View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7981_low_5 (Length: 268)
Name: NF7981_low_5
Description: NF7981
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7981_low_5 |
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Alignment Details
Target: chr4 (Bit Score: 241; Significance: 1e-133; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 44710009 - 44710257
Alignment:
| Q |
1 |
gacttgatgatgaatggagccttctttaaacagtctggaactaaggctgcaaattttcccaagtcagacatcaaggcaaagccggggagttttgcagcag |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
44710009 |
gacttgatgatgaatggagccttctttaaacagtctggaactaaggctgcaaattttcccaagtcagacatcaaggcaaagccagggagttttgcagcag |
44710108 |
T |
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| Q |
101 |
cgcttactcgtttttcgggttgtctaaaatgtgaagtaggcaagccatgttaagaaccagatacagcttacaagacattggaacagaggctgatctagat |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
44710109 |
cgcttactcgtttttcgggttgtctaaaatgtgaagtaggcaagccatgttaagaaccagatacagcctacaagacattggaacagaggctgatctagat |
44710208 |
T |
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| Q |
201 |
tgtagcagtagtaaaccaaggatcagacctaaaaccttagctatgtaat |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44710209 |
tgtagcagtagtaaaccaaggatcagacctaaaaccttagctatgtaat |
44710257 |
T |
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