View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7985_low_13 (Length: 235)
Name: NF7985_low_13
Description: NF7985
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7985_low_13 |
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Alignment Details
Target: chr1 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 42631990 - 42632213
Alignment:
| Q |
1 |
ttagataccctttttcgttgtgaattctgggtatgcttcaaaattttattttttgtttgttgcaggatcctgttgttagaccaattagtgaattaggccc |
100 |
Q |
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| T |
42631990 |
ttagataccctttttcgttgtgaattctgggtatgcttcaaaattttattttttgtttgttgcaggatcctgttgttagaccaattagtgaattaggccc |
42632089 |
T |
|
| Q |
101 |
acttgctttgcaagaacttatgcctgagattcctctctgggtgaagacacctgattatgaaagagttagtttgttttttcaatattttgtttataagttc |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
42632090 |
gcttgctttgcaagaacttatgcctgagattcctctctgggtgaagacacctgattatgaaagagttagttttttttttcaatattttgtttataagttc |
42632189 |
T |
|
| Q |
201 |
tgaacttcaaattttgatgatttt |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
42632190 |
tgaacttcaaattttgatgatttt |
42632213 |
T |
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