View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7987_high_44 (Length: 242)
Name: NF7987_high_44
Description: NF7987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7987_high_44 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 48077141 - 48077356
Alignment:
| Q |
1 |
aatatttcaaagactaaatggagaatgaaactgggtgaaatttggaaaatattggtgtgagaccatatttaattttcccatcgacatacatatcatatca |
100 |
Q |
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| T |
48077141 |
aatatttcaaagactaaatggagaatgaaactgggtgaaatttggaaaatattggtgtga--ccatatttaattttcccatcgacatacatatcatatca |
48077238 |
T |
|
| Q |
101 |
tgagtataaagtggaaataaataatttactctgtcc------aatccaaatccaaatgaagccaccacttgcagatcacgttgaatggggaaaacagttt |
194 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
48077239 |
tgagtataaagtggaaataaataatttactctgtccaatccaaatccaaatccaaatgaagccaccacttgcagatcacgttgaatggggaaaacagttt |
48077338 |
T |
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| Q |
195 |
ccagggaccacacttcat |
212 |
Q |
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||||| |||||||||||| |
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| T |
48077339 |
ccaggaaccacacttcat |
48077356 |
T |
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