View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7980_low_4 (Length: 441)

Name: NF7980_low_4
Description: NF7980
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7980_low_4
NF7980_low_4
[»] chr1 (47 HSPs)
chr1 (15-415)||(19554222-19554629)
chr1 (343-415)||(50358994-50359066)
chr1 (335-415)||(45193227-45193307)
chr1 (264-332)||(50119000-50119071)
chr1 (264-332)||(43021593-43021664)
chr1 (265-329)||(19564125-19564191)
chr1 (339-409)||(35284167-35284237)
chr1 (264-329)||(23991235-23991303)
chr1 (264-329)||(47469044-47469112)
chr1 (264-300)||(7491824-7491860)
chr1 (264-300)||(11333727-11333763)
chr1 (264-300)||(11491748-11491784)
chr1 (264-300)||(11860105-11860141)
chr1 (264-332)||(16997230-16997301)
chr1 (265-329)||(45416150-45416217)
chr1 (264-299)||(7000933-7000968)
chr1 (340-410)||(28281976-28282046)
chr1 (340-409)||(9293642-9293711)
chr1 (264-329)||(25036233-25036301)
chr1 (264-329)||(25041445-25041513)
chr1 (264-329)||(31124609-31124677)
chr1 (264-329)||(36666547-36666615)
chr1 (264-309)||(37280755-37280800)
chr1 (264-300)||(17058767-17058803)
chr1 (264-300)||(24499788-24499824)
chr1 (264-300)||(34562758-34562794)
chr1 (338-414)||(42866276-42866352)
chr1 (264-329)||(51942326-51942394)
chr1 (264-306)||(24875027-24875070)
chr1 (264-306)||(26909841-26909884)
chr1 (340-411)||(44257770-44257841)
chr1 (263-329)||(8865885-8865955)
chr1 (340-414)||(20725983-20726057)
chr1 (340-373)||(1846965-1846998)
chr1 (338-414)||(3252224-3252300)
chr1 (263-300)||(3742287-3742324)
chr1 (338-375)||(16914558-16914595)
chr1 (264-329)||(18607780-18607848)
chr1 (264-300)||(19063303-19063340)
chr1 (340-373)||(37034948-37034981)
chr1 (264-308)||(41927030-41927075)
chr1 (267-300)||(44546120-44546153)
chr1 (264-329)||(12374484-12374552)
chr1 (263-309)||(15390273-15390321)
chr1 (264-296)||(39670800-39670832)
chr1 (273-305)||(44245411-44245443)
chr1 (337-373)||(45774757-45774793)
[»] chr7 (34 HSPs)
chr7 (264-331)||(25155570-25155640)
chr7 (264-309)||(40518860-40518906)
chr7 (264-329)||(36932004-36932072)
chr7 (264-299)||(41331050-41331085)
chr7 (265-306)||(4886895-4886936)
chr7 (263-300)||(7778966-7779003)
chr7 (263-295)||(14819118-14819150)
chr7 (263-295)||(15266116-15266148)
chr7 (263-295)||(15272901-15272933)
chr7 (264-300)||(22774103-22774139)
chr7 (338-414)||(36858131-36858207)
chr7 (264-300)||(45284790-45284826)
chr7 (264-300)||(49089563-49089599)
chr7 (339-410)||(9822518-9822589)
chr7 (339-410)||(10724443-10724514)
chr7 (264-328)||(31727762-31727829)
chr7 (264-295)||(38151412-38151443)
chr7 (265-329)||(41465865-41465932)
chr7 (340-414)||(11734271-11734345)
chr7 (340-410)||(16560919-16560989)
chr7 (340-410)||(16604673-16604743)
chr7 (340-414)||(29983235-29983309)
chr7 (264-329)||(1398874-1398942)
chr7 (264-329)||(27424870-27424938)
chr7 (273-306)||(41853696-41853729)
chr7 (263-296)||(44831592-44831625)
chr7 (264-292)||(12935811-12935839)
chr7 (264-300)||(22548274-22548310)
chr7 (337-369)||(30801674-30801706)
chr7 (340-372)||(34191974-34192006)
chr7 (264-300)||(41854060-41854096)
chr7 (337-373)||(43779816-43779852)
chr7 (263-295)||(47194394-47194426)
chr7 (264-300)||(47437997-47438033)
[»] chr3 (33 HSPs)
chr3 (264-329)||(44764753-44764819)
chr3 (264-329)||(19222557-19222625)
chr3 (264-329)||(24303421-24303489)
chr3 (264-322)||(32401529-32401589)
chr3 (264-329)||(54769801-54769869)
chr3 (340-414)||(15100604-15100678)
chr3 (263-329)||(43280099-43280168)
chr3 (340-414)||(55258113-55258187)
chr3 (264-329)||(5173981-5174049)
chr3 (341-414)||(11412521-11412594)
chr3 (263-300)||(40192219-40192256)
chr3 (263-300)||(41411597-41411634)
chr3 (264-329)||(49284853-49284921)
chr3 (264-300)||(7253491-7253527)
chr3 (264-329)||(46844942-46845010)
chr3 (264-300)||(49443394-49443430)
chr3 (264-329)||(52992030-52992098)
chr3 (273-308)||(16906818-16906853)
chr3 (263-329)||(30779536-30779606)
chr3 (340-414)||(42217190-42217264)
chr3 (264-329)||(31586978-31587047)
chr3 (264-329)||(38949705-38949773)
chr3 (264-329)||(4227715-4227783)
chr3 (342-410)||(6101953-6102021)
chr3 (263-299)||(11995195-11995231)
chr3 (264-296)||(26880244-26880276)
chr3 (264-314)||(33606910-33606962)
chr3 (273-312)||(42359878-42359918)
chr3 (263-295)||(44685138-44685170)
chr3 (264-300)||(46817322-46817358)
chr3 (264-296)||(49577436-49577468)
chr3 (268-296)||(52309085-52309113)
chr3 (264-296)||(53203891-53203923)
[»] scaffold0045 (1 HSPs)
scaffold0045 (340-409)||(29531-29600)
[»] chr6 (17 HSPs)
chr6 (264-329)||(6419054-6419121)
chr6 (264-300)||(29646519-29646555)
chr6 (338-414)||(6817288-6817364)
chr6 (264-300)||(8443602-8443638)
chr6 (264-300)||(8452406-8452442)
chr6 (263-329)||(15963912-15963982)
chr6 (263-329)||(17534878-17534947)
chr6 (340-414)||(30269593-30269667)
chr6 (264-329)||(607018-607086)
chr6 (340-373)||(23595691-23595724)
chr6 (264-329)||(24319044-24319112)
chr6 (263-300)||(31952332-31952369)
chr6 (264-300)||(1435872-1435908)
chr6 (337-373)||(22351314-22351350)
chr6 (274-306)||(28021289-28021321)
chr6 (264-300)||(31104945-31104981)
chr6 (264-300)||(34574125-34574161)
[»] chr5 (31 HSPs)
chr5 (264-332)||(4068010-4068081)
chr5 (338-413)||(814803-814878)
chr5 (263-300)||(831652-831689)
chr5 (263-300)||(17064828-17064865)
chr5 (264-329)||(39234710-39234778)
chr5 (265-300)||(14804954-14804989)
chr5 (264-306)||(20145535-20145578)
chr5 (264-306)||(24477881-24477924)
chr5 (340-414)||(17421303-17421377)
chr5 (337-413)||(18942246-18942322)
chr5 (273-329)||(7545378-7545437)
chr5 (264-306)||(11541745-11541788)
chr5 (264-329)||(33018497-33018564)
chr5 (265-306)||(23292389-23292431)
chr5 (263-308)||(40276412-40276458)
chr5 (263-296)||(34208441-34208474)
chr5 (263-329)||(35241427-35241496)
chr5 (264-300)||(3198390-3198426)
chr5 (264-292)||(4238278-4238306)
chr5 (264-296)||(7171795-7171827)
chr5 (264-300)||(8571856-8571892)
chr5 (264-300)||(10364364-10364400)
chr5 (264-300)||(12891620-12891656)
chr5 (265-297)||(15210856-15210888)
chr5 (264-329)||(21749348-21749416)
chr5 (264-292)||(29646084-29646112)
chr5 (264-300)||(32550239-32550275)
chr5 (264-329)||(36270772-36270840)
chr5 (264-296)||(37553896-37553928)
chr5 (264-296)||(37684517-37684549)
chr5 (271-329)||(41083516-41083576)
[»] chr4 (40 HSPs)
chr4 (264-332)||(55055944-55056015)
chr4 (265-329)||(12625860-12625927)
chr4 (264-329)||(51890828-51890896)
chr4 (264-300)||(49264589-49264625)
chr4 (264-297)||(42664047-42664080)
chr4 (264-300)||(2629642-2629678)
chr4 (339-415)||(11792383-11792459)
chr4 (268-300)||(23695147-23695179)
chr4 (264-329)||(29406388-29406456)
chr4 (264-300)||(31852412-31852448)
chr4 (264-300)||(38848091-38848127)
chr4 (264-296)||(42002373-42002405)
chr4 (264-300)||(43905773-43905809)
chr4 (264-300)||(53921478-53921514)
chr4 (264-329)||(3784943-3785010)
chr4 (339-374)||(26203746-26203781)
chr4 (265-300)||(45139853-45139888)
chr4 (340-414)||(4414415-4414489)
chr4 (264-298)||(21863856-21863890)
chr4 (264-298)||(21919717-21919751)
chr4 (276-306)||(45303967-45303997)
chr4 (263-329)||(45849078-45849148)
chr4 (265-307)||(47678566-47678608)
chr4 (264-308)||(9764994-9765039)
chr4 (264-329)||(11294809-11294877)
chr4 (263-300)||(21116848-21116885)
chr4 (264-300)||(22788644-22788681)
chr4 (273-309)||(32955278-32955315)
chr4 (264-297)||(42081801-42081834)
chr4 (264-300)||(2688159-2688195)
chr4 (264-328)||(5165889-5165956)
chr4 (264-296)||(29256959-29256991)
chr4 (338-374)||(29695501-29695537)
chr4 (338-414)||(32988268-32988344)
chr4 (272-300)||(42044025-42044053)
chr4 (264-300)||(44040422-44040458)
chr4 (264-303)||(50730329-50730369)
chr4 (264-329)||(51777875-51777943)
chr4 (264-306)||(54534882-54534926)
chr4 (263-329)||(56479197-56479265)
[»] chr8 (29 HSPs)
chr8 (264-329)||(12770399-12770467)
chr8 (264-300)||(481074-481110)
chr8 (266-332)||(2114912-2114980)
chr8 (264-306)||(43846991-43847034)
chr8 (264-298)||(15856477-15856511)
chr8 (263-329)||(44444575-44444644)
chr8 (264-300)||(22274582-22274618)
chr8 (264-306)||(17027851-17027894)
chr8 (264-306)||(17558287-17558330)
chr8 (340-403)||(24279643-24279706)
chr8 (269-329)||(26796989-26797051)
chr8 (263-298)||(36433601-36433636)
chr8 (265-296)||(38283191-38283222)
chr8 (264-298)||(3949052-3949086)
chr8 (340-414)||(19726742-19726816)
chr8 (340-410)||(27845956-27846026)
chr8 (340-410)||(36823475-36823545)
chr8 (340-414)||(42063462-42063536)
chr8 (264-298)||(44088927-44088961)
chr8 (264-329)||(11231451-11231519)
chr8 (263-329)||(20872429-20872497)
chr8 (264-329)||(25812180-25812248)
chr8 (264-329)||(31406788-31406856)
chr8 (340-425)||(36833904-36833989)
chr8 (264-329)||(41458326-41458394)
chr8 (341-414)||(44056531-44056604)
chr8 (268-300)||(3828380-3828412)
chr8 (264-300)||(31712612-31712648)
chr8 (338-414)||(41726387-41726463)
[»] scaffold0154 (1 HSPs)
scaffold0154 (264-300)||(28792-28828)
[»] chr2 (22 HSPs)
chr2 (264-300)||(3596313-3596349)
chr2 (339-407)||(12340395-12340463)
chr2 (265-329)||(44558033-44558100)
chr2 (339-414)||(18540657-18540732)
chr2 (340-410)||(37254867-37254937)
chr2 (264-297)||(22333841-22333874)
chr2 (263-300)||(43146419-43146456)
chr2 (264-300)||(1964416-1964452)
chr2 (264-329)||(13242702-13242770)
chr2 (264-300)||(20919673-20919709)
chr2 (340-415)||(24128753-24128828)
chr2 (339-414)||(35305325-35305400)
chr2 (340-414)||(17513020-17513094)
chr2 (264-329)||(3287027-3287095)
chr2 (271-330)||(3439340-3439401)
chr2 (264-300)||(5613017-5613054)
chr2 (340-373)||(10810628-10810661)
chr2 (337-414)||(23293215-23293292)
chr2 (265-329)||(3154028-3154095)
chr2 (264-300)||(4878272-4878308)
chr2 (337-373)||(21800753-21800789)
chr2 (268-300)||(41246449-41246481)
[»] scaffold1005 (1 HSPs)
scaffold1005 (264-306)||(2888-2931)
[»] scaffold0036 (1 HSPs)
scaffold0036 (340-411)||(51909-51980)
[»] scaffold0231 (1 HSPs)
scaffold0231 (340-414)||(11062-11136)
[»] scaffold0519 (1 HSPs)
scaffold0519 (264-329)||(2933-3001)
[»] scaffold0257 (1 HSPs)
scaffold0257 (263-300)||(21857-21894)
[»] scaffold0009 (1 HSPs)
scaffold0009 (264-300)||(41624-41660)


Alignment Details
Target: chr1 (Bit Score: 276; Significance: 1e-154; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 15 - 415
Target Start/End: Complemental strand, 19554629 - 19554222
Alignment:
Q  15 tattcgggttagggttagggtttagttgaggtgacggtggtgacagggaaggtggagtgaaataaaaatgaggatccatcacactaacactacgaaaacg 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19554629 tattcgggttagggttagggtttagttgaggtgacggtggtgacagggaaggtggagtgaaataaaaatgaggatccatcacactaacactacgaaaacg 19554530  T
Q  115 ccagctctcttatgcgccgccgtccaccgccactaatgccaccgttcagtttcaccggagaagaaggttccgtgtttttcgaatattgtttctagtctat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19554529 ccagctctcttatgcgccgccgtccaccgccactaatgccaccgttcagtttcaccggagaagaaggttcagtgtttttcgaatattgtttctagtctat 19554430  T
Q  215 ttttacttacnnnnnnntaatacaaatattgcannnnnnnnnnncaagactcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatccgacc 313  Q
    ||||||||||       ||||||||||||| ||           ||||||||||| ||||||||||||||||||| ||||||| |||||||||||||| |    
T  19554429 ttttacttacaaaaaaataatacaaatattaca--tttttttttcaagactcacaaaattaaatgtggagaagtgaggtgtccggggttcgaatccga-c 19554333  T
Q  314 ctgcataaaatatgcattg---------actgaaccatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtc 404  Q
    |||||||||||||||||||         ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||| ||    
T  19554332 ctgcataaaatatgcattgttactaccaactgaaccatagttttaaaactcggctcgatgatcgactcggtgaggttactggatcactgagtcattgatc 19554233  T
Q  405 gaaccactgaa 415  Q
    |||||||||||    
T  19554232 gaaccactgaa 19554222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 343 - 415
Target Start/End: Complemental strand, 50359066 - 50358994
Alignment:
Q  343 agttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactgaa 415  Q
    |||||||||| |||| ||||||||||||||| ||||||| || | ||||||||||||||||||||||||||||    
T  50359066 agttttaaaattcggttcgatgatcgactcggtgaggttactaggtcactgagtcattggtcgaaccactgaa 50358994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 335 - 415
Target Start/End: Complemental strand, 45193307 - 45193227
Alignment:
Q  335 tgaaccatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactgaa 415  Q
    |||| |||||||||||||||||||||||| |||||||||   ||| | |||| |||||| |||||||||||||||||||||    
T  45193307 tgaatcatagttttaaaactcggctcgatcatcgactcggcaagggtgctgggtcactgggtcattggtcgaaccactgaa 45193227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 50119071 - 50119000
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaa-tccga-ccctgcataaaatatgcattg 332  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||||||||||||| ||||    
T  50119071 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaactccgacccctgcataaaatatggattg 50119000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 43021593 - 43021664
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg-ggttcgaa-tccga-ccctgcataaaatatgcattg 332  Q
    ||||||| ||||||||||||||||||||||||||| ||||||||  |||| |||||||||||||||||||||    
T  43021593 ctcacacgattaaatgtggagaagtggggtgtccgaggttcgaaccccgacccctgcataaaatatgcattg 43021664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 19564125 - 19564191
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtccg-ggttcgaa-tccgaccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||||||||| ||||||||  ||| ||||||||||| ||||||    
T  19564125 tcacacaattaaatgtggagaagtggggtgtccgaggttcgaaccccggccctgcataaattatgca 19564191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 339 - 409
Target Start/End: Original strand, 35284167 - 35284237
Alignment:
Q  339 ccatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacc 409  Q
    |||||||||||||| |||| ||| | ||||||||| | |||||  ||||||||||||||||||||||||||    
T  35284167 ccatagttttaaaaatcggatcggtcatcgactcggtaaggttagtggatcactgagtcattggtcgaacc 35284237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 23991235 - 23991303
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||  | ||||||||||| ||||||    
T  23991235 ctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccggcccctgcataaattatgca 23991303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 47469044 - 47469112
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaa--tccgaccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||||||||| |||||||||  || | ||||||||||| ||||||    
T  47469044 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcagcccctgcataaattatgca 47469112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 7491860 - 7491824
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||||||||||    
T  7491860 ctcacacaattaaatgtggagaagtggggtgtccggg 7491824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 11333763 - 11333727
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||||||||||    
T  11333763 ctcacacaattaaatgtggagaagtggggtgtccggg 11333727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 11491784 - 11491748
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||||||||||    
T  11491784 ctcacacaattaaatgtggagaagtggggtgtccggg 11491748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 11860141 - 11860105
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||||||||||    
T  11860141 ctcacacaattaaatgtggagaagtggggtgtccggg 11860105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 332
Target Start/End: Original strand, 16997230 - 16997301
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaa--tccgaccctgcataaaatatgcattg 332  Q
    ||||||||||| |||||||||||||| ||||||| |||||||||  || | |||||||||||||||||||||    
T  16997230 ctcacacaattgaatgtggagaagtgaggtgtccggggttcgaacctcggcccctgcataaaatatgcattg 16997301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Original strand, 45416150 - 45416217
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtccggg-ttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||||||||||| |||||| ||  | ||||||||||| ||||||    
T  45416150 tcacacaattaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgca 45416217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 7000933 - 7000968
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccgg 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  7000933 ctcacacaattaaatgtggagaagtggggtgtccgg 7000968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 28281976 - 28282046
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacca 410  Q
    ||||||||||||||||||  || | || |||||| ||||||| |||| |||||||||||||||| ||||||    
T  28281976 catagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaacca 28282046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 409
Target Start/End: Original strand, 9293642 - 9293711
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacc 409  Q
    |||||||||||||||||||||||| |||||||||| | || | |||| ||| || |||| ||||||||||    
T  9293642 catagttttaaaactcggctcgatcatcgactcgacgggggtactgggtcaatgggtcaatggtcgaacc 9293711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 25036233 - 25036301
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtg-tccgggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||||  | ||||||||||| ||||||    
T  25036233 ctcacacaattaaatgtggagaaatggggtgttcggggttcgaatcccggcccctgcataaattatgca 25036301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 25041445 - 25041513
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtg-tccgggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||||||||||||| ||||||| || ||||||||||||  | ||||||||||| ||||||    
T  25041445 ctcacacaattaaatgtggagaaatggggtgttcggggttcgaatcccggcccctgcataaattatgca 25041513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 31124609 - 31124677
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccgg-gttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||||| ||||| ||||||| ||  | ||||||||||| ||||||    
T  31124609 ctcacacaattaaatgtggagaagtggggtatccggagttcgaaccccggcccctgcataaattatgca 31124677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 36666547 - 36666615
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||| |||||||||||||||||||| ||||||||| ||  | ||||||||||| ||||||    
T  36666547 ctcacacaattaattgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgca 36666615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 309
Target Start/End: Complemental strand, 37280800 - 37280755
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccgggttcgaatcc 309  Q
    ||||||||||||||||||||||||||||||| | | ||||||||||    
T  37280800 ctcacacaattaaatgtggagaagtggggtgccggagttcgaatcc 37280755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 17058803 - 17058767
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||| |||||||||||||||||||||||    
T  17058803 ctcacacaattaattgtggagaagtggggtgtccggg 17058767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 24499824 - 24499788
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||||||||||||| |||||||||||    
T  24499824 ctcacacaattaaatgtggagaagtagggtgtccggg 24499788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 34562758 - 34562794
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||| |||||||||||||||||||||    
T  34562758 ctcacacaattaaatatggagaagtggggtgtccggg 34562794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 414
Target Start/End: Original strand, 42866276 - 42866352
Alignment:
Q  338 accatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||||| | |||||||||  | || | |||| ||| || |||| |||||||||||||||    
T  42866276 accatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactga 42866352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 51942394 - 51942326
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtcc-gggttcgaa-tccgaccctgcataaaatatgca 329  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||  ||||||||| ||| ||||||||    
T  51942394 ctcacacaattaaattgtggagaagtggggtgtccggggttcgaaccccgaccctgtatataatatgca 51942326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 24875070 - 24875027
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg-ggttcgaa 306  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  24875070 ctcacacaattaaatatggagaagtggggtgtccgaggttcgaa 24875027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 26909841 - 26909884
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaa 306  Q
    |||||||| ||||||||||||||||||||||||| |||||||||    
T  26909841 ctcacacatttaaatgtggagaagtggggtgtccagggttcgaa 26909884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 44257770 - 44257841
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccac 411  Q
    |||||||||||||||||||||| | |||||||||  | || | |||| ||| ||||||| ||||||||||||    
T  44257770 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccac 44257841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 8865955 - 8865885
Alignment:
Q  263 actcacacaattaaat-gtggagaagtggggtgtcc-gggttcgaat-ccga-ccctgcataaaatatgca 329  Q
    |||||||||||||||| |||||||||||| |||||| |||||||||| |||| ||||||||| ||||||||    
T  8865955 actcacacaattaaattgtggagaagtggagtgtccagggttcgaatcccgacccctgcatataatatgca 8865885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 414
Target Start/End: Original strand, 20725983 - 20726057
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||| | ||||||||||   || | |||| ||| ||||| | |||||||||||||||    
T  20725983 catagttttaaaactcggctcggtcatcgactcgacatggatactgggtcaatgagttaatggtcgaaccactga 20726057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 1846998 - 1846965
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcg 373  Q
    |||||||||||||||||||||||| |||||||||    
T  1846998 catagttttaaaactcggctcgatcatcgactcg 1846965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 414
Target Start/End: Original strand, 3252224 - 3252300
Alignment:
Q  338 accatagttttaaaactcggctcgatgatcgactcgat-gaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||||| | ||||||||| | |||| | |||| ||||||||| | |||| ||||||||||    
T  3252224 accatagttttaaaactcggctcggtcatcgactcggtagagg-tactgggtcactgagttaatggttgaaccactga 3252300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 3742287 - 3742324
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||  |||||||||||||||||||||||||||    
T  3742287 actcacacatgtaaatgtggagaagtggggtgtccggg 3742324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 375
Target Start/End: Complemental strand, 16914595 - 16914558
Alignment:
Q  338 accatagttttaaaactcggctcgatgatcgactcgat 375  Q
    |||||||||||||||||||||||||  |||||||||||    
T  16914595 accatagttttaaaactcggctcgaccatcgactcgat 16914558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 18607780 - 18607848
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtg-tccgggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||||||| ||||||||||||| || ||||||||| ||  | ||||||||||| ||||||    
T  18607780 ctcacacaattaaatgtagagaagtggggtgttcggggttcgaaccccagcccctgcataaattatgca 18607848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 19063303 - 19063340
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtccggg 300  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  19063303 ctcacacaattaaattgtggagaagtggggtgtccggg 19063340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 37034981 - 37034948
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcg 373  Q
    |||||||||||||||||||||||| |||||||||    
T  37034981 catagttttaaaactcggctcgatcatcgactcg 37034948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 308
Target Start/End: Complemental strand, 41927075 - 41927030
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg-ttcgaatc 308  Q
    |||||||||||||||||||||||||  |||||||||| ||||||||    
T  41927075 ctcacacaattaaatgtggagaagtaaggtgtccgggattcgaatc 41927030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 300
Target Start/End: Complemental strand, 44546153 - 44546120
Alignment:
Q  267 acacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||| |||||||||||||||||||||||    
T  44546153 acacaattaattgtggagaagtggggtgtccggg 44546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 12374484 - 12374552
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtccgggttcgaa-tccgaccc-tgcataaaatatgca 329  Q
    ||||||||||| ||| ||| ||||||||||||||||||||||||  ||||||| |||||| ||||||||    
T  12374484 ctcacacaatttaattgtgaagaagtggggtgtccgggttcgaaccccgacccttgcatataatatgca 12374552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 309
Target Start/End: Complemental strand, 15390321 - 15390273
Alignment:
Q  263 actcacacaattaaat-gtggagaagtggggtgtcc-gggttcgaatcc 309  Q
    |||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  15390321 actcacacaattaaattgtggagaagtggagtgtccagggttcgaatcc 15390273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 39670800 - 39670832
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtc 296  Q
    |||||||||||||||||||||||||||| ||||    
T  39670800 ctcacacaattaaatgtggagaagtgggatgtc 39670832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 305
Target Start/End: Complemental strand, 44245443 - 44245411
Alignment:
Q  273 ttaaatgtggagaagtggggtgtccgggttcga 305  Q
    |||||||||||||||||||||||| ||||||||    
T  44245443 ttaaatgtggagaagtggggtgtcagggttcga 44245411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Original strand, 45774757 - 45774793
Alignment:
Q  337 aaccatagttttaaaactcggctcgatgatcgactcg 373  Q
    ||||||||||||||||||||| ||||| |||||||||    
T  45774757 aaccatagttttaaaactcggttcgatcatcgactcg 45774793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 7e-16; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 264 - 331
Target Start/End: Complemental strand, 25155640 - 25155570
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgcatt 331  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||   |||||||||||||||||||||    
T  25155640 ctcacacaattaaatgtggagaagtggggtgtccagggttcgaaccccgaaccctgcataaaatatgcatt 25155570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 264 - 309
Target Start/End: Original strand, 40518860 - 40518906
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccgg-gttcgaatcc 309  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||    
T  40518860 ctcacacaattaaatgtggagaagtggggtgtccggagttcgaatcc 40518906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 36932072 - 36932004
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||||||| |||||||||||||||| ||||||||| ||  ||||||||||||| ||||||    
T  36932072 ctcacacaattaaatgtagagaagtggggtgtccggggttcgaaccccggaccctgcataaattatgca 36932004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 299
Target Start/End: Original strand, 41331050 - 41331085
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccgg 299  Q
    ||||||||||||||||||||||||||||||||||||    
T  41331050 ctcacacaattaaatgtggagaagtggggtgtccgg 41331085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 306
Target Start/End: Complemental strand, 4886936 - 4886895
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtccgggttcgaa 306  Q
    ||||||||||| ||||||||||||||||||||||| ||||||    
T  4886936 tcacacaattatatgtggagaagtggggtgtccggattcgaa 4886895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 7778966 - 7779003
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||| |||||||||    
T  7778966 actcacacaattaaatgtggagaagtggagtgtccggg 7779003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 14819118 - 14819150
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgt 295  Q
    |||||||||||||||||||||||||||||||||    
T  14819118 actcacacaattaaatgtggagaagtggggtgt 14819150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 15266116 - 15266148
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgt 295  Q
    |||||||||||||||||||||||||||||||||    
T  15266116 actcacacaattaaatgtggagaagtggggtgt 15266148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 15272901 - 15272933
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgt 295  Q
    |||||||||||||||||||||||||||||||||    
T  15272901 actcacacaattaaatgtggagaagtggggtgt 15272933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 22774139 - 22774103
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||| ||||||||||||||||||||||||||||    
T  22774139 ctcacacatttaaatgtggagaagtggggtgtccggg 22774103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 414
Target Start/End: Original strand, 36858131 - 36858207
Alignment:
Q  338 accatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||||| | |||||||||  | || | |||| ||| || |||| |||||||||||||||    
T  36858131 accatagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactga 36858207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 45284790 - 45284826
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||||| |||||||||||||||||||    
T  45284790 ctcacacaattaaatgttgagaagtggggtgtccggg 45284826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 49089599 - 49089563
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||| ||||||||||||||||||||||||    
T  49089599 ctcacacaattatatgtggagaagtggggtgtccggg 49089563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 9822518 - 9822589
Alignment:
Q  339 ccatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacca 410  Q
    ||||||||||||||||||||||||| ||||| |||  | || |  ||| ||||||||||| |||||||||||    
T  9822518 ccatagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaacca 9822589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 410
Target Start/End: Original strand, 10724443 - 10724514
Alignment:
Q  339 ccatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacca 410  Q
    ||||||||||||||||||||||||| ||||| |||  | || |  ||| ||||||||||| |||||||||||    
T  10724443 ccatagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaacca 10724514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 328
Target Start/End: Original strand, 31727762 - 31727829
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtccg-ggttcgaa-tccgaccctgcataaaatatgc 328  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||| ||||||| |||||| |||||||    
T  31727762 ctcacacaattaaattgtggagaagtggagtgtccgtggttcgaactccgaccttgcatataatatgc 31727829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 295
Target Start/End: Complemental strand, 38151443 - 38151412
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgt 295  Q
    ||||||||||||||||||||||||||||||||    
T  38151443 ctcacacaattaaatgtggagaagtggggtgt 38151412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 41465932 - 41465865
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtccgg-gttcgaatcc-ga-ccctgcataaaatatgca 329  Q
    |||||| |||||||||||||||||||||||||||| ||||||| || || ||||||||| ||||||||    
T  41465932 tcacaccattaaatgtggagaagtggggtgtccggagttcgaaccctgacccctgcatataatatgca 41465865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 414
Target Start/End: Complemental strand, 11734345 - 11734271
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||| | |||||||||  | || | |||| ||| || |||| |||||||||||||||    
T  11734345 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactga 11734271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 410
Target Start/End: Original strand, 16560919 - 16560989
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacca 410  Q
    |||||||||||||||||   || | || |||||| ||||||| |||| |||||||||||||||| ||||||    
T  16560919 catagttttaaaactcgaaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaacca 16560989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 16604743 - 16604673
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacca 410  Q
    |||||||||||||||||   || | || |||||| ||||||| |||| |||||||||||||||| ||||||    
T  16604743 catagttttaaaactcgaaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaacca 16604673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 414
Target Start/End: Original strand, 29983235 - 29983309
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||| ||| | ||||||||| || || | |||| ||| || |||| |||||||||||||||    
T  29983235 catagttttaaaactcggttcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactga 29983309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 1398874 - 1398942
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg-ttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||  ||||||||||||||||||||||||||| |||||| ||  | ||||||||| ||||||||    
T  1398874 ctcacacatataaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcatataatatgca 1398942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 27424938 - 27424870
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg-ggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||||||||||||||||| || |||| |||||||| ||  | ||||||||| ||||||||    
T  27424938 ctcacacaattaaatgtggagaagtggagtatccgaggttcgaaccccggcccctgcatataatatgca 27424870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 306
Target Start/End: Complemental strand, 41853729 - 41853696
Alignment:
Q  273 ttaaatgtggagaagtggggtgtccgggttcgaa 306  Q
    ||||||| ||||||||||||||||||||||||||    
T  41853729 ttaaatgcggagaagtggggtgtccgggttcgaa 41853696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 296
Target Start/End: Original strand, 44831592 - 44831625
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtc 296  Q
    ||||||| ||||||||||||||||||||||||||    
T  44831592 actcacataattaaatgtggagaagtggggtgtc 44831625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 292
Target Start/End: Complemental strand, 12935839 - 12935811
Alignment:
Q  264 ctcacacaattaaatgtggagaagtgggg 292  Q
    |||||||||||||||||||||||||||||    
T  12935839 ctcacacaattaaatgtggagaagtgggg 12935811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 22548310 - 22548274
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  22548310 ctcacgcaattaaatgtggagaagtggggtgttcggg 22548274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 369
Target Start/End: Original strand, 30801674 - 30801706
Alignment:
Q  337 aaccatagttttaaaactcggctcgatgatcga 369  Q
    ||||||||||||||||||||||||||| |||||    
T  30801674 aaccatagttttaaaactcggctcgatcatcga 30801706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 372
Target Start/End: Complemental strand, 34192006 - 34191974
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactc 372  Q
    |||||||||||||||||||||| ||||||||||    
T  34192006 catagttttaaaactcggctcggtgatcgactc 34191974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 41854096 - 41854060
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||| ||||||||||||||||| ||||||||||||    
T  41854096 ctcacataattaaatgtggagaagcggggtgtccggg 41854060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 43779852 - 43779816
Alignment:
Q  337 aaccatagttttaaaactcggctcgatgatcgactcg 373  Q
    ||||||||||||||||||||| ||| |||||||||||    
T  43779852 aaccatagttttaaaactcggatcggtgatcgactcg 43779816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 47194394 - 47194426
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgt 295  Q
    |||||||||||||| ||||||||||||||||||    
T  47194394 actcacacaattaattgtggagaagtggggtgt 47194426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 47438033 - 47437997
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||| |||||||||||||||||| |||||||||    
T  47438033 ctcacacagttaaatgtggagaagtggagtgtccggg 47437997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 44764819 - 44764753
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatccgaccctgcataaaatatgca 329  Q
    ||||||||||||||||||||||||||| |||||| ||||||||| ||| ||||||||||| ||||||    
T  44764819 ctcacacaattaaatgtggagaagtggagtgtccggggttcgaacccgcccctgcataaattatgca 44764753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 19222557 - 19222625
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||  | ||||||||||| ||||||    
T  19222557 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgca 19222625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 24303489 - 24303421
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||  | ||||||||||| ||||||    
T  24303489 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgca 24303421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 32401589 - 32401529
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatccga-ccctgcataaa 322  Q
    |||||||||||||||||||||| ||||||||||| ||||||||| |||| |||||||||||    
T  32401589 ctcacacaattaaatgtggagatgtggggtgtccggggttcgaacccgacccctgcataaa 32401529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 54769801 - 54769869
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg-ggttcgaa-tccgac-cctgcataaaatatgca 329  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||| | |||||||| ||||||||    
T  54769801 ctcacacaattaaatgtggagaagtggggtgtccgtggttcgaactccggcacctgcatataatatgca 54769869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 414
Target Start/End: Original strand, 15100604 - 15100678
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||||| ||||||||||| ||| |  ||| ||| || || | |||||||||||||||    
T  15100604 catagttttaaaactcggctcgatcatcgactcgataaggatattgggtcattgggttaatggtcgaaccactga 15100678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 43280168 - 43280099
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg-ttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| ||  | ||||||||||| ||||||    
T  43280168 actcacacatttaaatgtggagaagtggggtgtccgggattcgaaccccggcccctgcataaattatgca 43280099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 414
Target Start/End: Complemental strand, 55258187 - 55258113
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||| | ||||||||| || || | |||| ||| || |||| |||||||||||||||    
T  55258187 catagttttaaaactcggctcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactga 55258113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 5173981 - 5174049
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtg-tccgggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||||||||||||||||||||| || ||||||||| ||  | ||||||||||| ||||||    
T  5173981 ctcacacaattaaatgtggagaagtggggtgttcggggttcgaacccctgcccctgcataaattatgca 5174049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 341 - 414
Target Start/End: Complemental strand, 11412594 - 11412521
Alignment:
Q  341 atagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    ||||||||||||||||||||| | |||||||||   ||| |  ||| |||||| ||||||||||||||||||||    
T  11412594 atagttttaaaactcggctcggtcatcgactcggcaagggtattgggtcactgggtcattggtcgaaccactga 11412521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 40192256 - 40192219
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||| |||||||||    
T  40192256 actcacacaattaaatgtggagaagtggagtgtccggg 40192219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 41411597 - 41411634
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  41411597 actcacacaattaaatgtggagaagcggggtgtccggg 41411634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 49284921 - 49284853
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaa--tccgaccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||||| ||| |||||||||   ||| ||||||||||| ||||||    
T  49284921 ctcacacaattaaatgtggagaagtggggtttccagggttcgaactcccgtccctgcataaattatgca 49284853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 7253491 - 7253527
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||| ||||||||||||||||||||    
T  7253491 ctcacacaattaaatgcggagaagtggggtgtccggg 7253527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 46844942 - 46845010
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaa-tccga-ccctgcataaaatatgca 329  Q
    |||||||| |||||||||||||||| |||||||| ||||||||| ||||| ||||||||||| ||||||    
T  46844942 ctcacacatttaaatgtggagaagtagggtgtccggggttcgaactccgacccctgcataaattatgca 46845010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 49443394 - 49443430
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||| ||||||||||||||||||||||||||||    
T  49443394 ctcacacatttaaatgtggagaagtggggtgtccggg 49443430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 52992030 - 52992098
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtc-cgggttcgaat-ccgaccc-tgcataaaatatgca 329  Q
    ||||||||||||||| |||||||||||||||||  |||||||||| ||||||| |||||||| ||||||    
T  52992030 ctcacacaattaaatatggagaagtggggtgtcgagggttcgaatcccgacccttgcataaattatgca 52992098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 16906818 - 16906853
Alignment:
Q  273 ttaaatgtggagaagtggggtgtccgggttcgaatc 308  Q
    |||| |||||||||||||||||||||||||||||||    
T  16906818 ttaattgtggagaagtggggtgtccgggttcgaatc 16906853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 30779536 - 30779606
Alignment:
Q  263 actcacacaattaaat-gtggagaagtggggtgtcc-gggttcgaa-tccga-ccctgcataaaatatgca 329  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||  |||| ||||||||| ||||||||    
T  30779536 actcacacaattaaattgtggagaagtggggtgtccagggttcgaaccccgacccctgcatataatatgca 30779606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 414
Target Start/End: Complemental strand, 42217264 - 42217190
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||| | ||||||||| | | | | |||| ||| ||||| | |||||||||||||||    
T  42217264 catagttttaaaactcggctcggtcatcgactcggtaaaggtactgggtcattgagttaatggtcgaaccactga 42217190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 31587047 - 31586978
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtccggg-ttcgaa-tccga-ccctgcataaaatatgca 329  Q
    ||||||||||| ||| |||||||||||||||||||||| |||||| ||||| ||||||||| ||||||||    
T  31587047 ctcacacaatttaattgtggagaagtggggtgtccgggattcgaactccgacccctgcatataatatgca 31586978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 38949773 - 38949705
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtg-tccgggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||| ||||||||||||||||||||||| || ||||||||| ||  | ||||||||||| ||||||    
T  38949773 ctcacactattaaatgtggagaagtggggtgttcggggttcgaaccccggcccctgcataaattatgca 38949705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 4227715 - 4227783
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccgg-gttcgaa-tccga-ccctgcataaaatatgca 329  Q
    ||||||||||||| | |||||||||||||||||||| |||||||  |||| ||||||||||| ||||||    
T  4227715 ctcacacaattaattatggagaagtggggtgtccggagttcgaaccccgacccctgcataaattatgca 4227783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 410
Target Start/End: Complemental strand, 6102021 - 6101953
Alignment:
Q  342 tagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacca 410  Q
    ||||||||| ||||||  |  ||||||||||| ||||| | |||| ||| |||||||||||||||||||    
T  6102021 tagttttaagactcggaccagtgatcgactcggtgagggtactgggtcaatgagtcattggtcgaacca 6101953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 299
Target Start/End: Complemental strand, 11995231 - 11995195
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccgg 299  Q
    |||||||||||||||||||||||| || |||||||||    
T  11995231 actcacacaattaaatgtggagaaatgaggtgtccgg 11995195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 26880276 - 26880244
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtc 296  Q
    |||||||| ||||||||||||||||||||||||    
T  26880276 ctcacacatttaaatgtggagaagtggggtgtc 26880244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 314
Target Start/End: Original strand, 33606910 - 33606962
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtcc-gggttcgaatccgaccc 314  Q
    ||||||||||||||| |||||||||||| |||||| ||||||||| |||||||    
T  33606910 ctcacacaattaaattgtggagaagtggagtgtccggggttcgaacccgaccc 33606962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 312
Target Start/End: Original strand, 42359878 - 42359918
Alignment:
Q  273 ttaaatgtggagaagtggggtgtccg-ggttcgaatccgac 312  Q
    ||||||||||||||||||||||||||  |||||||||||||    
T  42359878 ttaaatgtggagaagtggggtgtccgatgttcgaatccgac 42359918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 295
Target Start/End: Original strand, 44685138 - 44685170
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgt 295  Q
    |||||||||||||| ||||||||||||||||||    
T  44685138 actcacacaattaattgtggagaagtggggtgt 44685170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 46817322 - 46817358
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  46817322 ctcacacatttaaatgtggagaagtggggtgttcggg 46817358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 49577468 - 49577436
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtc 296  Q
    ||||||||||||||| |||||||||||||||||    
T  49577468 ctcacacaattaaatatggagaagtggggtgtc 49577436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 296
Target Start/End: Original strand, 52309085 - 52309113
Alignment:
Q  268 cacaattaaatgtggagaagtggggtgtc 296  Q
    |||||||||||||||||||||||||||||    
T  52309085 cacaattaaatgtggagaagtggggtgtc 52309113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 53203923 - 53203891
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtc 296  Q
    ||||||||||||||||||||||||| |||||||    
T  53203923 ctcacacaattaaatgtggagaagttgggtgtc 53203891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 340 - 409
Target Start/End: Complemental strand, 29600 - 29531
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacc 409  Q
    |||||||||||||||| ||||| ||||||| ||| ||||||| |||| ||||||||||||||||| ||||    
T  29600 catagttttaaaactcagctcggtgatcgattcggtgaggttactgggtcactgagtcattggtcaaacc 29531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 6419054 - 6419121
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccgggttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||| ||||||||||||||||||||||| |||||||||||||| ||  ||||||||||| ||||||||    
T  6419054 ctcatacaattaaatgtggagaagtgggttgtccgggttcgaaccccggaccctgcatataatatgca 6419121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 29646519 - 29646555
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||||||||||    
T  29646519 ctcacacaattaaatgtggagaagtggggtgtccggg 29646555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 338 - 414
Target Start/End: Original strand, 6817288 - 6817364
Alignment:
Q  338 accatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||||| | ||||||||| | ||| | |||| ||| || || | |||||||||||||||    
T  6817288 accatagttttaaaactcggctcggtcatcgactcggtaagggtactgggtcattgggttaatggtcgaaccactga 6817364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 8443638 - 8443602
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||| ||||||||||||||||||||||||||||||    
T  8443638 ctcacagaattaaatgtggagaagtggggtgtccggg 8443602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 8452442 - 8452406
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||| ||||||||||||||||||||||||||||||    
T  8452442 ctcacagaattaaatgtggagaagtggggtgtccggg 8452406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 15963912 - 15963982
Alignment:
Q  263 actcacacaattaaat-gtggagaagtggggtgtcc-gggttcgaatccga--ccctgcataaaatatgca 329  Q
    |||||||||||||||| |||||||||||| |||||| ||||||||| || |  ||||||||||||||||||    
T  15963912 actcacacaattaaattgtggagaagtggagtgtccagggttcgaaccccagcccctgcataaaatatgca 15963982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 17534947 - 17534878
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccgg-gttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||||||||||||||||  ||||||||| ||||||| ||  | ||||||||||| ||||||    
T  17534947 actcacacaattaaatgtggagaagtcaggtgtccggagttcgaaccccggcccctgcataaattatgca 17534878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 414
Target Start/End: Original strand, 30269593 - 30269667
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||| | |||||||||  | || | |||| ||| ||||| | |||||||||||||||    
T  30269593 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagttaatggtcgaaccactga 30269667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 607086 - 607018
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccgg-gttcgaa--tccgaccctgcataaaatatgca 329  Q
    ||||||||||||| |||||||||||||||||| ||| |||||||  || | ||||||||||| ||||||    
T  607086 ctcacacaattaattgtggagaagtggggtgttcggagttcgaacctcggtccctgcataaattatgca 607018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Original strand, 23595691 - 23595724
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcg 373  Q
    |||||||||||||||||||||| |||||||||||    
T  23595691 catagttttaaaactcggctcggtgatcgactcg 23595724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 24319112 - 24319044
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||| ||||||||||||| |||||| ||||||||| ||  | ||||||||||| ||||||    
T  24319112 ctcacacaattaattgtggagaagtggagtgtccggggttcgaaccccggcccctgcataaattatgca 24319044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 31952369 - 31952332
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||| |||||||| |||||||||||||||||||||||    
T  31952369 actcatacaattaattgtggagaagtggggtgtccggg 31952332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 1435908 - 1435872
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||  ||||||||    
T  1435908 ctcacacaattaaatgtggagaagtggaatgtccggg 1435872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 22351350 - 22351314
Alignment:
Q  337 aaccatagttttaaaactcggctcgatgatcgactcg 373  Q
    ||||||||||||||||||||||||| | |||||||||    
T  22351350 aaccatagttttaaaactcggctcggtcatcgactcg 22351314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 274 - 306
Target Start/End: Complemental strand, 28021321 - 28021289
Alignment:
Q  274 taaatgtggagaagtggggtgtccgggttcgaa 306  Q
    ||||||||||||||||||||||| |||||||||    
T  28021321 taaatgtggagaagtggggtgtcagggttcgaa 28021289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 31104981 - 31104945
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||| || |||||||||||||||||||||||||    
T  31104981 ctcacacattttaatgtggagaagtggggtgtccggg 31104945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 34574125 - 34574161
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||| ||||||||||||||||||||||| ||||    
T  34574125 ctcacacatttaaatgtggagaagtggggtgttcggg 34574161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 4068081 - 4068010
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaa--tccgaccctgcataaaatatgcattg 332  Q
    |||||||||||||||||||||||||||||||||| |||||||||  ||   |||||||||||||||||||||    
T  4068081 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaacctcgccccctgcataaaatatgcattg 4068010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 338 - 413
Target Start/End: Complemental strand, 814878 - 814803
Alignment:
Q  338 accatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactg 413  Q
    |||||||||||||||||| | ||| ||||||||||| | ||| | ||||||||||| |||| ||||||||||||||    
T  814878 accatagttttaaaactcagatcggtgatcgactcggtaaggatactggatcactgggtcaatggtcgaaccactg 814803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 831689 - 831652
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||||||||||||||||||||||||||    
T  831689 actcacacaattaaatgtggagaagtggggtgtccggg 831652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 17064828 - 17064865
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17064828 actcacacaattaaatgtggagaagtggggtgtccggg 17064865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 39234710 - 39234778
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaat-ccga-ccctgcataaaatatgca 329  Q
    |||||||| ||||| ||||||||||||||||||| |||||||||| |||| ||||||||||||||||||    
T  39234710 ctcacacatttaaacgtggagaagtggggtgtccggggttcgaatcccgacccctgcataaaatatgca 39234778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 265 - 300
Target Start/End: Original strand, 14804954 - 14804989
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||||||||||||||||||||||||    
T  14804954 tcacacaattaaatgtggagaagtggggtgtccggg 14804989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 20145535 - 20145578
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg-ggttcgaa 306  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  20145535 ctcacacaattaaatgtggagaagtggggtgtccgaggttcgaa 20145578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 24477924 - 24477881
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg-ggttcgaa 306  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  24477924 ctcacacaattaaatgtggagaagtggggtgtccgaggttcgaa 24477881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 414
Target Start/End: Original strand, 17421303 - 17421377
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||| | ||||||||||   || |  ||||||| |||||||||| ||||||||||||    
T  17421303 catagttttaaaactcggctcggtcatcgactcgagaggggtattggatcattgagtcattgatcgaaccactga 17421377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 337 - 413
Target Start/End: Original strand, 18942246 - 18942322
Alignment:
Q  337 aaccatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactg 413  Q
    ||||||||||||||||||||||||| | ||||||||| |  || | | || |||||| |||| ||||||||||||||    
T  18942246 aaccatagttttaaaactcggctcggtcatcgactcggtaggggtaccgggtcactgggtcaatggtcgaaccactg 18942322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 273 - 329
Target Start/End: Original strand, 7545378 - 7545437
Alignment:
Q  273 ttaaatgtggagaagtggggtgtccggg-ttcgaatcc-ga-ccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||| ||||||||| || ||||||||| ||||||||    
T  7545378 ttaaatgtggagaagtggggtgtccgggattcgaatcctgacccctgcatataatatgca 7545437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 11541788 - 11541745
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaa 306  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    
T  11541788 ctcacacaattaaatgtggagaagtgaggtgtccagggttcgaa 11541745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 33018497 - 33018564
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg-ggttcgaa-tccgaccctgcataaaatatgca 329  Q
    ||||||||  |||||||||||||||||||||||||  |||||||  ||||||||||||||| ||||||    
T  33018497 ctcacacatataaatgtggagaagtggggtgtccgaagttcgaaccccgaccctgcataaattatgca 33018564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 306
Target Start/End: Original strand, 23292389 - 23292431
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtccg-ggttcgaa 306  Q
    |||||||||||| ||||||||||||||||||||| ||||||||    
T  23292389 tcacacaattaattgtggagaagtggggtgtccgaggttcgaa 23292431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 308
Target Start/End: Original strand, 40276412 - 40276458
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatc 308  Q
    |||||||||||||| ||||||||||||||| |||| |||||||||||    
T  40276412 actcacacaattaattgtggagaagtggggcgtccggggttcgaatc 40276458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 296
Target Start/End: Complemental strand, 34208474 - 34208441
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtc 296  Q
    |||||||||||||| |||||||||||||||||||    
T  34208474 actcacacaattaattgtggagaagtggggtgtc 34208441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 35241496 - 35241427
Alignment:
Q  263 actcacacaattaaat-gtggagaagtggggtgtccgggttcgaa-tccga-ccctgcataaaatatgca 329  Q
    |||||||||||||||| |||||||||||| ||||| |||||||||  |||| ||||||||| ||||||||    
T  35241496 actcacacaattaaattgtggagaagtggagtgtcagggttcgaaccccgacccctgcatataatatgca 35241427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 3198426 - 3198390
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||| |||||||||||||||||| |||||||||||    
T  3198426 ctcacataattaaatgtggagaagtagggtgtccggg 3198390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 292
Target Start/End: Original strand, 4238278 - 4238306
Alignment:
Q  264 ctcacacaattaaatgtggagaagtgggg 292  Q
    |||||||||||||||||||||||||||||    
T  4238278 ctcacacaattaaatgtggagaagtgggg 4238306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 7171827 - 7171795
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtc 296  Q
    ||||||||||||| |||||||||||||||||||    
T  7171827 ctcacacaattaattgtggagaagtggggtgtc 7171795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 8571892 - 8571856
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||||||||||||| |||||| ||||    
T  8571892 ctcacacaattaaatgtggagaagtagggtgttcggg 8571856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 10364400 - 10364364
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||| |||||||||||||||||| |||||||||    
T  10364400 ctcacacatttaaatgtggagaagtggagtgtccggg 10364364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 12891656 - 12891620
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||  |||||||||||||||||||||||||||    
T  12891656 ctcacacatataaatgtggagaagtggggtgtccggg 12891620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 297
Target Start/End: Complemental strand, 15210888 - 15210856
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtcc 297  Q
    ||||||| |||||||||||||||||||||||||    
T  15210888 tcacacatttaaatgtggagaagtggggtgtcc 15210856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 21749348 - 21749416
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtccgggttcgaa-tccgac-cctgcataaaatatgca 329  Q
    ||||||||||| ||| |||||||||||| |||||||||||||||  ||||| |||||||| ||||||||    
T  21749348 ctcacacaatttaattgtggagaagtggagtgtccgggttcgaacaccgactcctgcatataatatgca 21749416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 292
Target Start/End: Original strand, 29646084 - 29646112
Alignment:
Q  264 ctcacacaattaaatgtggagaagtgggg 292  Q
    |||||||||||||||||||||||||||||    
T  29646084 ctcacacaattaaatgtggagaagtgggg 29646112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 32550275 - 32550239
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  32550275 ctcacacaattaaatgtggagtagtggggtgtacggg 32550239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 36270840 - 36270772
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtg-tccgggttcgaatc-cgaccc-tgcataaaatatgca 329  Q
    |||||||| ||||||||||||||||||| || || ||||||||| | |||||| |||||||||||||||    
T  36270840 ctcacacacttaaatgtggagaagtgggatgttcggggttcgaacctcgacccttgcataaaatatgca 36270772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 37553896 - 37553928
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtc 296  Q
    |||||||||||||||||||| ||||||||||||    
T  37553896 ctcacacaattaaatgtggataagtggggtgtc 37553928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 37684517 - 37684549
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtc 296  Q
    |||||||||||||||||||| ||||||||||||    
T  37684517 ctcacacaattaaatgtggataagtggggtgtc 37684549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 271 - 329
Target Start/End: Original strand, 41083516 - 41083576
Alignment:
Q  271 aattaaatgtggagaagtggggtgtccgggttcgaa-tccga-ccctgcataaaatatgca 329  Q
    ||||||| ||||||||||||||||||||| ||||||  |||| ||||||||||| ||||||    
T  41083516 aattaaacgtggagaagtggggtgtccggattcgaaccccgacccctgcataaattatgca 41083576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 264 - 332
Target Start/End: Complemental strand, 55056015 - 55055944
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaa--tccgaccctgcataaaatatgcattg 332  Q
    ||||||||||||||||||||||||||| |||||| |||||||||  || | |||||||||||||||||||||    
T  55056015 ctcacacaattaaatgtggagaagtggcgtgtccggggttcgaacctcggcccctgcataaaatatgcattg 55055944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 12625927 - 12625860
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtccgg-gttcgaa-tccga-ccctgcataaaatatgca 329  Q
    ||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||| ||||||    
T  12625927 tcacacaattaaatgtggagaagtggggtgtccggtgttcgaactccgacccctgcataaattatgca 12625860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 51890896 - 51890828
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||  | ||||||||||| ||||||    
T  51890896 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgca 51890828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 49264625 - 49264589
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||||||||||    
T  49264625 ctcacacaattaaatgtggagaagtggggtgtccggg 49264589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 297
Target Start/End: Complemental strand, 42664080 - 42664047
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc 297  Q
    ||||||||||||||||||||||||||||||||||    
T  42664080 ctcacacaattaaatgtggagaagtggggtgtcc 42664047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 2629678 - 2629642
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||||| ||||    
T  2629678 ctcacacaattaaatgtggagaagtggggtgttcggg 2629642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 339 - 415
Target Start/End: Original strand, 11792383 - 11792459
Alignment:
Q  339 ccatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactgaa 415  Q
    ||||||||||||||||||||||| | |||||||||  | || | |||| ||| || |||| ||||||||||||||||    
T  11792383 ccatagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactgaa 11792459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 268 - 300
Target Start/End: Complemental strand, 23695179 - 23695147
Alignment:
Q  268 cacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||||||    
T  23695179 cacaattaaatgtggagaagtggggtgtccggg 23695147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 29406456 - 29406388
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccgg-gttcgaa-tccga-ccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||| ||||||| |||||||  |||| ||||||||||| ||||||    
T  29406456 ctcacacaattaaatgtggagaagtgggttgtccggagttcgaaccccgacccctgcataaattatgca 29406388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 31852448 - 31852412
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||| |||||||||||||||||||||    
T  31852448 ctcacacaattaaatatggagaagtggggtgtccggg 31852412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 38848091 - 38848127
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||| ||||||||||||||||||||||||||||    
T  38848091 ctcacacatttaaatgtggagaagtggggtgtccggg 38848127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 296
Target Start/End: Complemental strand, 42002405 - 42002373
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtc 296  Q
    |||||||||||||||||||||||||||||||||    
T  42002405 ctcacacaattaaatgtggagaagtggggtgtc 42002373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 43905809 - 43905773
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||| ||||||||||||||||||||||    
T  43905809 ctcacacaattaaacgtggagaagtggggtgtccggg 43905773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 53921478 - 53921514
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||| ||||||||||||||||||||||||||||    
T  53921478 ctcacacagttaaatgtggagaagtggggtgtccggg 53921514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 3785010 - 3784943
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtg-tccgggttcgaatcc-gaccctgcataaaatatgca 329  Q
    |||||||| ||||||||||||||||| |||| || ||||||||| || ||||||||||||| ||||||    
T  3785010 ctcacacatttaaatgtggagaagtgtggtgttcggggttcgaaccctgaccctgcataaattatgca 3784943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 374
Target Start/End: Complemental strand, 26203781 - 26203746
Alignment:
Q  339 ccatagttttaaaactcggctcgatgatcgactcga 374  Q
    ||||||||||||||||||||||||| ||||||||||    
T  26203781 ccatagttttaaaactcggctcgatcatcgactcga 26203746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 300
Target Start/End: Original strand, 45139853 - 45139888
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||||||||||||| ||||||||||    
T  45139853 tcacacaattaaatgtggagaagtgaggtgtccggg 45139888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 414
Target Start/End: Original strand, 4414415 - 4414489
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||| | |||||||||    || | |||| |||||| |||| |||||||||||||||    
T  4414415 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactga 4414489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 298
Target Start/End: Original strand, 21863856 - 21863890
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg 298  Q
    |||||||||||||| ||||||||||||||||||||    
T  21863856 ctcacacaattaaaagtggagaagtggggtgtccg 21863890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 298
Target Start/End: Original strand, 21919717 - 21919751
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg 298  Q
    |||||||||||||| ||||||||||||||||||||    
T  21919717 ctcacacaattaaaagtggagaagtggggtgtccg 21919751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 276 - 306
Target Start/End: Original strand, 45303967 - 45303997
Alignment:
Q  276 aatgtggagaagtggggtgtccgggttcgaa 306  Q
    |||||||||||||||||||||||||||||||    
T  45303967 aatgtggagaagtggggtgtccgggttcgaa 45303997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 45849148 - 45849078
Alignment:
Q  263 actcacacaattaaat-gtggagaagtggggtgtcc-gggttcgaa-tcc-gaccctgcataaaatatgca 329  Q
    |||||||||||||||| |||||||||||| |||||| ||||||||| ||| | ||||||||||||||||||    
T  45849148 actcacacaattaaattgtggagaagtggagtgtccagggttcgaactccagcccctgcataaaatatgca 45849078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 265 - 307
Target Start/End: Original strand, 47678566 - 47678608
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtccgggttcgaat 307  Q
    |||||||||||||| ||||||| |||||||| |||||||||||    
T  47678566 tcacacaattaaatatggagaattggggtgttcgggttcgaat 47678608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 308
Target Start/End: Original strand, 9764994 - 9765039
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatc 308  Q
    |||||||| |||||||||||||||| |||||||| |||||||||||    
T  9764994 ctcacacatttaaatgtggagaagtagggtgtccggggttcgaatc 9765039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 11294809 - 11294877
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||| ||  | ||||||||||| ||||||    
T  11294809 ctcaaacatttaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgca 11294877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 21116885 - 21116848
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||| |||||||||||||||||||||||||| ||||||    
T  21116885 actcgcacaattaaatgtggagaagtggggtatccggg 21116848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 22788644 - 22788681
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtccggg 300  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  22788644 ctcacacaattaaattgtggagaagtggggtgtccggg 22788681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 32955315 - 32955278
Alignment:
Q  273 ttaaatgtggagaagtggggtgtccg-ggttcgaatcc 309  Q
    |||||||||||||||||||||||||| |||||||||||    
T  32955315 ttaaatgtggagaagtggggtgtccgaggttcgaatcc 32955278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 297
Target Start/End: Complemental strand, 42081834 - 42081801
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc 297  Q
    ||||||||||||||||||||||||||| ||||||    
T  42081834 ctcacacaattaaatgtggagaagtggagtgtcc 42081801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 2688195 - 2688159
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||| |||||||||||||| |||||||||||||    
T  2688195 ctcacacatttaaatgtggagaaatggggtgtccggg 2688159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 328
Target Start/End: Complemental strand, 5165956 - 5165889
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtccgggttcgaatcc--gaccctgcataaaatatgc 328  Q
    ||||||||||||||| |||||||||||| ||||| ||||||||| ||  | ||||||||| |||||||    
T  5165956 ctcacacaattaaattgtggagaagtggagtgtcggggttcgaaccccggcccctgcatataatatgc 5165889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 296
Target Start/End: Original strand, 29256959 - 29256991
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtc 296  Q
    |||||||||||||||||||||||| ||||||||    
T  29256959 ctcacacaattaaatgtggagaagcggggtgtc 29256991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 374
Target Start/End: Complemental strand, 29695537 - 29695501
Alignment:
Q  338 accatagttttaaaactcggctcgatgatcgactcga 374  Q
    |||||||||||||||||||||||| | ||||||||||    
T  29695537 accatagttttaaaactcggctcggtcatcgactcga 29695501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 414
Target Start/End: Complemental strand, 32988344 - 32988268
Alignment:
Q  338 accatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    ||||||||||||||||||||  ||   ||||||||| ||||| |  ||| |||||  ||||||||||||||||||||    
T  32988344 accatagttttaaaactcggaccggccatcgactcggtgagggtagtgggtcactaggtcattggtcgaaccactga 32988268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 300
Target Start/End: Original strand, 42044025 - 42044053
Alignment:
Q  272 attaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||    
T  42044025 attaaatgtggagaagtggggtgtccggg 42044053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 44040458 - 44040422
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||| || |||||||||||||||||||||    
T  44040458 ctcacacaattatatatggagaagtggggtgtccggg 44040422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 303
Target Start/End: Complemental strand, 50730369 - 50730329
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtccgggttc 303  Q
    ||||||||||| ||| |||||||||||||||||||||||||    
T  50730369 ctcacacaatttaattgtggagaagtggggtgtccgggttc 50730329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 51777943 - 51777875
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccgg-gttcgaa-tccga-ccctgcataaaatatgca 329  Q
    |||||||| ||||||||||||||||||| ||||||| |||||||  |||| ||||||||| ||||||||    
T  51777943 ctcacacatttaaatgtggagaagtgggatgtccggagttcgaaccccgatccctgcatataatatgca 51777875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 54534926 - 54534882
Alignment:
Q  264 ctcacaca-attaaatgtggagaagtggggtgtccg-ggttcgaa 306  Q
    |||||||| ||||||||||||||||||||||||||| ||||||||    
T  54534926 ctcacacatattaaatgtggagaagtggggtgtccgtggttcgaa 54534882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 56479197 - 56479265
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatccga-ccctgcataaaatatgca 329  Q
    ||||| |||| |||||||  ||||||||||||||| ||||||||| |||| ||||||||| ||||||||    
T  56479197 actcagacaactaaatgtaaagaagtggggtgtccggggttcgaacccgacccctgcatataatatgca 56479265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000003; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 12770467 - 12770399
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||||||||||| ||||||||| ||  | ||||||||||| ||||||    
T  12770467 ctcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgca 12770399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 481110 - 481074
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||||||||||    
T  481110 ctcacacaattaaatgtggagaagtggggtgtccggg 481074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 266 - 332
Target Start/End: Complemental strand, 2114980 - 2114912
Alignment:
Q  266 cacacaattaaatgtggagaagtggggtgtccgg-gttcgaatccgaccc-tgcataaaatatgcattg 332  Q
    |||||||||||||||||||||||||||||||||| ||||||| | | ||| ||||||||||||| ||||    
T  2114980 cacacaattaaatgtggagaagtggggtgtccggagttcgaacctggcccttgcataaaatatgtattg 2114912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 43847034 - 43846991
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaa 306  Q
    |||||||||||||||||||||||||||||||||| |||||||||    
T  43847034 ctcacacaattaaatgtggagaagtggggtgtccagggttcgaa 43846991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 264 - 298
Target Start/End: Original strand, 15856477 - 15856511
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg 298  Q
    |||||||||||||||||||||||||||||||||||    
T  15856477 ctcacacaattaaatgtggagaagtggggtgtccg 15856511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 329
Target Start/End: Complemental strand, 44444644 - 44444575
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||||||||||||| |||||||||||||||||||| ||||||||| ||  | ||||||||| ||||||||    
T  44444644 actcacacaattaattgtggagaagtggggtgtccggggttcgaaccccagcccctgcatataatatgca 44444575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 22274582 - 22274618
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||| |||||||||||||||||||||||    
T  22274582 ctcacacaattaattgtggagaagtggggtgtccggg 22274618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 17027851 - 17027894
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtccgggttcgaa 306  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  17027851 ctcacacaatttaattgtggagaagtggggtgtccgggttcgaa 17027894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 17558287 - 17558330
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtccgggttcgaa 306  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  17558287 ctcacacaatttaattgtggagaagtggggtgtccgggttcgaa 17558330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 403
Target Start/End: Complemental strand, 24279706 - 24279643
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggt 403  Q
    |||||||||||||||||| ||| | || |||| || |||||| |||| ||||||||||||||||    
T  24279706 catagttttaaaactcggatcggtcattgacttgacgaggttactgggtcactgagtcattggt 24279643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 269 - 329
Target Start/End: Complemental strand, 26797051 - 26796989
Alignment:
Q  269 acaattaaatgtggagaagtggggtgtccgggttcgaa--tccgaccctgcataaaatatgca 329  Q
    ||||||||||||| ||||||||||||||||  ||||||  || | ||||||||||||||||||    
T  26797051 acaattaaatgtgaagaagtggggtgtccgaattcgaacctcagtccctgcataaaatatgca 26796989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 263 - 298
Target Start/End: Complemental strand, 36433636 - 36433601
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccg 298  Q
    |||||||||||||||||||||||| |||||||||||    
T  36433636 actcacacaattaaatgtggagaaatggggtgtccg 36433601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 265 - 296
Target Start/End: Complemental strand, 38283222 - 38283191
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtc 296  Q
    ||||||||||||||||||||||||||||||||    
T  38283222 tcacacaattaaatgtggagaagtggggtgtc 38283191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 298
Target Start/End: Original strand, 3949052 - 3949086
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg 298  Q
    ||||||||||||| |||||||||||||||||||||    
T  3949052 ctcacacaattaattgtggagaagtggggtgtccg 3949086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 414
Target Start/End: Complemental strand, 19726816 - 19726742
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||| | |||||||||  | || | |||| ||| || |||| |||||||||||||||    
T  19726816 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactga 19726742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 27846026 - 27845956
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacca 410  Q
    |||||||||||||||||| ||| | || |||||| ||| ||| |||| | |||||||||||||| ||||||    
T  27846026 catagttttaaaactcggatcggtcattgactcggtgaagttactgggttactgagtcattggttgaacca 27845956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 36823545 - 36823475
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacca 410  Q
    ||||||||||||||||||  || | || |||||| ||||||| |||| ||||||||| |||||| ||||||    
T  36823545 catagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagttattggttgaacca 36823475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 414
Target Start/End: Original strand, 42063462 - 42063536
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||| | |||||||||  | || | |||| ||| || |||| |||||||||||||||    
T  42063462 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactga 42063536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 264 - 298
Target Start/End: Original strand, 44088927 - 44088961
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg 298  Q
    ||||||||||||||| |||||||||||||||||||    
T  44088927 ctcacacaattaaatatggagaagtggggtgtccg 44088961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 11231519 - 11231451
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||| ||  | ||||||||||| ||||||    
T  11231519 ctcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgca 11231451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 329
Target Start/End: Original strand, 20872429 - 20872497
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg-ttcgaa-tccga-ccctgcataaaatatgca 329  Q
    |||||||||||||||||||| |||||||||||| |||| |||||| ||||| ||||||||||| ||||||    
T  20872429 actcacacaattaaatgtgg-gaagtggggtgttcgggattcgaactccgacccctgcataaattatgca 20872497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 25812180 - 25812248
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtc-cgggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||||||| |||||||||||||||  ||||||||| ||  |||||| |||||| ||||||    
T  25812180 ctcacacaattaaatgttgagaagtggggtgtctggggttcgaaccccggaccctccataaattatgca 25812248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 31406856 - 31406788
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg-ggttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||| ||| |||| |||||||| ||  | ||||||||||| ||||||    
T  31406856 ctcacacaattaaatgtggagaagtgtggtatccgaggttcgaaccccggcccctgcataaattatgca 31406788  T

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Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 425
Target Start/End: Original strand, 36833904 - 36833989
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactgaaacgttgatcg 425  Q
    |||||||||||||||||||||| | |||||||||    || | |||| ||| || |||| |||||||||||||||| | |||||||    
T  36833904 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattgggtcaatggtcgaaccactgaatcattgatcg 36833989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Complemental strand, 41458394 - 41458326
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg-ggttcgaatcc--gaccctgcataaaatatgca 329  Q
    |||||||| |||||||||||||||||| ||||||| |||||||| ||  | ||||||||| ||||||||    
T  41458394 ctcacacatttaaatgtggagaagtggagtgtccgaggttcgaaacccagcccctgcatataatatgca 41458326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 341 - 414
Target Start/End: Complemental strand, 44056604 - 44056531
Alignment:
Q  341 atagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    ||||||||||||||| ||||||| |||||||||    || | ||| ||||||| |||| |||||||||||||||    
T  44056604 atagttttaaaactcagctcgatcatcgactcggcaggggtactgaatcactgggtcaatggtcgaaccactga 44056531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 300
Target Start/End: Complemental strand, 3828412 - 3828380
Alignment:
Q  268 cacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||| |||||||||||||||||||||||    
T  3828412 cacaattaattgtggagaagtggggtgtccggg 3828380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 31712648 - 31712612
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||  |||||||||||||||||||||||||||    
T  31712648 ctcacacatataaatgtggagaagtggggtgtccggg 31712612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 338 - 414
Target Start/End: Complemental strand, 41726463 - 41726387
Alignment:
Q  338 accatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||||| | |||||||||  |  | | |||| ||| || |||| |||||||||||||||    
T  41726463 accatagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcaatgggtcaatggtcgaaccactga 41726387  T

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Target: scaffold0154 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 28792 - 28828
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||||||||||    
T  28792 ctcacacaattaaatgtggagaagtggggtgtccggg 28828  T

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Target: chr2 (Bit Score: 37; Significance: 0.00000000001; HSPs: 22)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 3596349 - 3596313
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||||||||||||||||||||||||||||||||    
T  3596349 ctcacacaattaaatgtggagaagtggggtgtccggg 3596313  T

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Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 407
Target Start/End: Original strand, 12340395 - 12340463
Alignment:
Q  339 ccatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaa 407  Q
    ||||||||||||||||||||||| |||| |||||| | | ||| |||| ||| ||||||||||||||||    
T  12340395 ccatagttttaaaactcggctcggtgattgactcggtaatgttactgggtcaatgagtcattggtcgaa 12340463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 44558100 - 44558033
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||||||||||||||||||||||| ||||||||| ||  | ||||||||||| ||||||    
T  44558100 tcacacaattaaatgtggagaagtggggtgtccggggttcgaaccccagcccctgcataaattatgca 44558033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 339 - 414
Target Start/End: Original strand, 18540657 - 18540732
Alignment:
Q  339 ccatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    ||||||||||||||||||||||||| |||||||||    || | |||||||| || |||| |||||||||||||||    
T  18540657 ccatagttttaaaactcggctcgatcatcgactcggaaggggtactggatcattgggtcactggtcgaaccactga 18540732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 410
Target Start/End: Complemental strand, 37254937 - 37254867
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaacca 410  Q
    ||||||||||||||||||  || | || |||||| ||||||| |||| |||||||||||||||| ||||||    
T  37254937 catagttttaaaactcggaccggtcattgactcggtgaggttactgggtcactgagtcattggttgaacca 37254867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 264 - 297
Target Start/End: Complemental strand, 22333874 - 22333841
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc 297  Q
    ||||||||||||||||||||||||||||||||||    
T  22333874 ctcacacaattaaatgtggagaagtggggtgtcc 22333841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 43146456 - 43146419
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  43146456 actcacacaattaaatgtggagaagtggggtgttcggg 43146419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 1964452 - 1964416
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||||| |||||||||||||||||||||    
T  1964452 ctcacacaattaaatatggagaagtggggtgtccggg 1964416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 13242702 - 13242770
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccg-ggttcgaa-tccga-ccctgcataaaatatgca 329  Q
    |||||||||||||||||||||||||| |||||||| ||||||||  |||| ||||||||||| ||||||    
T  13242702 ctcacacaattaaatgtggagaagtgaggtgtccgaggttcgaaccccgacccctgcataaattatgca 13242770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 20919709 - 20919673
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||| ||||||||||||||||||||||||||||||    
T  20919709 ctcacataattaaatgtggagaagtggggtgtccggg 20919673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 415
Target Start/End: Original strand, 24128753 - 24128828
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactgaa 415  Q
    |||||||||||||||||||||| | |||||||||  | || | |||| ||| || |||| ||||||||||||||||    
T  24128753 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgaa 24128828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 339 - 414
Target Start/End: Complemental strand, 35305400 - 35305325
Alignment:
Q  339 ccatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    ||||||||||||||||||||||| | |||||||||    || | |||| |||||| |||| |||||||||||||||    
T  35305400 ccatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactga 35305325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 414
Target Start/End: Original strand, 17513020 - 17513094
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||| | |||||||||  | || | |||| ||| || |||| |||||||||||||||    
T  17513020 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactga 17513094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 3287027 - 3287095
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||||||||||||||||| || ||| ||||||||| ||  | ||||||||| ||||||||    
T  3287027 ctcacacaattaaatgtggagaagtggagtatccggggttcgaaccccggcccctgcatataatatgca 3287095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 330
Target Start/End: Original strand, 3439340 - 3439401
Alignment:
Q  271 aattaaatgtggagaagtggggtgtccgg-gttcgaatccga-ccctgcataaaatatgcat 330  Q
    ||||||||||||||||| ||||||||||| |||| || | || |||||||||||||||||||    
T  3439340 aattaaatgtggagaagcggggtgtccggagttcaaacctgacccctgcataaaatatgcat 3439401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 5613054 - 5613017
Alignment:
Q  264 ctcacacaattaaat-gtggagaagtggggtgtccggg 300  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  5613054 ctcacacaattaaattgtggagaagtggggtgtccggg 5613017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 340 - 373
Target Start/End: Complemental strand, 10810661 - 10810628
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcg 373  Q
    |||||||||||||||||||||||| |||||||||    
T  10810661 catagttttaaaactcggctcgatcatcgactcg 10810628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 337 - 414
Target Start/End: Complemental strand, 23293292 - 23293215
Alignment:
Q  337 aaccatagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    ||||||||||||||||||||||||| | || ||||||  |||| | |||| ||| || || | |||||||||||||||    
T  23293292 aaccatagttttaaaactcggctcggtcattgactcggcgagggtactgggtcaatgggtgaatggtcgaaccactga 23293215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 265 - 329
Target Start/End: Complemental strand, 3154095 - 3154028
Alignment:
Q  265 tcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||||| |||||||||| |||||| ||||||||| ||  | ||||||||||| ||||||    
T  3154095 tcacacaattaaatgaggagaagtggagtgtccagggttcgaaccccggtccctgcataaattatgca 3154028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Complemental strand, 4878308 - 4878272
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||  |||||||||||||||||||||||||||    
T  4878308 ctcacacatataaatgtggagaagtggggtgtccggg 4878272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 337 - 373
Target Start/End: Complemental strand, 21800789 - 21800753
Alignment:
Q  337 aaccatagttttaaaactcggctcgatgatcgactcg 373  Q
    ||||||||||||||||||||||||| | |||||||||    
T  21800789 aaccatagttttaaaactcggctcggtcatcgactcg 21800753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 268 - 300
Target Start/End: Complemental strand, 41246481 - 41246449
Alignment:
Q  268 cacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||||||||| |||||||||||||||||||    
T  41246481 cacaattaaatgtagagaagtggggtgtccggg 41246449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1005 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold1005
Description:

Target: scaffold1005; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 264 - 306
Target Start/End: Complemental strand, 2931 - 2888
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaa 306  Q
    |||||||||||||||||||||||||| ||||||| |||||||||    
T  2931 ctcacacaattaaatgtggagaagtgaggtgtccagggttcgaa 2888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 340 - 411
Target Start/End: Original strand, 51909 - 51980
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccac 411  Q
    |||||||||||||||||||||| | |||||||||  | || | |||| ||| ||||||| ||||||||||||    
T  51909 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccac 51980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 414
Target Start/End: Complemental strand, 11136 - 11062
Alignment:
Q  340 catagttttaaaactcggctcgatgatcgactcgatgaggttcctggatcactgagtcattggtcgaaccactga 414  Q
    |||||||||||||||||||||| | |||||||||  | || | |||| ||| || |||| |||||||||||||||    
T  11136 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactga 11062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 264 - 329
Target Start/End: Original strand, 2933 - 3001
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtcc-gggttcgaatcc--gaccctgcataaaatatgca 329  Q
    ||||||||||||| ||| |||||||||||||||| ||||||||| ||  | ||||||||||| ||||||    
T  2933 ctcacacaattaattgtcgagaagtggggtgtccggggttcgaaccccggcccctgcataaattatgca 3001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0257 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0257
Description:

Target: scaffold0257; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 21894 - 21857
Alignment:
Q  263 actcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    ||||||| |||||||||||||||| |||||||||||||    
T  21894 actcacaaaattaaatgtggagaattggggtgtccggg 21857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 41624 - 41660
Alignment:
Q  264 ctcacacaattaaatgtggagaagtggggtgtccggg 300  Q
    |||||||| ||||| ||||||||||||||||||||||    
T  41624 ctcacacatttaaacgtggagaagtggggtgtccggg 41660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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