View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7980_low_12 (Length: 273)
Name: NF7980_low_12
Description: NF7980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7980_low_12 |
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Alignment Details
Target: chr6 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 14 - 256
Target Start/End: Complemental strand, 34754064 - 34753822
Alignment:
| Q |
14 |
gaaaacacataaaataaccaactattaattaaaagaaggtttctaagtgcaaaagaacgacaacttaatagccctcgctataaacgacaataatttacca |
113 |
Q |
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| T |
34754064 |
gaaaacacataaaataacaaactattatataaaagaaggtttctaagtgcaaaagaacgacaacttaatagccctcgctataaacgacaataatttacca |
34753965 |
T |
|
| Q |
114 |
ggactggtgagttgtaagcaattggtttatgattaggtaataattcaactgaaaagagaagcagccacaatatagtctagcaa-aaaatgtaaatctcaa |
212 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
34753964 |
ggactggtgagttgtaagcaattggtttatgattaggtaataattcaactgaaaagagaagcagccacaatatagtctagcaaaaaaatgtaaatctcaa |
34753865 |
T |
|
| Q |
213 |
ttttttgtaaaacttgaaatcctaaaacacagtttaagatcatt |
256 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
34753864 |
ttttttgtaaaacttgaaatcctaaaacacag-ttaagatcatt |
34753822 |
T |
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