View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7987_high_36 (Length: 258)

Name: NF7987_high_36
Description: NF7987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7987_high_36
NF7987_high_36
[»] chr7 (46 HSPs)
chr7 (31-249)||(29019239-29019459)
chr7 (85-171)||(4048395-4048481)
chr7 (88-146)||(11975541-11975599)
chr7 (91-160)||(6694718-6694787)
chr7 (92-160)||(27576520-27576588)
chr7 (75-160)||(30869570-30869657)
chr7 (75-146)||(6694625-6694697)
chr7 (88-145)||(27280709-27280766)
chr7 (74-160)||(29710489-29710577)
chr7 (75-160)||(4048282-4048369)
chr7 (88-146)||(40951724-40951782)
chr7 (88-146)||(40951829-40951887)
chr7 (88-146)||(43258440-43258498)
chr7 (91-160)||(3198291-3198360)
chr7 (88-160)||(11975625-11975698)
chr7 (88-231)||(42312764-42312911)
chr7 (85-146)||(43258338-43258399)
chr7 (108-160)||(27576596-27576648)
chr7 (108-160)||(29710340-29710392)
chr7 (108-160)||(30662175-30662227)
chr7 (108-160)||(31453047-31453099)
chr7 (88-160)||(44293852-44293924)
chr7 (88-160)||(44293957-44294029)
chr7 (88-241)||(6222075-6222230)
chr7 (85-129)||(3198404-3198448)
chr7 (91-139)||(26978325-26978373)
chr7 (88-160)||(41666329-41666401)
chr7 (108-146)||(27280874-27280912)
chr7 (108-146)||(42313056-42313094)
chr7 (108-153)||(22750343-22750388)
chr7 (90-146)||(22750410-22750466)
chr7 (108-160)||(29710585-29710637)
chr7 (108-160)||(44294037-44294089)
chr7 (111-146)||(4048236-4048271)
chr7 (107-146)||(6694565-6694604)
chr7 (108-159)||(11975706-11975757)
chr7 (108-155)||(30869665-30869712)
chr7 (104-146)||(6069262-6069304)
chr7 (108-146)||(11975481-11975519)
chr7 (112-146)||(26185969-26186003)
chr7 (111-145)||(44293811-44293845)
chr7 (109-146)||(27280815-27280852)
chr7 (85-154)||(46713296-46713365)
chr7 (108-160)||(29710400-29710451)
chr7 (99-139)||(41666245-41666285)
chr7 (108-156)||(46713235-46713282)
[»] chr2 (41 HSPs)
chr2 (75-249)||(25895086-25895266)
chr2 (75-146)||(11791769-11791842)
chr2 (88-163)||(30265456-30265531)
chr2 (73-160)||(36694482-36694571)
chr2 (88-160)||(31630145-31630217)
chr2 (88-146)||(9500999-9501057)
chr2 (75-146)||(31630246-31630318)
chr2 (91-145)||(4188657-4188711)
chr2 (75-146)||(4188983-4189056)
chr2 (75-156)||(12612470-12612552)
chr2 (89-146)||(5009360-5009416)
chr2 (88-160)||(33847619-33847691)
chr2 (88-146)||(1316129-1316187)
chr2 (88-146)||(3876923-3876981)
chr2 (92-146)||(4511942-4511996)
chr2 (88-146)||(5009257-5009315)
chr2 (88-160)||(36694394-36694465)
chr2 (73-146)||(8035438-8035513)
chr2 (88-160)||(25894985-25895057)
chr2 (91-150)||(4511478-4511537)
chr2 (88-146)||(14166374-14166432)
chr2 (98-160)||(29379888-29379950)
chr2 (108-149)||(1316066-1316107)
chr2 (89-146)||(44556619-44556676)
chr2 (88-140)||(4511871-4511923)
chr2 (108-160)||(9500925-9500977)
chr2 (99-146)||(43699435-43699482)
chr2 (88-146)||(3876821-3876879)
chr2 (108-146)||(33847698-33847736)
chr2 (108-146)||(36217208-36217246)
chr2 (93-146)||(11791411-11791464)
chr2 (89-146)||(39442418-39442474)
chr2 (98-146)||(4512049-4512097)
chr2 (108-160)||(39442254-39442306)
chr2 (108-156)||(44556549-44556597)
chr2 (107-146)||(5009193-5009232)
chr2 (104-151)||(6694117-6694164)
chr2 (88-122)||(14166018-14166052)
chr2 (108-146)||(31630339-31630377)
chr2 (112-140)||(3876768-3876796)
chr2 (91-135)||(12001792-12001836)
[»] chr5 (66 HSPs)
chr5 (74-231)||(16327103-16327266)
chr5 (85-156)||(1996226-1996297)
chr5 (91-160)||(28559315-28559384)
chr5 (89-146)||(7209882-7209939)
chr5 (88-160)||(16327284-16327356)
chr5 (88-160)||(28559421-28559493)
chr5 (85-142)||(35813386-35813443)
chr5 (75-160)||(5746277-5746364)
chr5 (89-160)||(5746175-5746246)
chr5 (88-146)||(23661971-23662029)
chr5 (88-146)||(23796541-23796599)
chr5 (88-160)||(10827290-10827362)
chr5 (108-160)||(20928081-20928133)
chr5 (88-160)||(25456355-25456427)
chr5 (88-160)||(35461516-35461588)
chr5 (88-160)||(36759683-36759755)
chr5 (88-146)||(4943084-4943143)
chr5 (88-160)||(17400730-17400804)
chr5 (88-146)||(7210250-7210308)
chr5 (74-163)||(12774318-12774411)
chr5 (88-154)||(33491598-33491664)
chr5 (88-146)||(36760783-36760841)
chr5 (88-146)||(37642888-37642946)
chr5 (85-143)||(38682787-38682845)
chr5 (89-160)||(17400624-17400695)
chr5 (74-146)||(23662047-23662121)
chr5 (91-146)||(35187994-35188049)
chr5 (88-146)||(4942992-4943050)
chr5 (74-163)||(12713054-12713147)
chr5 (88-146)||(20927939-20927997)
chr5 (88-146)||(37642979-37643037)
chr5 (108-153)||(12713152-12713197)
chr5 (108-153)||(12774416-12774461)
chr5 (74-145)||(33491682-33491754)
chr5 (89-146)||(35813485-35813542)
chr5 (111-160)||(35813566-35813615)
chr5 (108-160)||(17400812-17400864)
chr5 (108-160)||(23661899-23661951)
chr5 (108-160)||(23796619-23796671)
chr5 (108-143)||(14604102-14604137)
chr5 (91-146)||(28022136-28022191)
chr5 (108-158)||(37032963-37033011)
chr5 (88-146)||(14604160-14604218)
chr5 (92-146)||(20181435-20181489)
chr5 (108-146)||(35461470-35461508)
chr5 (103-156)||(14604266-14604319)
chr5 (108-145)||(25456310-25456347)
chr5 (96-231)||(35461629-35461768)
chr5 (108-144)||(10827143-10827179)
chr5 (88-160)||(10827187-10827257)
chr5 (92-151)||(38680714-38680773)
chr5 (108-146)||(1996176-1996214)
chr5 (108-146)||(4943166-4943204)
chr5 (108-146)||(5746129-5746167)
chr5 (108-146)||(19550133-19550171)
chr5 (108-146)||(23662144-23662182)
chr5 (108-146)||(32361202-32361240)
chr5 (108-146)||(40980745-40980783)
chr5 (115-156)||(4943234-4943275)
chr5 (88-129)||(12712995-12713036)
chr5 (88-129)||(12774259-12774300)
chr5 (98-231)||(25456470-25456606)
chr5 (91-160)||(32361248-32361317)
chr5 (108-160)||(28559501-28559553)
chr5 (98-146)||(35811999-35812047)
chr5 (108-156)||(35812181-35812229)
[»] chr6 (32 HSPs)
chr6 (74-160)||(17136924-17137012)
chr6 (88-160)||(21598631-21598703)
chr6 (88-146)||(2761495-2761553)
chr6 (88-146)||(17342626-17342684)
chr6 (88-231)||(21598450-21598597)
chr6 (88-160)||(9982750-9982822)
chr6 (73-146)||(17342534-17342609)
chr6 (88-160)||(24059745-24059817)
chr6 (89-160)||(13273252-13273323)
chr6 (88-146)||(2761587-2761645)
chr6 (90-160)||(35225478-35225548)
chr6 (91-160)||(10356450-10356519)
chr6 (88-156)||(35050620-35050688)
chr6 (74-160)||(9982840-9982927)
chr6 (108-160)||(10356281-10356333)
chr6 (87-142)||(13273163-13273218)
chr6 (104-146)||(364199-364241)
chr6 (88-142)||(35225594-35225648)
chr6 (109-146)||(9982936-9982973)
chr6 (107-160)||(21598710-21598763)
chr6 (108-160)||(10356341-10356393)
chr6 (108-160)||(10356527-10356579)
chr6 (108-156)||(17136868-17136916)
chr6 (95-146)||(364079-364130)
chr6 (75-146)||(3848582-3848655)
chr6 (108-160)||(19557904-19557956)
chr6 (108-160)||(35050731-35050783)
chr6 (109-160)||(35225418-35225469)
chr6 (108-146)||(9982704-9982742)
chr6 (88-146)||(31091261-31091318)
chr6 (109-146)||(35050847-35050884)
chr6 (88-140)||(13812284-13812336)
[»] chr4 (62 HSPs)
chr4 (88-160)||(45038361-45038433)
chr4 (74-160)||(53863397-53863485)
chr4 (88-160)||(41083239-41083311)
chr4 (89-160)||(17232008-17232079)
chr4 (88-146)||(51950564-51950622)
chr4 (88-160)||(40395284-40395356)
chr4 (88-160)||(12592259-12592331)
chr4 (88-160)||(41083134-41083206)
chr4 (88-160)||(53863503-53863575)
chr4 (85-156)||(24369246-24369317)
chr4 (91-154)||(24684134-24684197)
chr4 (75-163)||(41519218-41519308)
chr4 (75-146)||(2787979-2788051)
chr4 (85-146)||(24684230-24684291)
chr4 (74-160)||(26782373-26782460)
chr4 (92-160)||(40395179-40395247)
chr4 (89-160)||(9999476-9999547)
chr4 (88-146)||(12498714-12498772)
chr4 (88-240)||(12498805-12498961)
chr4 (88-146)||(26782478-26782536)
chr4 (98-160)||(41519347-41519409)
chr4 (88-146)||(45787219-45787277)
chr4 (88-146)||(51950666-51950724)
chr4 (85-146)||(9999383-9999444)
chr4 (109-160)||(7246072-7246123)
chr4 (88-159)||(55617537-55617607)
chr4 (88-159)||(55624841-55624911)
chr4 (88-146)||(12592375-12592433)
chr4 (88-140)||(7246209-7246261)
chr4 (108-160)||(7246289-7246341)
chr4 (108-156)||(40146976-40147024)
chr4 (108-160)||(45038266-45038318)
chr4 (196-231)||(24684283-24684318)
chr4 (108-146)||(2469933-2469971)
chr4 (108-146)||(7246026-7246064)
chr4 (108-146)||(11884650-11884688)
chr4 (108-146)||(21322035-21322073)
chr4 (91-141)||(40147050-40147100)
chr4 (88-146)||(40147147-40147205)
chr4 (108-146)||(46196144-46196182)
chr4 (109-146)||(2788160-2788197)
chr4 (99-160)||(11884811-11884872)
chr4 (114-151)||(17236803-17236840)
chr4 (88-145)||(25055978-25056035)
chr4 (88-145)||(25056079-25056135)
chr4 (115-156)||(53863591-53863632)
chr4 (108-156)||(2470173-2470221)
chr4 (88-160)||(11884696-11884768)
chr4 (108-156)||(25055905-25055953)
chr4 (108-160)||(41083319-41083371)
chr4 (108-156)||(45038441-45038489)
chr4 (108-160)||(46196383-46196435)
chr4 (108-146)||(12697115-12697154)
chr4 (88-146)||(2470093-2470151)
chr4 (108-158)||(40395121-40395171)
chr4 (108-146)||(41083088-41083126)
chr4 (108-146)||(44057328-44057366)
chr4 (108-146)||(50290403-50290441)
chr4 (109-146)||(12498654-12498691)
chr4 (88-136)||(2470002-2470049)
chr4 (196-240)||(50290179-50290223)
chr4 (110-146)||(53863351-53863387)
[»] chr3 (70 HSPs)
chr3 (88-160)||(14964909-14964981)
chr3 (88-171)||(26724079-26724162)
chr3 (88-159)||(47891305-47891376)
chr3 (75-146)||(28813931-28814004)
chr3 (92-160)||(252126-252194)
chr3 (88-160)||(18020007-18020079)
chr3 (88-160)||(25848483-25848555)
chr3 (89-160)||(13902990-13903061)
chr3 (75-146)||(32186643-32186716)
chr3 (74-160)||(47069698-47069786)
chr3 (88-160)||(36667265-36667337)
chr3 (89-157)||(50332516-50332584)
chr3 (91-146)||(14624235-14624290)
chr3 (74-162)||(26724180-26724269)
chr3 (89-142)||(47069626-47069679)
chr3 (88-156)||(27768390-27768458)
chr3 (85-160)||(3169548-3169623)
chr3 (85-156)||(43650068-43650139)
chr3 (98-160)||(26976491-26976553)
chr3 (88-146)||(32186556-32186614)
chr3 (89-163)||(40209752-40209825)
chr3 (88-146)||(40209860-40209918)
chr3 (88-149)||(36900059-36900120)
chr3 (89-146)||(40286332-40286389)
chr3 (93-146)||(54343350-54343402)
chr3 (90-146)||(7607673-7607729)
chr3 (88-156)||(25848371-25848439)
chr3 (88-156)||(36667162-36667229)
chr3 (91-146)||(47573884-47573938)
chr3 (89-136)||(49364403-49364450)
chr3 (89-146)||(39714545-39714602)
chr3 (89-138)||(42866077-42866126)
chr3 (88-156)||(43650180-43650249)
chr3 (88-160)||(14624127-14624198)
chr3 (108-156)||(30955011-30955058)
chr3 (108-156)||(30970823-30970870)
chr3 (108-160)||(40286258-40286310)
chr3 (89-160)||(40286435-40286504)
chr3 (74-146)||(45131526-45131601)
chr3 (88-132)||(45131619-45131663)
chr3 (109-156)||(252070-252117)
chr3 (89-155)||(5442540-5442607)
chr3 (88-159)||(36374884-36374955)
chr3 (91-146)||(46337596-46337651)
chr3 (108-146)||(25848321-25848359)
chr3 (90-144)||(26976412-26976466)
chr3 (108-146)||(46337536-46337574)
chr3 (88-146)||(47891203-47891261)
chr3 (108-146)||(50332698-50332736)
chr3 (88-125)||(18019937-18019974)
chr3 (109-146)||(18020088-18020125)
chr3 (90-146)||(39541415-39541472)
chr3 (89-142)||(51833393-51833446)
chr3 (108-156)||(28814063-28814111)
chr3 (108-160)||(47069548-47069600)
chr3 (99-146)||(27658015-27658062)
chr3 (115-146)||(30954957-30954988)
chr3 (115-146)||(30970769-30970800)
chr3 (108-139)||(32186738-32186769)
chr3 (109-156)||(36900140-36900187)
chr3 (108-146)||(25848623-25848661)
chr3 (108-146)||(26724275-26724313)
chr3 (92-146)||(27768506-27768560)
chr3 (92-146)||(36374992-36375045)
chr3 (108-146)||(43650018-43650056)
chr3 (108-146)||(47891385-47891423)
chr3 (108-144)||(5442491-5442527)
chr3 (115-147)||(39714632-39714664)
chr3 (108-160)||(47573715-47573767)
chr3 (108-160)||(47891129-47891181)
[»] chr8 (42 HSPs)
chr8 (74-160)||(41151485-41151573)
chr8 (88-231)||(41151591-41151739)
chr8 (88-146)||(27127968-27128026)
chr8 (88-231)||(6220369-6220515)
chr8 (88-146)||(9400011-9400070)
chr8 (100-163)||(29427952-29428015)
chr8 (88-231)||(27128060-27128207)
chr8 (88-156)||(24827441-24827509)
chr8 (91-137)||(14550101-14550147)
chr8 (88-146)||(36053032-36053090)
chr8 (85-146)||(28618819-28618880)
chr8 (88-160)||(20209340-20209412)
chr8 (88-160)||(20209445-20209517)
chr8 (88-160)||(20229048-20229120)
chr8 (88-160)||(20229153-20229225)
chr8 (73-157)||(24909572-24909658)
chr8 (88-146)||(9399910-9399967)
chr8 (88-140)||(14895017-14895069)
chr8 (88-144)||(14895129-14895185)
chr8 (75-124)||(22813481-22813532)
chr8 (108-160)||(24909669-24909721)
chr8 (108-160)||(27052488-27052540)
chr8 (88-231)||(27052583-27052726)
chr8 (108-160)||(41151425-41151477)
chr8 (108-154)||(14550276-14550322)
chr8 (101-143)||(15563941-15563983)
chr8 (89-146)||(38414957-38415015)
chr8 (108-160)||(20209525-20209577)
chr8 (108-160)||(20229233-20229285)
chr8 (91-135)||(27855755-27855799)
chr8 (89-160)||(6220263-6220334)
chr8 (98-137)||(14550204-14550243)
chr8 (89-144)||(15564028-15564082)
chr8 (91-146)||(24793055-24793110)
chr8 (108-146)||(15563878-15563916)
chr8 (111-145)||(20209299-20209333)
chr8 (111-145)||(20229007-20229041)
chr8 (109-146)||(9399850-9399887)
chr8 (108-149)||(9400092-9400133)
chr8 (107-144)||(22813144-22813181)
chr8 (98-159)||(36052916-36052977)
chr8 (108-160)||(24827377-24827429)
[»] scaffold0018 (3 HSPs)
scaffold0018 (88-160)||(161590-161662)
scaffold0018 (106-231)||(161409-161538)
scaffold0018 (108-146)||(161670-161708)
[»] chr1 (29 HSPs)
chr1 (88-159)||(52913221-52913292)
chr1 (88-146)||(18608672-18608730)
chr1 (85-144)||(18981086-18981145)
chr1 (88-167)||(52913336-52913415)
chr1 (89-146)||(18608765-18608822)
chr1 (88-160)||(1173092-1173162)
chr1 (85-140)||(1173203-1173258)
chr1 (75-146)||(33650493-33650566)
chr1 (88-146)||(41007458-41007516)
chr1 (88-156)||(33650585-33650654)
chr1 (88-145)||(38698944-38699001)
chr1 (108-160)||(7489979-7490031)
chr1 (74-159)||(26879570-26879657)
chr1 (88-160)||(34173338-34173409)
chr1 (108-159)||(52913160-52913211)
chr1 (88-146)||(2633239-2633297)
chr1 (88-146)||(2633341-2633399)
chr1 (115-160)||(52913051-52913096)
chr1 (91-146)||(40892488-40892543)
chr1 (92-231)||(50727560-50727704)
chr1 (108-146)||(40892564-40892602)
chr1 (113-159)||(52913114-52913160)
chr1 (107-160)||(33650418-33650471)
chr1 (108-160)||(26879666-26879718)
chr1 (89-149)||(36956463-36956522)
chr1 (108-146)||(7489933-7489971)
chr1 (118-158)||(2633538-2633578)
chr1 (98-142)||(36956361-36956405)
chr1 (91-119)||(38699151-38699179)
[»] scaffold0279 (2 HSPs)
scaffold0279 (92-160)||(1124-1192)
scaffold0279 (108-160)||(1200-1252)
[»] scaffold0157 (3 HSPs)
scaffold0157 (88-240)||(21516-21672)
scaffold0157 (88-146)||(21705-21763)
scaffold0157 (109-146)||(21786-21823)
[»] scaffold0128 (2 HSPs)
scaffold0128 (99-156)||(2465-2522)
scaffold0128 (91-146)||(2580-2635)
[»] scaffold0002 (2 HSPs)
scaffold0002 (88-145)||(12143-12200)
scaffold0002 (196-247)||(12340-12391)
[»] scaffold0578 (1 HSPs)
scaffold0578 (107-146)||(2445-2484)
[»] scaffold1191 (1 HSPs)
scaffold1191 (83-132)||(1336-1385)


Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 31 - 249
Target Start/End: Complemental strand, 29019459 - 29019239
Alignment:
Q  31 tctcagccacgattaacaataattatgaagcaaattaactgaattttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtg 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||||    
T  29019459 tctcagccacgattaacaataattatgaagcaaattaactgaattttgattaacagaatgactaaattgaaaacgtttacaaacttaaaggacttatgtg 29019360  T
Q  129 tgaccaaaataacttaaacgactaatctgttagaagtcttaaaaggacttgtgtgcgactaaaatactaacttaaaaccaatctgttacaaacctcaaac 228  Q
    |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29019359 tgaccaaaataacttaaacgacaaatctattagaagtcttaaaaggacttgtgtgcgactaaaatactaacttaaaaccaatctgttacaaacctcaaac 29019260  T
Q  229 ttacatgactcctagtataat 249  Q
    ||| |||||||||| ||||||    
T  29019259 ttaaatgactcctaatataat 29019239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 4048395 - 4048481
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtcttaaa 171  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||| |||||||||||||||| ||  ||||||||| || |||||||    
T  4048395 aaagactaaatcgaaaatgtttacaaacttaaaggacttatgtgtaaccaaaataacttaaatgatcaatctgttacaaatcttaaa 4048481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 11975599 - 11975541
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  11975599 gactaaattgaaaacgtttaaaaacttaaaggacttatgtgtgaccacaataacttaaa 11975541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 6694718 - 6694787
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||| |||||    
T  6694718 taaatcgaaaacgtttataaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgtta 6694787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 27576520 - 27576588
Alignment:
Q  92 aaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||| ||||    
T  27576520 aaattgaaaacttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagtta 27576588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 30869570 - 30869657
Alignment:
Q  75 tttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||  |||||||||||||| |||||||||||||||||||||| | ||||  ||||||||||||| ||| |||||||||    
T  30869570 tttggttaacaaaaagactaaattgaaaatgtttacaaacttaaaggacttacgcgtgataaaaataacttaaaggaccaatctgtta 30869657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 6694697 - 6694625
Alignment:
Q  75 tttggttaaca--aagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||  ||||||||||||||||||||| |||||||||||||||||||||| | ||||||||||||||    
T  6694697 tttggttaacataaagactaaattgaaaacgtttgcaaacttaaaggacttatgtgt-aacaaaataacttaaa 6694625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 27280766 - 27280709
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaa 145  Q
    |||||||| |||||||||||||||||||||||||||| |||| |||||||||||||||    
T  27280766 gactaaatcgaaaacgtttacaaacttaaaggacttacgtgttaccaaaataacttaa 27280709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 29710489 - 29710577
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||| |  ||||||||||||||  |||||||||||||| |||||||||||||| ||||||||||||| ||| |||| ||||    
T  29710489 ttttggttaacataaggactaaattgaaaagttttacaaacttaaatgacttatgtgtgacgaaaataacttaaaggaccaatccgtta 29710577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 75 - 160
Target Start/End: Complemental strand, 4048369 - 4048282
Alignment:
Q  75 tttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||  ||||||||||||||||||||||||||| ||||| |||| ||||||||  |||||||||| ||| ||| |||||    
T  4048369 tttggttaacaaaatgactaaattgaaaacgtttacaaacttcaaggatttatatgtgaccattataacttaaaggaccaatatgtta 4048282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 40951782 - 40951724
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| |||| |||||||||||||||| |||||||||| |||||||||||||||||    
T  40951782 gactaaatcgaaagcgtttacaaacttaaatgacttatgtgcgaccaaaataacttaaa 40951724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 40951829 - 40951887
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| ||||| ||||||||||||||| || |||||||||||||||||||||||||    
T  40951829 gactaaatagaaaatgtttacaaacttaaatgatttatgtgtgaccaaaataacttaaa 40951887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 43258440 - 43258498
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||| |||||||||| ||||||||||||||||||||||| |||||||| |||||    
T  43258440 gactaaattaaaaacgtttaaaaacttaaaggacttatgtgtgatcaaaataatttaaa 43258498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 3198360 - 3198291
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||| |||||||||||| ||| ||||||||| ||||||||||||||||| ||| ||| |||||    
T  3198360 taaattgaaaatgtttacaaactttaagaacttatgtgggaccaaaataacttaaaagaccaatttgtta 3198291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 11975625 - 11975698
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaa-ggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||  |||||||||||||| ||||||||||||||| ||||||||||||| ||| |||| ||||    
T  11975625 gactaaattgaaaatatttacaaacttaaaaggacttatgtgtgacaaaaataacttaaaggaccaatcagtta 11975698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 42312911 - 42312764
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtct-----taaaaggacttgtgt 182  Q
    ||||||||||||||| |||||||| |||||||||||||||||||| |||||||  |||| ||| ||||| ||| || |||     | ||||||||| |||    
T  42312911 gactaaattgaaaacttttacaaatttaaaggacttatgtgtgacaaaaataaactaaatgaccaatctattacaaatctcaaacttaaaggacttatgt 42312812  T
Q  183 gcgactaaaatactaacttaaa--accaatctgttacaaacctcaaactta 231  Q
    | ||| ||||   |||||||||  |||||| | ||||||||||||||||||    
T  42312811 gtgaccaaaa---taacttaaatgaccaatatattacaaacctcaaactta 42312764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 43258399 - 43258338
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||| ||||| |||||||||||||||  ||||||||||||| |||||||||||||    
T  43258399 aaagactaaatcgaaaatgtttacaaacttaaaacacttatgtgtgacaaaaataacttaaa 43258338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 27576596 - 27576648
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||    
T  27576596 caaacttaaatgacttatgtgtgaccaaaataacttaaaggaccaatctgtta 27576648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 29710392 - 29710340
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||| |||||||||||||||||||| || ||||||||||    
T  29710392 caaacttaaaggacttatatgtgaccaaaataacttaaaggattaatctgtta 29710340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 30662227 - 30662175
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||| | |||||||||||||| |||||||||||||    
T  30662227 caaacttaaaggacttatgtgtaatcaaaataacttaaaagactaatctgtta 30662175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 31453047 - 31453099
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||||||||||||| |||||||||||||  ||||||||||||    
T  31453047 caaacttaaaggacttatgtgtgacaaaaataacttaaataactaatctgtta 31453099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 44293924 - 44293852
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||||| |||||||||||||||| | |||| ||||||||||||||||||||  || |||||||||    
T  44293924 gactaaatagaaaatgtttacaaacttaaagtatttatttgtgaccaaaataacttaaagaaccaatctgtta 44293852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 44293957 - 44294029
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||| || ||||| |||||||||||||||| |||||| |||||||||||||||||||| ||  |||||||||    
T  44293957 gactatatcgaaaatgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgtta 44294029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 241
Target Start/End: Complemental strand, 6222230 - 6222075
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtcttaa----aaggacttgtgtg 183  Q
    |||||||||||||||||| || || |||  || ||||||||||||||||||||||||||  |||||||||||| || | ||||    || ||||| ||||    
T  6222230 gactaaattgaaaacgttaacgaaattactgg-cttatgtgtgaccaaaataacttaaataactaatctgttacaaattttaaacttaaagacttatgtg 6222132  T
Q  184 cgactaaaatactaacttaaa--accaatctgttacaaacctcaaacttacatgactcct 241  Q
     ||||||||   |||||||||  |||||| | |||||||||| ||||||| | |||||||    
T  6222131 tgactaaaa---taacttaaaagaccaatatattacaaaccttaaacttaaaggactcct 6222075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 85 - 129
Target Start/End: Original strand, 3198404 - 3198448
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgt 129  Q
    |||||||||||||||||||||||||||| |||| |||||||||||    
T  3198404 aaagactaaattgaaaacgtttacaaacataaatgacttatgtgt 3198448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 91 - 139
Target Start/End: Complemental strand, 26978373 - 26978325
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaata 139  Q
    |||||||||||||| |||||||||||||||||| ||||| |||||||||    
T  26978373 taaattgaaaacgtctacaaacttaaaggacttgtgtgttaccaaaata 26978325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 41666329 - 41666401
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||||| |||||| ||||| |||||||||||||||| | |||||||||||  ||| |||||||||    
T  41666329 gactaaatcgaaaatgtttaccaactttaaggacttatgtgtgatcgaaataacttaagggacaaatctgtta 41666401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 27280874 - 27280912
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||| |||||||||||||||||||||||||||    
T  27280874 caaacttaaagtacttatgtgtgaccaaaataacttaaa 27280912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 42313056 - 42313094
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  42313056 caaatttaaaggacttatgtgtgaccaaaataacttaaa 42313094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 153
Target Start/End: Complemental strand, 22750388 - 22750343
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaa 153  Q
    |||| ||||| ||||||||||||||||||||||||||||| |||||    
T  22750388 caaaattaaatgacttatgtgtgaccaaaataacttaaacaactaa 22750343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 90 - 146
Target Start/End: Complemental strand, 22750466 - 22750410
Alignment:
Q  90 ctaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||| ||||||||||| || |||||| |||| ||||||| |||||    
T  22750466 ctaaattgaaaacgttcacaaacttaaaagatttatgtatgacaaaaataatttaaa 22750410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 29710585 - 29710637
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||| ||||||||||| ||||||||||| |||| ||| |||||||||    
T  29710585 caaacttaaatgacttatgtgttaccaaaataacctaaaagaccaatctgtta 29710637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 44294037 - 44294089
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||| |||| |||||||||||||||||||||| ||||| ||||||| |||||    
T  44294037 caaacgtaaaagacttatgtgtgaccaaaataatttaaaggactaatatgtta 44294089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 4048271 - 4048236
Alignment:
Q  111 acttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| |||||||||||||||||||||||||||    
T  4048271 acttaaagaacttatgtgtgaccaaaataacttaaa 4048236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 146
Target Start/End: Complemental strand, 6694604 - 6694565
Alignment:
Q  107 acaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||||| || ||||||||||||||    
T  6694604 acaaacttaaaggacttatgtgggaacaaaataacttaaa 6694565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 11975706 - 11975757
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtt 159  Q
    |||||||||||||||||| ||| || ||||||||||||| ||| ||||||||    
T  11975706 caaacttaaaggacttatctgttacaaaaataacttaaaggaccaatctgtt 11975757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 155
Target Start/End: Original strand, 30869665 - 30869712
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatc 155  Q
    ||||||||||| |||||||| |||||||||||||||||| ||| ||||    
T  30869665 caaacttaaagaacttatgtatgaccaaaataacttaaaggaccaatc 30869712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 6069262 - 6069304
Alignment:
Q  104 tttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||| |||||||| ||| ||||||||||||||    
T  6069262 tttacaaacttaaagaacttatgtttgatcaaaataacttaaa 6069304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 11975519 - 11975481
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||| | |||||||||||||    
T  11975519 caaacttaaaggacttatgtgtgtcaaaaataacttaaa 11975481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 112 - 146
Target Start/End: Original strand, 26185969 - 26186003
Alignment:
Q  112 cttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||||||| |||||    
T  26185969 cttaaaggacttatgtgtgaccaaaataatttaaa 26186003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 44293845 - 44293811
Alignment:
Q  111 acttaaaggacttatgtgtgaccaaaataacttaa 145  Q
    |||||||| ||||||||||||||||||||||||||    
T  44293845 acttaaagaacttatgtgtgaccaaaataacttaa 44293811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 27280815 - 27280852
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  27280815 aaacttcaaggacttatgtgttaccaaaataacttaaa 27280852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 85 - 154
Target Start/End: Complemental strand, 46713365 - 46713296
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaat 154  Q
    ||||| |||||  ||||||||| |||| ||||||||||||||||| |  ||||||| ||||| |||||||    
T  46713365 aaagaataaataaaaaacgtttgcaaatttaaaggacttatgtgttattaaaataatttaaatgactaat 46713296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 29710451 - 29710400
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||| ||||| ||||||||||||||||||||| ||| ||| |||||    
T  29710451 caaacttaaag-acttaagtgtgaccaaaataacttaaaggaccaatatgtta 29710400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 41666285 - 41666245
Alignment:
Q  99 aaacgtttacaaacttaaaggacttatgtgtgaccaaaata 139  Q
    |||||||||||||||||||  |||||||||| |||||||||    
T  41666285 aaacgtttacaaacttaaactacttatgtgtaaccaaaata 41666245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 46713282 - 46713235
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||||| |||||||| ||||||||||||||||||  ||||||||    
T  46713282 caaacttaaag-acttatgtatgaccaaaataacttaaataactaatct 46713235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 75 - 249
Target Start/End: Original strand, 25895086 - 25895266
Alignment:
Q  75 tttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtctta--- 169  Q
    |||||||||||||  |||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||| |   ||||||||| ||  ||||       
T  25895086 tttggttaacaaaaggactaaattgaaaacgtttacaaactgaaaggacttatgtgtgactaaaataacttaaaggttcaatctgttacaaaccttaaac 25895185  T
Q  170 --aaaggacttgtgtgcgactaaaatactaacttaaa--accaatctgttacaaacctcaaacttacatgactcctagtataat 249  Q
      ||||||||| |||| ||| ||||   |||||||||  ||||||||||||||||||||||||||| | |||||||||| ||||    
T  25895186 ttaaaggacttttgtgtgaccaaaa---taacttaaaggaccaatctgttacaaacctcaaacttaaaggactcctagtgtaat 25895266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 11791769 - 11791842
Alignment:
Q  75 tttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  11791769 tttggttaacaaaatgactaaattgaaaacgtttacaaacttataggacttatgtgtgaccaaaataacttaaa 11791842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 30265531 - 30265456
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaa 163  Q
    ||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||| ||||||||| ||||||    
T  30265531 gactaaattgaaaacgtttacaaacttaaagcacttatgtgtgacaaaaagaacttaaatgactaatctattagaa 30265456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 73 - 160
Target Start/End: Original strand, 36694482 - 36694571
Alignment:
Q  73 attttggttaaca--aagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||  |||||||||||||||   ||||||||||||||||||||||||||||||||||||| ||||| ||| |||||||||    
T  36694482 attttggttaacagaaagactaaattgaaattttttacaaacttaaaggacttatgtgtgaccaaaataatttaaaggaccaatctgtta 36694571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 31630217 - 31630145
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| ||  |||||||||    
T  31630217 gactaaatcgaaaacgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaaggatcaatctgtta 31630145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 9501057 - 9500999
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||    
T  9501057 gactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgactaaaataacttaaa 9500999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 31630246 - 31630318
Alignment:
Q  75 tttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||    
T  31630246 tttggttaacaaaatgactaaattgaaaacatttacaaacttaaag-acttatgtgtgaccaaaataacttaaa 31630318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 91 - 145
Target Start/End: Complemental strand, 4188711 - 4188657
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaa 145  Q
    ||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  4188711 taaattgaaaacgtttagaaacttaaaggacttgtgtgtgaccaaaataacttaa 4188657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 4188983 - 4189056
Alignment:
Q  75 tttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||  |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||    
T  4188983 tttggttaacaaaatgactaaattgaaaacgtttataaacttaatggacttatatgtgatcaaaataacttaaa 4189056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 12612552 - 12612470
Alignment:
Q  75 tttggttaaca-aagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||||| |||| |||||||||||| |||||||||||||| ||||||||||||| |||||||| ||||| ||| |||||    
T  12612552 tttggttaacagaagagtaaattgaaaacatttacaaacttaaatgacttatgtgtgatcaaaataatttaaaagaccaatct 12612470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 5009360 - 5009416
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||    
T  5009360 actaaattgaaaacgtttacaaacttaaagga-ttatgtgtgacaaaaataacttaaa 5009416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 33847619 - 33847691
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||| ||||| ||||||||||||||||| || ||||||||||| ||||| ||| |||||||||    
T  33847619 gactaaattgaaaatgtttaaaaacttaaaggacttatatgcgaccaaaataatttaaaggaccaatctgtta 33847691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 1316187 - 1316129
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||| ||| |||||||||||||||||||||||||||||| || ||||||||||||||    
T  1316187 gactaagttgcaaacgtttacaaacttaaaggacttatgtgcgatcaaaataacttaaa 1316129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 3876923 - 3876981
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||| ||| ||||||| || |||||||||||||||||||||||||||||||||    
T  3876923 gactaaattggaaaggtttacatacgtaaaggacttatgtgtgaccaaaataacttaaa 3876981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 4511996 - 4511942
Alignment:
Q  92 aaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||    
T  4511996 aaattgaaaatgtttacaaacttaaaggacttatatgtgatcaaaataacttaaa 4511942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 5009315 - 5009257
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||| ||||||||| |||| ||||||||||||| ||||||||||||||    
T  5009315 gactaaattgaaaacatttacaaacataaaagacttatgtgtgatcaaaataacttaaa 5009257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 36694465 - 36694394
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaa-ggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||  ||||||||||||    
T  36694465 gactaaattgaaaatatttacaaacttaaaaggacttatatgtgaccaaaataacttaaa--actaatctgtta 36694394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 146
Target Start/End: Original strand, 8035438 - 8035513
Alignment:
Q  73 attttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||| |  ||||||||| ||||||||||||||||||||  |||||||| | ||||||||||||||||    
T  8035438 attttggttaacataatgactaaattaaaaacgtttacaaacttaaaaaacttatgtataaccaaaataacttaaa 8035513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 25895057 - 25894985
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||  |||| ||||||||||||||||||||||| || ||||||||||||||||| ||| ||| |||||    
T  25895057 gactaaatcaaaaatgtttacaaacttaaaggacttatatgcgaccaaaataacttaaaggaccaatttgtta 25894985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 4511537 - 4511478
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgac 150  Q
    ||||| ||||| ||||||||||||||| ||||||||||| ||||||||||| ||||||||    
T  4511537 taaatcgaaaatgtttacaaacttaaatgacttatgtgtaaccaaaataacataaacgac 4511478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 14166374 - 14166432
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||| |||||||||||  |||||||||| ||| ||||||||||    
T  14166374 gactaaattgaaaacgtttaaaaacttaaagggtttatgtgtgaacaagataacttaaa 14166432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 29379888 - 29379950
Alignment:
Q  98 aaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||| |||||||| ||||||| ||||||||||||||||||||| ||||| ||||||| |||||    
T  29379888 aaaatgtttacaatcttaaagaacttatgtgtgaccaaaataatttaaaggactaatatgtta 29379950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 149
Target Start/End: Complemental strand, 1316107 - 1316066
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacga 149  Q
    ||||| ||||||||||||||||||||||||||||||||||||    
T  1316107 caaacataaaggacttatgtgtgaccaaaataacttaaacga 1316066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 44556676 - 44556619
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||| |  ||||||||||||||||||||||| |||||||| |||||    
T  44556676 actaaattgaaaacgtatgtaaacttaaaggacttatgtgtgatcaaaataagttaaa 44556619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 4511923 - 4511871
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataa 140  Q
    ||||||||| |||||||||||||||||||| |||||||||||||  |||||||    
T  4511923 gactaaattaaaaacgtttacaaacttaaaagacttatgtgtgattaaaataa 4511871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 9500977 - 9500925
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||| ||||||| ||||||||||||||||||||| ||| |||||||||    
T  9500977 caaacttaagggacttaagtgtgaccaaaataacttaaaggaccaatctgtta 9500925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 146
Target Start/End: Original strand, 43699435 - 43699482
Alignment:
Q  99 aaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| |||||||||||||| |||||||||||||||||||||| |||||    
T  43699435 aaacatttacaaacttaaaagacttatgtgtgaccaaaataaattaaa 43699482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 3876879 - 3876821
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| ||||||||||||||||||||||||| |||||||||||  | |||||||| ||||    
T  3876879 gacttaattgaaaacgtttacaaacttaaatgacttatgtgtagcaaaaataacataaa 3876821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 33847698 - 33847736
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  33847698 caaatttaaaggacttatgtgtgaccaaaataacttaaa 33847736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 36217208 - 36217246
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  36217208 caaacttaaaagacttatgtgtgaccaaaataacttaaa 36217246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 11791464 - 11791411
Alignment:
Q  93 aattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||| |||||||||||||||||||  ||||| ||||||||||||||| |||||    
T  11791464 aattggaaacgtttacaaacttaaataacttacgtgtgaccaaaataatttaaa 11791411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 39442418 - 39442474
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||| || || || || ||||||||||||||||||||||    
T  39442418 actaaattgaaaacgtttacaaa-ttcaaagatttgtgtgtgaccaaaataacttaaa 39442474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 98 - 146
Target Start/End: Original strand, 4512049 - 4512097
Alignment:
Q  98 aaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||||||||||| || || |||||||| |||||    
T  4512049 aaaacgtttacaaacttaaaggacttatatgggatcaaaataatttaaa 4512097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 39442306 - 39442254
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||| |||||||||||||| ||||||| |||||  ||||||||||||    
T  39442306 caaacttaaatgacttatgtgtgacaaaaataatttaaagtactaatctgtta 39442254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 44556597 - 44556549
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||||||||||||||||||| |||| |||||||| ||| |||||    
T  44556597 caaacttaaaggacttatgtgtgacaaaaaaaacttaaatgaccaatct 44556549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 146
Target Start/End: Complemental strand, 5009232 - 5009193
Alignment:
Q  107 acaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  5009232 acaaacttaaatgacttatgtgtgaacaaaataacttaaa 5009193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 104 - 151
Target Start/End: Complemental strand, 6694164 - 6694117
Alignment:
Q  104 tttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgact 151  Q
    |||||||||||||| || |||||||||| |||||||||||||| ||||    
T  6694164 tttacaaacttaaaagatttatgtgtgatcaaaataacttaaatgact 6694117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 122
Target Start/End: Complemental strand, 14166052 - 14166018
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggact 122  Q
    ||||||||||||||| |||||||||||||||||||    
T  14166052 gactaaattgaaaacatttacaaacttaaaggact 14166018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 31630339 - 31630377
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| ||||||||||| ||||||||||||||||||||||    
T  31630339 caaatttaaaggacttttgtgtgaccaaaataacttaaa 31630377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 140
Target Start/End: Complemental strand, 3876796 - 3876768
Alignment:
Q  112 cttaaaggacttatgtgtgaccaaaataa 140  Q
    |||||||||||||||||||||||||||||    
T  3876796 cttaaaggacttatgtgtgaccaaaataa 3876768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 12001792 - 12001836
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaa 135  Q
    ||||| ||||||||||||||| ||||| ||||| |||||||||||    
T  12001792 taaatcgaaaacgtttacaaatttaaaagacttgtgtgtgaccaa 12001836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 7e-30; HSPs: 66)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 74 - 231
Target Start/End: Complemental strand, 16327266 - 16327103
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtct---- 167  Q
    |||||||||||| |  |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||  ||        
T  16327266 ttttggttaacataaggactaaattgaaaacgtttacaaacttaaaggacttatgtgttaccaaaataacttaaacgaccaatctgttacaaacctcaaa 16327167  T
Q  168 -taaaaggacttgtgtgcgactaaaatactaacttaaa--accaatctgttacaaacctcaaactta 231  Q
     | ||||||||| |||||||||||||   |||||||||  | |||||| ||||||||||| ||||||    
T  16327166 cttaaaggacttatgtgcgactaaaa---taacttaaacgatcaatctattacaaacctctaactta 16327103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 1996297 - 1996226
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||    
T  1996297 aaagactaaattgaaaacgtttacaaacttataggacttatgtgtgaccaaaataacttaaaggactaatct 1996226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 28559384 - 28559315
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  28559384 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgtta 28559315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 7209939 - 7209882
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7209939 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 7209882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 16327284 - 16327356
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||| ||  |||||||||    
T  16327284 gactaaattgaaaacgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgtta 16327356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 28559421 - 28559493
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||| ||| |||||||||    
T  28559421 gactaaattgaaaacgtttataaacttaaaggacttatgtgtgactaaaataatttaaaggaccaatctgtta 28559493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 85 - 142
Target Start/End: Complemental strand, 35813443 - 35813386
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataact 142  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||    
T  35813443 aaagactatattgaaaacgtttacaaacttaaaggacttatgtgtgactaaaataact 35813386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 75 - 160
Target Start/End: Original strand, 5746277 - 5746364
Alignment:
Q  75 tttggttaaca--aagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||  ||||||||||| |||||||||||||||||||| ||||||||| |||||||||||| ||||| || |||| |||||    
T  5746277 tttggttaacagaaagactaaattaaaaacgtttacaaacttaaatgacttatgtatgaccaaaataatttaaaagattaatttgtta 5746364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 5746246 - 5746175
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||  |||||||||||||||||||||||||||||| | |||||||||||||||| ||| |||||||||    
T  5746246 actaaataaaaaacgtttacaaacttaaaggacttatgttttaccaaaataacttaaatgaccaatctgtta 5746175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 23662029 - 23661971
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  23662029 gactaaatttaaaacttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 23661971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 23796541 - 23796599
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  23796541 gactaaatttaaaacttttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 23796599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 10827290 - 10827362
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||||||||||||||||||||||||||| | |||||||||||||| ||||| ||  |||||||||    
T  10827290 gactaaatcgaaaacgtttacaaacttaaaggacttgtttgtgaccaaaataatttaaaggatcaatctgtta 10827362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 20928081 - 20928133
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  20928081 caaacttaaaggacttatgtgtgaccaaaataacttaaaggacaaatctgtta 20928133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 25456427 - 25456355
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| |||||| ||||| |||||||| ||||||| |||||||||||||||||||| ||| |||||||||    
T  25456427 gactaaatcgaaaacatttaccaacttaaaagacttatttgtgaccaaaataacttaaaggaccaatctgtta 25456355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 35461588 - 35461516
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| |||||| |||||||||||||||||||||| ||||| |||||||| ||||| ||| |||||||||    
T  35461588 gactaaatcgaaaacttttacaaacttaaaggacttatttgtgatcaaaataatttaaaggaccaatctgtta 35461516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 36759755 - 36759683
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||| ||||||||||||||||||||||  ||||||||||||| |||||  ||| ||||||||    
T  36759755 gactaaattgaaaacatttacaaacttaaaggacttataagtgaccaaaataatttaaagaacttatctgtta 36759683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 4943084 - 4943143
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaagga-cttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  4943084 gactaaattgaaaatgtttacaaacttaaaagaacttatgtgtgaccaaaataacttaaa 4943143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 17400730 - 17400804
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggactta--tgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||||| ||||||||||||  ||||||||||||| |||||| | ||| |||||||||    
T  17400730 gactaaattgaaaacgtttacaaatttaaaggacttatgtgtgtgaccaaaacaacttacaggaccaatctgtta 17400804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 7210250 - 7210308
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||| |||||||||||||||||||| ||||||||||  ||||||||||||||||    
T  7210250 gactaaatttaaaacgtttacaaacttaaatgacttatgtgcaaccaaaataacttaaa 7210308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 12774318 - 12774411
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaactt-aaaggac-ttatgtgtgaccaaaataacttaaacgactaatctgttagaa 163  Q
    |||||||||||| |  ||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||||||||| ||  ||| ||||||||    
T  12774318 ttttggttaacagaatgactaaattgaaaacgtttacaaacttaaaaggactttatgcgtgaccaaaataacttaaaagatcaatatgttagaa 12774411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 33491664 - 33491598
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaat 154  Q
    ||||||||||||||  |||||||| ||||||||||||| ||||| |||||||||||||| |||||||    
T  33491664 gactaaattgaaaatttttacaaagttaaaggacttatctgtgatcaaaataacttaaaggactaat 33491598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 36760783 - 36760841
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||| ||||||||||| ||| ||||||||||||||| ||||||||||||    
T  36760783 gactaaattgaaaatgtttacaaactaaaaagacttatgtgtgaccgaaataacttaaa 36760841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 37642946 - 37642888
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| |||||||||||||||||||||||| |||| || |||||||||||||||||    
T  37642946 gactaaatcgaaaacgtttacaaacttaaaggatttatttgagaccaaaataacttaaa 37642888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 85 - 143
Target Start/End: Original strand, 38682787 - 38682845
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataactt 143  Q
    ||||||||||| ||||| ||||||||||||||| ||||||||||| |||||||||||||    
T  38682787 aaagactaaatcgaaaatgtttacaaacttaaaagacttatgtgtaaccaaaataactt 38682845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 17400695 - 17400624
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||| ||| ||||||||||||||||| || ||||| |||||||| ||| ||| |||||    
T  17400695 actaaattgaaaacgtttgcaaccttaaaggacttatgtgagatcaaaagaacttaaaggaccaatttgtta 17400624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 23662047 - 23662121
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||  ||||||||||||||| ||||||||||| ||||| ||||||  ||| |||||||||||||    
T  23662047 ttttggttaacaaaaggactaaattgaaaacttttacaaacttgaaggagttatgtacgacaaaaataacttaaa 23662121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 35188049 - 35187994
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||| |||| ||||||||||||||| || |||||||||||||||||||||||||    
T  35188049 taaattaaaaatgtttacaaacttaaatgatttatgtgtgaccaaaataacttaaa 35187994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 4943050 - 4942992
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||| |||| ||||||||||||||||||||||||| ||| |||||||| |||||    
T  4943050 gactaaattaaaaatgtttacaaacttaaaggacttatgtatgatcaaaataatttaaa 4942992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 74 - 163
Target Start/End: Original strand, 12713054 - 12713147
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaactt-aaaggac-ttatgtgtgaccaaaataacttaaacgactaatctgttagaa 163  Q
    |||||||||||| |  ||||||||||||||||||||||||||| ||| ||| ||||| ||||||||||||||||||| ||  ||| ||||||||    
T  12713054 ttttggttaacagaatgactaaattgaaaacgtttacaaacttaaaaagactttatgcgtgaccaaaataacttaaaagatcaatatgttagaa 12713147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 20927997 - 20927939
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| ||||| ||||||||||||||| ||||||  ||||||||||||||||||||    
T  20927997 gactaaatcgaaaatgtttacaaacttaaaagacttacttgtgaccaaaataacttaaa 20927939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 37642979 - 37643037
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||| | |||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  37642979 gactaattcgaaaccgtttacaaacttaaaggacttatttgtgaccaaaataatttaaa 37643037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 12713152 - 12713197
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaa 153  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  12713152 caaacttaaaggacttatgtgtgacaaaaataacttaaatgactaa 12713197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 153
Target Start/End: Original strand, 12774416 - 12774461
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaa 153  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  12774416 caaacttaaaggacttatgtgtgacaaaaataacttaaatgactaa 12774461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 145
Target Start/End: Original strand, 33491682 - 33491754
Alignment:
Q  74 ttttggttaaca-aaga-ctaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaa 145  Q
    |||||||||||| |||| ||||||||||||||| ||| ||||||||| ||| ||||||||||||||||||||||    
T  33491682 ttttggttaacagaagaactaaattgaaaacgtctacgaacttaaag-actcatgtgtgaccaaaataacttaa 33491754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 35813485 - 35813542
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||| ||||||| |||||| ||||||||| ||| ||||||||||||||    
T  35813485 actaaattgaaaacatttacaatcttaaatgacttatgtatgagcaaaataacttaaa 35813542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 160
Target Start/End: Original strand, 35813566 - 35813615
Alignment:
Q  111 acttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||||||| ||||||||||||||||  ||||||||||||    
T  35813566 acttaaaggacttatgtgtaaccaaaataacttaaataactaatctgtta 35813615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 17400812 - 17400864
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||| |||||    
T  17400812 caaacttaaaggacttatgtgtgatcaaaataacttaaatgaccaatatgtta 17400864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 23661951 - 23661899
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||| |||||||||||||||| ||  |||||||||    
T  23661951 caaacttaaaggacttatgtgtaaccaaaataacttaaaagatcaatctgtta 23661899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 23796619 - 23796671
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||| |||||||||||||||| ||  |||||||||    
T  23796619 caaacttaaaggacttatgtgtaaccaaaataacttaaaagatcaatctgtta 23796671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 143
Target Start/End: Complemental strand, 14604137 - 14604102
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataactt 143  Q
    ||||||||||||||||||||||||||||||||||||    
T  14604137 caaacttaaaggacttatgtgtgaccaaaataactt 14604102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 28022136 - 28022191
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||| ||||| ||||||||| ||||||| |||||| |||||||||||||||||||    
T  28022136 taaatcgaaaatgtttacaaatttaaagggcttatgcgtgaccaaaataacttaaa 28022191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 158
Target Start/End: Original strand, 37032963 - 37033011
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgt 158  Q
    ||||||| |||||||||||||||||||||||||||||||  ||||||||||    
T  37032963 caaacttgaaggacttatgtgtgaccaaaataacttaaa--actaatctgt 37033011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 14604218 - 14604160
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||| ||  |||||||| ||||||||||||| ||||||||||||||| ||||    
T  14604218 gactaaattgataaaatttacaaatttaaaggacttatatgtgaccaaaataacataaa 14604160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 92 - 146
Target Start/End: Complemental strand, 20181489 - 20181435
Alignment:
Q  92 aaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||| |||||||||||||| ||||||| | ||||||||||||| ||||    
T  20181489 aaattgaaaacatttacaaacttaaatgacttatatttgaccaaaataacataaa 20181435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 35461508 - 35461470
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  35461508 caaacttacaggacttatgtgtgaccaaaataacttaaa 35461470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 103 - 156
Target Start/End: Original strand, 14604266 - 14604319
Alignment:
Q  103 gtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||||||| ||||| | ||||||||||||||||||||||||||| ||| |||||    
T  14604266 gtttacaatcttaacgaacttatgtgtgaccaaaataacttaaaggaccaatct 14604319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 145
Target Start/End: Complemental strand, 25456347 - 25456310
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaa 145  Q
    |||||||||||||||||||||||| |||||||||||||    
T  25456347 caaacttaaaggacttatgtgtgatcaaaataacttaa 25456310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 96 - 231
Target Start/End: Original strand, 35461629 - 35461768
Alignment:
Q  96 tgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtct-----taaaaggacttgtgtgcgactaa 190  Q
    ||||| |||||||||||||||| || |||| |||||| ||||||||||||| ||  ||||||||| || |||     | ||| ||||| |||| ||| ||    
T  35461629 tgaaagcgtttacaaacttaaaagagttatttgtgacaaaaataacttaaatgatcaatctgttacaaatctcaaaattaaatgacttatgtgtgaccaa 35461728  T
Q  191 aatactaacttaaa--accaatctgttacaaacctcaaactta 231  Q
    ||   |||||||||  |||||||| ||||||||||||||||||    
T  35461729 aa---taacttaaaggaccaatctattacaaacctcaaactta 35461768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 10827179 - 10827143
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataactta 144  Q
    |||||||||| ||||||||||||||||||||||||||    
T  10827179 caaacttaaaagacttatgtgtgaccaaaataactta 10827143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 10827257 - 10827187
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||  ||| |||||||||||||||||||| ||  |||||||||||||||||||| ||| |||||||||    
T  10827257 gactaaatctaaaccgtttacaaacttaaaggac-taaatgtgaccaaaataacttaaa-gaccaatctgtta 10827187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 92 - 151
Target Start/End: Complemental strand, 38680773 - 38680714
Alignment:
Q  92 aaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgact 151  Q
    |||||||||| ||||||||| |||||||| || ||| | |||||||||||||||| ||||    
T  38680773 aaattgaaaatgtttacaaatttaaaggatttttgtataaccaaaataacttaaatgact 38680714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 1996214 - 1996176
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  1996214 caaacttaaaggatttatatgtgaccaaaataacttaaa 1996176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 4943166 - 4943204
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  4943166 caaacttaaaggacttatgtgtgatcaaaataatttaaa 4943204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 5746167 - 5746129
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| |||||| |||||||||||||||||||||||||||    
T  5746167 caaatttaaagaacttatgtgtgaccaaaataacttaaa 5746129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 19550171 - 19550133
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  19550171 caaacttaaaagacttatgtgtcaccaaaataacttaaa 19550133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 23662144 - 23662182
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  23662144 caaacttaaagaacttatgtgtaaccaaaataacttaaa 23662182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 32361240 - 32361202
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  32361240 caaacttaaataacttatgtgtgaccaaaataacttaaa 32361202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 40980783 - 40980745
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||| |||||||||||| ||||||||||||||    
T  40980783 caaacttaaagtacttatgtgtgatcaaaataacttaaa 40980745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 4943234 - 4943275
Alignment:
Q  115 aaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||| ||||||||||||||||||||||||||| ||| |||||    
T  4943234 aaagaacttatgtgtgaccaaaataacttaaatgaccaatct 4943275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 12713036 - 12712995
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgt 129  Q
    ||||||||||||||| |||||||  |||||||||||||||||    
T  12713036 gactaaattgaaaacttttacaattttaaaggacttatgtgt 12712995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 88 - 129
Target Start/End: Complemental strand, 12774300 - 12774259
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgt 129  Q
    ||||||||||||||| |||||||  |||||||||||||||||    
T  12774300 gactaaattgaaaacttttacaattttaaaggacttatgtgt 12774259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 231
Target Start/End: Original strand, 25456470 - 25456606
Alignment:
Q  98 aaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtcttaaa-----aggacttgtgtgcgactaaaa 192  Q
    ||||| |||| ||||||||| || || | |||||||||||||||||||| ||| ||||| ||| ||  || |||     || | || |||| ||||||||    
T  25456470 aaaacttttaaaaacttaaaagaattctttgtgaccaaaataacttaaaggaccaatctattacaaacctcaaacttaaagtatttatgtgtgactaaaa 25456569  T
Q  193 tactaacttaaa-accaatctgttacaaacctcaaactta 231  Q
    ||   ||||||| |||||||||||||||||||||||||||    
T  25456570 ta---acttaaagaccaatctgttacaaacctcaaactta 25456606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 91 - 160
Target Start/End: Complemental strand, 32361317 - 32361248
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||| ||| |||  |||||  |||||||| |||||||||||||||||  ||||||| |||||    
T  32361317 taaattgaaaacattttcaactttaaataacttatgtatgaccaaaataacttaagggactaatttgtta 32361248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 28559501 - 28559553
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||| |||||||||||||||   |||| ||||||| |||||    
T  28559501 caaacttaaaggacttgtgtgtgaccaaaatactataaaggactaatttgtta 28559553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 146
Target Start/End: Complemental strand, 35812047 - 35811999
Alignment:
Q  98 aaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| |||||||||||||||| |||||| | |||||||||||| |||||    
T  35812047 aaaatgtttacaaacttaaagtacttatatatgaccaaaataatttaaa 35811999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 35812181 - 35812229
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||||||||| |||||||| ||||||||||||| ||||| ||| |||||    
T  35812181 caaacttaaatgacttatgcgtgaccaaaataatttaaaggaccaatct 35812229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 62; Significance: 7e-27; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 17137012 - 17136924
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||  |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  | ||||||||||    
T  17137012 ttttggttaacaaaaggactaaattgaaaacgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaagaattaatctgtta 17136924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 21598631 - 21598703
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||    
T  21598631 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgtta 21598703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 2761553 - 2761495
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  2761553 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgatcaaaataacttaaa 2761495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 17342626 - 17342684
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17342626 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccgaaataacttaaa 17342684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 231
Target Start/End: Complemental strand, 21598597 - 21598450
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtct-----taaaaggacttgtgt 182  Q
    |||||||| ||||||||||| |||||||||||||||||||| || |||||||||||||| ||| ||||||||| ||  ||     | ||||||||| |||    
T  21598597 gactaaatcgaaaacgtttataaacttaaaggacttatgtgggatcaaaataacttaaaggaccaatctgttacaaacctcaaacttaaaggacttatgt 21598498  T
Q  183 gcgactaaaatactaacttaaa--accaatctgttacaaacctcaaactta 231  Q
    || || ||||   |||||||||  |||||||||||| ||||||||||||||    
T  21598497 gcaaccaaaa---taacttaaaggaccaatctgttataaacctcaaactta 21598450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 9982822 - 9982750
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||||| ||| ||  |||||||||    
T  9982822 gactaaattgaaaacgtttacaaacttaaaagacttatgtgcgaccaaaataactcaaaggatcaatctgtta 9982750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 146
Target Start/End: Complemental strand, 17342609 - 17342534
Alignment:
Q  73 attttggttaac--aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||  || |||||||||||||||  ||||||||||||||||||||||||||||| ||||||||||||    
T  17342609 attttggttaacggaaggactaaattgaaaacacttacaaacttaaaggacttatgtgtgaccgaaataacttaaa 17342534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 24059817 - 24059745
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||  |||||||||    
T  24059817 gactagattaaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataatttaaatgatcaatctgtta 24059745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 13273252 - 13273323
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||| ||| |||||||||||| ||||||||||||| ||||||||||||| ||| |||||||||    
T  13273252 actaaattgaaaaagttcacaaacttaaagaacttatgtgtgacaaaaataacttaaatgaccaatctgtta 13273323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 2761587 - 2761645
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||    
T  2761587 gactaaattgaaaacgtttacaaacttaaaggatttatgtgtgatcaaaataacctaaa 2761645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 90 - 160
Target Start/End: Complemental strand, 35225548 - 35225478
Alignment:
Q  90 ctaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||| |||||||||||||||||||||| |||||||||||| || ||||||||||| ||| |||||||||    
T  35225548 ctaaatcgaaaacgtttacaaacttaaagaacttatgtgtgatcagaataacttaaaggaccaatctgtta 35225478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 91 - 160
Target Start/End: Original strand, 10356450 - 10356519
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||  ||||||||||||||||||||||||||| | ||||||||||||| ||| |||||||||    
T  10356450 taaattgaaaagttttacaaacttaaaggacttatgtgtggcaaaaataacttaaaagaccaatctgtta 10356519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 35050688 - 35050620
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||||||| ||||||||||| ||||||||| || ||||||||||| ||||||||||||| |||||||||    
T  35050688 gactaaatcgaaaacgtttataaacttaaaagatttatgtgtgacaaaaataacttaaaggactaatct 35050620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 9982840 - 9982927
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||| |  |||||||||||||| |||||||||||||||||||||||||| ||| |||| |||||||| ||| ||| |||||    
T  9982840 ttttggttaacagaaggactaaattgaaaa-gtttacaaacttaaaggacttatgtgagacaaaaagaacttaaaggaccaatatgtta 9982927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 10356333 - 10356281
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||| |||||    
T  10356333 caaacttaaaggacttatgtgtgaccaaaataatttaaaggactaatttgtta 10356281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 13273218 - 13273163
Alignment:
Q  87 agactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataact 142  Q
    ||||||||||||||| |||||||||||||||  ||||||||| |||||||||||||    
T  13273218 agactaaattgaaaatgtttacaaacttaaataacttatgtgggaccaaaataact 13273163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 104 - 146
Target Start/End: Original strand, 364199 - 364241
Alignment:
Q  104 tttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||| ||||||||||||||||||||||||||||    
T  364199 tttacaaacttaaaagacttatgtgtgaccaaaataacttaaa 364241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 35225594 - 35225648
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataact 142  Q
    |||||||||||| ||||||||||||||| |||| ||||||||||| |||||||||    
T  35225594 gactaaattgaatacgtttacaaacttataggaattatgtgtgacaaaaataact 35225648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 9982936 - 9982973
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||||||||||||||||    
T  9982936 aaacttaaaggacttatgtgtgaccaaaataacttaaa 9982973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 21598710 - 21598763
Alignment:
Q  107 acaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||| || |||||||||||||| ||| |||||||||    
T  21598710 acaaacttaaaggacttatgtgagaacaaaataacttaaaggaccaatctgtta 21598763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 10356393 - 10356341
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||||| |||||||||||||||||||||  || |||||||||    
T  10356393 caaacttaaaggacttaagtgtgaccaaaataacttaaagaaccaatctgtta 10356341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 10356527 - 10356579
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||| ||||||||||| |||| ||| |||||||||    
T  10356527 caaacttaaaggacttatgtgttaccaaaataacctaaaggaccaatctgtta 10356579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 17136916 - 17136868
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||||||||| |||||||||| ||||||||||||||||| |||||||||    
T  17136916 caaacttaaatgacttatgtgagaccaaaataacttaaaggactaatct 17136868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 95 - 146
Target Start/End: Complemental strand, 364130 - 364079
Alignment:
Q  95 ttgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||| |||||||||||||||| |||||| ||||||||||| ||||||||    
T  364130 ttgaaaatgtttacaaacttaaagaacttatttgtgaccaaaacaacttaaa 364079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 3848655 - 3848582
Alignment:
Q  75 tttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||  ||||||||||||| ||||||||||||||||||  |||| ||| | |||| |||||||||    
T  3848655 tttggttaacaaaaggactaaattgaaaccgtttacaaacttaaaggtattatatgtaagcaaactaacttaaa 3848582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 19557904 - 19557956
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||| |||||||||||||||||||||  ||||| ||| |||||||||    
T  19557904 caaacttaaaagacttatgtgtgaccaaaatattttaaaggaccaatctgtta 19557956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 35050731 - 35050783
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||| |||||||||||| | |||||||||||| ||| |||||||||    
T  35050731 caaacttaaagaacttatgtgtgatcgaaataacttaaaggaccaatctgtta 35050783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 35225469 - 35225418
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||| |||||| |||||||||||||||||| ||| ||| |||||    
T  35225469 aaacttaaaggatttatgtatgaccaaaataacttaaaggaccaatttgtta 35225418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 9982742 - 9982704
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||||||| |||||||| |||||    
T  9982742 caaacttaaaggacttatgtgtgatcaaaataatttaaa 9982704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 31091318 - 31091261
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||||||| |||||  | |||||| ||| ||||||||||||||    
T  31091318 gactaaattgaaaacgtttacaaatttaaa-aatttatgtttgatcaaaataacttaaa 31091261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 35050847 - 35050884
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  35050847 aaacttaaaggacttatgcgtgacctaaataacttaaa 35050884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 13812336 - 13812284
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataa 140  Q
    |||||||| |||||| |||||||| ||||| ||||||||||| | ||||||||    
T  13812336 gactaaatcgaaaacatttacaaatttaaatgacttatgtgttaacaaaataa 13812284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 62)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 45038361 - 45038433
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  45038361 gactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatctgtta 45038433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 53863485 - 53863397
Alignment:
Q  74 ttttggttaaca--aagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||  ||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||||||    
T  53863485 ttttggttaacataaagactaaattgaaatcttttacaaacttaaaggacttatgtgtgactaaaataacttaaaggaccaatctgtta 53863397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 41083239 - 41083311
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||| ||| |||||||||    
T  41083239 gactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgaccgaaataacttaaaagaccaatctgtta 41083311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 17232079 - 17232008
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||| ||||||||    
T  17232079 actaaattgaaaacgtttacaaacttaaaagacttatgtgtgatcaaaataacttaaaagacttatctgtta 17232008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 51950622 - 51950564
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  51950622 gactaaattgaaaacatttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 51950564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 40395284 - 40395356
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||  |||||||||||| |||||||||||||    
T  40395284 gactaaatcgaaaacgtttacaaatttaaaggacttatgtgtgacagaaataacttaaaggactaatctgtta 40395356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 12592331 - 12592259
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||||||||| | || ||||||||||||||||||||||||| ||  |||||||||    
T  12592331 gactaaattgaaaacgtttacaaacttacaagatttatgtgtgaccaaaataacttaaatgatcaatctgtta 12592259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 41083206 - 41083134
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||  ||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||| |||||    
T  41083206 gactaaatttgaaacgtttacaaacttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgtta 41083134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 53863503 - 53863575
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||| ||| ||| |||||    
T  53863503 gactaaattgaaaacttttacaaacttaaaggacttatgcatgaccaaaataacttaaaggaccaatttgtta 53863575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 156
Target Start/End: Original strand, 24369246 - 24369317
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||||| |||||| ||||||||||||||||||||| ||||||| ||||||||||||| ||| |||||    
T  24369246 aaagactaaatcgaaaacatttacaaacttaaaggacttaggtgtgactaaaataacttaaaggacaaatct 24369317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 154
Target Start/End: Complemental strand, 24684197 - 24684134
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaat 154  Q
    ||||||||||||||||||||||||||| || |||||||| |||||||||||||||| |||||||    
T  24684197 taaattgaaaacgtttacaaacttaaaagatttatgtgtaaccaaaataacttaaatgactaat 24684134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 163
Target Start/End: Complemental strand, 41519308 - 41519218
Alignment:
Q  75 tttggttaaca--aagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaa 163  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||||||||| | |||| ||||||||||| | ||| ||||| ||||||    
T  41519308 tttggttaacataaagaccaaattgaaaacgtttacaaacttaaaggacttatttttgactaaaataacttagatgacaaatctattagaa 41519218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 2788051 - 2787979
Alignment:
Q  75 tttggttaaca--aagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||  |||||||| |||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  2788051 tttggttaacagaaagactaa-ttgaaaacatttacaaacttaaatgacttatgtgtgaccaaaataacttaaa 2787979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 24684230 - 24684291
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||  ||||||||||||    
T  24684230 aaagactaaatcgaaaacgtttataaacttaaaggacttatgtgtgactgaaataacttaaa 24684291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 26782460 - 26782373
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||| |  ||||||||||||||  |||||||||||||| |||||| ||||||||||||||||||||| ||| |||||||||    
T  26782460 ttttggttaacataaggactaaattgaaaatttttacaaacttaaaagactta-gtgtgaccaaaataacttaaaggaccaatctgtta 26782373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 40395247 - 40395179
Alignment:
Q  92 aaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||| ||||||||||||| || |||||||||||||||||||||||||  |||||| |||||    
T  40395247 aaattgaaaacgcttacaaacttaaaagatttatgtgtgaccaaaataacttaaagaactaatatgtta 40395179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 9999476 - 9999547
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||| |||||||| ||||| ||||||| |||||| ||||||||||||| ||| |||||||||    
T  9999476 actaaattgaaaacttttacaaagttaaatgacttatatgtgacaaaaataacttaaatgaccaatctgtta 9999547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 12498772 - 12498714
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||    
T  12498772 gactaaattgaaattttttacaaacttaaaggatttatgtgtgaccaaaataacttaaa 12498714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 240
Target Start/End: Original strand, 12498805 - 12498961
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtct-----taaaaggacttgtgt 182  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||| |||||| ||||| || || ||||||| || |||     | ||||||||| |||    
T  12498805 gactaaatcgaaaacgtttacaaatttaaaagacttatgtgtgaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaaggacttatgt 12498904  T
Q  183 gcgactaaaatactaacttaaa--accaatctgttacaaacctcaaacttacatgactcc 240  Q
    | || |||||   |||||||||  | |||||| |||||||||||||||||| | ||||||    
T  12498905 gtgattaaaa---taacttaaatgatcaatctattacaaacctcaaacttaaaggactcc 12498961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 26782478 - 26782536
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||| |||||||||||||| ||||||| |||||| |||||||||||||    
T  26782478 gactaaattgaaaacttttacaaacttaaaagacttatatgtgacaaaaataacttaaa 26782536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 41519347 - 41519409
Alignment:
Q  98 aaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||| ||||||||||||||| |||||||||||||| ||||| ||||||| |||||||||||||    
T  41519347 aaaatgtttacaaacttaaaagacttatgtgtgactaaaatgacttaaatgactaatctgtta 41519409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 45787219 - 45787277
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||| ||||||||||  |||||||||||| ||||||||||||||    
T  45787219 gactaaattgaaaacgtttgcaaacttaaaaaacttatgtgtgatcaaaataacttaaa 45787277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 51950666 - 51950724
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||| ||||||||||||||||||||||||| | |||||| |||||||||    
T  51950666 gactaaattgaaaatgtttacaaacttaaaggacttatgtataaccaaattaacttaaa 51950724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 146
Target Start/End: Complemental strand, 9999444 - 9999383
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||| |||||| ||||||||||||||||||||| | |||||||||||||| ||||||||||    
T  9999444 aaagattaaattcaaaacgtttacaaacttaaagaatttatgtgtgaccaatataacttaaa 9999383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 7246123 - 7246072
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||| |||||    
T  7246123 aaacttaaaggacttatgtgtaaccaaaataacttaaacgaccaatttgtta 7246072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 55617537 - 55617607
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtt 159  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||| ||| ||| ||||    
T  55617537 gactaaattgaaaacatttacaaacttaaa-cacttatgtgtgactaaaataacttaaaagacaaatatgtt 55617607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 55624841 - 55624911
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtt 159  Q
    ||||||||||||||| ||||||||||||||  ||||||||||||| ||||||||||||| ||| ||| ||||    
T  55624841 gactaaattgaaaacatttacaaacttaaa-cacttatgtgtgactaaaataacttaaaagacaaatatgtt 55624911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 12592375 - 12592433
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| |||||| |||||||||||||| ||||||||| ||||||| ||||||||||    
T  12592375 gactaaatcgaaaacttttacaaacttaaaagacttatgtatgaccaatataacttaaa 12592433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 7246209 - 7246261
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataa 140  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||  |||||||    
T  7246209 gactaaattgaaaacttttacaaacttaaagtacttatgtgtgataaaaataa 7246261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 7246289 - 7246341
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||| |||||||||||||||||| ||| ||| |||||    
T  7246289 caaacttaaaggacttatgtatgaccaaaataacttaaaagaccaatatgtta 7246341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 40147024 - 40146976
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||| ||||||||||||||||||||||||||||||| ||| |||||    
T  40147024 caaacttcaaggacttatgtgtgaccaaaataacttaaatgacaaatct 40146976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 45038318 - 45038266
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||||||| |||||||||||  ||| |||||||||    
T  45038318 caaacttaaaggacttatgtgtgaccgaaataacttaacggaccaatctgtta 45038266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 231
Target Start/End: Original strand, 24684283 - 24684318
Alignment:
Q  196 taacttaaaaccaatctgttacaaacctcaaactta 231  Q
    ||||||||||||||||||||||||||||||||||||    
T  24684283 taacttaaaaccaatctgttacaaacctcaaactta 24684318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 2469971 - 2469933
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  2469971 caaacttaaaggacttaggtgtgaccaaaataacttaaa 2469933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 7246064 - 7246026
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  7246064 caaacttaaaggacttatgtctgaccaaaataacttaaa 7246026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 11884688 - 11884650
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||| |||||||||||||    
T  11884688 caaacttaaaggacttatgtgtgacaaaaataacttaaa 11884650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 21322035 - 21322073
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  21322035 caaacttaaaggacttatatgtgaccaaaataacttaaa 21322073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 91 - 141
Target Start/End: Complemental strand, 40147100 - 40147050
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataac 141  Q
    |||| ||||||| ||||||| ||||||||||| ||||||||||||||||||    
T  40147100 taaactgaaaacatttacaaccttaaaggactcatgtgtgaccaaaataac 40147050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 40147147 - 40147205
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| ||||| ||||||||| ||||||||||||| |||||  |||||||||||||    
T  40147147 gactaaatcgaaaatgtttacaaatttaaaggacttatatgtgagaaaaataacttaaa 40147205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 46196182 - 46196144
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  46196182 caaacttaaaggacttatttgtgaccaaaataacttaaa 46196144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 2788160 - 2788197
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||| |||||||||||||||||||||||||    
T  2788160 aaacttaaaggatttatgtgtgaccaaaataacttaaa 2788197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 99 - 160
Target Start/End: Original strand, 11884811 - 11884872
Alignment:
Q  99 aaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||| ||||||||||||||| |||||| |||||||||| ||| ||||| ||| |||||||||    
T  11884811 aaacatttacaaacttaaagaacttatttgtgaccaaattaatttaaaggaccaatctgtta 11884872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 151
Target Start/End: Complemental strand, 17236840 - 17236803
Alignment:
Q  114 taaaggacttatgtgtgaccaaaataacttaaacgact 151  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  17236840 taaaggacttatgtgtgaccaaaataacttaaatgact 17236803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 25056035 - 25055978
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaa 145  Q
    |||||||| |||||| |||||| ||||||||| | |||||||||| ||||||||||||    
T  25056035 gactaaatggaaaacatttacatacttaaaggtcatatgtgtgacaaaaataacttaa 25055978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 25056079 - 25056135
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaa 145  Q
    |||||||||||||||||||||||||||||| ||||||  | ||||||||| |||||||    
T  25056079 gactaaattgaaaacgtttacaaacttaaatgactta-atatgaccaaaagaacttaa 25056135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 115 - 156
Target Start/End: Original strand, 53863591 - 53863632
Alignment:
Q  115 aaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||||||||||||||||| ||||||||||||||||| |||||    
T  53863591 aaaggacttatgtgtgactaaaataacttaaacgaccaatct 53863632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 2470173 - 2470221
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||| ||||||||||||| |||||||||||||||||||| ||| |||||    
T  2470173 caaatttaaaggacttatatgtgaccaaaataacttaaaggaccaatct 2470221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 11884768 - 11884696
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||||| |||||||||||||||| |||||  |||||| ||||||| || || ||| |||||||||    
T  11884768 gactaaatcgaaaatgtttacaaacttaaagaacttagttgtgactaaaataaattgaaggaccaatctgtta 11884696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Complemental strand, 25055953 - 25055905
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||||||| |||||||| |||||||||||||||| ||| |||||    
T  25055953 caaacttaaaggatttatgtgtcaccaaaataacttaaaggacaaatct 25055905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 41083319 - 41083371
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||| ||| ||| |||||||||||||||||||| ||| |||||||||    
T  41083319 caaacttaaatgacatatatgtgaccaaaataacttaaaggaccaatctgtta 41083371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 45038441 - 45038489
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||||||||||||||||| |||||| ||||||||||||| ||| |||||    
T  45038441 caaacttaaaggacttatttgtgacaaaaataacttaaatgaccaatct 45038489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 46196383 - 46196435
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||| |||| ||||||||||| | |||| ||||||||    
T  46196383 caaacttaaaggacttatgtatgacaaaaataacttacatgacttatctgtta 46196435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 12697154 - 12697115
Alignment:
Q  108 caaacttaaaggacttatgt-gtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  12697154 caaacttaaaggacttatgtggtgaccaaaataacttaaa 12697115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 2470093 - 2470151
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| | ||| || |||| ||| ||| ||||||||||||||||||||||||||||    
T  2470093 gactaaatcggaaaggtatacatactaaaaagacttatgtgtgaccaaaataacttaaa 2470151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 158
Target Start/End: Complemental strand, 40395171 - 40395121
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgt 158  Q
    |||||||||||||||||| |||||| |||||||| |||| ||| |||||||    
T  40395171 caaacttaaaggacttatatgtgacaaaaataacctaaaggaccaatctgt 40395121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 41083126 - 41083088
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  41083126 caaacttaaaggacttatatgtgacaaaaataacttaaa 41083088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 44057328 - 44057366
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  44057328 caaacttaaatgacttatgtgtaaccaaaataacttaaa 44057366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 50290403 - 50290441
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||  |||||||||||||||||||||||||||    
T  50290403 caaacttaaaaaacttatgtgtgaccaaaataacttaaa 50290441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 12498691 - 12498654
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  12498691 aaacttaaaagacttatgtgtgacaaaaataacttaaa 12498654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 2470049 - 2470002
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaa 136  Q
    |||||||| ||||| ||||||||||||||| ||||||| ||||||||||    
T  2470049 gactaaatcgaaaaggtttacaaacttaaa-gacttatatgtgaccaaa 2470002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 50290223 - 50290179
Alignment:
Q  196 taacttaaaaccaatctgttacaaacctcaaacttacatgactcc 240  Q
    ||||||||||||||| ||| |||||||||||||||| | ||||||    
T  50290223 taacttaaaaccaatttgtaacaaacctcaaacttaaaggactcc 50290179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 146
Target Start/End: Complemental strand, 53863387 - 53863351
Alignment:
Q  110 aacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  53863387 aacttaaatgacttatgtgtgatcaaaataacttaaa 53863351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 70)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 14964981 - 14964909
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  14964981 gactaaattgaaaacctttacaaacttaaaggacttatgtgtgaccaaaataacttaaatgaccaatctgtta 14964909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 171
Target Start/End: Complemental strand, 26724162 - 26724079
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtcttaaa 171  Q
    ||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||| ||||||||| ||| || |||||||    
T  26724162 gactaaattgaaaacttttataaacttaaaggacttatatgtgaccaaaataacttaaatgactaatcttttacaaatcttaaa 26724079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 159
Target Start/End: Original strand, 47891305 - 47891376
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtt 159  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| ||| ||||    
T  47891305 gactaaattgaaaacgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaaggaccaatatgtt 47891376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 28814004 - 28813931
Alignment:
Q  75 tttggttaaca--aagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||  || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  28814004 tttggttaacataaatactaaattgaaaacgtttacaaacttgaaggacttatgtgtgaccaaaataacttaaa 28813931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 92 - 160
Target Start/End: Complemental strand, 252194 - 252126
Alignment:
Q  92 aaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||||||||||| |||| ||||||||    
T  252194 aaatcgaaaacgtttacaaacttaaaggacttatttgtgaccaaaataacttaaaagactgatctgtta 252126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 18020007 - 18020079
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||| |||| |||||||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  18020007 gactaaattgaaaaggtttgcaaacttaaaagacttatgtgtaaccaaaataacttaaacgaccaatctgtta 18020079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 25848483 - 25848555
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||| ||| ||| |||||    
T  25848483 gactaaattgaaaacatttacaaacttaaaggacatatgtgtgaccaaaataacttaaaggaccaatgtgtta 25848555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 13902990 - 13903061
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||| ||||||| |||||    
T  13902990 actaaattgaaaacgtttacaaatttaaaggacttatatgtaaccaaaataacttaaaagactaatatgtta 13903061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 32186643 - 32186716
Alignment:
Q  75 tttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||  ||||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||    
T  32186643 tttggttaacaaaaagactaaattgaaaacgtttacaaacttaaagaatttatgtgtaaccaaaataacttaaa 32186716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 160
Target Start/End: Original strand, 47069698 - 47069786
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||| |  |||||||||||||||||||||||||||||||||||||| |||||| ||| | ||||||| ||| |||||||||    
T  47069698 ttttggttaacataatgactaaattgaaaacgtttacaaacttaaaggacttatatgtgacgaaattcacttaaatgaccaatctgtta 47069786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 36667265 - 36667337
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||  ||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||    
T  36667265 gactaaatcgactacgtttacaaacttaaaagacttatgtgtgaccaaaataacttaaaggacaaatctgtta 36667337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 89 - 157
Target Start/End: Complemental strand, 50332584 - 50332516
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctg 157  Q
    ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||| ||| ||||||    
T  50332584 actaaattgaaaacgtttacaaacttaaatgacttatatgtgatcaaaataacttaaaggaccaatctg 50332516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 14624235 - 14624290
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  14624235 taaattgaaaacgtttacaaacttaaaagacttatgtgtgaccagaataacttaaa 14624290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 74 - 162
Target Start/End: Original strand, 26724180 - 26724269
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaactt-aaaggacttatgtgtgaccaaaataacttaaacgactaatctgttaga 162  Q
    ||||||||||||||  |||||||||||||||||||| |||||| |||| |||| ||| ||||||||||||||||||  ||||||||||||||    
T  26724180 ttttggttaacaaaaggactaaattgaaaacgtttataaacttaaaagaacttgtgtatgaccaaaataacttaaa--actaatctgttaga 26724269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 47069679 - 47069626
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataact 142  Q
    |||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  47069679 actaaattgaaaacgtttacgaactcaaaggacttatgtgtgaccaaaataact 47069626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 27768458 - 27768390
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| |||| || ||||||    
T  27768458 gactaaatttaaaacgtttacaaacttaaaggatttatgtgtgatcaaaataacataaatgattaatct 27768390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 160
Target Start/End: Complemental strand, 3169623 - 3169548
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||| |||||||||||||| ||| | ||| |||||||||||||||||| ||| ||| |||||    
T  3169623 aaagactaaattgaaaacatttacaaacttaaaagacctgtgtatgaccaaaataacttaaaggaccaatatgtta 3169548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 156
Target Start/End: Complemental strand, 43650139 - 43650068
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||||| ||||| ||||||||||||||| || |||||||||| |||||||||||||| ||| |||||    
T  43650139 aaagactaaatcgaaaatgtttacaaacttaaaagatttatgtgtgatcaaaataacttaaatgaccaatct 43650068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 98 - 160
Target Start/End: Original strand, 26976491 - 26976553
Alignment:
Q  98 aaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||| |||| || |||||    
T  26976491 aaaacatttacaaacttaaatgacttatgtgtgaccaaaataacttaaaggacttatatgtta 26976553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 32186614 - 32186556
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| ||||||||||| ||||||||||||||||||||| || |||||||||||||    
T  32186614 gactaaatcgaaaacgtttaaaaacttaaaggacttatgtgttacaaaaataacttaaa 32186556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 89 - 163
Target Start/End: Complemental strand, 40209825 - 40209752
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaa 163  Q
    ||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||| ||  ||||| ||||||    
T  40209825 actaaattgaaaacgtttacaaacttaaa-gacttatgtgtgaacaaaacaacttaaaagatcaatctattagaa 40209752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 40209860 - 40209918
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||| ||| |||||||||| ||||||||||||||||||||| ||||||    
T  40209860 gactaaattgaaaacttttgcaaacttaaacgacttatgtgtgaccaaaatatcttaaa 40209918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 149
Target Start/End: Original strand, 36900059 - 36900120
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacga 149  Q
    |||||||||||||| |||||||||||||||||| ||||||| ||  ||||||||||||||||    
T  36900059 gactaaattgaaaatgtttacaaacttaaaggatttatgtgagattaaaataacttaaacga 36900120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 40286389 - 40286332
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||| |||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  40286389 actaaatcgaaaatatttacaaacttaaaggacttctgtgtgaccaaaataacttaaa 40286332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 54343402 - 54343350
Alignment:
Q  93 aattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  54343402 aattgaaaacgtttacaaacttaaagg-cttatatgtgaccaaaataacttaaa 54343350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 7607673 - 7607729
Alignment:
Q  90 ctaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||| ||||||||||| ||||||||| |||||||| |||||||||||||||||||    
T  7607673 ctaaatggaaaacgtttagaaacttaaaagacttatgcgtgaccaaaataacttaaa 7607729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 25848439 - 25848371
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||||||| | ||||||||||||||||||| || || |||||||||||||||||||||  |||||||||    
T  25848439 gactaaatcgcaaacgtttacaaacttaaaagatttttgtgtgaccaaaataacttaacggactaatct 25848371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 36667229 - 36667162
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||||||||||||||||||  |||| || ||||||||||||||||||||||||  |||||||||    
T  36667229 gactaaattgaaaacgtttacaaatctaaaaga-ttatgtgtgaccaaaataacttaagagactaatct 36667162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 47573884 - 47573938
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  47573884 taaattgaaaacgtttacgaacttaaa-gacttatatgtgaccaaaataacttaaa 47573938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 89 - 136
Target Start/End: Original strand, 49364403 - 49364450
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaa 136  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  49364403 actaaattgaaaacgtttacaaacttaaatgacatatgtgtgaccaaa 49364450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 39714545 - 39714602
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||| ||| ||||||||||| | |||||||| |||||    
T  39714545 actaaattgaaaacgtttacaaactcaaatgacttatgtgtaatcaaaataatttaaa 39714602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 138
Target Start/End: Original strand, 42866077 - 42866126
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaat 138  Q
    |||||||| ||||| ||||||||||| |||||||||||||||||||||||    
T  42866077 actaaattaaaaacttttacaaacttgaaggacttatgtgtgaccaaaat 42866126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 43650180 - 43650249
Alignment:
Q  88 gactaaattgaaaacgtttacaaa-cttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||||| |||||||  |||||||| |||||||||||||||||| |||||||||||||||| |||| ||||    
T  43650180 gactaagttgaaaagatttacaaatcttaaaggacttatgtgttaccaaaataacttaaaggactcatct 43650249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 14624198 - 14624127
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||  |||||| ||||||| ||||||||||||||||||| |||||||| |  ||||||||||    
T  14624198 gactaaattgaaaatatttacagacttaaatgacttatgtgtgaccaaaa-aacttaaatgtttaatctgtta 14624127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 30955011 - 30955058
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  30955011 caaacataaaggacttatgtgtgaccaaaataacttaaac-actaatct 30955058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 30970823 - 30970870
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||| |||||||||||||||||||||||||||||||||| ||||||||    
T  30970823 caaacataaaggacttatgtgtgaccaaaataacttaaac-actaatct 30970870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 40286310 - 40286258
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||||| ||||||||||| || ||||||| |||||    
T  40286310 caaacttaaaggacttatgtgtgatcaaaataacttgaaggactaatttgtta 40286258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 89 - 160
Target Start/End: Original strand, 40286435 - 40286504
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||| |||||||||||||||| |||||  |||||| ||||||||| ||| ||| |||||||||    
T  40286435 actaaattgaaaatgtttacaaacttaaagaactta--tgtgactaaaataactcaaaagaccaatctgtta 40286504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 74 - 146
Target Start/End: Complemental strand, 45131601 - 45131526
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaacttaaa-ggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||| |  |||||| |||||||| |||||||||||||| ||||||||||||||| |||||||| ||||    
T  45131601 ttttggttaacagaatgactaagttgaaaacatttacaaacttaaaaggacttatgtgtgacaaaaataacataaa 45131526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 132
Target Start/End: Original strand, 45131619 - 45131663
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgac 132  Q
    |||||||||||||| |||||||||||||||||||| |||||||||    
T  45131619 gactaaattgaaaatgtttacaaacttaaaggactaatgtgtgac 45131663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 156
Target Start/End: Complemental strand, 252117 - 252070
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||||||||||||||| ||||||||||||||||||||| ||| |||||    
T  252117 aaacttaaaggacttacgtgtgaccaaaataacttaaatgaccaatct 252070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 89 - 155
Target Start/End: Complemental strand, 5442607 - 5442540
Alignment:
Q  89 actaaattgaaaacgtttacaaactt-aaaggacttatgtgtgaccaaaataacttaaacgactaatc 155  Q
    |||||||||||||| |||||||| || ||| ||||||| |||||||||||||||||||| ||| ||||    
T  5442607 actaaattgaaaacatttacaaattttaaaagacttatctgtgaccaaaataacttaaaggacgaatc 5442540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 36374955 - 36374884
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtt 159  Q
    |||||||| |||||| |||||||| |||||||| |||| |||||||||||| | ||||| ||||||| ||||    
T  36374955 gactaaatcgaaaacttttacaaatttaaaggatttatttgtgaccaaaattatttaaaggactaatttgtt 36374884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 46337651 - 46337596
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||| |||||  ||||||||||||||||| |||| ||||||||||||||||||||    
T  46337651 taaatcgaaaatttttacaaacttaaaggatttatctgtgaccaaaataacttaaa 46337596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 25848359 - 25848321
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  25848359 caaacttaaaggacttgtgtgtgaccaaaataacttaaa 25848321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 90 - 144
Target Start/End: Complemental strand, 26976466 - 26976412
Alignment:
Q  90 ctaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataactta 144  Q
    |||||||||||||| ||||||||||||| || || ||||| ||||||||||||||    
T  26976466 ctaaattgaaaacgattacaaacttaaaagatttttgtgtaaccaaaataactta 26976412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 46337574 - 46337536
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  46337574 caaacttaaaggacttatgtgtgaccaaaataatttaaa 46337536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 47891261 - 47891203
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| |||||| |||||||||||||| |||| || || |||||||||||||||||    
T  47891261 gactaaatcgaaaacatttacaaacttaaaagactaatatgcgaccaaaataacttaaa 47891203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 50332698 - 50332736
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  50332698 caaacttaaaggacttatgtgtaaccaaaataacttaaa 50332736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 88 - 125
Target Start/End: Complemental strand, 18019974 - 18019937
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttat 125  Q
    ||||||||||||| ||||||||||||||||||||||||    
T  18019974 gactaaattgaaagcgtttacaaacttaaaggacttat 18019937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 18020088 - 18020125
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  18020088 aaacttaaaggacttatgtttgaccaaaataacttaaa 18020125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 90 - 146
Target Start/End: Original strand, 39541415 - 39541472
Alignment:
Q  90 ctaaattgaaaacgtttacaaacttaaa-ggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||| |||||  |||||||||||||| |||||||| ||||||||||||||||||||    
T  39541415 ctaaatcgaaaatatttacaaacttaaaaggacttatatgtgaccaaaataacttaaa 39541472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 51833393 - 51833446
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataact 142  Q
    |||||||||| ||| ||||||| |||||| ||||||||| ||||||||||||||    
T  51833393 actaaattgataacatttacaatcttaaatgacttatgtatgaccaaaataact 51833446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 28814063 - 28814111
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||||| |||||||| ||| |||||||||||||| |||||||||    
T  28814063 caaacttaaagaacttatgtctgatcaaaataacttaaaagactaatct 28814111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 47069600 - 47069548
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||| |||||||||||| |||||||||||||| ||| ||| |||||    
T  47069600 caaacttaaagaacttatgtgtgatcaaaataacttaaaggaccaatatgtta 47069548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 27658062 - 27658015
Alignment:
Q  99 aaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||| || |||||||||||  ||||||||||||    
T  27658062 aaacgtttacaaacttaaatgatttatgtgtgactgaaataacttaaa 27658015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 30954957 - 30954988
Alignment:
Q  115 aaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||||||||||    
T  30954957 aaaggacttatgtgtgaccaaaataacttaaa 30954988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 115 - 146
Target Start/End: Original strand, 30970769 - 30970800
Alignment:
Q  115 aaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||||||||||    
T  30970769 aaaggacttatgtgtgaccaaaataacttaaa 30970800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 139
Target Start/End: Original strand, 32186738 - 32186769
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaata 139  Q
    ||||||||||||||||||||||||||||||||    
T  32186738 caaacttaaaggacttatgtgtgaccaaaata 32186769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 109 - 156
Target Start/End: Original strand, 36900140 - 36900187
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||||||| ||||||| |||||||||||||||| ||| |||||    
T  36900140 aaacttaaaggacctatgtgtaaccaaaataacttaaaggaccaatct 36900187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 25848623 - 25848661
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||| |||||||||||||| ||||||||||||||||    
T  25848623 caaactttaaggacttatgtgttaccaaaataacttaaa 25848661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 26724275 - 26724313
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| |||||||||||||||||||| |||||||||||||    
T  26724275 caaatttaaaggacttatgtgtgacgaaaataacttaaa 26724313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 27768506 - 27768560
Alignment:
Q  92 aaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| ||||| ||||||||||||||| ||||| ||| ||| ||||||||||||||    
T  27768506 aaatcgaaaatgtttacaaacttaaatgacttttgtatgatcaaaataacttaaa 27768560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 92 - 146
Target Start/End: Original strand, 36374992 - 36375045
Alignment:
Q  92 aaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| |||||||||||||||||||||  |||||| |||||||||||||| |||||    
T  36374992 aaatcgaaaacgtttacaaacttaaa-aacttatttgtgaccaaaataatttaaa 36375045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 43650056 - 43650018
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||| ||||||||||| |||||||||||||    
T  43650056 caaacttaaaggatttatgtgtgacgaaaataacttaaa 43650018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 47891385 - 47891423
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||| ||||||||||||||||| ||||||||||||||    
T  47891385 caaactcaaaggacttatgtgtgatcaaaataacttaaa 47891423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 144
Target Start/End: Complemental strand, 5442527 - 5442491
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataactta 144  Q
    ||||||||||||| |||| ||||||||||||||||||    
T  5442527 caaacttaaaggagttatatgtgaccaaaataactta 5442491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 147
Target Start/End: Original strand, 39714632 - 39714664
Alignment:
Q  115 aaaggacttatgtgtgaccaaaataacttaaac 147  Q
    |||||| ||||||||||||||||||||||||||    
T  39714632 aaaggatttatgtgtgaccaaaataacttaaac 39714664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 47573767 - 47573715
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||| |||||||||||||  ||||||| ||||| ||||||| |||||    
T  47573767 caaacttaaaagacttatgtgtgataaaaataatttaaaggactaatatgtta 47573715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 47891181 - 47891129
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||| |||||| ||||||||||||||| ||||| ||  |||||||||    
T  47891181 caaacttaaatgacttaggtgtgaccaaaataatttaaaagatcaatctgtta 47891129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 160
Target Start/End: Complemental strand, 41151573 - 41151485
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||| |  ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||| ||| |||||||||    
T  41151573 ttttggttaacagaaggactaaattgaaaacatttacaaacataaaggacttatgtgtgaccaaaataacttaaaggaccaatctgtta 41151485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 41151591 - 41151739
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaa------gtcttaaaaggacttgtg 181  Q
    ||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| ||| ||||||||| ||        ||||||||||||| ||    
T  41151591 gactaaattcaaaccgtttacaaacttaaaggacttatgtgtgaccaaaagaacttaaaggaccaatctgttacaaaccacgaacttaaaaggacttatg 41151690  T
Q  182 tgcgactaaaatactaacttaaa--accaatctgttacaaacctcaaactta 231  Q
    || ||| ||||   |||||||||  || ||||||||||||||||||||||||    
T  41151691 tgtgaccaaaa---taacttaaaggactaatctgttacaaacctcaaactta 41151739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 27128026 - 27127968
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27128026 gactaaattgaaaacatttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 27127968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 6220369 - 6220515
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtct-----taaaaggacttgtgt 182  Q
    |||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||  || ||||||||| || |||     | |||| |||| |||    
T  6220369 gactaaattgaaaacgttta-aaacttaaaggacttatgtgtgaccacaataacttaaagtaccaatctgttacaaatctcaaacttaaagaacttatgt 6220467  T
Q  183 gcgactaaaatactaacttaa--aaccaatctgttacaaacctcaaactta 231  Q
    | ||| ||||   ||||||||  ||||||| ||||||||||||||||||||    
T  6220468 gtgacaaaaa---taacttaaagaaccaatttgttacaaacctcaaactta 6220515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 9400011 - 9400070
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaa-ggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||    
T  9400011 gactaaattgaaaaggtttacaaacttaaaaggacttatgtgtgaccaaaataacttaaa 9400070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 100 - 163
Target Start/End: Original strand, 29427952 - 29428015
Alignment:
Q  100 aacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaa 163  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||    
T  29427952 aacgtgtacaaacttaaaggacttatgtatgaccaaaataacttaaaagaccaatctgttagaa 29428015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 27128060 - 27128207
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataactt-aaacgactaatctgttagaagtctta-----aaaggacttgtg 181  Q
    |||||||||||||||||||||| ||| |||  |||||||||||||||||||||||| ||| ||  ||| ||||||||  ||||     ||||||||||||    
T  27128060 gactaaattgaaaacgtttacagactgaaaaaacttatgtgtgaccaaaataacttaaaaagatcaatttgttagaaaccttaaacttaaaggacttgtg 27128159  T
Q  182 tgcgactaaaatactaacttaaaaccaatctgttacaaacctcaaactta 231  Q
    || ||  ||||||  | || ||||||||||| ||||||||||||||||||    
T  27128160 tgtgatcaaaata--acctaaaaaccaatctattacaaacctcaaactta 27128207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 24827509 - 24827441
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||| ||||||||||||| ||| |||||    
T  24827509 gactaaatcgaaaacgtttacaaatttaaaagacttatgtgtgactaaaataacttaaatgacaaatct 24827441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 137
Target Start/End: Complemental strand, 14550147 - 14550101
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaa 137  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  14550147 taaattgaaaacgtttacaaacttaaaggacttatgtgtaaccaaaa 14550101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 36053032 - 36053090
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||||| |||||||||||||    
T  36053032 gactagattgaaaacttttacaaacttaaagaacttatgtgtgactaaaataacttaaa 36053090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 85 - 146
Target Start/End: Original strand, 28618819 - 28618880
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||| |||||||||||||||||||||||||||  | |||| ||||||||||||||||||||    
T  28618819 aaagaataaattgaaaacgtttacaaacttaaaaaatttatttgtgaccaaaataacttaaa 28618880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 20209412 - 20209340
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||||| |||||||||||||||| | |||| ||||||||||||||||||||  || |||||||||    
T  20209412 gactaaatagaaaatgtttacaaacttaaagtatttatttgtgaccaaaataacttaaagaaccaatctgtta 20209340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 20209445 - 20209517
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||| || ||||| |||||||||||||||| |||||| |||||||||||||||||||| ||  |||||||||    
T  20209445 gactatatcgaaaatgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgtta 20209517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 20229120 - 20229048
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||||| |||||||||||||||| | |||| ||||||||||||||||||||  || |||||||||    
T  20229120 gactaaatagaaaatgtttacaaacttaaagtatttatttgtgaccaaaataacttaaagaaccaatctgtta 20229048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 20229153 - 20229225
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||| || ||||| |||||||||||||||| |||||| |||||||||||||||||||| ||  |||||||||    
T  20229153 gactatatcgaaaatgtttacaaacttaaagtacttatttgtgaccaaaataacttaaaggatcaatctgtta 20229225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 73 - 157
Target Start/End: Original strand, 24909572 - 24909658
Alignment:
Q  73 attttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctg 157  Q
    ||||||||||||| |  ||||||||||||    ||||||||||||||||||||||| ||||||||||||| ||||| ||| ||||||    
T  24909572 attttggttaacagaaggactaaattgaatttttttacaaacttaaaggacttatgcgtgaccaaaataatttaaaggaccaatctg 24909658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 9399967 - 9399910
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||| |||||||| |||||| | ||||||||||||||||||||||||||    
T  9399967 gactaaattgaaaatgtttacaatcttaaaag-cttatgtgtgaccaaaataacttaaa 9399910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 14895017 - 14895069
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataa 140  Q
    |||||||||||||||||||||||| ||||| || ||||||||| |||||||||    
T  14895017 gactaaattgaaaacgtttacaaatttaaaagatttatgtgtggccaaaataa 14895069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 144
Target Start/End: Original strand, 14895129 - 14895185
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataactta 144  Q
    ||||||||||||||||||||||||||||||||| |||| |||  |||| ||||||||    
T  14895129 gactaaattgaaaacgtttacaaacttaaaggatttatatgtagccaatataactta 14895185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 75 - 124
Target Start/End: Original strand, 22813481 - 22813532
Alignment:
Q  75 tttggttaac--aaagactaaattgaaaacgtttacaaacttaaaggactta 124  Q
    ||||||||||  ||| ||||||||||||||||||||||||||||||||||||    
T  22813481 tttggttaacctaaaaactaaattgaaaacgtttacaaacttaaaggactta 22813532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 24909669 - 24909721
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||| |||||    
T  24909669 caaacttaaaggacttatgtgtgatcaaaataacttaaaggaccaatttgtta 24909721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 27052540 - 27052488
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||||||| |||||||||||| ||| ||| |||||    
T  27052540 caaacttaaaggacttatgtgtgaccgaaataacttaaaggaccaatgtgtta 27052488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 88 - 231
Target Start/End: Original strand, 27052583 - 27052726
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtct-----taaaaggacttgtgt 182  Q
    |||||||| ||||| |||||||||||||||    |||||||||| |||||||||||||| ||| ||||||||| ||  ||     | ||||||||| |||    
T  27052583 gactaaatcgaaaaagtttacaaacttaaa----ttatgtgtgatcaaaataacttaaaggaccaatctgttataaacctcaaacttaaaggacttatgt 27052678  T
Q  183 gcgactaaaatactaacttaa--aaccaatctgttacaaacctcaaactta 231  Q
    ||||| ||||   ||||||||  || |||||| ||||||||||||||||||    
T  27052679 gcgacaaaaa---taacttaaagaatcaatctattacaaacctcaaactta 27052726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 41151477 - 41151425
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||||||||| |||||||||||||| ||| ||| |||||    
T  41151477 caaacttaaaggacttatgtgtgatcaaaataacttaaaggaccaatatgtta 41151425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 154
Target Start/End: Original strand, 14550276 - 14550322
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaat 154  Q
    |||||||||| ||||||||| |||||||||||||||||| |||||||    
T  14550276 caaacttaaaagacttatgtatgaccaaaataacttaaaggactaat 14550322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 101 - 143
Target Start/End: Complemental strand, 15563983 - 15563941
Alignment:
Q  101 acgtttacaaacttaaaggacttatgtgtgaccaaaataactt 143  Q
    ||||||| ||||||||||||||||||| |||||||||||||||    
T  15563983 acgtttagaaacttaaaggacttatgtatgaccaaaataactt 15563941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 89 - 146
Target Start/End: Complemental strand, 38415015 - 38414957
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaagga-cttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||| |||||||| ||||||||  |||| ||||||||||||||||||||    
T  38415015 actaaattgaaaacatttacaaatttaaaggattttatatgtgaccaaaataacttaaa 38414957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 20209525 - 20209577
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||| |||| |||||||||||||||||||||| ||||| ||||||| |||||    
T  20209525 caaacgtaaaagacttatgtgtgaccaaaataatttaaaggactaatatgtta 20209577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 20229233 - 20229285
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||| |||| |||||||||||||||||||||| ||||| ||||||| |||||    
T  20229233 caaacgtaaaagacttatgtgtgaccaaaataatttaaaggactaatatgtta 20229285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 135
Target Start/End: Original strand, 27855755 - 27855799
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaa 135  Q
    ||||||||||||||||||||||| ||| ||| |||||||||||||    
T  27855755 taaattgaaaacgtttacaaactcaaatgacatatgtgtgaccaa 27855799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 160
Target Start/End: Complemental strand, 6220334 - 6220263
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||| |||||||  | ||| |||||||||||||| ||||| ||||||| ||| |||| ||||    
T  6220334 actaaattgaaaacatttacaacttaaaaagacttatgtgtgacaaaaattacttaaatgaccaatcagtta 6220263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 98 - 137
Target Start/End: Original strand, 14550204 - 14550243
Alignment:
Q  98 aaaacgtttacaaacttaaaggacttatgtgtgaccaaaa 137  Q
    |||| ||||||||||||||| |||||||||||||||||||    
T  14550204 aaaatgtttacaaacttaaatgacttatgtgtgaccaaaa 14550243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 15564028 - 15564082
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataactta 144  Q
    |||||||| |||||||| ||||| ||||||||||||||||| || |||||||||||    
T  15564028 actaaattaaaaacgtt-acaaatttaaaggacttatgtgtaacaaaaataactta 15564082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 24793110 - 24793055
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||  |||||||| |||||| |||||||||| |||||||||| |||||    
T  24793110 taaattgaaaatttttacaaatttaaagtacttatgtgtaaccaaaataatttaaa 24793055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 15563916 - 15563878
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  15563916 caaacttaaaagacttatgtgtgactaaaataacttaaa 15563878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 20209333 - 20209299
Alignment:
Q  111 acttaaaggacttatgtgtgaccaaaataacttaa 145  Q
    |||||||| ||||||||||||||||||||||||||    
T  20209333 acttaaagaacttatgtgtgaccaaaataacttaa 20209299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 145
Target Start/End: Complemental strand, 20229041 - 20229007
Alignment:
Q  111 acttaaaggacttatgtgtgaccaaaataacttaa 145  Q
    |||||||| ||||||||||||||||||||||||||    
T  20229041 acttaaagaacttatgtgtgaccaaaataacttaa 20229007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 146
Target Start/End: Complemental strand, 9399887 - 9399850
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  9399887 aaacttaaaggacttacgtgtgaccaaagtaacttaaa 9399850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 149
Target Start/End: Original strand, 9400092 - 9400133
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacga 149  Q
    |||||| |||| | ||||||||||||||||||||||||||||    
T  9400092 caaactcaaagaatttatgtgtgaccaaaataacttaaacga 9400133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 107 - 144
Target Start/End: Complemental strand, 22813181 - 22813144
Alignment:
Q  107 acaaacttaaaggacttatgtgtgaccaaaataactta 144  Q
    ||||||||||| ||||||||||||| ||||||||||||    
T  22813181 acaaacttaaatgacttatgtgtgatcaaaataactta 22813144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 98 - 159
Target Start/End: Complemental strand, 36052977 - 36052916
Alignment:
Q  98 aaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtt 159  Q
    |||| |||||||||||||||  ||||| |||||||||||||||| |||| ||  ||||||||    
T  36052977 aaaatgtttacaaacttaaacaacttacgtgtgaccaaaataacataaatgatcaatctgtt 36052916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 24827429 - 24827377
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||||||||||  ||||| ||| |||||||||| ||| |||||||||    
T  24827429 caaacttaaaggacttagttgtgatcaatataacttaaatgaccaatctgtta 24827377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 57; Significance: 7e-24; HSPs: 3)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 88 - 160
Target Start/End: Original strand, 161590 - 161662
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||    
T  161590 gactaaattgaaaacttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatctgtta 161662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 106 - 231
Target Start/End: Complemental strand, 161538 - 161409
Alignment:
Q  106 tacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtct-----taaaaggacttgtgtgcgactaaaatactaact 200  Q
    ||||||||||||||||||||||||||| ||||||| ||||| ||| ||||||||| || |||     | ||||||||| |||| ||| ||||   ||| |    
T  161538 tacaaacttaaaggacttatgtgtgacaaaaataagttaaaggaccaatctgttacaaatctcaaacttaaaggacttatgtgtgaccaaaa---taagt 161442  T
Q  201 taaa--accaatctgttacaaacctcaaactta 231  Q
    ||||  |||||||||||||||||||||||||||    
T  161441 taaaggaccaatctgttacaaacctcaaactta 161409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 161670 - 161708
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  161670 caaatttaaaggacttatgtgtgaccaaaataacttaaa 161708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 7e-21; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 88 - 159
Target Start/End: Complemental strand, 52913292 - 52913221
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtt 159  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||| ||| ||||||||    
T  52913292 gactaaatcgaaaacgtttacaaacttaaaggacttatgtgtgactagaataacttaaaggaccaatctgtt 52913221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 18608730 - 18608672
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  18608730 gactaaattgaaaacatttacaaacttaaaggacttaagtgtgaccaaaataacttaaa 18608672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 85 - 144
Target Start/End: Complemental strand, 18981145 - 18981086
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataactta 144  Q
    |||||| |||| ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  18981145 aaagacgaaatcgaaaatgtttacaaacttaaaggacttatgtgtgaccaaaataactta 18981086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 88 - 167
Target Start/End: Original strand, 52913336 - 52913415
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtct 167  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||| |||  |||||| | ||| ||||||    
T  52913336 gactaaatagaaaacgtttacaaacttaaaggacttatgtgtgatcaaaataactcaaagaactaatttattacaagtct 52913415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 146
Target Start/End: Original strand, 18608765 - 18608822
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||    
T  18608765 actaaattgaaaacgtttacaaacttaaaggacttatctatgatcaaaataacttaaa 18608822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 1173162 - 1173092
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||||| |||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  1173162 gactaaatcgaaaatgtttacaaacttaaag-acttatgtgtgaccaaaataacttaaa-aactaatctgtta 1173092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 140
Target Start/End: Original strand, 1173203 - 1173258
Alignment:
Q  85 aaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataa 140  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||| |||||||    
T  1173203 aaagactaaattgaaaacgttcacaaactcaaaggacttatgtgtgacaaaaataa 1173258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 33650566 - 33650493
Alignment:
Q  75 tttggttaaca--aagactaaattgaaaacgtttac-aaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||  ||||||||||||||| ||||||| |||||||||||||||| |||||||||||||||||||||    
T  33650566 tttggttaacataaagactaaattgaaa-cgtttaccaaacttaaaggacttacgtgtgaccaaaataacttaaa 33650493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 41007458 - 41007516
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||| ||| |||||    
T  41007458 gactaaattgaaaacgtttacaaacttaaaagacttatatgtgaccaaattaatttaaa 41007516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 33650585 - 33650654
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaa-ggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    ||||||||  |||||||||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||    
T  33650585 gactaaatcaaaaacgtttacaaacttaaaaggacttatgtgagaccaaaataacttaaaggaccaatct 33650654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 38699001 - 38698944
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaa 145  Q
    |||||||||||||||||||||||| ||||| ||||  |||||||||||||||||||||    
T  38699001 gactaaattgaaaacgtttacaaatttaaaagactcgtgtgtgaccaaaataacttaa 38698944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 7490031 - 7489979
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||||| ||||||||||||||||||||||||| || ||||||||||    
T  7490031 caaacttaaaggatttatgtgtgaccaaaataacttaaatgattaatctgtta 7489979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 159
Target Start/End: Original strand, 26879570 - 26879657
Alignment:
Q  74 ttttggttaacaaa--gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtt 159  Q
    |||||||||||| |  |||||||||||||||||||| ||| ||||||||| ||| ||||| |||||||||||||| ||  ||||||||    
T  26879570 ttttggttaacataatgactaaattgaaaacgtttaaaaatttaaaggacatatatgtgatcaaaataacttaaaggatcaatctgtt 26879657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 160
Target Start/End: Complemental strand, 34173409 - 34173338
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||| ||||||||| ||||| ||||||||||||| ||| |||||||||||||||| ||| |||||||||    
T  34173409 gactaaatcgaaaacgtt-acaaatttaaaggacttatttgtaaccaaaataacttaaaggaccaatctgtta 34173338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 159
Target Start/End: Complemental strand, 52913211 - 52913160
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtt 159  Q
    ||||||||||||||||||||||||||||||||||||||| ||| ||| ||||    
T  52913211 caaacttaaaggacttatgtgtgaccaaaataacttaaaggaccaatatgtt 52913160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 146
Target Start/End: Complemental strand, 2633297 - 2633239
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||| ||||| ||||||||||||||| || |||||||| ||||||||||||||||    
T  2633297 gactaaatcgaaaatgtttacaaacttaaatgatttatgtgtaaccaaaataacttaaa 2633239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 2633341 - 2633399
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||| |||| ||||||||| |||||||||||||| ||||| |||||||||||||    
T  2633341 gactaaattaaaaatgtttacaaatttaaaggacttatgcgtgacaaaaataacttaaa 2633399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 160
Target Start/End: Complemental strand, 52913096 - 52913051
Alignment:
Q  115 aaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||| ||||||||||||||||||||||||| |||||||||||||    
T  52913096 aaaggatttatgtgtgaccaaaataacttaaaggactaatctgtta 52913051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 40892488 - 40892543
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||| ||||| ||| ||||||||||||| | ||||||||||||    
T  40892488 taaattgaaaacgtttaaaaactcaaatgacttatgtgtgatcgaaataacttaaa 40892543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 92 - 231
Target Start/End: Original strand, 50727560 - 50727704
Alignment:
Q  92 aaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtc------ttaaaaggacttgtgtgcg 185  Q
    |||||||||  ||||||||| |||||||| |  |||||||| ||||||||||||| ||| ||||||||| ||  |      |||||||||||| ||||||    
T  50727560 aaattgaaagggtttacaaatttaaaggattcgtgtgtgactaaaataacttaaaagacaaatctgttacaaaccttaaatttaaaaggacttatgtgcg 50727659  T
Q  186 actaaaatactaacttaaa--accaatctgttacaaacctcaaactta 231  Q
    |||||||   |||||||||  || ||| ||||| ||||||||||||||    
T  50727660 actaaaa---taacttaaatgacaaatttgttagaaacctcaaactta 50727704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 146
Target Start/End: Original strand, 40892564 - 40892602
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||| ||||||||||||||||||||||||||||||||||    
T  40892564 caaatttaaaggacttatgtgtgaccaaaataacttaaa 40892602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 159
Target Start/End: Complemental strand, 52913160 - 52913114
Alignment:
Q  113 ttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtt 159  Q
    |||||||||||||||||||||| ||||||||||| ||| ||||||||    
T  52913160 ttaaaggacttatgtgtgaccagaataacttaaatgaccaatctgtt 52913114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 33650471 - 33650418
Alignment:
Q  107 acaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||| |||||||||| || |||||||||||||| ||| |||||||||    
T  33650471 acaaacttaaatgacttatgtgggaacaaaataacttaaaggaccaatctgtta 33650418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 26879666 - 26879718
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||| |||||||||||||  ||||||||||||| ||| |||||||||    
T  26879666 caaacttaaaagacttatgtgtgataaaaataacttaaatgaccaatctgtta 26879718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 89 - 149
Target Start/End: Original strand, 36956463 - 36956522
Alignment:
Q  89 actaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacga 149  Q
    |||||||||||| | |||||||||| ||| |||||  ||||||||||||||||||||||||    
T  36956463 actaaattgaaa-catttacaaactcaaaagacttgagtgtgaccaaaataacttaaacga 36956522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 146
Target Start/End: Complemental strand, 7489971 - 7489933
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  7489971 caaacttaaaggacttatgtgtgactaaaataatttaaa 7489933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 158
Target Start/End: Original strand, 2633538 - 2633578
Alignment:
Q  118 ggacttatgtgtgaccaaaataacttaaacgactaatctgt 158  Q
    |||||||| |||||||||||||||||||| ||| |||||||    
T  2633538 ggacttatatgtgaccaaaataacttaaatgaccaatctgt 2633578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 36956405 - 36956361
Alignment:
Q  98 aaaacgtttacaaacttaaaggacttatgtgtgaccaaaataact 142  Q
    ||||| |||||||||||| | | ||||||||||||||||||||||    
T  36956405 aaaacatttacaaacttatatggcttatgtgtgaccaaaataact 36956361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 91 - 119
Target Start/End: Original strand, 38699151 - 38699179
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaagg 119  Q
    |||||||||||||||||||||||||||||    
T  38699151 taaattgaaaacgtttacaaacttaaagg 38699179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0279
Description:

Target: scaffold0279; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 92 - 160
Target Start/End: Original strand, 1124 - 1192
Alignment:
Q  92 aaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| |||| ||| |||| ||||    
T  1124 aaattgaaaacttttacaaacttaaaggacttatgtgtgaccaaaataacctaaaggaccaatcagtta 1192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0279; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Original strand, 1200 - 1252
Alignment:
Q  108 caaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgtta 160  Q
    |||||||||| |||||||||||||||||||||||||||| ||| |||||||||    
T  1200 caaacttaaatgacttatgtgtgaccaaaataacttaaaggaccaatctgtta 1252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 240
Target Start/End: Complemental strand, 21672 - 21516
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatctgttagaagtct-----taaaaggacttgtgt 182  Q
    |||||||| ||||||||||||||| ||||| ||||||||||||||| |||||| ||||| || || ||||||| || |||     | ||||||||| |||    
T  21672 gactaaatcgaaaacgtttacaaatttaaaagacttatgtgtgaccgaaataatttaaaggattagtctgttacaaatctcaaacttaaaggacttatgt 21573  T
Q  183 gcgactaaaatactaacttaaa--accaatctgttacaaacctcaaacttacatgactcc 240  Q
    | || |||||   |||||||||  | |||||| |||||||||||||||||| | ||||||    
T  21572 gtgattaaaa---taacttaaatgatcaatctattacaaacctcaaacttaaaggactcc 21516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 88 - 146
Target Start/End: Original strand, 21705 - 21763
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||   ||||||||||||||||| |||||||||||||||||||||||||    
T  21705 gactaaattgaaattttttacaaacttaaaggatttatgtgtgaccaaaataacttaaa 21763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 109 - 146
Target Start/End: Original strand, 21786 - 21823
Alignment:
Q  109 aaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||| |||||||||||||| |||||||||||||    
T  21786 aaacttaaaagacttatgtgtgacaaaaataacttaaa 21823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 2522 - 2465
Alignment:
Q  99 aaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaacgactaatct 156  Q
    |||||||||||||||||||| ||||||||||||| ||||||| ||||| | |||||||    
T  2522 aaacgtttacaaacttaaagaacttatgtgtgactaaaataaattaaatgtctaatct 2465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 146
Target Start/End: Original strand, 2580 - 2635
Alignment:
Q  91 taaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    |||||||||||||||||||||||||||| |||||||||| |  ||| |||||||||    
T  2580 taaattgaaaacgtttacaaacttaaagaacttatgtgttataaaagtaacttaaa 2635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Complemental strand, 12200 - 12143
Alignment:
Q  88 gactaaattgaaaacgtttacaaacttaaaggacttatgtgtgaccaaaataacttaa 145  Q
    |||| ||| ||||| ||||||||||||||||||||| |||||||| ||||||||||||    
T  12200 gactcaatcgaaaatgtttacaaacttaaaggacttgtgtgtgacaaaaataacttaa 12143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 12340 - 12391
Alignment:
Q  196 taacttaaaaccaatctgttacaaacctcaaacttacatgactcctagtata 247  Q
    |||||||||| |||||| |||||||||||||||||| ||||| |||| ||||    
T  12340 taacttaaaatcaatctattacaaacctcaaacttaaatgacccctaatata 12391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0578 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0578
Description:

Target: scaffold0578; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 107 - 146
Target Start/End: Original strand, 2445 - 2484
Alignment:
Q  107 acaaacttaaaggacttatgtgtgaccaaaataacttaaa 146  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  2445 acaaacttaaatgacttatgtgtgaacaaaataacttaaa 2484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1191 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold1191
Description:

Target: scaffold1191; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 83 - 132
Target Start/End: Complemental strand, 1385 - 1336
Alignment:
Q  83 acaaagactaaattgaaaacgtttacaaacttaaaggacttatgtgtgac 132  Q
    |||| |||||||||||||||||||| ||||||||| | | ||||||||||    
T  1385 acaatgactaaattgaaaacgtttataaacttaaaaggcatatgtgtgac 1336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University