View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7976_high_11 (Length: 275)
Name: NF7976_high_11
Description: NF7976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7976_high_11 |
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Alignment Details
Target: chr2 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 268
Target Start/End: Original strand, 35603202 - 35603469
Alignment:
| Q |
1 |
atcatcaaatttcatatgatactcatgtgagtgatactttgcatgatatagggttccttgagaagatccatacatatacggcatgattcctgagtaacag |
100 |
Q |
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| T |
35603202 |
atcatcaaatttcatatgatactcatgtgagtgatactttgcatgatatagggttccttgagaagatccatacatatacggcatgattcctgagtaacag |
35603301 |
T |
|
| Q |
101 |
atttaattaagattttctttccaacgcgagaaagaatccaacacttcaaaattgacacttatttacaaattctacgttttaggtaagcaaaagtggtctt |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
35603302 |
atttaattaagattttctttccaacgcgagaaagaatccaacacttcaaaattgacacttatttacaaattctacgttttaggtaagcgaaagtggtctt |
35603401 |
T |
|
| Q |
201 |
cttaatatgccccaccatggaagggagacttggatatttttggctaccaatattaccagcaacaccaa |
268 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
35603402 |
cttaatatgccccaccatggaagggagacttggatatttttggctaccaatattaccaacaacaccaa |
35603469 |
T |
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