View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7986_low_3 (Length: 253)
Name: NF7986_low_3
Description: NF7986
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7986_low_3 |
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Alignment Details
Target: chr1 (Bit Score: 218; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 11 - 232
Target Start/End: Complemental strand, 28320123 - 28319902
Alignment:
| Q |
11 |
acaaaatgaacgaataccactgagagtaatagtgcaggtcttgttttttgaacaacttcgacttcgtacatcaatttctagttggttgtttgtttcagac |
110 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28320123 |
acaaaatgaacggataccactgagagtaatagtgcaggtcttgttttttgaacaacttcgacttcgtacatcaatttctagttggttgtttgtttcagac |
28320024 |
T |
|
| Q |
111 |
aaccttgagacttcacaaagtgcaaattttggattctcaaggagtaatggaaatggtcaagtggaccctacacaaggtggtgaaaacttgagggatcgtg |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28320023 |
aaccttgagacttcacaaagtgcaaattttggattctcaaggagtaatggaaatggtcaagtggaccctacacaaggtggtgaaaacttgagggatcgtg |
28319924 |
T |
|
| Q |
211 |
tatcagagctagagaaggaatg |
232 |
Q |
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|||||||||||||||||||||| |
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| T |
28319923 |
tatcagagctagagaaggaatg |
28319902 |
T |
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