||| || |||||||||||||    
T  15511536 cttgcttgtgtggttgttctagtctcgatgtggacg 15511501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38796359 - 38796295
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaa 64  Q
    |||||||||||||||||||||||| | ||||||||| ||||||||||||||||| ||||||||||    
T  38796359 tgtcccacatcggataaaacagtaaatgttgaacaccttataagtaagaggacctataaacctaa 38796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 6 - 87
Target Start/End: Original strand, 33731670 - 33731753
Alignment:
Q  6 cacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagt 87  Q
    |||||||||||||| |||| ||||||| ||| ||||||||||||||| |||||||||||  | |||||||||||||||||||||    
T  33731670 cacatcggataaaagagtaaaggttgagcaccttataagtaagaggatccataaacctattgccttaaggttttgggtaagagt 33731753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 40679770 - 40679632
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||| |||||||| || ||||  |||||||||| ||||||||||||| | ||||||||| |  | |||||| ||||||||||||||||| |||||||    
T  40679770 tgtcccatatcggatagaaaagtaagggttgaacaccttataagtaagagaacccataaacccatcgccttaagattttgggtaagagtgtggcgtctct 40679671  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  ||  ||| |||||||| || ||||||||||||||||    
T  40679670 cttacttgtggggttgttctagtctcgatgtggacggtc 40679632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 67 - 161
Target Start/End: Original strand, 6421816 - 6421911
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacgtctctc--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaac 161  Q
    ||||||||||||||||||||||||  |||||||  ||  ||||||||||||  |||||||||||||||||| ||   ||||||||||||||||||||    
T  6421816 cttaaggttttgggtaagagtgtggtgtctctctaacttgtgtggttgttctggcctcgatgtggacggtc-ccccgagctcccctcatgacccaac 6421911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 5367472 - 5367572
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaac-ctaaagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||| ||||||||||| || | ||||||||||| |||||||||||| || |||| ||| |  || |||||||||||||||||||||||| |||||||    
T  5367472 tgtcccagatcggataaaagagcaaaggttgaacaccttataagtaagatgatccatgaacacataaccttaaggttttgggtaagagtgtggcgtctct 5367571  T
Q  99 c 99  Q
    |    
T  5367572 c 5367572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 7598626 - 7598754
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaacctaaagcttaaggttttgggtaagagtgtgacg--tctct 98  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||||||||||||      ||  || ||||| ||||| ||||||||||||  |  |||||    
T  7598626 tgtcccacatcagataaaaaagtaaaggttgaacaccttataagtaagaggac------ccataaccttaacgtttttggtaagagtgtggtgtctctct 7598719  T
Q  99 cacaagtgtggttgttccagcctcgatgtggacgg 133  Q
    |||  |||||||||||| ||| |||||||||||||    
T  7598720 cacttgtgtggttgttcaagcatcgatgtggacgg 7598754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 131
Target Start/End: Complemental strand, 14745435 - 14745300
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||| |||||| ||||  |||||||||  || |||||| ||||||| ||||||| |  || ||||||||||||||||||||||| |||||||    
T  14745435 tgtcccacatcgaataaaatagtaatggttgaacatcttgtaagtatgaggacccataaacccattgccttaaggttttgggtaagagtgtggcgtctct 14745336  T
Q  99 c--acaagt-gtggttgttccagcctcgatgtggac 131  Q
    |    |||| |||||||||| |||||||||||||||    
T  14745335 cttgtaagtggtggttgttctagcctcgatgtggac 14745300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 28254378 - 28254278
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||||||| || |||| ||||||||||  ||||||||||||||| ||||||||  |  | ||||||||||||||||||||||||  ||||||    
T  28254378 tgtcccacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctct 28254279  T
Q  99 c 99  Q
    |    
T  28254278 c 28254278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 31259750 - 31259666
Alignment:
Q  8 catcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtg 90  Q
    |||||||||||| |||| ||||| ||||| |||||||||||| || |||||||||||  | ||||||||||||||||||||||||    
T  31259750 catcggataaaagagtaaaggttcaacaccttataagtaagatgacccataaacctatcaccttaaggttttgggtaagagtgtg 31259666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 37105941 - 37106079
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||| |||||| |||| ||||||||||| ||||||||||| ||| ||||||||  |  | |||||| |||||||||||||||||  ||||||    
T  37105941 tgtcccacatcgaataaaatagtaaaggttgaacaccttataagtaaggggacccataaactcattgccttaagattttgggtaagagtgtggtgtctct 37106040  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||  |||||||| |||||||||||||||||||    
T  37106041 cttgcttgtacggttgttctagcctcgatgtggacggtc 37106079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 40733900 - 40734037
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtc--t 96  Q
    |||||||||||| |||||| |||| || || ||||| |||||||||||||| | ||| |||||| || ||||| ||||||||||||||||||  |||  |    
T  40733900 tgtcccacatcgaataaaagagtaaagatttaacaccttataagtaagagggctcat-aacctacagccttaaagttttgggtaagagtgtggtgtctgt 40733998  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||| |  |||||||||||| || ||||||||||||||||    
T  40733999 ctcgcttgtgtggttgttcaagtctcgatgtggacggtc 40734037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 68 - 135
Target Start/End: Original strand, 3673154 - 3673223
Alignment:
Q  68 ttaaggttttgggtaagagtgtgacgtctctc--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||||| |||||| ||||||||||| |||||||  || ||||||||||||| |||||||||||||||||||    
T  3673154 ttaagattttggctaagagtgtgatgtctctcttactagtgtggttgttctagcctcgatgtggacggtc 3673223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 23346254 - 23346417
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| ||||||| ||| || |||| ||||| ||||| |||||| ||||||| || ||||||| | ||| |||||||||| ||||||||||||| ||||||    
T  23346254 tgtctcacatcgtatagaaaagtaaaggttaaacaccttataa-taagagggcccataaacccatagccttaaggttttcggtaagagtgtgatgtctct 23346352  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |   |  ||| |||||||| ||||| ||||||||||||| ||   |||||||||||||||||||||    
T  23346353 cttgcttgtgcggttgttctagcctagatgtggacggtcgcc-cgagctcccctcatgacccaaca 23346417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 90
Target Start/End: Complemental strand, 36178311 - 36178221
Alignment:
Q  2 gtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    |||||||||||||||||| |||| ||||||||||| ||||||||||| | | ||||||||| |  | |||||| |||||||||||||||||    
T  36178311 gtcccacatcggataaaatagtaaaggttgaacaccttataagtaagggaacccataaacccattgccttaagattttgggtaagagtgtg 36178221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36178410 - 36178320
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgt 89  Q
    |||||||| |||||||||| |||| |||| |||||| ||||||||||| |||| |||||||| |  | |||||||||||||||||||||||    
T  36178410 tgtcccacttcggataaaatagtaaaggtggaacaccttataagtaaggggactcataaacccattgtcttaaggttttgggtaagagtgt 36178320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 40163514 - 40163348
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag--cttaaggttttgggtaagagtgtgacgtctc 97  Q
    |||||||||||||||| || |||| ||||||||||| |||||||||||| || |||| ||||||  |   |||||||||||||||| ||||||  |||||    
T  40163514 tgtcccacatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccattaacctagtgtctttaaggttttgggtaaaagtgtggtgtctc 40163415  T
Q  98 tc--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaacat 163  Q
    ||   |  |||||||||||| | ||||||||| || |||||||   ||||||||  ||||||||||||    
T  40163414 tcttgcttgtgtggttgttctaacctcgatgtagatggtctcc-tgagctccccctatgacccaacat 40163348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 70 - 134
Target Start/End: Original strand, 6421714 - 6421780
Alignment:
Q  70 aaggttttgggtaagagtgtgacgtctctc--acaagtgtggttgttccagcctcgatgtggacggt 134  Q
    |||||||||||||||||||||  |||||||  ||  ||||||||||||| |||||||||||||||||    
T  6421714 aaggttttgggtaagagtgtggtgtctctctaacttgtgtggttgttccggcctcgatgtggacggt 6421780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 16542467 - 16542518
Alignment:
Q  2 gtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac 53  Q
    |||||||||||||||||| |||| ||||||||||| |||||| |||||||||    
T  16542467 gtcccacatcggataaaatagtaaaggttgaacaccttataaataagaggac 16542518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 31899563 - 31899514
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    ||||||||||||||| |||| | ||||||||| |||||||||||||||||    
T  31899563 ccacatcggataaaatagtaaatgttgaacaccttataagtaagaggacc 31899514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 1769909 - 1769961
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac 53  Q
    |||| |||||||||||||| |||| | ||||||||| ||||||||||||||||    
T  1769909 tgtcacacatcggataaaagagtaaaagttgaacaccttataagtaagaggac 1769961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28254253 - 28254201
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac 53  Q
    |||| ||||||||||| || |||| ||||||||||| ||||||||||||||||    
T  28254253 tgtctcacatcggatagaaaagtaaaggttgaacactttataagtaagaggac 28254201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 29873678 - 29873578
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| |||| || ||| |||||||||||  ||||||||  |||||| |||||||  |  || ||||||||||| |||||||||||||||||||    
T  29873678 tgtcccacatcagatagaaaagtggaggttgaacattttataagtgggaggactcataaactcattgccttaaggttttgagtaagagtgtgacgtctct 29873579  T
Q  99 c 99  Q
    |    
T  29873578 c 29873578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 28531455 - 28531364
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagg-accataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    |||||||||||||||| || || | ||||||||||| ||||||||||||||  ||||||||  |  | |||||| |||||||||||||||||    
T  28531455 tgtcccacatcggatagaaaagcaaaggttgaacaccttataagtaagaggtcccataaactcattgccttaagattttgggtaagagtgtg 28531364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 25 - 99
Target Start/End: Complemental strand, 41678484 - 41678409
Alignment:
Q  25 gaggttgaacacattataagtaagaggacc-ataaacctaaagcttaaggttttgggtaagagtgtgacgtctctc 99  Q
    |||||| ||||| |||||||| |||||||| ||||||||    |||||||||||| |||||||||| |||||||||    
T  41678484 gaggttaaacactttataagtgagaggacccataaacctttgccttaaggttttgagtaagagtgtaacgtctctc 41678409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 67 - 134
Target Start/End: Original strand, 3672786 - 3672855
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacgtctctcacaa--gtgtggttgttccagcctcgatgtggacggt 134  Q
    |||||| |||||||||||||||||  |||||||  ||  |||||||||||| || |||||||||||||||    
T  3672786 cttaagattttgggtaagagtgtggtgtctctcttaattgtgtggttgttctagtctcgatgtggacggt 3672855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 135
Target Start/End: Original strand, 7598251 - 7598383
Alignment:
Q  7 acatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacg--tctctcaca 102  Q
    |||||| ||| || |||| ||||| ||||| |||||| |||||||||| ||||||  | ||| |||||||||||||||||| | ||  |  ||||||||     
T  7598251 acatcgaatagaaaagtaaaggttcaacaccttataaataagaggacccataaactcatagccttaaggttttgggtaagaatatggtgtctctctcact 7598350  T
Q  103 agtgtggttgttccagcctcgatgtggacggtc 135  Q
     ||| |||||||| |||||||||||| ||||||    
T  7598351 tgtgcggttgttcaagcctcgatgtgaacggtc 7598383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 29874164 - 29874067
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtct 96  Q
    ||||||||||| |||| || ||| |||||||||||| |||||| |  ||||| ||||||||| |  | ||||||||||||| |||||||||| |||||    
T  29874164 tgtcccacatcagatagaaaagtggaggttgaacactttataattgggaggacccataaacccattgccttaaggttttggataagagtgtggcgtct 29874067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 100
Target Start/End: Original strand, 30323549 - 30323582
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacgtctctca 100  Q
    |||||||||||||||||||||||| |||||||||    
T  30323549 cttaaggttttgggtaagagtgtggcgtctctca 30323582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36785704 - 36785664
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattat 41  Q
    ||||||||||||||||||| |||| ||||||||||| ||||    
T  36785704 tgtcccacatcggataaaatagtaaaggttgaacaccttat 36785664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 65; Significance: 1e-28; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 2740717 - 2740853
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| ||||||| | || |||||||||||  ||||||||||| |||||||    
T  2740717 tgtcccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacctataaacccagagccttaaggttttacgtaagagtgtggcgtctct 2740816  T
Q  99 cacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    | ||  ||||||||||| ||||||||| |||| ||||    
T  2740817 ctcacttgtggttgttctagcctcgatatggatggtc 2740853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 4 - 132
Target Start/End: Original strand, 10245940 - 10246071
Alignment:
Q  4 cccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaacctaaag-cttaaggttttgggtaagagtgtgacgtct--ctca 100  Q
    |||||||||||||||| |||| ||||||||||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||  ||||  ||      
T  10245940 cccacatcggataaaagagtaaaggttgaacaccttataagtaagaggaccataaacccaaagccttaaggttttgggtaagagtgtggtgtctcccttg 10246039  T
Q  101 caagtgtggttgttccagcctcgatgtggacg 132  Q
    |  || ||||||||| ||||||||||||||||    
T  10246040 cttgtctggttgttctagcctcgatgtggacg 10246071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 36608800 - 36608636
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||||||||||| |||| | ||||||||| | ||||||||||||| ||||||| | |  | ||||||||||||||||||||||||  ||||||    
T  36608800 tgtccaacatcggataaaagagtaaaagttgaacacctcataagtaagaggatccataaatccattgtcttaaggttttgggtaagagtgtggtgtctct 36608701  T
Q  99 caca--agtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    | ||  ||||||||||||| ||||||||||||||||||| ||  ||||||||||| ||||||||||    
T  36608700 ctcactagtgtggttgttctagcctcgatgtggacggtc-ccccaagctcccctcgtgacccaaca 36608636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 160
Target Start/End: Original strand, 44620677 - 44620838
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagcttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||||||||||| |||||||||  || ||||||||||||||||||||||||   ||||||    
T  44620677 tgtcccacatcggatgaaatagtagaggttgaacactttataagtaagaggacccataaaccataaccttaaggttttgggtaagagtgtggtttctctc 44620776  T
Q  100 --acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaa 160  Q
       |  ||| |||||||  | ||||||||||||||||| ||  ||||||||||||||| ||||    
T  44620777 ttgcttgtgcggttgttatatcctcgatgtggacggtc-ccccaagctcccctcatgatccaa 44620838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 25483353 - 25483494
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||||||||||| |||| ||||||||||  ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  ||||||    
T  25483353 tgtctcacatcggataaaatagtaaaggttgaacatcttataagtaagaggatccataaacccattgccttaaggttttgggtaagagtgtggtgtctct 25483452  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctcc 138  Q
    |   |  |||||||||||| ||||||||||||||||||||||    
T  25483453 cttgcttgtgtggttgttctagcctcgatgtggacggtctcc 25483494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 39404035 - 39404173
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| |||| | |||||| |||| ||||||||||| |||||||||||||||| |||||||  | ||| ||||||||||||||||||||||| |||||||    
T  39404035 tgtcctacattgaataaaagagtaaaggttgaacactttataagtaagaggactcataaactcatagcattaaggttttgggtaagagtgtggcgtctct 39404134  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  |||||||||||| |||||||||||||||||||    
T  39404135 cttgcttgtgtggttgttctagcctcgatgtggacggtc 39404173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 50630894 - 50630794
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  ||||||    
T  50630894 tgtcctacatcggataaaatagtaaaggttgaacacattataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctct 50630795  T
Q  99 c 99  Q
    |    
T  50630794 c 50630794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 39404415 - 39404553
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| |||| |||| |||||| ||||||||||||||| ||||||||||| || |||||||||||||| |||| ||||  ||||||    
T  39404415 tgtcccacatcagataaaagagtaaaggtggaacaccttataagtaagaggacccataaacctatagccttaaggttttgggcaagaatgtggtgtctct 39404514  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  |||||||||||| |||||||||||| ||||||    
T  39404515 cttgcttgtgtggttgttctagcctcgatgtgaacggtc 39404553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 3 - 131
Target Start/End: Original strand, 54936215 - 54936346
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctca 100  Q
    ||||||||| ||||||| |||| ||||||||||| || |||||||||||| ||||||||| |  | ||||||||||||||||||||||||  |||||||     
T  54936215 tcccacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtggtgtctctct 54936314  T
Q  101 ca-agtgtggttgttccagcctcgatgtggac 131  Q
    ||   ||||||||||| |||||||||||||||    
T  54936315 cactatgtggttgttctagcctcgatgtggac 54936346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 36629254 - 36629418
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||||||| || |||| | ||| ||||| ||||||||||||||||| ||||||  |  || |||||||||||||||||||||||  ||||||    
T  36629254 tgtcccacatcggatagaaaagtaaaagttaaacaccttataagtaagaggacccataaactcattgccttaaggttttgggtaagagtgtggtgtctct 36629353  T
Q  99 ca--caagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctc-atgacccaac 161  Q
    |   |  |||||||||||| ||||||||||||||||||| ||| | ||||||||| ||||||||||    
T  36629354 cttgcttgtgtggttgttctagcctcgatgtggacggtc-ccacatgctcccctcaatgacccaac 36629418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 54017734 - 54017593
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||| || ||||||| |||| ||||||||||  ||||||||||||||| ||||||||| |  | ||||||||||| ||||||||||||| ||||||    
T  54017734 tgtcccacgtcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccattgccttaaggttttaggtaagagtgtgatgtctct 54017635  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctcc 138  Q
    |   |   ||||||||||| ||||||||||||||||||||||    
T  54017634 cttgcttatgtggttgttctagcctcgatgtggacggtctcc 54017593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 22183401 - 22183265
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctca 100  Q
    ||||||||||||||||| |||| | ||||||||  |||||||||| |||| ||||||||| |  | ||||||||||||| |||||||||| ||||||||     
T  22183401 tcccacatcggataaaagagtaaatgttgaacaatttataagtaaaaggacccataaacccattgccttaaggttttggataagagtgtggcgtctctct 22183302  T
Q  101 caagtgt--ggttgttccagcctcgatgtggacggtc 135  Q
    ||  |||  |||||||| |||||||||||||||||||    
T  22183301 cacttgtacggttgttctagcctcgatgtggacggtc 22183265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1731786 - 1731648
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tct 96  Q
    ||||||||||| |||||||||||| ||||||||||  |||||| |||||||| ||||||||| |  | ||||||||||||||||||||||||  |  |||    
T  1731786 tgtcccacatcagataaaacagtaaaggttgaacatcttataaataagaggacccataaaccaattgccttaaggttttgggtaagagtgtggtgtttct 1731687  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||  |  |||||||||||| |||||| ||||||||||||    
T  1731686 cttgcttgtgtggttgttctagcctcaatgtggacggtc 1731648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 135
Target Start/End: Original strand, 44620374 - 44620508
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagag-gaccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tctctca 100  Q
    |||||||||||||||||||| ||||||||||| |||||| |||||| | ||||||||| |  | ||||||||||||||||||||||||| |  |||||      
T  44620374 ccacatcggataaaacagtaaaggttgaacaccttataaataagagagcccataaacccattgccttaaggttttgggtaagagtgtgatgtttctcttg 44620473  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  |||||||||||| | ||| |||||||||||||    
T  44620474 cttgtgtggttgttctaaccttgatgtggacggtc 44620508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 50002443 - 50002581
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||||||||||| |||| ||||||||||| || |||||||||||| ||||||| | |  | ||||||||||||||||||||||||  ||||||    
T  50002443 tgtctcacatcggataaaagagtaaaggttgaacactttttaagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtggtgtctct 50002542  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  ||  ||| |||||||| ||||||||||||| |||||    
T  50002543 cttacttgtgcggttgttctagcctcgatgtgggcggtc 50002581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 54108930 - 54109029
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagcttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  || | | ||||||||||||||||||  |||||||    
T  54108930 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagttttgggtaagagtgtggtgtctctc 54109029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 9 - 99
Target Start/End: Complemental strand, 4955448 - 4955356
Alignment:
Q  9 atcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||| |||  ||||||||||| |||||||||||||||| |||||||| |  || ||||||||||||||||||||||| ||||||||    
T  4955448 atcggataaaatagttaaggttgaacaccttataagtaagaggactcataaacccattgccttaaggttttgggtaagagtgtggcgtctctc 4955356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 34646788 - 34646688
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||||||||||||||| | ||||||||| |||||| ||||||||| |||||||  |  | ||||||||||||||||||||||||  ||||||    
T  34646788 tgtcccacatcggataaaacagtaaatgttgaacaccttataactaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctct 34646689  T
Q  99 c 99  Q
    |    
T  34646688 c 34646688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 4 - 90
Target Start/End: Original strand, 44621022 - 44621110
Alignment:
Q  4 cccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||| | |||||||  |  | ||||||||||||||||||||||||    
T  44621022 cccacatcggataaaacagtaaaggttgaacaccttataagtaagagggcacataaactcattgtcttaaggttttgggtaagagtgtg 44621110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 45496822 - 45496922
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||||||||||  ||| ||||||||||| ||||||||||||||||| ||||||  |  | ||||||||||||||||||||||||  ||||||    
T  45496822 tgtcccacatcggataaaatcgtaaaggttgaacaccttataagtaagaggacctataaactcattgtcttaaggttttgggtaagagtgtggtgtctct 45496921  T
Q  99 c 99  Q
    |    
T  45496922 c 45496922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 5 - 90
Target Start/End: Original strand, 20825857 - 20825944
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||||||||||||| |||| ||||||||||| |||||| |||||| | ||||||||||  || ||||||||||||||||||||||||    
T  20825857 ccacatcggataaaagagtaaaggttgaacaccttataaataagagcacccataaacctttagccttaaggttttgggtaagagtgtg 20825944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 67 - 151
Target Start/End: Complemental strand, 23817752 - 23817666
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacgtctctca--caagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctc 151  Q
    ||||||||||||||||||||||||  |||||||   | ||||||||||||| ||||||||||||||||||| || | ||||||||||    
T  23817752 cttaaggttttgggtaagagtgtggtgtctctcttgctagtgtggttgttctagcctcgatgtggacggtcccccatagctcccctc 23817666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 137
Target Start/End: Complemental strand, 32941256 - 32941122
Alignment:
Q  7 acatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctca--ca 102  Q
    |||||||| | ||||||| ||||||||||| |||||| ||||||| | |||||||  |  || ||||||||||||||||||||||||||||||||   |     
T  32941256 acatcggaaagaacagtaaaggttgaacaccttataaataagagggctcataaactcattgccttaaggttttgggtaagagtgtgacgtctctcttgct 32941157  T
Q  103 agtgtggttgttccagcctcgatgtggacggtctc 137  Q
     ||| |||||||| ||||||||||||||| |||||    
T  32941156 tgtgcggttgttctagcctcgatgtggacagtctc 32941122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 54017839 - 54017788
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||||||||    
T  54017839 tcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacc 54017788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 55933263 - 55933125
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||||||||||| ||||  |||||||||| ||||||||||||||| ||||||||| |  | ||||| ||||||||||||||||||  ||||||    
T  55933263 tgtcctacatcggataaaatagtaagggttgaacaccttataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtggtgtctct 55933164  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  ||  ||   ||||||| |||||||||||||||||||    
T  55933163 cttacttgtacagttgttctagcctcgatgtggacggtc 55933125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 138
Target Start/End: Original strand, 3340824 - 3340965
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtc--t 96  Q
    |||||| |||| ||| ||| |||| ||||||| ||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  |||  |    
T  3340824 tgtcccgcatcagatgaaagagtaaaggttgagcaccttataagtaagaggacccataaacccactgccttaaggttttgggtaagagtgtggtgtcttt 3340923  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtctcc 138  Q
    ||  |  ||| |||||||| ||||||||||||||||||||||    
T  3340924 cttgcttgtggggttgttctagcctcgatgtggacggtctcc 3340965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 22028100 - 22027936
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tct 96  Q
    ||||||||||||||||||| |  | ||||||||||| ||||||||||||||| |||||||| ||  | ||||||||||||||||||| ||||  |  |||    
T  22028100 tgtcccacatcggataaaatacgaaaggttgaacaccttataagtaagaggacccataaacatattgccttaaggttttgggtaagaatgtggtgtctct 22028001  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    ||| |   ||||||||||  || |||||||||||| ||| ||  | ||||||||||||||||||||    
T  22028000 ctcgcttatgtggttgttttagtctcgatgtggacagtc-cctcaggctcccctcatgacccaaca 22027936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 45489470 - 45489333
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaagcttaaggttttgggtaagagtgtgacgtctc-- 97  Q
    |||| |||||||||||||| |||| |||||||||||  |||||||||||| || | ||||||||  | ||||| |||| ||||||||||||| |||||      
T  45489470 tgtctcacatcggataaaagagtaaaggttgaacaccatataagtaagagaactcttaaacctactgtttaagatttttggtaagagtgtgatgtctctt 45489371  T
Q  98 tcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  | |||||| |||||| |||||||||||||| ||||    
T  45489370 ttgctagtgtgattgttctagcctcgatgtggatggtc 45489333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 3244590 - 3244458
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| ||||||||||| || |||| ||||||||||  ||||||||||||||||| ||||||  |  | ||||| ||||||||||||| |||| |||||||    
T  3244590 tgtctcacatcggatagaaaagtaaaggttgaacatcttataagtaagaggacccataaactcattgtcttaaagttttgggtaagaatgtgtcgtctct 3244491  T
Q  99 cacaagtgt--ggttgttccagcctcgatgtgg 129  Q
    | ||  |||  ||||||||||||||||||||||    
T  3244490 ctcacttgtatggttgttccagcctcgatgtgg 3244458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 5 - 149
Target Start/End: Original strand, 50459742 - 50459890
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaaccta-aagcttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    ||||||||| ||||| |||| ||||||||||  |||||||||||||||| |||||||| |  | ||||||||||| |||||||| |||  |||||||       
T  50459742 ccacatcggttaaaagagtaaaggttgaacatcttataagtaagaggactcataaacccattatcttaaggttttaggtaagagcgtggtgtctctcttg 50459841  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccc 149  Q
    |  |||||||||||| |||||||||||| |||||| |  ||||||||||    
T  50459842 cttgtgtggttgttctagcctcgatgtgcacggtccctcaaagctcccc 50459890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 52884904 - 52884965
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacc 61  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| |||||||||    
T  52884904 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaacc 52884965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 54343140 - 54343087
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  54343140 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 54343087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 3 - 138
Target Start/End: Complemental strand, 4390238 - 4390099
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctc- 99  Q
    ||||||||| ||||||| |||| ||||||||||| ||||||||||||||| || | | |  |  || ||||||||||||||||||||||||||||||||     
T  4390238 tcccacatcagataaaagagtaaaggttgaacaccttataagtaagaggatcctttagcacattgcgttaaggttttgggtaagagtgtgacgtctctct 4390139  T
Q  100 -acaagtgtggttgttccagcctcgatgtggacggtctcc 138  Q
      |  |||  ||||||| |||||||||| |||||||||||    
T  4390138 tgcttgtgcagttgttctagcctcgatgcggacggtctcc 4390099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 20826234 - 20826334
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| | ||||||||| ||||||||||||| | ||||||||| | || |||||  |||| ||||||||||||| ||||||    
T  20826234 tgtcccacatcggataaaatagtaaaagttgaacacgttataagtaagagaacccataaacccatagccttaacattttaggtaagagtgtgatgtctct 20826333  T
Q  99 c 99  Q
    |    
T  20826334 c 20826334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 49880177 - 49880277
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||| | |||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | |||||||||||||||||||| |||  ||||||    
T  49880177 tgtcccacattgaataaaatagtaaaggttgaacaccttataagtaagaggacccataaacccactgccttaaggttttgggtaagagcgtggtgtctct 49880276  T
Q  99 c 99  Q
    |    
T  49880277 c 49880277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 41370374 - 41370512
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||| ||||||||||| |||| | |||||| || ||||||||||||||| ||||||||| |  | ||||| |||||||||||||||||   ||||||    
T  41370374 tgtcccaaatcggataaaatagtaaatgttgaaaaccttataagtaagaggacccataaacccattgccttaaagttttgggtaagagtgtagtgtctct 41370473  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  | |||||||||| |||||||||||||||||||    
T  41370474 cttgcttgagtggttgttctagcctcgatgtggacggtc 41370512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 18932887 - 18932750
Alignment:
Q  2 gtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    |||| ||||||||||||| |||| |||||||| || |||||| |||||||| ||||||||| |  | ||||||||||| ||||||||||||  |||||||    
T  18932887 gtcctacatcggataaaatagtaaaggttgaataccttataaataagaggacccataaacccattgccttaaggttttaggtaagagtgtggtgtctctc 18932788  T
Q  100 --acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
      ||  | |||||||||  |||||||||||| ||||||    
T  18932787 ttacttgagtggttgttatagcctcgatgtgtacggtc 18932750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 22028483 - 22028342
Alignment:
Q  26 aggttgaacacattataagtaagaggacc-ataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctca--caagtgtggttgttccagcct 121  Q
    ||||||||||| |||| |||||||||||| ||||||  |  | ||||| ||||||||||||||||||  |||||||   |  ||| |||||||| |||||    
T  22028483 aggttgaacaccttattagtaagaggacccataaactcattgtcttaatgttttgggtaagagtgtggtgtctctcttgcttgtgaggttgttctagcct 22028384  T
Q  122 cgatgtggacggtctccaaaagctcccctca-tgacccaaca 162  Q
    | |||||||||||| || ||||||||||||| ||||||||||    
T  22028383 caatgtggacggtcccccaaagctcccctcactgacccaaca 22028342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 16 - 99
Target Start/End: Original strand, 43174539 - 43174624
Alignment:
Q  16 aaaacagtagaggttgaacacattataagtaagaggac-cataaaccta-aagcttaaggttttgggtaagagtgtgacgtctctc 99  Q
    |||| |||| ||||||||||| |||||||||||||||| ||||||||||  | ||||| || ||||||||||||||| ||||||||    
T  43174539 aaaagagtaaaggttgaacaccttataagtaagaggacacataaacctatgaccttaaagtgttgggtaagagtgtggcgtctctc 43174624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 49076579 - 49076534
Alignment:
Q  9 atcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||||||||||||||| ||||||||||| |||||||||||||||||    
T  49076579 atcggataaaacagtaaaggttgaacaccttataagtaagaggacc 49076534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 52884712 - 52884813
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggtttt-gggtaagagtgtgacgtctc 97  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||| || | ||||||| |  | ||||||||||| |||||||||||||  |||||    
T  52884712 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagatgatcgataaacccattgccttaaggttttggggtaagagtgtggtgtctc 52884811  T
Q  98 tc 99  Q
    ||    
T  52884812 tc 52884813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 16888955 - 16888855
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||||||| || |||| |||||||| || ||||||||||||| ||| ||||||  |  | |||| |||||||||||||||||||| ||||||    
T  16888955 tgtcccacatcggatagaaaagtaaaggttgaataccttataagtaagagaacctataaactcattgtcttacggttttgggtaagagtgtgatgtctct 16888856  T
Q  99 c 99  Q
    |    
T  16888855 c 16888855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 28034246 - 28034346
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||| ||||||||| || ||| |||||||||||| |||||||| |||| | |||||||| ||  || |||||||||| |||||||||||| |||||||    
T  28034246 tgtcccgcatcggatagaaaagtggaggttgaacactttataagtgagagaacccataaacttattgctttaaggttttaggtaagagtgtggcgtctct 28034345  T
Q  99 c 99  Q
    |    
T  28034346 c 28034346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 26 - 162
Target Start/End: Complemental strand, 34004698 - 34004560
Alignment:
Q  26 aggttgaacacattataagtaagaggacc-ataaacctaaagcttaaggttttgggtaagagtgtgacgtctctcacaagtgtg--gttgttccagcctc 122  Q
    ||||||||||  ||||||||||||||||| ||||||  |   ||||||||||| | |||||||||| |||||||| |   ||||  ||||||| ||||||    
T  34004698 aggttgaacaacttataagtaagaggacccataaactcattccttaaggttttcgataagagtgtgccgtctctctcccttgtgcggttgttctagcctc 34004599  T
Q  123 gatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |||||| |||||||||   |||||| ||||||||||||||    
T  34004598 gatgtgaacggtctcc-cgagctcctctcatgacccaaca 34004560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 48111833 - 48111699
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaa-cctaaagcttaaggttttgggtaagagtgtgacg--tctctca 100  Q
    |||| |||||||||| |||| |||||||||||||||||||||| |||||  ||||| ||   | ||||||||||| |||| |||||||  |  |||||||    
T  48111833 ccacctcggataaaagagtaaaggttgaacacattataagtaaaaggacttataaatccattaccttaaggttttaggtatgagtgtggtgtctctctca 48111734  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||| ||||||| ||| | |||| ||||||||||||    
T  48111733 caaatgtggtttttctaacctcaatgtggacggtc 48111699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 67 - 138
Target Start/End: Original strand, 3700442 - 3700515
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacgtctctcacaa--gtgtggttgttccagcctcgatgtggacggtctcc 138  Q
    ||||||||||||| ||||||| ||| ||||||| ||   |||||||| ||| ||||||||||||||||||||||    
T  3700442 cttaaggttttggataagagtatgatgtctctctcatttgtgtggttattcaagcctcgatgtggacggtctcc 3700515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 98
Target Start/End: Original strand, 18879852 - 18879922
Alignment:
Q  30 tgaacacattataagtaagaggacc-ataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||| |||||||||||| |||| |||||||||    ||||||||||||||||||||||||||||||||    
T  18879852 tgaacaccttataagtaagatgacctataaacctatttccttaaggttttgggtaagagtgtgacgtctct 18879922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 3341145 - 3341198
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||||||||| |||||||| |||| ||||| ||||| |||||||||||||||||    
T  3341145 tgtcccacattggataaaagagtaaaggttaaacactttataagtaagaggacc 3341198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44620313 - 44620362
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagag 50  Q
    |||||||||| |||||||| |||| ||||||||||| |||||||||||||    
T  44620313 tgtcccacatgggataaaatagtaaaggttgaacaccttataagtaagag 44620362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 54741317 - 54741264
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||| ||||||||||| || |||| ||||||||||| |||||||||||||||||    
T  54741317 tgtctcacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacc 54741264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 2741088 - 2741184
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtc 95  Q
    ||||||||||| |||| || |||| |||||||| || ||||||||||||||| ||||||  | |  | |||||||||||||||||||||||| ||||    
T  2741088 tgtcccacatcagatagaatagtaaaggttgaataccttataagtaagaggacccataactccattgccttaaggttttgggtaagagtgtggcgtc 2741184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 16889667 - 16889537
Alignment:
Q  9 atcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--acaag 104  Q
    |||||||| || |||| |||||||| || |||||||||||||||  ||||||||||  | ||||| ||||||||||||||| ||  |||||||   |  |    
T  16889667 atcggatagaaaagtaaaggttgaataccttataagtaagaggattcataaacctactgccttaaagttttgggtaagagtatggtgtctctcttccttg 16889568  T
Q  105 tgtggttgttccagcctcgatgtggacggtc 135  Q
    |||| |||||| | |||||||||||||||||    
T  16889567 tgtgattgttctaacctcgatgtggacggtc 16889537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 36572036 - 36572174
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tct 96  Q
    |||||||||||| |||||| |||| | ||||||||| |||||||||||| || ||||||| | |  | ||||||||||||||| ||||| ||  |  |||    
T  36572036 tgtcccacatcgaataaaagagtaaatgttgaacaccttataagtaagaagacccataaatccattgccttaaggttttgggttagagtatggtgtctct 36572135  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||| |  ||| |||||||| |||||||||||| ||||||    
T  36572136 ctcgcttgtgcggttgttcaagcctcgatgtgaacggtc 36572174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 7 - 50
Target Start/End: Original strand, 44620968 - 44621011
Alignment:
Q  7 acatcggataaaacagtagaggttgaacacattataagtaagag 50  Q
    |||||||||||||| ||| ||||||||||| |||||||||||||    
T  44620968 acatcggataaaactgtaaaggttgaacaccttataagtaagag 44621011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41707603 - 41707557
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaa 47  Q
    ||||||||||||||||||| |||| |||||||||||  |||||||||    
T  41707603 tgtcccacatcggataaaagagtaaaggttgaacaccatataagtaa 41707557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 49302921 - 49303014
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataa--gtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtg 90  Q
    |||||||||||  |||||| |||| ||||||||||  ||||||  ||||||||||| ||||||| |  || |||||||||||||||||||||||    
T  49302921 tgtcccacatcaaataaaaaagtaaaggttgaacatcttataaaagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 49303014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 44621443 - 44621492
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagag 50  Q
    ||||| |||| ||||||||||||| ||||| ||||| |||||||||||||    
T  44621443 tgtccaacatgggataaaacagtaaaggttaaacaccttataagtaagag 44621492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 110 - 163
Target Start/End: Complemental strand, 51768086 - 51768034
Alignment:
Q  110 ttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaacat 163  Q
    |||||| | |||||||||||||||||||| ||| || |||||||||||||||||    
T  51768086 ttgttctaacctcgatgtggacggtctcccaaa-cttccctcatgacccaacat 51768034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 54108553 - 54108606
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    ||||||| || |||||||| |||| ||||||||||| |||||||||| ||||||    
T  54108553 tgtcccatataggataaaatagtaaaggttgaacaccttataagtaaaaggacc 54108606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 2891924 - 2891864
Alignment:
Q  38 ttataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtct 96  Q
    ||||||||||||||| |||||||||||| | ||||||||||||||| | ||||||| ||||    
T  2891924 ttataagtaagaggatccataaacctaatgtcttaaggttttgggttaaagtgtgatgtct 2891864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3700382 - 3700434
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac 53  Q
    ||||| ||||||||||||| |||| | ||||||||| |||||||||| |||||    
T  3700382 tgtcctacatcggataaaagagtaaatgttgaacaccttataagtaaaaggac 3700434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 99
Target Start/End: Complemental strand, 15841439 - 15841407
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||||||||||||||||||||| |||||||    
T  15841439 cttaaggttttgggtaagagtgtgatgtctctc 15841407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 74 - 135
Target Start/End: Original strand, 43174233 - 43174296
Alignment:
Q  74 ttttgggtaagagtgtgacgtctctcacaa--gtgtggttgttccagcctcgatgtggacggtc 135  Q
    |||||||||||||||||  ||||||| ||   |||||||||||| ||||| |||||||||||||    
T  43174233 ttttgggtaagagtgtggtgtctctctcacttgtgtggttgttcaagccttgatgtggacggtc 43174296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 54017957 - 54017819
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||||||||||| |||| ||||||||||| |||||||||||||||| ||||||||||| | ||||||||||||||||||||||||  ||||||    
T  54017957 tgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggactcataaacctaacgccttaaggttttgggtaagagtgtggtgtctct 54017858  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  ||  |||||||||||| ||| ||||||||| |||||    
T  54017857 cttacttgtgtggttgttctagcttcgatgtgggcggtc 54017819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 54018332 - 54018201
Alignment:
Q  8 catcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctca--caa 103  Q
    |||||||||||| |||| || |||||||| ||||||||||||||| |||||||||||| | ||||||||||||||||||||||||  ||||||||  |      
T  54018332 catcggataaaagagtaaagattgaacaccttataagtaagaggacccataaacctaacgccttaaggttttgggtaagagtgtggtgtctctcatgctt 54018233  T
Q  104 gtgtggttgttccagcctcgatgtggacggtc 135  Q
    |||||||||||| ||||||||||||| |||||    
T  54018232 gtgtggttgttctagcctcgatgtgggcggtc 54018201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 33803393 - 33803255
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtgacgtct-- 96  Q
    ||||||||||||||||||| |||| |||||||||||  |||||||||||||| ||||||||| |  || ||||||| ||||||||||||||| |||||      
T  33803393 tgtcccacatcggataaaatagtaaaggttgaacaccatataagtaagaggacccataaacccattgcattaaggtattgggtaagagtgtggcgtctcc 33803294  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||| |  |||||||||||| |||||||||||||||||||    
T  33803293 ctctcttgtgtggttgttctagcctcgatgtggacggtc 33803255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 52634693 - 52634792
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    |||||||||||||||||||||||| ||||||||| | |||||||||||||  ||||||||| |  | |||||||||||||||||||||||||||||||||    
T  52634693 tgtcccacatcggataaaacagtaaaggttgaacgccttataagtaagagacccataaacccattgccttaaggttttgggtaagagtgtgacgtctctc 52634792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 29645043 - 29644882
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||| ||||| ||||||||||||||| ||||||||| |  | |||||||||||||||||||||||| |||||||    
T  29645043 tgtcccacatcggataaaagagtaaaggttaaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggcgtctct 29644944  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgaccca 159  Q
    |   |   || |||||||  ||||||||||||||||||| ||  ||||||||||| |||||||    
T  29644943 cttgcttatgcggttgttttagcctcgatgtggacggtc-ccccaagctcccctcgtgaccca 29644882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 35946539 - 35946705
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||    | ||||||||||||||||| ||||||  ||||||    
T  35946539 tgtcccacatcggataaaacagtaaaggttgaacaccttataagtaagaggacccataaacccgttgccttaaggttttgggtaaaagtgtggtgtctct 35946638  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaacat 163  Q
    |   |  |||   |||||| ||||||||||||||||||| || ||||||||||   |||||||||||    
T  35946639 cttgcttgtgcaattgttctagcctcgatgtggacggtcccccaaagctcccccagtgacccaacat 35946705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 42342529 - 42342391
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| |||| ||||| ||||| ||||||||||||||| ||||||| | |  | ||||||||||||||||||||||||||||||||    
T  42342529 tgtcccacatccgataaaagagtaaaggttcaacaccttataagtaagaggacccataaatccattgtcttaaggttttgggtaagagtgtgacgtctct 42342430  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  ||| |||||||| |||||| ||||||||||||    
T  42342429 cttgcttgtgcggttgttctagcctcaatgtggacggtc 42342391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 39935096 - 39934963
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||| |||||| |||||||||||| ||||||    
T  39935096 tgtcctacatcggataaaagagtaaaggttgaacaccttataagtaagaggatccataaacccattgccttaaagttttgagtaagagtgtgatgtctct 39934997  T
Q  99 c--acaagtgtggttgttccagcctcgatgtgga 130  Q
    |   |  |||||||||||| ||||||||||||||    
T  39934996 cttgcttgtgtggttgttctagcctcgatgtgga 39934963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 12114701 - 12114565
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc- 99  Q
    |||||||||||||| || |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  |||||||     
T  12114701 tcccacatcggatagaaaagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctctct 12114602  T
Q  100 -acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
     ||  ||| |||||||| |||| |||||||| |||||    
T  12114601 tacttgtgcggttgttctagccacgatgtggtcggtc 12114565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 41359904 - 41359768
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctca 100  Q
    |||||||||||||| || |||| |||||||| || ||||||||||||||||| ||||||| |  || |||||||||||||||||| |||| ||||||||     
T  41359904 tcccacatcggatacaatagtaaaggttgaataccttataagtaagaggacccataaacccattgccttaaggttttgggtaagaatgtggcgtctctct 41359805  T
Q  101 caa--gtgtggttgttccagcctcgatgtggacggtc 135  Q
    |    |||||||||||| ||||||||||||| |||||    
T  41359804 cgcttgtgtggttgttctagcctcgatgtgggcggtc 41359768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 50612593 - 50612450
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaa------agcttaaggttttgggtaagagtgtgacg 93  Q
    ||||||||||||||||||| |||| || |||||||| |||||||||||||||| |||||| ||||      | ||||||||||||||||||||||||| |    
T  50612593 tgtcccacatcggataaaatagtaaagattgaacaccttataagtaagaggactcataaatctaacatattatcttaaggttttgggtaagagtgtgatg 50612494  T
Q  94 tctctc--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||||||   |  | |||||||||||| |||||| ||||||||||    
T  50612493 tctctcttgcttgagtggttgttccatcctcgacgtggacggtc 50612450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 29644722 - 29644622
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||| ||| |||| ||||||||||| ||||||||||||| | ||||||||| |  | |||||||||||||||||||||||| |||||||    
T  29644722 tgtcccacatcggattaaagagtaaaggttgaacaccttataagtaagagaacccataaacccattgtcttaaggttttgggtaagagtgtggcgtctct 29644623  T
Q  99 c 99  Q
    |    
T  29644622 c 29644622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 32589720 - 32589858
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||  ||||||| | || ||||||||||| ||||||||||||||| ||||||||| |  | |||||||||||||||||||||| || ||||||    
T  32589720 tgtcccacataagataaaataataaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgcgatgtctct 32589819  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  |||||||||||| || ||||||||||||||||    
T  32589820 cttgcttgtgtggttgttctaggctcgatgtggacggtc 32589858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 37990776 - 37990642
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    ||||||||||||||| |||| | ||||||||| |||||||||||||||| |||||||  |  | ||||||||||||||||||||||||  |||||||       
T  37990776 ccacatcggataaaatagtaaatgttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctctcttg 37990677  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  ||||| |||||| |||||||||||||||||||    
T  37990676 cttgtgtgattgttctagcctcgatgtggacggtc 37990642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 37991118 - 37990980
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| ||||| |||||||| |||| ||||||||||| ||||||||||||||||| ||||||  |  | ||||||||||||||||||||||||  ||||||    
T  37991118 tgtctcacattggataaaatagtaaaggttgaacaccttataagtaagaggacctataaactcatcgccttaaggttttgggtaagagtgtggtgtctct 37991019  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |   ||||||||||| |||||||||||||||||||    
T  37991018 cttgcttatgtggttgttctagcctcgatgtggacggtc 37990980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 45395792 - 45395642
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tctct 98  Q
    |||||||||| |||||| |||| ||||| ||||| ||||||||||||||| ||||||||| |  | ||||| ||||||||||||||||||  |  |||||    
T  45395792 tcccacatcgaataaaagagtaaaggttaaacacgttataagtaagaggatccataaacccattgtcttaatgttttgggtaagagtgtggtgtctctct 45395693  T
Q  99 cacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccc 149  Q
    |||  ||| ||||| || |||||||||||||| ||||||| |||| |||||    
T  45395692 cacttgtggggttgctctagcctcgatgtggagggtctcccaaagttcccc 45395642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 25739566 - 25739413
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagctta-aggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| | ||||||||   |||||||||||||||| ||||||  |  ||||  ||||||||||||||||||||||||||||    
T  25739566 tgtcccacatcggataaaatagtaaaagttgaacatcatataagtaagaggacccataaactcattgcttttaggttttgggtaagagtgtgacgtctct 25739467  T
Q  99 ca--caagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccct 150  Q
    |   |  ||| ||| |||| ||||||||||||||||||| || || ||||||||    
T  25739466 ctagcttgtgcggtagttctagcctcgatgtggacggtcccccaaggctcccct 25739413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 43346932 - 43346775
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||||||||| | ||||||||  |  | ||||||||||||||||||||||||  ||||||    
T  43346932 tgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattgccttaaggttttgggtaagagtgtggtgtctct 43346833  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatg 154  Q
    |   |  ||| |||||||| |||||| ||||||||||||  |  ||||||||||||||    
T  43346832 cttgcttgtgcggttgttctagcctctatgtggacggtcctccgaagctcccctcatg 43346775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 22304586 - 22304686
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| |||||||| || ||||||||||||||| ||||||||  |  | ||||||||||||||||||||||||  ||||||    
T  22304586 tgtcccacatcggataaaatagtaaaggttgaataccttataagtaagaggacccataaacacattgccttaaggttttgggtaagagtgtggtgtctct 22304685  T
Q  99 c 99  Q
    |    
T  22304686 c 22304686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 39914269 - 39914369
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||| |||||||||||||||||||||||| |||||| |||||||| |||||||||||| | |||||  |||||| ||||||||||  ||||||    
T  39914269 tgtctcacatcagataaaacagtagaggttgaacaccttataaataagaggacccataaacctaatgccttaatattttggataagagtgtggtgtctct 39914368  T
Q  99 c 99  Q
    |    
T  39914369 c 39914369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 132
Target Start/End: Original strand, 8327921 - 8328060
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tct 96  Q
    ||||||||||||||||||| |||| ||| |||| |  ||||||||||||| | |||||||| ||| | ||||||||||||||||||||||||  |  |||    
T  8327921 tgtcccacatcggataaaagagtaaaggatgaatatcttataagtaagagaacccataaacgtaatgccttaaggttttgggtaagagtgtggtgtctct 8328020  T
Q  97 ctcacaagtgtg----gttgttccagcctcgatgtggacg 132  Q
    |||||||||| |    ||||||| ||||||||||||||||    
T  8328021 ctcacaagtgagtgcagttgttctagcctcgatgtggacg 8328060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 15772871 - 15773009
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||| ||||||||||| |||| | ||||||||| ||||||||||||||| ||||||||  |  || |||||||||||| ||||||||||  ||||||    
T  15772871 tgtcccatatcggataaaagagtaaatgttgaacaccttataagtaagaggacccataaactcattgctttaaggttttggataagagtgtggtgtctct 15772970  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  |||||||||||| | |||||||||||||||||    
T  15772971 cttgcttgtgtggttgttctaacctcgatgtggacggtc 15773009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 53577381 - 53577519
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| ||||||||||||||||||| ||||||||||  ||| || |||| ||| |||||||| ||  | |||||||| |||||||||||||||  ||||||    
T  53577381 tgtcacacatcggataaaacagtaaaggttgaacatcttaaaaataagtggatccataaacatattgccttaaggtcttgggtaagagtgtggtgtctct 53577480  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   ||||||||||||||| ||||||| |||||| ||||    
T  53577481 cttgcaagtgtggttgttctagcctcggtgtggatggtc 53577519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 21832484 - 21832395
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtg 88  Q
    |||||||||| ||||| || |||| ||||||||||| |||||||||||||||| |||||||  | || ||||||||||||||||||||||    
T  21832484 tgtcccacattggatagaaaagtaaaggttgaacaccttataagtaagaggactcataaactcatagccttaaggttttgggtaagagtg 21832395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 12 - 147
Target Start/End: Complemental strand, 44160674 - 44160538
Alignment:
Q  12 ggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctcacaagtgtgg 109  Q
    |||||||||| || ||||||||||| |||||| |||||||| ||||||||| |  | ||||||||||||| ||||| |||| ||||||||  |  || |     
T  44160674 ggataaaacaataaaggttgaacaccttataaataagaggatccataaacccattgtcttaaggttttgg-taagaatgtggcgtctctcttacttgcga 44160576  T
Q  110 ttgttccagcctcgatgtggacggtctccaaaagctcc 147  Q
    |||||| ||||||||||||||||||| || ||||||||    
T  44160575 ttgttctagcctcgatgtggacggtcccccaaagctcc 44160538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 1634456 - 1634318
Alignment:
Q  1 tgtcccacatcggataaaacagtaga-ggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtg--acgtc 95  Q
    |||||||||||||||| || | || | |||| ||||||||||||||||||||| ||||||||| |   ||||||||||||||||||||||| |  |  ||    
T  1634456 tgtcccacatcggatagaaaaataaaaggttaaacacattataagtaagaggacccataaacccattggcttaaggttttgggtaagagtgcggtatctc 1634357  T
Q  96 tctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |||||| | | ||||||||| |||||||||||||||||||    
T  1634356 tctcacta-tatggttgttctagcctcgatgtggacggtc 1634318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 39389087 - 39389178
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||| ||||||||||||| |||| ||||||||||| ||| || |||||||| ||||||||| |  | ||||||||||||||||||||||||    
T  39389087 tgtcctacatcggataaaatagtaaaggttgaacaccttaaaactaagaggacccataaacccattgtcttaaggttttgggtaagagtgtg 39389178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 42342227 - 42342093
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctc--a 100  Q
    ||||||||||||||| |||| | ||| ||  | |||||||||||||||| |||||||  |  || ||||||||||||||||||||||| ||||||||       
T  42342227 ccacatcggataaaagagtaaatgttcaatgccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggcgtctctcttg 42342128  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |  ||| |||||||| |||||||||||||||||||    
T  42342127 cttgtgcggttgttctagcctcgatgtggacggtc 42342093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 3384407 - 3384317
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgt 89  Q
    ||||||||||  |||||||||||| ||||| ||||| ||||||| ||||||| |||||||| ||| | ||||| |||||||||||||||||    
T  3384407 tgtcccacatatgataaaacagtataggttaaacactttataaggaagaggacccataaacttaatgccttaaagttttgggtaagagtgt 3384317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 53118107 - 53117978
Alignment:
Q  9 atcggataaaacagtagaggttgaacacattataagtaagaggaccataaacctaaagc-ttaaggttttgggtaagagtgtgacg--tctctcacaagt 105  Q
    ||||||||||| |||| ||||||||||| |||||||| ||||||    ||||| |  || ||||| ||||||||||||||||   |  ||||||||||||    
T  53118107 atcggataaaagagtaaaggttgaacaccttataagtgagaggattcaaaacccattgccttaagattttgggtaagagtgtagtgtctctctcacaagt 53118008  T
Q  106 gtggttgttccagcctcgatgtggacggtc 135  Q
    |||||||||| ||| |||||||| ||||||    
T  53118007 gtggttgttctagcatcgatgtgaacggtc 53117978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 31190034 - 31190087
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||| ||||||||    
T  31190034 tgtcccacatcggataaaagagtaaaggttgaacaccttataagttagaggacc 31190087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 47964659 - 47964559
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||| ||||||||| ||  || |||||||||| |  ||||||| |||||||| |||||||||  || ||||||||||||||||||||||| |||||||    
T  47964659 tgtcccgcatcggatagaaatgtggaggttgaacgctatataagtgagaggacccataaacctattgccttaaggttttgggtaagagtgtggcgtctct 47964560  T
Q  99 c 99  Q
    |    
T  47964559 c 47964559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 49336828 - 49336728
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| ||||||||||| || |||| ||||||| ||| ||||||||||||||| ||||||||| | || ||||| ||| ||||||||||||||  ||||||    
T  49336828 tgtctcacatcggatagaaaagtaaaggttgaccaccttataagtaagaggacccataaacccatagtcttaaagttctgggtaagagtgtggtgtctct 49336729  T
Q  99 c 99  Q
    |    
T  49336728 c 49336728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 67 - 162
Target Start/End: Complemental strand, 7766854 - 7766759
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacgtctctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    ||||||||||| ||||||| |||| ||||||||||  || ||||||||| ||||||||||| || |||| ||  || |||||||  ||||||||||    
T  7766854 cttaaggttttaggtaagattgtggcgtctctcacttgtatggttgttctagcctcgatgtagatggtccccctaaactccccttgtgacccaaca 7766759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 32462700 - 32462599
Alignment:
Q  1 tgtcccacatcggataaaacagtaga-ggttgaacacattataagtaagagga-ccataaacctaaagctt-aaggttttgggtaagagtgtgacgtctc 97  Q
    |||||||||||| || ||| |||| | |||||||||| |||||||||||| || |||||||||||  |||| |||||||||| ||||||||||  |||||    
T  32462700 tgtcccacatcgaatgaaagagtaaaaggttgaacaccttataagtaagatgatccataaacctattgctttaaggttttggataagagtgtggggtctc 32462601  T
Q  98 tc 99  Q
    ||    
T  32462600 tc 32462599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 136
Target Start/End: Complemental strand, 32463042 - 32462902
Alignment:
Q  1 tgtcccacatcggataaaacagtaga-ggttgaacacattataagtaagaggac-cataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctc 97  Q
    |||||||||||||||| || |||| | ||||||| || |||||||||||| ||| |||||||| |  || ||||||||||| |||||||||||  |||||    
T  32463042 tgtcccacatcggatagaagagtaaaaggttgaataccttataagtaagaagactcataaacccattgccttaaggttttgagtaagagtgtggtgtctc 32462943  T
Q  98 tc--acaagtgtggttgttccagcctcgatgtggacggtct 136  Q
    ||   |  ||| |||||||| |||||||||||| |||||||    
T  32462942 tcttgcttgtgcggttgttctagcctcgatgtgtacggtct 32462902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 42584963 - 42584902
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacc 61  Q
    |||||||||||||||| || |||| || |||||||| ||||||||||||||| |||||||||    
T  42584963 tgtcccacatcggatagaagagtaaagattgaacaccttataagtaagaggatccataaacc 42584902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3135214 - 3135114
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| | ||||||||| |||||||||| || | ||||||||| |  | | |||||||||| |||||||||||  ||||||    
T  3135214 tgtcccacatcggataaaatagtaaatgttgaacaccttataagtaaaagaacccataaacccactgccataaggttttgagtaagagtgtggtgtctct 3135115  T
Q  99 c 99  Q
    |    
T  3135114 c 3135114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 11661971 - 11662099
Alignment:
Q  4 cccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaagg-ttttgggtaagagtgtgacgtctctca 100  Q
    ||||||| |||||||| |||| ||||||||||| ||| |||| ||||| | |||||||| |  | ||||||| ||||||||||||||| |  |||||||     
T  11661971 cccacattggataaaagagtaaaggttgaacaccttaaaagtgagaggcctcataaaccaattgccttaaggtttttgggtaagagtgaggtgtctctct 11662070  T
Q  101 ca-agtgtggttgttccagcctcgatgtg 128  Q
    ||  |||||||||||| ||||||||||||    
T  11662071 cattgtgtggttgttctagcctcgatgtg 11662099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 98
Target Start/End: Original strand, 15773209 - 15773308
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||| |||||| |||| | ||||||||  |||||||||||||||| ||||| |  |  | ||||| ||||||||||||||||||| ||||||    
T  15773209 tgtcccacatcgaataaaagagtaaaagttgaacatcttataagtaagaggactcataagctcattgccttaaagttttgggtaagagtgtgatgtctct 15773308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 159
Target Start/End: Original strand, 25755411 - 25755572
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||| ||||||| |||| |||||||| || |||||||||||||||| |||||| | |  | | ||| ||| ||||||| |||||| |||||||    
T  25755411 tgtctcacatcagataaaagagtaaaggttgaataccttataagtaagaggactcataaatccattgtcctaaagttgtgggtaaaagtgtggcgtctct 25755510  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgaccca 159  Q
    |   |  ||| |||||||| |||||||||||||| |||| ||  || ||||||||||||||||    
T  25755511 cttgcttgtgcggttgttctagcctcgatgtggatggtcccccgaa-ctcccctcatgaccca 25755572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 70 - 100
Target Start/End: Complemental strand, 46546288 - 46546258
Alignment:
Q  70 aaggttttgggtaagagtgtgacgtctctca 100  Q
    |||||||||||||||||||||||||||||||    
T  46546288 aaggttttgggtaagagtgtgacgtctctca 46546258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 7767455 - 7767394
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacc 61  Q
    |||||||||||||||| || |||| |||||| |||| |||||| ||||||||| ||||||||    
T  7767455 tgtcccacatcggatagaaaagtaaaggttggacactttataactaagaggactcataaacc 7767394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 162
Target Start/End: Original strand, 9239927 - 9239994
Alignment:
Q  94 tctctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |||||||  ||| ||||| ||| ||||||||||||||||||| ||  ||||||||||||||| ||||||    
T  9239927 tctctcattagtatggtttttctagcctcgatgtggacggtc-ccccaagctcccctcatgatccaaca 9239994  T

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Target: chr8 (Bit Score: 60; Significance: 1e-25; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 3038431 - 3038293
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||| |||| ||||||||| |  | |||||||||||||||||||||||| | |||||    
T  3038431 tgtcccacatcggataaaatagtaaaggttgaacactttataagtaaaaggacccataaacccattgccttaaggttttgggtaagagtgtggcatctct 3038332  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   |  |||||||||||| |||||||||||||||||||    
T  3038331 cttgcttgtgtggttgttctagcctcgatgtggacggtc 3038293  T

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Target: chr8; HSP #2
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 45121797 - 45121656
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||| ||| ||||||||||||||| ||||||||||| || |||||||||||| ||||||||||||  |||||    
T  45121797 tgtcccacatcggataaaagagtaaaggttgatcaccttataagtaagaggatccataaacctacagccttaaggttttgagtaagagtgtgatatctct 45121698  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctcc 138  Q
    |  ||   || |||||||| ||||||||||||||| ||||||    
T  45121697 cttacttatggggttgttctagcctcgatgtggacagtctcc 45121656  T

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Target: chr8; HSP #3
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 162
Target Start/End: Complemental strand, 8918905 - 8918743
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaag-cttaaggttttgggtaagagtgtgacgtc--t 96  Q
    ||||||||||| ||||  | |||| ||||||||||| ||||||||||||||||| |||||||||  | |||||||||||||||||||||||||||||  |    
T  8918905 tgtcccacatcagatagcagagtaaaggttgaacactttataagtaagaggacccataaacctattgacttaaggttttgggtaagagtgtgacgtcttt 8918806  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    ||  |  |||||||||||  | ||||||||||||||||| ||   |||||||||| ||||||||||    
T  8918805 cttgcgtgtgtggttgttttaacctcgatgtggacggtcccc---agctcccctcgtgacccaaca 8918743  T

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Target: chr8; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 5420668 - 5420802
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtct-- 96  Q
    |||||||||||||||| || |||| ||||||||||  |||||||||||||||| |||||||| |  | |||||||||||  |||||||||||||||||      
T  5420668 tgtcccacatcggatagaatagtaaaggttgaacatcttataagtaagaggactcataaacccattgccttaaggttttttgtaagagtgtgacgtctcc 5420767  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggac 131  Q
    |||||  |||||||||||| |||||||||||||||    
T  5420768 ctcacttgtgtggttgttcaagcctcgatgtggac 5420802  T

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Target: chr8; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 40518599 - 40518737
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgt--ct 96  Q
    ||||||||||| |||| || |||| ||||||||||| |||||| |||||||| ||||||||| || | ||||||||||||||||||||||||||||  ||    
T  40518599 tgtcccacatcagatagaaaagtaaaggttgaacaccttataaataagaggacccataaacccaatgacttaaggttttgggtaagagtgtgacgtcact 40518698  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    ||  |  |||||||||||| |||||| ||||||||||||    
T  40518699 cttgcttgtgtggttgttctagcctcaatgtggacggtc 40518737  T

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Target: chr8; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 3 - 135
Target Start/End: Complemental strand, 1514054 - 1513918
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtg--acgtctct 98  Q
    ||||||||||||||||| |||| ||||||||||| ||||||||||||||| || |||||| | || ||||||||||||||||| ||||||  |  |||||    
T  1514054 tcccacatcggataaaagagtaaaggttgaacaccttataagtaagaggacccttaaacccataaccttaaggttttgggtaaaagtgtggtatctctct 1513955  T
Q  99 cacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
     ||| ||| |||| ||| |||||||||||||||||||    
T  1513954 tacatgtggggttattctagcctcgatgtggacggtc 1513918  T

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Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 147468 - 147568
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||||||||| |||||| |||||||| |||||||||||  | ||||| |||||||||||||||||| |||||||    
T  147468 tgtcccacatcggataaaagagtaaaggttgaacaccttataaataagaggacccataaacctattgccttaaagttttgggtaagagtgtggcgtctct 147567  T
Q  99 c 99  Q
    |    
T  147568 c 147568  T

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Target: chr8; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 3670077 - 3670214
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| ||||| ||||| ||||||||| ||||| |||||||||||    ||||||||||||||||||||||||  ||||||    
T  3670077 tgtcccacatcggataaaatagtaaaggtttaacaccttataagtatgaggacccataaacctatttccttaaggttttgggtaagagtgtggtgtctct 3670176  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggt 134  Q
    |   |  ||| |||||||| ||||||||||||||||||    
T  3670177 cttgcttgtgcggttgttctagcctcgatgtggacggt 3670214  T

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Target: chr8; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Original strand, 3669704 - 3669867
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||| ||||||| |||| ||||||||||| |||||||||||||||| |||||||  |  | ||||||||||||||||||||||||  ||||||    
T  3669704 tgtcccacatcagataaaatagtaaaggttgaacaccttataagtaagaggactcataaactcattgccttaaggttttgggtaagagtgtggtgtctct 3669803  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaac 161  Q
    |   |  ||| |||||||| |||||||||||||| |||| ||   |||||||||| |||||||||    
T  3669804 cttgcttgtgcggttgttctagcctcgatgtggatggtc-cccctagctcccctcgtgacccaac 3669867  T

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Target: chr8; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 133
Target Start/End: Original strand, 9608762 - 9608898
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||| |||||||| || |||| ||||||||||| |||||||||||| || ||||||||| |  | |||||||||||||||| ||||||| |||||||    
T  9608762 tgtcccatatcggatagaaaagtaaaggttgaacaccttataagtaagatgacccataaacccatcaccttaaggttttgggtatgagtgtggcgtctct 9608861  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacgg 133  Q
    |   | |||| |||||||| |||||||||||||||||    
T  9608862 cttgctagtgaggttgttctagcctcgatgtggacgg 9608898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 9 - 152
Target Start/End: Complemental strand, 9483320 - 9483174
Alignment:
Q  9 atcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctc--tcacaag 104  Q
    ||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||  |||||  |  |  |    
T  9483320 atcggataaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgtcttaaggttttgggtaagagtgtggtgtctcttttgctcg 9483221  T
Q  105 tgtggttgttccagcctcgatgtggacggtctccaaaagctcccctca 152  Q
    || |||||||| |||||||||||||||||| ||| | |||||||||||    
T  9483220 tgcggttgttctagcctcgatgtggacggt-tcccatagctcccctca 9483174  T

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Target: chr8; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 45122648 - 45122779
Alignment:
Q  8 catcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc--acaa 103  Q
    |||||||||||| |||| ||||||||||| ||||||||||||||| ||||||||  |  | |||||||||||||||| ||||||| ||||||||   |      
T  45122648 catcggataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttgggtatgagtgtggcgtctctcttgctt 45122747  T
Q  104 gtgtggttgttccagcctcgatgtggacggtc 135  Q
    |||||||||||| |||||||||||||| ||||    
T  45122748 gtgtggttgttcaagcctcgatgtggaaggtc 45122779  T

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Target: chr8; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 138
Target Start/End: Complemental strand, 70415 - 70274
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtc--t 96  Q
    ||||||||||||||||||| |||| | ||||||||  ||||||||||||||| ||||||||| |  | ||||||||||| |||||||||||||||||  |    
T  70415 tgtcccacatcggataaaagagtaaatgttgaacatcttataagtaagaggacccataaacccactgccttaaggttttaggtaagagtgtgacgtctat 70316  T
Q  97 ctcacaagtgtggttgttccagcctcgatgtggacggtctcc 138  Q
    ||  |  |||||||||||| | |||| ||| |||||||||||    
T  70315 cttgcttgtgtggttgttctaacctcaatgcggacggtctcc 70274  T

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Target: chr8; HSP #14
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 9309372 - 9309509
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaacctaa--agcttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||||||||||||||||| |||| | ||||||||| ||||||||||||||||| | || || |    |||||||| | |||||||||||||  ||||||    
T  9309372 tgtcccacatcggataaaagagtaaatgttgaacaccttataagtaagaggacccttaaactcattgccttaaggtgtcgggtaagagtgtggtgtctct 9309471  T
Q  99 caca-agtgtggttgttccagcctcgatgtggacggtc 135  Q
    | ||   ||||||||||| |||||||||||||||||||    
T  9309472 ctcagtatgtggttgttctagcctcgatgtggacggtc 9309509  T

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Target: chr8; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 25561957 - 25561801
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggtttt-gggtaagagtgtgacgtctc 97  Q
    ||||||||||||||||||| |||| | ||||||||| ||||||||||||||| ||||||||  |  | ||||||||||| ||||||||||||||| ||||    
T  25561957 tgtcccacatcggataaaagagtaaacgttgaacaccttataagtaagaggacccataaactcattgtcttaaggttttggggtaagagtgtgacatctc 25561858  T
Q  98 tc--acaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctca 152  Q
    ||   |  ||||||||| || |||||||||||||| |||| || | ||||| |||||    
T  25561857 tcttgcttgtgtggttgctctagcctcgatgtggaaggtcccctagagctctcctca 25561801  T

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Target: chr8; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 6 - 161
Target Start/End: Complemental strand, 37544626 - 37544469
Alignment:
Q  6 cacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaa-cctaaagcttaaggttttgggtaagagtgtgacgtc--tctcac 101  Q
    |||||||||||||| |||| ||||||||||||||||||| ||||||| ||||||| ||   |  |||||||||||||||||||||||  |||  ||| ||    
T  37544626 cacatcggataaaatagtaaaggttgaacacattataagaaagaggacccataaatccattactttaaggttttgggtaagagtgtggtgtctttcttac 37544527  T
Q  102 aagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaac 161  Q
      ||| |||||||| |||||||||||||||| || ||   || |||||||||||||||||    
T  37544526 ttgtgcggttgttctagcctcgatgtggacgatcccc--gagttcccctcatgacccaac 37544469  T

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Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30359288 - 30359388
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||||||||||| |||| | ||||||||| ||||||| ||||||| ||||||||| | || ||||||||||||||||||||||||  ||||||    
T  30359288 tgtctcacatcggataaaagagtaaatgttgaacaccttataagcaagaggacccataaacccatagccttaaggttttgggtaagagtgtggtgtctct 30359387  T
Q  99 c 99  Q
    |    
T  30359388 c 30359388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 40518103 - 40518226
Alignment:
Q  16 aaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgtctctc--acaagtgtggtt 111  Q
    |||| |||| ||||||||||| ||||||||||  ||||| ||||||| || || ||||||||||||||||||||||| ||||||||   |  ||||||||    
T  40518103 aaaaaagtaaaggttgaacaccttataagtaaatggacccataaacccaatgccttaaggttttgggtaagagtgtggcgtctctcttgcttgtgtggtt 40518202  T
Q  112 gttccagcctcgatgtggacggtc 135  Q
    |||| ||||| |||||||||||||    
T  40518203 gttctagccttgatgtggacggtc 40518226  T

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Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 41416312 - 41416249
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaaccta 63  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||| |||||||||||    
T  41416312 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggatccataaaccta 41416249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 34834893 - 34835026
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||| |||||||| |||| ||||| ||||| |||||||||||| ||| |||||||  |  | ||||||||||||||||||||||||  ||||||    
T  34834893 tgtcccacattggataaaatagtaaaggttaaacaccttataagtaagatgactcataaactcattgccttaaggttttgggtaagagtgtggtgtctct 34834992  T
Q  99 c--acaagtgtggttgttccagcctcgatgtgga 130  Q
    |   |  |||||||||||| ||||||||||||||    
T  34834993 cttgcttgtgtggttgttctagcctcgatgtgga 34835026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 99
Target Start/End: Original strand, 30359626 - 30359726
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaaccta-aagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||| ||||||| |||| | ||||||||| |||||||||||||||| |||||||| | || |||||| |||||||||||||||||  ||||||    
T  30359626 tgtctcacatcagataaaagagtaaaagttgaacaccttataagtaagaggactcataaacccataaccttaagattttgggtaagagtgtggtgtctct 30359725  T
Q  99 c 99  Q
    |    
T  30359726 c 30359726  T

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Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 45122198 - 45122067
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaac-ctaaagcttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||| |||||||||||||| |||| ||||||||||| ||||||||||||| | |||||||| |     ||||||||||||||||||||||||  ||||||    
T  45122198 tgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagagaacccataaactcattttcttaaggttttgggtaagagtgtggtgtctct 45122099  T
Q  99 c--acaagtgtggttgttccagcctcgatgtg 128  Q
    |  ||  ||| |||||||| ||||||||||||    
T  45122098 cttacttgtggggttgttctagcctcgatgtg 45122067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 90
Target Start/End: Original strand, 34835226 - 34835317
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||||||||| ||||||| |||| ||||||||||| ||||||||||||||| ||||||||  |  | ||||| ||||||||||||||||||    
T  34835226 tgtcccacatccgataaaatagtaaaggttgaacaccttataagtaagaggacccataaactcattgccttaaagttttgggtaagagtgtg 34835317  T

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Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 45122051 - 45121952
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||||| |||||| |||| ||||||||||| |||||||||||||||| |||||||  |  | |||||| |||||||||| |||||| |||||||    
T  45122051 tgtcccacatcgcataaaatagtaaaggttgaacactttataagtaagaggactcataaactcattgccttaagattttgggtaacagtgtggcgtctct 45121952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 5 - 162
Target Start/End: Complemental strand, 18372131 - 18371970
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtgacg--tctctca 100  Q
    |||||||  |||||| |||| ||||||||||| ||||||||||||||| ||||||||  |  || |||||||||||||||||||||||  |  ||||||     
T  18372131 ccacatccaataaaatagtaaaggttgaacaccttataagtaagaggatccataaactcattgctttaaggttttgggtaagagtgtggtgtttctctcg 18372032  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |  ||| ||||| || |||||| ||||| |||||  ||   |||||||||||||||||||||    
T  18372031 cttgtgcggttgctctagcctcaatgtgaacggttcccccgagctcccctcatgacccaaca 18371970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 131
Target Start/End: Original strand, 30441098 - 30441236
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacac----attataagtaagaggacc-ataaacctaaagc-ttaaggttttgggtaagagtgtgacgt 94  Q
    ||||||||||||| ||||| |||| |||||||||||    ||||||||||||||| || ||||||| |  || |||||||||||||||||||||||  ||    
T  30441098 tgtcccacatcggctaaaatagtaaaggttgaacaccttaattataagtaagagggcccataaacccattgccttaaggttttgggtaagagtgtggtgt 30441197  T
Q  95 ctctc--acaagtgtggttgttccagcctcgatgtggac 131  Q
    |||||   |  ||| |||||||| |||||||||||||||    
T  30441198 ctctcttgcttgtgcggttgttctagcctcgatgtggac 30441236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 6 - 90
Target Start/End: Complemental strand, 43274915 - 43274829
Alignment:
Q  6 cacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    |||||| ||||||| |||| |||||||| | |||||||||||||||| |||||||||||  | |||||||||||| |||||||||||    
T  43274915 cacatcagataaaagagtaaaggttgaatatattataagtaagaggacccataaacctattgtcttaaggttttgagtaagagtgtg 43274829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 8794128 - 8794217
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaa-agcttaaggttttgggtaagagtg 88  Q
    |||| |||||||||||||| | || | ||||||||  |||||||||||||||| ||||||||||| | ||||||||||||||| ||||||    
T  8794128 tgtctcacatcggataaaagaataaatgttgaacatcttataagtaagaggactcataaacctaatatcttaaggttttgggtgagagtg 8794217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 98
Target Start/End: Original strand, 9507817 - 9507898
Alignment:
Q  19 acagtagaggttgaacacattataagtaagaggac-cataaacctaa-agcttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||| |||||||| || |||||||||||||||| |||||||| |  | |||||||||||||||||||||||| |||||||    
T  9507817 acagtaaaggttgaataccttataagtaagaggactcataaacccattaccttaaggttttgggtaagagtgtggcgtctct 9507898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18372840 - 18372787
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  18372840 tgtcacacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 18372787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25561785 - 25561736
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagag 50  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||||    
T  25561785 tgtcccacatcggataaaagagtaaaggttgaacaccttataagtaagag 25561736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 12 - 90
Target Start/End: Complemental strand, 40579636 - 40579556
Alignment:
Q  12 ggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaagc-ttaaggttttgggtaagagtgtg 90  Q
    |||||||| |||| ||||||||||| ||||||||||||||| |||||||| ||  || |||||||||| ||||||||||||    
T  40579636 ggataaaatagtaaaggttgaacaccttataagtaagaggacccataaacttattgctttaaggttttaggtaagagtgtg 40579556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 33113508 - 33113370
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    ||||| ||||||||||||| |||| |||||||||   ||||||||||||||| ||||||||  |  | |||||| |||||||||||||||||  ||||||    
T  33113508 tgtcctacatcggataaaatagtaaaggttgaacgtcttataagtaagaggacccataaactcattgccttaagattttgggtaagagtgtggtgtctct 33113409  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |   | ||||||||||||| || ||| ||| ||||||||    
T  33113408 cttgctagtgtggttgttctaggctcaatgcggacggtc 33113370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 2 - 135
Target Start/End: Complemental strand, 6877002 - 6876865
Alignment:
Q  2 gtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacg--tctc 97  Q
    |||||||||||||||||| |||| ||||||||||| |||||| ||||| || ||||| ||  |  | |||| |||||||||||||||||||  |  ||||    
T  6877002 gtcccacatcggataaaaaagtaaaggttgaacaccttataaataagatgacccatacactcattgtcttagggttttgggtaagagtgtggtgtttctc 6876903  T
Q  98 tcacaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |     |||||||||||| |||||||||||||||||||    
T  6876902 ttgtttgtgtggttgttctagcctcgatgtggacggtc 6876865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 18371797 - 18371635
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaagcttaaggttttgggtaagagtgtg--acgtctc 97  Q
    |||| |||||||||||||| |||| ||||||||||     ||||||||| |||| ||||||| |   ||||||||||||||||||||||||    |||||    
T  18371797 tgtcacacatcggataaaatagtaaaggttgaacat----taagtaagaagacccataaacccatgccttaaggttttgggtaagagtgtggtgtgtctc 18371702  T
Q  98 tcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaacatt 164  Q
    |||   ||| ||||| || ||| ||||||||||||||  ||   ||||| |||||||||||||||||    
T  18371701 tcatttgtgcggttgctctagcttcgatgtggacggttcccccgagctctcctcatgacccaacatt 18371635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 9482741 - 9482692
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||||| |||||||| |||| ||||||||||| |||||||||||||||||    
T  9482741 ccacatgggataaaagagtaaaggttgaacaccttataagtaagaggacc 9482692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 18372397 - 18372344
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||| ||||    
T  18372397 tgtctcacatcggataaaatagtaaaggttgaacaccttataagtaagaagacc 18372344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 90
Target Start/End: Complemental strand, 18380156 - 18380067
Alignment:
Q  3 tcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaaccta-aagcttaaggttttgggtaagagtgtg 90  Q
    |||||||||| |||||| |||| ||||||||||| ||||||||||| || || ||||||| |  | |||||||||||| |||||||||||    
T  18380156 tcccacatcgaataaaatagtaaaggttgaacaccttataagtaagggggcctataaacccactaccttaaggttttgagtaagagtgtg 18380067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 41972175 - 41972343
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggtt---ttgggtaagagtgtgacgt- 94  Q
    |||||||||||||||| || |||| ||||||||||| |||||||| | |||| ||||||||| |  | | ||| |||   ||||||||||||||| |||     
T  41972175 tgtcccacatcggatagaaaagtaaaggttgaacaccttataagtgataggacccataaacccattgccataaagttttgttgggtaagagtgtggcgtc 41972274  T
Q  95 -ctctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaacatt 164  Q
     ||||  |  ||||||||||||||||||| || ||||||||||||  || |||||| ||||||||||||||    
T  41972275 actcttgcttgtgtggttgttccagcctcaatatggacggtctcccgaa-ctcccc-catgacccaacatt 41972343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 130
Target Start/End: Complemental strand, 1014380 - 1014253
Alignment:
Q  7 acatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaac-ctaaagcttaaggttttgggtaagagtgtgacgtctctc--aca 102  Q
    ||||| ||||||| |||| ||||||||||| ||||||||||||||| || ||||| |   | ||||| ||||||||||||||||||  |||||||   |     
T  1014380 acatcagataaaatagtaaaggttgaacaccttataagtaagaggacccgtaaactcgttaccttaaagttttgggtaagagtgtggtgtctctcctgct 1014281  T
Q  103 agtgtggttgttccagcctcgatgtgga 130  Q
     ||| |||||||| ||||||||||||||    
T  1014280 tgtgcggttgttctagcctcgatgtgga 1014253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18373072 - 18373020
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac 53  Q
    |||||||| |||||||||| |||| ||||||||||| |||||| |||||||||    
T  18373072 tgtcccacttcggataaaatagtaaaggttgaacaccttataaataagaggac 18373020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 99
Target Start/End: Complemental strand, 20870710 - 20870614
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    ||||||| ||||||| |||| ||||||||||  ||||||||||||||| ||||||||| |  | |||||| |||||| ||||||||||  |||||||    
T  20870710 ccacatcagataaaatagtaaaggttgaacatcttataagtaagaggacccataaacccactgccttaagattttggataagagtgtggtgtctctc 20870614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 10 - 96
Target Start/End: Original strand, 32305503 - 32305591
Alignment:
Q  10 tcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaaccta-aagcttaaggttttgggtaagagtgtgacgtct 96  Q
    |||||||||| |||| ||||||||||| |||||||||||| |||| ||||||| |  | |||||| |||||| |||||||||| |||||    
T  32305503 tcggataaaatagtaaaggttgaacaccttataagtaagaagacctataaacccattaccttaagattttggataagagtgtggcgtct 32305591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 5 - 163
Target Start/End: Complemental strand, 1014008 - 1013846
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggacc-ataaacctaaag-cttaaggttttgggtaagagtgtgacgtctc--tca 100  Q
    ||||||||||||||| |||| | |||||||||  |||||||||||||||| ||||||| |  | ||||  |||||| |||||||||||  |||||  | |    
T  1014008 ccacatcggataaaatagtaaaagttgaacaccctataagtaagaggaccaataaacccattgccttagagttttgagtaagagtgtgttgtctctttta 1013909  T
Q  101 caagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaacat 163  Q
    |  ||| |||||||| |||||||||||||| ||| |||   ||||||||  |||| |||||||    
T  1013908 cttgtgcggttgttctagcctcgatgtggatggtttcctcgagctccccaaatgatccaacat 1013846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 135
Target Start/End: Original strand, 41129073 - 41129143
Alignment:
Q  67 cttaaggttttgggtaagagtgtgacgtctctc--acaagtgtggttgttccagcctcgatgtggacggtc 135  Q
    |||||||||||||||| |||||||  |||||||  ||  |||||||||||| | |||||||||||||||||    
T  41129073 cttaaggttttgggtatgagtgtggtgtctctcttacttgtgtggttgttcaaacctcgatgtggacggtc 41129143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 90
Target Start/End: Complemental strand, 18372734 - 18372656
Alignment:
Q  10 tcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaagcttaaggttttgggtaagagtgtg 90  Q
    |||||||||| |||| ||||||||||| |||||||||||||||| |||||||| |  ||   ||||||||||||||||||||    
T  18372734 tcggataaaatagtaaaggttgaacac-ttataagtaagaggactcataaacccattgc--caggttttgggtaagagtgtg 18372656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 3037845 - 3037788
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacc 61  Q
    ||||||||||| ||| |||| | ||||||||| |||||||||||||||| ||||||||    
T  3037845 ccacatcggatgaaatagtaaatgttgaacaccttataagtaagaggactcataaacc 3037788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 49; Significance: 5e-19; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 283 - 223
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggaccataaacc 61  Q
    ||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||||    
T  283 tgtcccacatcggataaaatagtaaaggttgaacaccttataagtaagaggaccataaacc 223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 655 - 564
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtg 90  Q
    ||||||||||||| ||||| |||| ||||||||||| ||||||||||||||| ||||||||| |  | ||||||||||||||||||||||||    
T  655 tgtcccacatcggttaaaagagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaaggttttgggtaagagtgtg 564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 99
Target Start/End: Original strand, 5378 - 5474
Alignment:
Q  5 ccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaaggttttgggtaagagtgtgacgtctctc 99  Q
    |||||||||||| ||||||| ||||||||||| ||||||||||||||| ||||||||| |  | |||||| |||||| ||||||||||  |||||||    
T  5378 ccacatcggatagaacagtaaaggttgaacaccttataagtaagaggacccataaacccattgccttaagattttggataagagtgtggtgtctctc 5474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 134
Target Start/End: Complemental strand, 1247 - 1110
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggac-cataaacctaaag-cttaaggttttgggtaagagtgtgacgtctct 98  Q
    |||||||||| |||||||| |||| ||||||||||| ||||||| || ||||| |||||||| |  | ||||||||||||||||||||| ||  ||||||    
T  1247 tgtcccacattggataaaagagtaaaggttgaacaccttataagaaaaaggactcataaacccattgccttaaggttttgggtaagagtatggtgtctct 1148  T
Q  99 c--acaagtgtggttgttccagcctcgatgtggacggt 134  Q
    |       ||||||||||| ||||||||||||||||||    
T  1147 cttgtttatgtggttgttctagcctcgatgtggacggt 1110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 1727 - 1660
Alignment:
Q  94 tctctcacaagtgtggttgttccagcctcgatgtggacggtctccaaaagctcccctcatgacccaaca 162  Q
    |||| ||||||||||||||||| ||||||||||||| | ||| ||   |||||||||| ||||||||||    
T  1727 tctcacacaagtgtggttgttctagcctcgatgtgggcagtc-cccctagctcccctcgtgacccaaca 1660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5794 - 5847
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||| |||||||||||||| |||| ||||||||||| |||||||||||||||||    
T  5794 tgtcgcacatcggataaaatagtaaaggttgaacaccttataagtaagaggacc 5847  T

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Target: scaffold0734; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 5413 - 5463
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagg 51  Q
    ||||| ||||||||||||| |||| ||||||||||| ||||||||||||||    
T  5413 tgtcctacatcggataaaatagtaaaggttgaacaccttataagtaagagg 5463  T

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Target: scaffold0171 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 17597 - 17507
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagagga-ccataaacctaaag-cttaagg--ttttgggtaagagt 87  Q
    |||| |||||| ||||||| |||| ||||||||||| || |||||||||||| ||||||||| | || |||||||  ||||||||||||||    
T  17597 tgtcacacatcagataaaatagtaaaggttgaacaccttgtaagtaagaggacccataaacccatagccttaaggttttttgggtaagagt 17507  T

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Target: scaffold0504 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 10252 - 10199
Alignment:
Q  1 tgtcccacatcggataaaacagtagaggttgaacacattataagtaagaggacc 54  Q
    |||| ||||||||||||||  ||| | ||||||||| |||||||||||||||||    
T  10252 tgtctcacatcggataaaatggtaaaagttgaacaccttataagtaagaggacc 10199  T

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