View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7976_high_12 (Length: 273)
Name: NF7976_high_12
Description: NF7976
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7976_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 21618298 - 21618044
Alignment:
| Q |
1 |
aaaagtaaagcactcaatttagcgagtcaatctgtccacaagtttgtcggaatcatttggattcaaccaccatgagacccccattcagtccacaattata |
100 |
Q |
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| T |
21618298 |
aaaagtaaagcactcaatttagcgagtcaatctgtccacaagtttgtccgaatcatttggtttcaaccaccatgagacccccattcagtccacaattata |
21618199 |
T |
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| Q |
101 |
gccctgcacattaacaaacaaatgaagctctcttatactataaagttgagaatggtgcattgtttaaaagttagaaacaattcgagactgtaaatttggg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
21618198 |
gccctgcacattaacaaacaaatgaagctctcttatactataaagttgagagcgttgcattgtttaaaagttagaaacaattcaagactgtaaatttggg |
21618099 |
T |
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| Q |
201 |
aacctcaatgtcatagaattttaagtagaaacgtgacttaggcaccaacaacatg |
255 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21618098 |
aacctcaatgtcatagaattttaagtagaaacgtgacttaggcaccaacaacatg |
21618044 |
T |
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