View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7987_low_59 (Length: 219)
Name: NF7987_low_59
Description: NF7987
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7987_low_59 |
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Alignment Details
Target: chr8 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 29539011 - 29538811
Alignment:
| Q |
1 |
ggaaaaggtagttagatcatataattcacttgttaaggtatgaaatgaggttggaggggaaaatgtgactgcacgcacaaagctatttattgagatattt |
100 |
Q |
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| T |
29539011 |
ggaaaaggtagttagatcatataattcacttgttaaggtatgaaatgaggttggaggggaaaatgtgactccacgcacaaagctatttattgagatattt |
29538912 |
T |
|
| Q |
101 |
aggtccaacgtgtgcaaattatatgatcattaaacgaatgagtcatattattaagctacgaaagagaaagagagagtgattggacaaagattaagacaag |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
29538911 |
aggtccaacgtgtgcaaattatatgatcattaaacgaatgagtcatattattaagctacaaaagagaaagagagagtgattggacaaagattaagacaag |
29538812 |
T |
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| Q |
201 |
a |
201 |
Q |
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| T |
29538811 |
a |
29538811 |
T |
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