View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7981_low_4 (Length: 309)
Name: NF7981_low_4
Description: NF7981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7981_low_4 |
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Alignment Details
Target: chr3 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 1 - 294
Target Start/End: Complemental strand, 26915879 - 26915586
Alignment:
| Q |
1 |
aattatcaaaattagacttaactacaacaatttttattatttatgtatatgatcatttgatctttcacctctttcacattattcataaccatgcaaacta |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |
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| T |
26915879 |
aattatcaaaattagacttaactacaacaatttttattatttatgtatatgatcatttgatctttcacctcttgcacattattcataaccatgcaaatta |
26915780 |
T |
|
| Q |
101 |
gttgattaagaaatgtatcctatacacattatttgagtgagattggtaaaaactaaaatgccagttggtatgtgaagcaaggcttgattcacggcaaagt |
200 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26915779 |
gttgattaagaaatgtatcccatacacattatttgagtgagattggtaaaaactaaaatgccagttggtatgtgaagcaaggcttgattcacggcaaagt |
26915680 |
T |
|
| Q |
201 |
cgaaatcttgaaataatttagtaaagttgaagaacattaattgaatggacccttcatgagaccctgacccaaccctatcctattagatttttgt |
294 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |
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| T |
26915679 |
cgaaatcttgaaataatttagtaaagttgaagaacattaattgaatggacccttcatgagatcatgacccaaccctatcctattagatttttgt |
26915586 |
T |
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