View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7987_high_37 (Length: 254)
Name: NF7987_high_37
Description: NF7987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7987_high_37 |
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Alignment Details
Target: chr8 (Bit Score: 230; Significance: 1e-127; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 230; E-Value: 1e-127
Query Start/End: Original strand, 1 - 238
Target Start/End: Original strand, 5351820 - 5352057
Alignment:
| Q |
1 |
tttgagaaacataggctacctcaccatgcaaattaagctgcatttagcgacattataattaagataacaacattgttgatacatataattaatcaaataa |
100 |
Q |
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| T |
5351820 |
tttgagaaacataggctacctcaccatgcaaattaagctgcatttagcgacattataattaagataacaacattgttgatacatataattaatcaaataa |
5351919 |
T |
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| Q |
101 |
aagtactgcatcaagacattattctctctcgttcgtttttagttgtcgttttaagtttatttacatgtatcaacaaataaatgtaacgcaacttttatac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
5351920 |
aagtactgcatcaagacattattctctctcgttcgtttttagttgtcgttttaagtttatttacatgtatcaacaaataaatgtaacacaacttttatac |
5352019 |
T |
|
| Q |
201 |
aaaatcgacggttaaaaaggaatggagagagtgatttt |
238 |
Q |
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|||||||| ||||||||||||||||||||||||||||| |
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| T |
5352020 |
aaaatcgatggttaaaaaggaatggagagagtgatttt |
5352057 |
T |
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