View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7983_low_2 (Length: 483)

Name: NF7983_low_2
Description: NF7983
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7983_low_2
NF7983_low_2
[»] chr6 (10 HSPs)
chr6 (2-470)||(31564316-31564794)
chr6 (211-375)||(33416366-33416536)
chr6 (3-174)||(33385501-33385670)
chr6 (3-174)||(33259781-33259959)
chr6 (332-461)||(33385707-33385837)
chr6 (45-151)||(24631864-24631970)
chr6 (387-446)||(33281320-33281376)
chr6 (404-458)||(33416538-33416592)
chr6 (387-446)||(33301947-33302003)
chr6 (68-143)||(281808-281881)
[»] chr5 (4 HSPs)
chr5 (212-366)||(30653203-30653360)
chr5 (39-104)||(30653373-30653438)
chr5 (93-144)||(11457158-11457209)
chr5 (21-85)||(11684404-11684468)
[»] scaffold0428 (2 HSPs)
scaffold0428 (3-174)||(3869-4047)
scaffold0428 (387-446)||(12876-12932)
[»] chr2 (4 HSPs)
chr2 (329-458)||(17443374-17443503)
chr2 (109-174)||(17443537-17443602)
chr2 (69-146)||(14299588-14299663)
chr2 (128-180)||(43199930-43199982)
[»] chr8 (4 HSPs)
chr8 (68-146)||(13000381-13000457)
chr8 (68-146)||(30191098-30191174)
chr8 (3-89)||(10079082-10079168)
chr8 (40-89)||(30389108-30389157)
[»] chr3 (3 HSPs)
chr3 (68-144)||(43115093-43115167)
chr3 (68-146)||(37273171-37273247)
chr3 (71-167)||(24624250-24624344)
[»] chr7 (2 HSPs)
chr7 (31-144)||(3468614-3468725)
chr7 (68-143)||(39345508-39345581)
[»] chr1 (3 HSPs)
chr1 (95-146)||(15581316-15581367)
chr1 (71-146)||(28837002-28837075)
chr1 (40-84)||(30014095-30014139)
[»] scaffold0311 (1 HSPs)
scaffold0311 (68-143)||(10577-10650)
[»] chr4 (1 HSPs)
chr4 (69-144)||(9843212-9843285)


Alignment Details
Target: chr6 (Bit Score: 403; Significance: 0; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 2 - 470
Target Start/End: Complemental strand, 31564794 - 31564316
Alignment:
Q  2 caagataaaatgaagtcatactgttttcctataagcgattttcataagcttttctagacaacatacggaaataagctgaaaacaacttttgtggacatgt 101  Q
    |||||||||||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  31564794 caagataaaatgaagtcacactgttttcctacaagtgattttcataagcttttctagacaacatatggaaataagctgaaaacaacttttgtggacatgt 31564695  T
Q  102 cattggttgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataagttcaaatacatcaatccacaagaggcaaaacaatatgag 201  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||     
T  31564694 cattagttgtttccattaactcttcgaaacagtctcacaagtgctaatatgagtgtataagttcaaatatatcaatccacaagaggcaaaacaatatgaa 31564595  T
Q  202 aagatgggcaaaatggaagtataattcattttttctcttttacat------gtaaaaattgaaatacatgtataaattcaaatctgtctaacatatttac 295  Q
    |||||||||||||||||||||||||| ||||||||||||||||||      |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31564594 aagatgggcaaaatggaagtataattaattttttctcttttacatttacatgtaaaaattgaaatacatgtataaattcaaatctgtctaacatatttac 31564495  T
Q  296 ttctattagatgtagaaaaattagaatagaaaca----gcaaataagatgaaattgaaaccattactcgagcctttgtctgaagaagtaatgccggtttg 391  Q
    ||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31564494 ttctattagatgtagaaaaattagaatagaaacattaagcaaataagatgaaattgaaaccattactcgagcctttgtctgaagaagtaatgccggtttg 31564395  T
Q  392 tccattagaattagataagttgttgtttgtctcggatgcaattgcaacttcttcatcttcaacttgtactaccacaggt 470  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31564394 tccattagaattagataagttgttgtttgtctcggatgcaattgcaacttcttcatcttcaacttgtactaccacaggt 31564316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 211 - 375
Target Start/End: Original strand, 33416366 - 33416536
Alignment:
Q  211 aaaatggaagtataat--tcattttttctcttttacatgtaaaaattgaaatacatgtataaattcaaatctgtctaacatatttacttctattagatgt 308  Q
    |||||||||||||| |  || ||| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||| |    
T  33416366 aaaatggaagtatattcatcttttcttctcttttacatgtaaaaactgaaatacatgtataaattcaaatctgtccaacatatttacttctatttgatat 33416465  T
Q  309 agaaaaattagaatagaaa----cagcaaataagatgaaattgaaaccattactcgagcctttgtctgaag 375  Q
    |||||||| ||||| ||||     ||||||||||||||||| |||||| |||||||||||||  |||||||    
T  33416466 agaaaaatgagaattgaaatatgaagcaaataagatgaaatggaaacctttactcgagccttcatctgaag 33416536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 3 - 174
Target Start/End: Original strand, 33385501 - 33385670
Alignment:
Q  3 aagataaaatgaagtcatactgttttcctataagcgattttcataagcttttctagacaacatacggaaataagctgaaaacaacttttgtggacatgtc 102  Q
    |||||||||||||||||||||  | | |||||||| |||||||||||||||||||||||   || ||||| |||||||||||||||||| ||||||||||    
T  33385501 aagataaaatgaagtcatact--tatgctataagctattttcataagcttttctagacagtttatggaaaaaagctgaaaacaacttttatggacatgtc 33385598  T
Q  103 attggttgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataagttcaaatacatc 174  Q
    ||  | ||||||||| |||||||| ||||||| ||||||||||| |||| | |  |||||||||||| ||||    
T  33385599 atgagctgtttccataaactcttccaaacagtttcacaagtgcttatatcagtagataagttcaaatgcatc 33385670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 3 - 174
Target Start/End: Original strand, 33259781 - 33259959
Alignment:
Q  3 aagataaaatgaagtcatactgttttcctata-------agcgattttcataagcttttctagacaacatacggaaataagctgaaaacaacttttgtgg 95  Q
    |||||||| |||||||||||||||||||||||       ||| ||||||||||||||||||| |||  ||| | |||   |||||||||| ||||| |||    
T  33259781 aagataaattgaagtcatactgttttcctatatgctataagctattttcataagcttttctatacagtatatgtaaaatggctgaaaacagcttttatgg 33259880  T
Q  96 acatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataagttcaaatacatc 174  Q
    |||||||||| |  |||||||| |||||||| ||||||| |  |||||||| |||| | | ||||||||||||||||||    
T  33259881 acatgtcattagccgtttccataaactcttccaaacagtttggcaagtgcttatatcaatatataagttcaaatacatc 33259959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 332 - 461
Target Start/End: Original strand, 33385707 - 33385837
Alignment:
Q  332 aaataagatgaaattgaaaccattactcgagcctttgtctgaagaagtaatgccggtttgtccattagaattagataagttgttgtttg-tctcggatgc 430  Q
    |||||||||||||||| |||| || ||| ||||||  ||||| |  ||||| ||||||||||||||||| ||||||| | ||||||||| | |   ||||    
T  33385707 aaataagatgaaattgcaacctttgctcaagccttcatctgacgctgtaattccggtttgtccattagagttagatacgctgttgtttgttttttaatgc 33385806  T
Q  431 aattgcaacttcttcatcttcaacttgtact 461  Q
    |||||||||||||||| ||||||||||||||    
T  33385807 aattgcaacttcttcaccttcaacttgtact 33385837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 45 - 151
Target Start/End: Complemental strand, 24631970 - 24631864
Alignment:
Q  45 ataagcttttctagacaacatacggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtg 144  Q
    ||||||||||||| ||| | |  ||||||||||| |||||| ||||| ||||||| ||||  ||||||||||| |||||||| ||| ||| |||||||||    
T  24631970 ataagcttttctaaacagcttttggaaataagctaaaaacagcttttatggacatatcatgagttgtttccataaactcttccaaatagtttcacaagtg 24631871  T
Q  145 ctaatat 151  Q
    || ||||    
T  24631870 cttatat 24631864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 33281320 - 33281376
Alignment:
Q  387 gtttgtccattagaattagataagttgttgtttgtctcggatgcaattgcaacttcttca 446  Q
    ||||||||||||||||||||||   || ||||||||||||||||||||||||| ||||||    
T  33281320 gtttgtccattagaattagata---tgctgtttgtctcggatgcaattgcaacctcttca 33281376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 404 - 458
Target Start/End: Original strand, 33416538 - 33416592
Alignment:
Q  404 agataagttgttgtttgtctcggatgcaattgcaacttcttcatcttcaacttgt 458  Q
    |||||||||| ||||||| || ||||||||||||||  |||||||||||||||||    
T  33416538 agataagttgctgtttgtttcagatgcaattgcaaccgcttcatcttcaacttgt 33416592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 33301947 - 33302003
Alignment:
Q  387 gtttgtccattagaattagataagttgttgtttgtctcggatgcaattgcaacttcttca 446  Q
    ||||||||||||||||||||||   || ||||||||||||||||||| ||||| ||||||    
T  33301947 gtttgtccattagaattagata---tgatgtttgtctcggatgcaatagcaacctcttca 33302003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 281881 - 281808
Alignment:
Q  68 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagt 143  Q
    |||||||||||||||||||||| |   ||||||||||  |||| |||||||| |||| | ||||||||||||||||    
T  281881 ggaaataagctgaaaacaacttata--gacatgtcataagttgcttccattagctctcccaaacagtctcacaagt 281808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 4)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 212 - 366
Target Start/End: Complemental strand, 30653360 - 30653203
Alignment:
Q  212 aaatggaagtataattcattttttctcttttacatgtaaaaattgaaatacatgtataaattcaaatctgtctaacatatttacttctattagatgtaga 311  Q
    |||||||||||||||| |||||||||||||||||||||||||  |||| |||||||||| ||||||||||||||||||| |||||| | |||||||| ||    
T  30653360 aaatggaagtataatttattttttctcttttacatgtaaaaaccgaaagacatgtataagttcaaatctgtctaacataattactt-tgttagatgttga 30653262  T
Q  312 aaaattagaatagaaaca----gcaaataagatgaaattgaaaccattactcgagcctt 366  Q
    ||||||||||||||||||    |||||||||||||||||  |||| |||||||||||||    
T  30653261 aaaattagaatagaaacatgacgcaaataagatgaaattttaacctttactcgagcctt 30653203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 39 - 104
Target Start/End: Complemental strand, 30653438 - 30653373
Alignment:
Q  39 attttcataagcttttctagacaacatacggaaataagctgaaaacaacttttgtggacatgtcat 104  Q
    ||||||||||||||||||||||| | || |||||||||||||||||| ||||| || |||||||||    
T  30653438 attttcataagcttttctagacagcttatggaaataagctgaaaacagcttttatgaacatgtcat 30653373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 144
Target Start/End: Original strand, 11457158 - 11457209
Alignment:
Q  93 tggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtg 144  Q
    ||||||||||||  ||||||||||| | |||||| |||||||||||||||||    
T  11457158 tggacatgtcataagttgtttccataagctcttcaaaacagtctcacaagtg 11457209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 21 - 85
Target Start/End: Original strand, 11684404 - 11684468
Alignment:
Q  21 actgttttcctataagcgattttcataagcttttctagacaacatacggaaataagctgaaaaca 85  Q
    ||||||||| ||||||| ||||||||||||| | || || | | |||||||||||| ||||||||    
T  11684404 actgttttcatataagctattttcataagctatgctggagagcttacggaaataagttgaaaaca 11684468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0428
Description:

Target: scaffold0428; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 3 - 174
Target Start/End: Original strand, 3869 - 4047
Alignment:
Q  3 aagataaaatgaagtcatactgttttcctata-------agcgattttcataagcttttctagacaacatacggaaataagctgaaaacaacttttgtgg 95  Q
    |||||||| |||||||||||||||||||||||       ||| |||||||||||||||||||||||  ||| | |||   |||||||||| ||||| |||    
T  3869 aagataaactgaagtcatactgttttcctatatgctataagctattttcataagcttttctagacagtatatgtaaaatggctgaaaacagcttttatgg 3968  T
Q  96 acatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataagttcaaatacatc 174  Q
    |||||||||  |  |||||||| |||||||| ||||||||||||||||||| |||| | | ||||||||||||||||||    
T  3969 acatgtcatgagccgtttccataaactcttccaaacagtctcacaagtgcttatatcaatatataagttcaaatacatc 4047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0428; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 387 - 446
Target Start/End: Complemental strand, 12932 - 12876
Alignment:
Q  387 gtttgtccattagaattagataagttgttgtttgtctcggatgcaattgcaacttcttca 446  Q
    ||||||||||||||||||||||   || ||||||||||||||||||||||||| ||||||    
T  12932 gtttgtccattagaattagata---tgctgtttgtctcggatgcaattgcaacctcttca 12876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 2e-19; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 458
Target Start/End: Complemental strand, 17443503 - 17443374
Alignment:
Q  329 agcaaataagatgaaattgaaaccattactcgagcctttgtctgaagaagtaatgccggtttgtccattagaattagataagttgttgtttgtctcggat 428  Q
    ||||||||||||||||||| |||| ||  || ||||||  |||||||  ||||||| ||||||||||||||| ||||||| |   |||||||| ||  ||    
T  17443503 agcaaataagatgaaattgcaacctttggtcaagccttcatctgaagctgtaatgctggtttgtccattagagttagatacgccattgtttgtttcaaat 17443404  T
Q  429 gcaattgcaacttcttcatcttcaacttgt 458  Q
    ||||||||||||||||||  ||||||||||    
T  17443403 gcaattgcaacttcttcacgttcaacttgt 17443374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 109 - 174
Target Start/End: Complemental strand, 17443602 - 17443537
Alignment:
Q  109 tgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataagttcaaatacatc 174  Q
    ||||||||| |||||||| ||||||||||||||||||| |||| | | ||||||||||||||||||    
T  17443602 tgtttccataaactcttccaaacagtctcacaagtgcttatatcagtatataagttcaaatacatc 17443537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 69 - 146
Target Start/End: Complemental strand, 14299663 - 14299588
Alignment:
Q  69 gaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 146  Q
    ||||||||||||||||||  | | |||| |||||||  ||||||||||| |||||||| |||||||| | ||||||||    
T  14299663 gaaataagctgaaaacaa--tgtatggatatgtcataagttgtttccataaactcttccaaacagtccctcaagtgct 14299588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 128 - 180
Target Start/End: Original strand, 43199930 - 43199982
Alignment:
Q  128 aaacagtctcacaagtgctaatatgactgtataagttcaaatacatcaatcca 180  Q
    ||||||||||||||||||| |||||| |  ||||||||||||| || ||||||    
T  43199930 aaacagtctcacaagtgcttatatgagtagataagttcaaataaatgaatcca 43199982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 13000457 - 13000381
Alignment:
Q  68 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 146  Q
    ||||||||||||||||||||||  |||||||||||||  |||||| |||| |||||||  ||| |||||||||||||||    
T  13000457 ggaaataagctgaaaacaactt--gtggacatgtcataagttgttaccataaactcttgcaaatagtctcacaagtgct 13000381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 30191174 - 30191098
Alignment:
Q  68 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 146  Q
    ||||||||||||||||||| |||||   |||||||||  ||||||||||| | |||| | ||||||||| |||||||||    
T  30191174 ggaaataagctgaaaacaagttttga--acatgtcataagttgtttccataagctctcccaaacagtctaacaagtgct 30191098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 89
Target Start/End: Complemental strand, 10079168 - 10079082
Alignment:
Q  3 aagataaaatgaagtcatactgttttcctataagcgattttcataagcttttctagacaacatacggaaataagctgaaaacaactt 89  Q
    ||||||||||||||||| ||||||||| |||||||  ||||||| |||| |||| || |   || ||||| ||||| ||||||||||    
T  10079168 aagataaaatgaagtcaaactgttttcgtataagctgttttcatgagctattctggaaagtttatggaaagaagcttaaaacaactt 10079082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 89
Target Start/End: Original strand, 30389108 - 30389157
Alignment:
Q  40 ttttcataagcttttctagacaacatacggaaataagctgaaaacaactt 89  Q
    |||||||||||||| ||||| ||| || | ||||||||||||||||||||    
T  30389108 ttttcataagctttcctagagaacttatgaaaataagctgaaaacaactt 30389157  T

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Target: chr3 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 68 - 144
Target Start/End: Original strand, 43115093 - 43115167
Alignment:
Q  68 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtg 144  Q
    ||||||||||||||||||| || ||  ||||||||||  ||||||||||| |||||||| ||||| |||||||||||    
T  43115093 ggaaataagctgaaaacaagttatg--gacatgtcataagttgtttccataaactcttccaaacaatctcacaagtg 43115167  T

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Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 37273171 - 37273247
Alignment:
Q  68 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 146  Q
    ||||||||| |||||||||||| ||  ||||||||||  ||||||||||| | |||| | |||||||||||| ||||||    
T  37273171 ggaaataagttgaaaacaacttatg--gacatgtcataagttgtttccataagctctcccaaacagtctcaccagtgct 37273247  T

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Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 71 - 167
Target Start/End: Original strand, 24624250 - 24624344
Alignment:
Q  71 aataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgctaatatgactgtataagttcaa 167  Q
    |||||||||||||||   ||| ||||||||||||  | ||||| ||| | |||||| ||||||||| |||||||||||| ||| |  ||||||||||    
T  24624250 aataagctgaaaacag--tttatggacatgtcataagctgttttcataagctcttccaaacagtcttacaagtgctaatgtgagtagataagttcaa 24624344  T

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Target: chr7 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 144
Target Start/End: Original strand, 3468614 - 3468725
Alignment:
Q  31 tataagcgattttcataagcttttctagacaacatacggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaa 130  Q
    |||||||  ||||||||| || | ||||| ||| |  ||||||||| || ||||||||| ||  ||||||||||| ||||||||||  |||||| |||||    
T  3468614 tataagcttttttcataatctatcctagagaacttgtggaaataagttggaaacaacttatg--gacatgtcattagttgtttccaacaactctccgaaa 3468711  T
Q  131 cagtctcacaagtg 144  Q
    |||||||| |||||    
T  3468712 cagtctcaaaagtg 3468725  T

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Target: chr7; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 143
Target Start/End: Original strand, 39345508 - 39345581
Alignment:
Q  68 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagt 143  Q
    ||||||||||||||| |||||| ||  ||||||||||    ||||||||| |||||| | ||||||||||||||||    
T  39345508 ggaaataagctgaaagcaacttatg--gacatgtcataaactgtttccatgaactctaccaaacagtctcacaagt 39345581  T

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Target: chr1 (Bit Score: 32; Significance: 0.00000001; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 95 - 146
Target Start/End: Original strand, 15581316 - 15581367
Alignment:
Q  95 gacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 146  Q
    ||||||||||  ||||||||||||| |||||| ||||| |||||||||||||    
T  15581316 gacatgtcataagttgtttccattagctcttccaaacaatctcacaagtgct 15581367  T

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Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 71 - 146
Target Start/End: Complemental strand, 28837075 - 28837002
Alignment:
Q  71 aataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtgct 146  Q
    ||||||||||||||| ||| ||||  ||||||||| | |||||   |||| ||||| |||||||||||||||||||    
T  28837075 aataagctgaaaacagcttatgtg--catgtcattagctgttttggttaagtcttctaaacagtctcacaagtgct 28837002  T

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Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 40 - 84
Target Start/End: Complemental strand, 30014139 - 30014095
Alignment:
Q  40 ttttcataagcttttctagacaacatacggaaataagctgaaaac 84  Q
    |||||||||||| | ||||| ||| ||||||||||||||||||||    
T  30014139 ttttcataagctatgctagagaacttacggaaataagctgaaaac 30014095  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 68 - 143
Target Start/End: Complemental strand, 10650 - 10577
Alignment:
Q  68 ggaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagt 143  Q
    ||||||||||||||||||||  || ||||||||||||| ||||||| ||| | || |   ||||||||||||||||    
T  10650 ggaaataagctgaaaacaac--ttatggacatgtcattagttgtttacataagctttgtcaaacagtctcacaagt 10577  T

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Target: chr4 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 69 - 144
Target Start/End: Complemental strand, 9843285 - 9843212
Alignment:
Q  69 gaaataagctgaaaacaacttttgtggacatgtcattggttgtttccattaactcttcgaaacagtctcacaagtg 144  Q
    |||||||||||||||||||  || |||| |||| ||| ||||||| | | | ||||| ||||||||||||||||||    
T  9843285 gaaataagctgaaaacaac--ttatggatatgtgattagttgttttcttaatctctttgaaacagtctcacaagtg 9843212  T

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