View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7987_high_11 (Length: 454)
Name: NF7987_high_11
Description: NF7987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7987_high_11 |
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Alignment Details
Target: chr7 (Bit Score: 403; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 19 - 446
Target Start/End: Original strand, 21829555 - 21829982
Alignment:
| Q |
19 |
ctgaccctcctcctcttttacttccaaatttccctttcttcttaaccaaactatgagtatcaacannnnnnnctctttccatagaagaaagcaaagaagg |
118 |
Q |
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| T |
21829555 |
ctgaccctcctcctcttttacttccaaatttccctttcttcttaaccaaactatgagtatcaacatttttttctctttccattgaagaaagcaaagaagg |
21829654 |
T |
|
| Q |
119 |
atgaataggagtaagattcccttcctcacctctcatactcataacctcacattcttgaacttcccaaatatgtatcactttatcctcaccagcagtagcc |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829655 |
atgaataggagtaagattcccttcctcacctctcatactcataacctcacattcttgaacttcccaaatatgtatcactttatcctcaccagcagtagcc |
21829754 |
T |
|
| Q |
219 |
aaaaaccttccatccaaactaaacttcatagtccaaatacacccttcatgtgcttgaaattcttgacataaatgcaaagctgaaagctctttttgtgatt |
318 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829755 |
aaaaaccttccatccaaactaaacttcatagtccaaatacacccttcatgtgcttgaaattcttgacataaatgcaaagctgaaagctctttttgtgatt |
21829854 |
T |
|
| Q |
319 |
tcccactttgcctaaccttaacccatttattcttcccttgagttttattttgatcaacaacttgtggtacaacaacttctctttcacgttcaccaacaat |
418 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21829855 |
tcccactttgcctaaccttaacccatttattcttcccttgagttttattttgatcaacaacttgtggtacaacaacttctctttcacgttcaccaacaat |
21829954 |
T |
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| Q |
419 |
tccacttgctacacctttaatattcttc |
446 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
21829955 |
tccacttgctacacctttaatattcttc |
21829982 |
T |
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