View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7989_high_11 (Length: 239)

Name: NF7989_high_11
Description: NF7989
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7989_high_11
NF7989_high_11
[»] chr2 (24 HSPs)
chr2 (51-221)||(38792871-38793041)
chr2 (53-221)||(39389735-39389903)
chr2 (51-167)||(38792673-38792789)
chr2 (58-218)||(39390580-39390740)
chr2 (58-190)||(39221626-39221758)
chr2 (101-221)||(39415560-39415680)
chr2 (82-194)||(38793151-38793263)
chr2 (58-194)||(39391033-39391169)
chr2 (51-138)||(38792443-38792530)
chr2 (82-169)||(39415283-39415370)
chr2 (82-161)||(39136598-39136677)
chr2 (122-221)||(39137042-39137141)
chr2 (138-220)||(39390534-39390616)
chr2 (87-220)||(39192988-39193121)
chr2 (87-220)||(39198668-39198801)
chr2 (63-135)||(38792567-38792639)
chr2 (138-206)||(39390324-39390392)
chr2 (76-220)||(39451375-39451519)
chr2 (122-161)||(39458568-39458607)
chr2 (84-206)||(39222240-39222362)
chr2 (142-220)||(39415475-39415553)
chr2 (138-219)||(39603204-39603285)
chr2 (112-156)||(39221870-39221914)
chr2 (112-156)||(39222080-39222124)
[»] chr5 (1 HSPs)
chr5 (58-220)||(33560229-33560391)
[»] chr7 (3 HSPs)
chr7 (58-161)||(19806959-19807062)
chr7 (60-184)||(19807188-19807312)
chr7 (170-206)||(19807292-19807328)


Alignment Details
Target: chr2 (Bit Score: 167; Significance: 1e-89; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 51 - 221
Target Start/End: Complemental strand, 38793041 - 38792871
Alignment:
Q  51 cacttgaccttcaaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38793041 cacttgaccttcaaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaa 38792942  T
Q  151 tgcttctgtttcaataccagctccttcatttggctttcaaattctctctctattgactcaaactccttcat 221  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38792941 tgcttctgtttcaataccagctccttcatttggctttcgaattctctctctattgactcaaactccttcat 38792871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 53 - 221
Target Start/End: Original strand, 39389735 - 39389903
Alignment:
Q  53 cttgaccttcaaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatg 152  Q
    ||||||||||||||||   || |||||| |||||||||| ||   ||||||||  ||| ||| ||||  ||||||| ||||||||||||||||   ||||    
T  39389735 cttgaccttcaaattccttctcctttgattcatgctcctgcaattggtcttcaagttgcttcccttttgactcaagctccttcatttggcttttataatg 39389834  T
Q  153 cttctgtttcaataccagctccttcatttggctttcaaattctctctctattgactcaaactccttcat 221  Q
    |||||||||||||||| |||||| |||||||| ||||||| | |||||| |||| ||||||||| ||||    
T  39389835 cttctgtttcaatacctgctcctccatttggcattcaaatcccctctcttttgattcaaactccatcat 39389903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 51 - 167
Target Start/End: Complemental strand, 38792789 - 38792673
Alignment:
Q  51 cacttgaccttcaaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaa 150  Q
    |||||||||||||||||||| ||  ||||| || |||||||||| |||| |||||| ||| || |||||| ||||||| ||||||||| || ||||||||    
T  38792789 cacttgaccttcaaattctctctcttttgattcgtgctccttcacccggccttcatattgcttttctttcgactcaaggtccttcattcggttttcgaaa 38792690  T
Q  151 tgcttctgtttcaatac 167  Q
     ||||||||||||||||    
T  38792689 agcttctgtttcaatac 38792673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 58 - 218
Target Start/End: Original strand, 39390580 - 39390740
Alignment:
Q  58 ccttcaaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttct 157  Q
    ||||||||||||| ||  ||||| |||||||||||||  |||  ||||| ||| ||||||||  ||||||  ||||||||||||||||| ||||||||||    
T  39390580 ccttcaaattctctctcttttgattcatgctccttcactcggctttcatgttgcttctcttttgactcaaactccttcatttggctttcaaaatgcttct 39390679  T
Q  158 gtttcaataccagctccttcatttggctttcaaattctctctctattgactcaaactcctt 218  Q
    ||||  ||| ||  ||| ||||||||| |||||||||  ||||| |||| |||||||||||    
T  39390680 gttttgatagcaaatccatcatttggcattcaaattccttctcttttgattcaaactcctt 39390740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 58 - 190
Target Start/End: Complemental strand, 39221758 - 39221626
Alignment:
Q  58 ccttcaaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttct 157  Q
    ||||||||||||| ||  |||||  |||||||||||| || | |||||| ||| ||||||||  ||||||  |||||||| |||||||| ||||| || |    
T  39221758 ccttcaaattctctctcttttgatccatgctccttcacccagccttcatgttgcttctcttttgactcaaactccttcatctggctttcaaaatgttttt 39221659  T
Q  158 gtttcaataccagctccttcatttggctttcaa 190  Q
    |||| ||  | ||||||||||||||||||||||    
T  39221658 gttttaactcaagctccttcatttggctttcaa 39221626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 101 - 221
Target Start/End: Original strand, 39415560 - 39415680
Alignment:
Q  101 cttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttctgtttcaataccagctccttcatttggctttcaaattctctctc 200  Q
    |||||| ||| ||||||||   |||||| |||||||||   |||| |||||||||||||||  || |||| ||||||||||||| ||||||||| |||||    
T  39415560 cttcatgttgcttctcttttgcctcaagctccttcattctccttttgaaatgcttctgttttgatgccagttccttcatttggccttcaaattccctctc 39415659  T
Q  201 tattgactcaaactccttcat 221  Q
    | |||| | ||||||||||||    
T  39415660 ttttgatttaaactccttcat 39415680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 82 - 194
Target Start/End: Complemental strand, 38793263 - 38793151
Alignment:
Q  82 tcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttctgtttcaataccagctccttcattt 181  Q
    ||||||||||||| |||  |||||| ||| |||||||| ||||||||   ||||||  ||||||| |||  ||||| |||||||||||| | ||||||||    
T  38793263 tcatgctccttcacccgaccttcatgttgcttctcttttaactcaagcatcttcatccggctttcaaaacacttctttttcaataccagtttcttcattt 38793164  T
Q  182 ggctttcaaattc 194  Q
     ||||||||||||    
T  38793163 tgctttcaaattc 38793151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 58 - 194
Target Start/End: Original strand, 39391033 - 39391169
Alignment:
Q  58 ccttcaaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttct 157  Q
    |||||||||||   || |||| | |||||||||||||   || |||||  ||| ||||||||  ||||||| |||||||||||||||||  |||||||||    
T  39391033 ccttcaaattccttctcctttaattcatgctccttcaattggccttcaagttgtttctctttggactcaagctccttcatttggctttcacaatgcttct 39391132  T
Q  158 gtttcaataccagctccttcatttggctttcaaattc 194  Q
    | ||||||||| ||| | ||| ||||| |||||||||    
T  39391133 gcttcaatacctgctgcgtcaattggcattcaaattc 39391169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 51 - 138
Target Start/End: Complemental strand, 38792530 - 38792443
Alignment:
Q  51 cacttgaccttcaaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatt 138  Q
    |||||||||||||||||||| | | ||||| ||||||||||||| |||  ||||||  || |||||||| |||||||| |||||||||    
T  38792530 cacttgaccttcaaattctctcgtttttgattcatgctccttcacccgaccttcatgctgcttctcttttaactcaaggtccttcatt 38792443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 82 - 169
Target Start/End: Original strand, 39415283 - 39415370
Alignment:
Q  82 tcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttctgtttcaatacca 169  Q
    |||||||||||||  ||| |||||| ||| ||  ||||| ||||||| || |||| ||||||||| ||||||||||||||||||||||    
T  39415283 tcatgctccttcaatcggacttcatcttgctttgctttcgactcaagctctttcacttggctttctaaatgcttctgtttcaatacca 39415370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 82 - 161
Target Start/End: Complemental strand, 39136677 - 39136598
Alignment:
Q  82 tcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttctgttt 161  Q
    |||||||||||||  ||| |||||  |||  |||||||| ||||||| ||||| || |||||||||||||||||||||||    
T  39136677 tcatgctccttcaatcggccttcaagttgcctctctttcgactcaagctccttaatatggctttcgaaatgcttctgttt 39136598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 122 - 221
Target Start/End: Complemental strand, 39137141 - 39137042
Alignment:
Q  122 actcaagttccttcatttggctttcgaaatgcttctgtttcaataccagctccttcatttggctttcaaattctctctctattgactcaaactccttcat 221  Q
    ||||||| ||| ||||| |||| || ||||| || || ||||||||||  ||||||||||||| |||||||||  ||||| |||| | ||||||||||||    
T  39137141 actcaagatccatcattcggctatcaaaatggttttgattcaataccatttccttcatttggccttcaaattccatctcttttgatttaaactccttcat 39137042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 220
Target Start/End: Original strand, 39390534 - 39390616
Alignment:
Q  138 ttggctttcgaaatgcttctgtttcaataccagctccttcatttggctttcaaattctctctctattgactcaaactccttca 220  Q
    ||||||||| |||||||||  |||  || |||| ||||||||||||| |||||||||||||||| |||| |||  ||||||||    
T  39390534 ttggctttcaaaatgcttccttttagattccagttccttcatttggccttcaaattctctctcttttgattcatgctccttca 39390616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 39192988 - 39193121
Alignment:
Q  87 ctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttctgtttcaataccagctccttcatttggctt 186  Q
    |||||||| ||| ||||||  ||  |||||||| || ||||| ||||||||  || |||||||||||| ||||||  |||||   ||| ||||||||| |    
T  39192988 ctccttcacccgatcttcaaattttttctcttttaattcaagatccttcatccggttttcgaaatgctcctgttttgataccgagtccgtcatttggcat 39193087  T
Q  187 tcaaattctctctctattgactcaaactccttca 220  Q
    ||||||||  ||||| |||| ||||||| |||||    
T  39193088 tcaaattccttctcttttgattcaaacttcttca 39193121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 87 - 220
Target Start/End: Original strand, 39198668 - 39198801
Alignment:
Q  87 ctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttctgtttcaataccagctccttcatttggctt 186  Q
    |||||||| ||| ||||||  ||  |||||||| || ||||| ||||||||  || |||||||||||| ||||||  |||||   ||| ||||||||| |    
T  39198668 ctccttcacccgatcttcaaattttttctcttttaattcaagatccttcatccggttttcgaaatgctcctgttttgataccgagtccgtcatttggcat 39198767  T
Q  187 tcaaattctctctctattgactcaaactccttca 220  Q
    ||||||||  ||||| |||| ||||||| |||||    
T  39198768 tcaaattccttctcttttgattcaaacttcttca 39198801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 38792639 - 38792567
Alignment:
Q  63 aaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttc 135  Q
    |||||||| ||| ||||| |||||||||| || | || |||||| ||| ||||||||| ||||||||||||||    
T  38792639 aaattctctcttttttgattcatgctcctccacctggccttcatgttgcttctctttcgactcaagttccttc 38792567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 138 - 206
Target Start/End: Original strand, 39390324 - 39390392
Alignment:
Q  138 ttggctttcgaaatgcttctgtttcaataccagctccttcatttggctttcaaattctctctctattga 206  Q
    ||||||||| |||||||||  |||  || |||| ||||||||||||| |||||||||||||||| ||||    
T  39390324 ttggctttcaaaatgcttccttttagattccagttccttcatttggccttcaaattctctctcttttga 39390392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 220
Target Start/End: Complemental strand, 39451519 - 39451375
Alignment:
Q  76 tttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttctgtttcaataccagctcct 175  Q
    ||||| ||||||||||||| ||||  ||||  ||| ||||| ||  | ||||| |||| |||  |||||||  |||| |||||||| ||| ||| |||||    
T  39451519 tttgattcatgctccttcaaccggctttcaagttgcttctcatttgagtcaaggtcctccatccggctttcataatgtttctgttttaattccaactcct 39451420  T
Q  176 tcatttggctttcaaattctctctctattgactcaaactccttca 220  Q
    ||||||| |||||||| ||| | ||| |||  |||||||||||||    
T  39451419 tcatttgactttcaaactctttttcttttgtttcaaactccttca 39451375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 39458607 - 39458568
Alignment:
Q  122 actcaagttccttcatttggctttcgaaatgcttctgttt 161  Q
    ||||||| ||||||||| ||||||||||||||||||||||    
T  39458607 actcaagctccttcattcggctttcgaaatgcttctgttt 39458568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 84 - 206
Target Start/End: Complemental strand, 39222362 - 39222240
Alignment:
Q  84 atgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttctgtttcaataccagctccttcatttgg 183  Q
    |||||||||||   || |||||  ||| ||||||||  ||||||  |||||||||||||||||||||||||||  |||  || |||||| ||||   |||    
T  39222362 atgctccttcacttggccttcaagttgcttctctttagactcaaactccttcatttggctttcgaaatgcttccttttagattccagctgcttcgcctgg 39222263  T
Q  184 ctttcaaattctctctctattga 206  Q
    | ||||||||| |||||| ||||    
T  39222262 ccttcaaattccctctcttttga 39222240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 142 - 220
Target Start/End: Original strand, 39415475 - 39415553
Alignment:
Q  142 ctttcgaaatgcttctgtttcaataccagctccttcatttggctttcaaattctctctctattgactcaaactccttca 220  Q
    ||||| || ||||||| |||  || |||||||| ||| |||||||| ||||||||||||| |||| ||| |||||||||    
T  39415475 ctttcaaattgcttctttttagattccagctccctcacttggcttttaaattctctctcttttgattcacactccttca 39415553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 219
Target Start/End: Complemental strand, 39603285 - 39603204
Alignment:
Q  138 ttggctttcgaaatgcttctgtttcaataccagctccttcatttggctttcaaattctctctctattgactcaaactccttc 219  Q
    ||||||||| |||||||||| |||  || |||||||||||  |||  ||||||||||||||||| |||| |||  |||||||    
T  39603285 ttggctttcaaaatgcttctttttagattccagctccttcgcttgaatttcaaattctctctcttttgattcatgctccttc 39603204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 39221914 - 39221870
Alignment:
Q  112 ttctctttcaactcaagttccttcatttggctttcgaaatgcttc 156  Q
    ||||||||  ||||||  |||||||||||||||||||||||||||    
T  39221914 ttctctttagactcaaactccttcatttggctttcgaaatgcttc 39221870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 156
Target Start/End: Complemental strand, 39222124 - 39222080
Alignment:
Q  112 ttctctttcaactcaagttccttcatttggctttcgaaatgcttc 156  Q
    ||||||||  ||||||  |||||||||||||||||||||||||||    
T  39222124 ttctctttagactcaaactccttcatttggctttcgaaatgcttc 39222080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 58 - 220
Target Start/End: Complemental strand, 33560391 - 33560229
Alignment:
Q  58 ccttcaaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttct 157  Q
    |||||||||||   || |||||| |||||||| ||||  ||| |||||  ||| ||||||||  ||| ||| |||||||||||||||||  |||||| ||    
T  33560391 ccttcaaattccttctcctttgactcatgctcattcaatcggccttcaagttgcttctcttttgactgaagctccttcatttggctttctcaatgctcct 33560292  T
Q  158 gtttcaataccagctccttcatttggctttcaaattctctctctattgactcaaactccttca 220  Q
    ||||||||||  |||||||||||||| ||||||| ||  ||||| |||| |||||||||||||    
T  33560291 gtttcaatacatgctccttcatttggttttcaaaatccttctcttttgattcaaactccttca 33560229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000005; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 58 - 161
Target Start/End: Complemental strand, 19807062 - 19806959
Alignment:
Q  58 ccttcaaattctcgcttctt-tgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttc 156  Q
    |||||||||||| | ||||| ||| |||||||||||||  ||| |||||  |||  |||||||| ||||||| ||||| || ||||||||||||||||||    
T  19807062 ccttcaaattcttg-ttcttctgattcatgctccttcaatcggccttcaagttgcctctctttcgactcaagctccttaatatggctttcgaaatgcttc 19806964  T
Q  157 tgttt 161  Q
    |||||    
T  19806963 tgttt 19806959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 60 - 184
Target Start/End: Complemental strand, 19807312 - 19807188
Alignment:
Q  60 ttcaaattctcgcttctttgagtcatgctccttcatccggtcttcattttggttctctttcaactcaagttccttcatttggctttcgaaatgcttctgt 159  Q
    ||||||||||| ||  |||||  ||||||||||||||||| ||||||  || ||||||||  ||||||| ||||| ||| || |||| || ||| ||| |    
T  19807312 ttcaaattctctctcttttgatgcatgctccttcatccggccttcatgctgcttctcttttgactcaagctccttgattcggttttcaaactgcctcttt 19807213  T
Q  160 ttcaataccagctccttcatttggc 184  Q
    ||  || |||||||||||| |||||    
T  19807212 ttagattccagctccttcacttggc 19807188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 206
Target Start/End: Complemental strand, 19807328 - 19807292
Alignment:
Q  170 gctccttcatttggctttcaaattctctctctattga 206  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  19807328 gctccatcatttggctttcaaattctctctcttttga 19807292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University