View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7983_low_16 (Length: 245)
Name: NF7983_low_16
Description: NF7983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7983_low_16 |
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Alignment Details
Target: chr6 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 16 - 236
Target Start/End: Original strand, 270799 - 271019
Alignment:
| Q |
16 |
aagatcacttacaatgtgaaactgcatgttgcggtatttgcaacaaatcccggtccatatcttaccataataccatgtaaatatttgtgcagttattttg |
115 |
Q |
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| T |
270799 |
aagatcacttacaatgtgaaactgcatgttgcggtatttgcaacaaatcccggtccatatcttaccataataccatgtaaatatttgtgcagttattttg |
270898 |
T |
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| Q |
116 |
agaaatgatgagttggatatgattgatggtttgtgtcacactgttgcatcggtgtgtatgatgattaaactcaattaagtagccattctttctggccttg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
270899 |
agaaatgatgagttggatatgattgatggtttgtgtcacactgttgcatcggtgtgtatgatgattaaactcaattaagtagccattctttccggccttg |
270998 |
T |
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| Q |
216 |
gaacatcctttgtagaattat |
236 |
Q |
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||||||||||||||||||||| |
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| T |
270999 |
gaacatcctttgtagaattat |
271019 |
T |
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