View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7991_low_10 (Length: 525)
Name: NF7991_low_10
Description: NF7991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7991_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 429; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 429; E-Value: 0
Query Start/End: Original strand, 19 - 506
Target Start/End: Complemental strand, 38194184 - 38193693
Alignment:
| Q |
19 |
tatgtggtgttttccaacttgaatgagacttcacaataaagatgcatgtgagtcgttatccctccaattttgtgttatgtaacaataatgttgagaatag |
118 |
Q |
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| T |
38194184 |
tatgtggtgttttccaacttgaatgagacttcacaataaagatg----tgagtcgttatccctccaattttgtgttatgtaacaataatgttgagaatag |
38194089 |
T |
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| Q |
119 |
tttacat-----tttcaagtatcgtagaagttgt---aatatttggaggatgtgtactttttctcatggtgtgagggatgttatgaacggagagcaagcc |
210 |
Q |
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| T |
38194088 |
tttacatgtatttttcaagtatcgtagaagttgttgtaatatttggaggatgtgtactttttctcatggtgtgagggatgttatgaacggagagcaagcc |
38193989 |
T |
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| Q |
211 |
atttcaggtattgttttccaaattccgcagcaattaacaattgaagattcgaatttatttgcttgtgtcttatggagtatttgaaagcaacgtaatatta |
310 |
Q |
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| T |
38193988 |
atttcaggtattgttttccaaattccgcagcaattaacaattgaagattcgaatttatttgcttgtgtcttatggagtatttgaaagcaatgtaatatta |
38193889 |
T |
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| Q |
311 |
taatctggaataatgtaattgatgctcaatggttgatctttagttgtgcgcaaacaatgctacaagatttgaaatcagttcatcattaggttgtagatag |
410 |
Q |
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| T |
38193888 |
taatctggaataatgtaattgatgctcaatgtttgatctttagttgtgcgcaaacaaagctacaagatttgaaatcagttcatcattaggttgtagatag |
38193789 |
T |
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| Q |
411 |
tccaaacttgattaagccccaaaatagatattatcagttggaagataccaatggtagatcacgtaaaatgtaatattgatgtttctttttcttctc |
506 |
Q |
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| T |
38193788 |
tccaaacttgattaagccccaaaatagatattatcagttggaagataccaatggtagatcgcgtaaaatgtaatattgatgtttctttttcttctc |
38193693 |
T |
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