View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7987_low_44 (Length: 252)
Name: NF7987_low_44
Description: NF7987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7987_low_44 |
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Alignment Details
Target: chr7 (Bit Score: 157; Significance: 1e-83; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 16 - 234
Target Start/End: Original strand, 25919482 - 25919685
Alignment:
| Q |
16 |
atcaatatgaaaccaaacttgtttgtttttcttgggtaccataatttaaataacaccaatgtaacacaaagatcatcaatttgttaaccaatataggaat |
115 |
Q |
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| T |
25919482 |
atcaatatgaaaccaaacttgtttgtttttcttgggtaccataatttaaataacaccaatgtaacacaaagatcatcaatttgttaacctatata----- |
25919576 |
T |
|
| Q |
116 |
gaagctagagaaccttatactatatgtttctgaaatctcaatacatcatagattcatagctcaaattaaaatcacatttaaaattgttttttaatttgat |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25919577 |
----------aaccttatactatatgtttctgaaatctcaatacatcatagattcatagctcaaattaaaatcacatttaaaattgttttttaatttgat |
25919666 |
T |
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| Q |
216 |
tatacaccatgtagtatgt |
234 |
Q |
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|||| || ||||||||||| |
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| T |
25919667 |
tatatactatgtagtatgt |
25919685 |
T |
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