View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7991_high_36 (Length: 241)
Name: NF7991_high_36
Description: NF7991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7991_high_36 |
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Alignment Details
Target: chr3 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 39280234 - 39280445
Alignment:
| Q |
5 |
aagaatctcttaaactatttcaattgtattgtaaattccccgaagttcagccatgagaaccgaacacgatccggacattgcactcttttattagataacg |
104 |
Q |
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| T |
39280234 |
aagaatctcttaaactatttcaattgtattgtaaattccccgaagttcagccatgagaaccgaacacgatccggacattgcactcttttattagataacg |
39280333 |
T |
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| Q |
105 |
atgtaaacgatgtaaaacccagcaaacgaactattcctatttctttcaagtttcaaccaaaacaatacattacttcaatttctaacatcacaatgctata |
204 |
Q |
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| T |
39280334 |
---------atgtaaaacccagcaaacgaactattcctatttctttcaagtttcaaccaaaacaatccattacttcaattactaacatcacaatgctata |
39280424 |
T |
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| Q |
205 |
tacacttgcagtgcaagttaa |
225 |
Q |
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| T |
39280425 |
tacacttgcagtgcaagttaa |
39280445 |
T |
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