View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7991_low_13 (Length: 521)

Name: NF7991_low_13
Description: NF7991
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7991_low_13
NF7991_low_13
[»] chr7 (50 HSPs)
chr7 (19-502)||(6584699-6585176)
chr7 (203-378)||(34389926-34390099)
chr7 (203-377)||(41089693-41089865)
chr7 (203-378)||(35745770-35745944)
chr7 (203-366)||(33435073-33435234)
chr7 (203-363)||(47325845-47326002)
chr7 (203-354)||(3419624-3419773)
chr7 (203-354)||(25160779-25160925)
chr7 (203-363)||(38306225-38306382)
chr7 (203-377)||(3867080-3867252)
chr7 (203-363)||(10244146-10244303)
chr7 (207-363)||(37794957-37795110)
chr7 (53-203)||(42533509-42533663)
chr7 (203-377)||(8745117-8745287)
chr7 (53-200)||(34389634-34389783)
chr7 (210-363)||(5860248-5860398)
chr7 (38-203)||(47326141-47326310)
chr7 (203-299)||(16954617-16954713)
chr7 (203-283)||(42533289-42533369)
chr7 (53-203)||(3419912-3420066)
chr7 (32-203)||(3478003-3478178)
chr7 (261-363)||(44353524-44353623)
chr7 (32-199)||(16954304-16954474)
chr7 (203-277)||(44755591-44755664)
chr7 (65-177)||(9106852-9106964)
chr7 (43-164)||(1320455-1320580)
chr7 (42-129)||(25160477-25160564)
chr7 (456-511)||(34391427-34391482)
chr7 (215-301)||(3478328-3478414)
chr7 (203-301)||(6716755-6716853)
chr7 (203-276)||(1320758-1320831)
chr7 (53-205)||(8744824-8744980)
chr7 (203-292)||(38485520-38485609)
chr7 (203-299)||(16828957-16829053)
chr7 (42-129)||(10243848-10243935)
chr7 (53-199)||(33434779-33434931)
chr7 (203-356)||(46133244-46133395)
chr7 (207-301)||(24324817-24324911)
chr7 (377-511)||(35745601-35745740)
chr7 (37-203)||(37794657-37794826)
chr7 (37-203)||(38305917-38306086)
chr7 (203-301)||(47457041-47457139)
chr7 (203-300)||(13311803-13311900)
chr7 (132-167)||(6717024-6717059)
chr7 (335-369)||(36449176-36449210)
chr7 (327-369)||(48161978-48162020)
chr7 (250-283)||(25153231-25153264)
chr7 (250-283)||(27993573-27993606)
chr7 (247-283)||(9349757-9349793)
chr7 (322-362)||(23983286-23983326)
[»] chr1 (48 HSPs)
chr1 (203-378)||(27031784-27031957)
chr1 (203-364)||(46814425-46814584)
chr1 (203-369)||(24658893-24659057)
chr1 (203-374)||(7857617-7857786)
chr1 (203-369)||(24684431-24684595)
chr1 (203-363)||(24449890-24450047)
chr1 (203-363)||(30685864-30686021)
chr1 (203-363)||(46692779-46692936)
chr1 (32-154)||(52278156-52278279)
chr1 (203-363)||(41920417-41920573)
chr1 (203-363)||(5389381-5389538)
chr1 (203-363)||(31585720-31585877)
chr1 (23-153)||(16147210-16147341)
chr1 (211-363)||(5459133-5459282)
chr1 (32-167)||(7857301-7857439)
chr1 (58-205)||(30686158-30686308)
chr1 (375-511)||(46814246-46814387)
chr1 (37-203)||(31586016-31586186)
chr1 (375-511)||(7857814-7857954)
chr1 (203-301)||(9313308-9313406)
chr1 (222-283)||(6583253-6583314)
chr1 (20-177)||(46814750-46814910)
chr1 (43-204)||(10785582-10785748)
chr1 (37-129)||(46693152-46693244)
chr1 (37-176)||(24450214-24450357)
chr1 (38-168)||(27101966-27102089)
chr1 (203-292)||(4651744-4651833)
chr1 (224-300)||(17033571-17033647)
chr1 (37-129)||(20113854-20113946)
chr1 (215-275)||(34774847-34774907)
chr1 (453-511)||(27031620-27031677)
chr1 (203-276)||(20113565-20113638)
chr1 (203-299)||(19598600-19598696)
chr1 (404-511)||(24659123-24659230)
chr1 (37-129)||(24684809-24684901)
chr1 (215-283)||(40933839-40933907)
chr1 (37-129)||(41920137-41920228)
chr1 (42-168)||(9313517-9313649)
chr1 (20-177)||(24658566-24658725)
chr1 (64-162)||(19598342-19598440)
chr1 (238-284)||(27905411-27905457)
chr1 (203-369)||(27102154-27102317)
chr1 (207-292)||(42374131-42374216)
chr1 (94-177)||(27032147-27032231)
chr1 (114-177)||(38545017-38545080)
chr1 (230-300)||(38544758-38544828)
chr1 (222-283)||(32864598-32864659)
chr1 (64-152)||(17033273-17033361)
[»] chr3 (41 HSPs)
chr3 (203-369)||(23328303-23328467)
chr3 (219-378)||(45398776-45398933)
chr3 (203-378)||(40023516-40023688)
chr3 (203-377)||(19176467-19176638)
chr3 (204-363)||(2392466-2392622)
chr3 (203-366)||(9584009-9584170)
chr3 (203-363)||(34475714-34475871)
chr3 (203-363)||(20611747-20611904)
chr3 (32-205)||(37123040-37123218)
chr3 (238-369)||(43012374-43012503)
chr3 (53-200)||(40023829-40023975)
chr3 (32-203)||(47235366-47235541)
chr3 (210-354)||(45163824-45163967)
chr3 (204-282)||(2394291-2394369)
chr3 (37-202)||(25647336-25647507)
chr3 (207-282)||(14193908-14193983)
chr3 (406-511)||(45398993-45399099)
chr3 (375-509)||(23328131-23328270)
chr3 (38-203)||(20611439-20611608)
chr3 (449-511)||(40023350-40023412)
chr3 (309-374)||(21342603-21342668)
chr3 (37-129)||(45163504-45163596)
chr3 (85-203)||(14193641-14193763)
chr3 (250-363)||(17550968-17551078)
chr3 (42-176)||(34476037-34476173)
chr3 (203-283)||(25647648-25647728)
chr3 (225-283)||(14879421-14879479)
chr3 (223-363)||(31482868-31483005)
chr3 (67-167)||(1653176-1653276)
chr3 (37-129)||(19176159-19176251)
chr3 (203-300)||(14755285-14755380)
chr3 (203-276)||(30935434-30935507)
chr3 (203-300)||(37123346-37123443)
chr3 (37-129)||(2394591-2394683)
chr3 (249-300)||(33143969-33144020)
chr3 (203-301)||(47945669-47945768)
chr3 (235-355)||(1652855-1652971)
chr3 (209-243)||(47235686-47235720)
chr3 (270-363)||(47235729-47235819)
chr3 (32-77)||(4464323-4464368)
chr3 (470-507)||(50305359-50305396)
[»] chr8 (33 HSPs)
chr8 (203-369)||(15821332-15821496)
chr8 (207-377)||(36630805-36630973)
chr8 (203-363)||(34388965-34389122)
chr8 (203-363)||(32066255-32066412)
chr8 (203-356)||(9519463-9519613)
chr8 (203-363)||(37986818-37986975)
chr8 (203-363)||(24995355-24995512)
chr8 (203-363)||(31207322-31207478)
chr8 (32-167)||(10248845-10248982)
chr8 (304-378)||(38577734-38577808)
chr8 (30-168)||(17657297-17657438)
chr8 (450-511)||(38577567-38577628)
chr8 (37-129)||(34389311-34389403)
chr8 (37-129)||(36630493-36630585)
chr8 (261-363)||(20138448-20138547)
chr8 (203-301)||(10248572-10248670)
chr8 (218-351)||(16457433-16457562)
chr8 (30-177)||(15821663-15821812)
chr8 (203-300)||(30236148-30236245)
chr8 (37-203)||(37987114-37987284)
chr8 (37-129)||(32066628-32066720)
chr8 (408-510)||(35816026-35816128)
chr8 (327-378)||(35816187-35816238)
chr8 (375-511)||(15821157-15821299)
chr8 (203-276)||(10552233-10552305)
chr8 (37-165)||(24995690-24995817)
chr8 (64-177)||(30236377-30236490)
chr8 (235-292)||(35062453-35062510)
chr8 (216-292)||(12898302-12898378)
chr8 (109-177)||(18690160-18690228)
chr8 (222-301)||(17657021-17657100)
chr8 (239-300)||(15906686-15906747)
chr8 (37-126)||(34866375-34866464)
[»] chr2 (40 HSPs)
chr2 (203-369)||(7874255-7874419)
chr2 (203-375)||(14405163-14405332)
chr2 (32-203)||(17105062-17105236)
chr2 (207-363)||(39338825-39338978)
chr2 (218-369)||(14106475-14106626)
chr2 (243-378)||(5254260-5254393)
chr2 (217-378)||(387151-387311)
chr2 (375-507)||(14106305-14106442)
chr2 (42-205)||(41087040-41087208)
chr2 (375-507)||(7460837-7460974)
chr2 (375-511)||(5254417-5254553)
chr2 (375-504)||(7874452-7874585)
chr2 (22-168)||(37770933-37771085)
chr2 (30-167)||(1269128-1269270)
chr2 (203-283)||(10524061-10524141)
chr2 (222-301)||(1269466-1269545)
chr2 (38-203)||(39339121-39339290)
chr2 (203-276)||(37770685-37770758)
chr2 (203-369)||(10173532-10173695)
chr2 (207-297)||(17105379-17105470)
chr2 (32-203)||(7695719-7695893)
chr2 (108-177)||(22885412-22885481)
chr2 (246-301)||(16959989-16960044)
chr2 (223-369)||(22885088-22885229)
chr2 (222-283)||(9560825-9560886)
chr2 (203-284)||(41086824-41086904)
chr2 (251-369)||(2062901-2063015)
chr2 (109-177)||(15710437-15710505)
chr2 (109-177)||(15722900-15722968)
chr2 (247-369)||(34230209-34230327)
chr2 (222-284)||(8520385-8520447)
chr2 (335-369)||(16952337-16952371)
chr2 (335-369)||(17023002-17023036)
chr2 (335-369)||(17060308-17060342)
chr2 (97-159)||(25505196-25505258)
chr2 (203-292)||(27739939-27740028)
chr2 (103-203)||(10523819-10523922)
chr2 (108-151)||(16952681-16952725)
chr2 (108-151)||(17023346-17023390)
chr2 (108-151)||(17060652-17060696)
[»] chr4 (29 HSPs)
chr4 (210-378)||(31050605-31050772)
chr4 (203-363)||(8254991-8255148)
chr4 (203-363)||(8268409-8268566)
chr4 (203-378)||(2825747-2825920)
chr4 (32-203)||(19672753-19672927)
chr4 (37-203)||(8254683-8254852)
chr4 (37-203)||(8268101-8268270)
chr4 (203-301)||(53823440-53823538)
chr4 (203-363)||(30964405-30964562)
chr4 (287-378)||(35341282-35341371)
chr4 (203-345)||(4305689-4305828)
chr4 (53-203)||(31050917-31051070)
chr4 (213-301)||(19815243-19815331)
chr4 (203-354)||(25753136-25753283)
chr4 (203-301)||(38929791-38929889)
chr4 (236-298)||(49747524-49747586)
chr4 (44-203)||(30964104-30964266)
chr4 (203-300)||(2061758-2061855)
chr4 (37-199)||(4305381-4305546)
chr4 (215-301)||(19673077-19673162)
chr4 (203-301)||(22811179-22811276)
chr4 (226-283)||(35800476-35800533)
chr4 (203-283)||(21387241-21387321)
chr4 (376-511)||(31050440-31050580)
chr4 (118-203)||(22811416-22811504)
chr4 (210-281)||(19311381-19311451)
chr4 (222-292)||(36962643-36962713)
chr4 (250-292)||(39041302-39041344)
chr4 (222-283)||(39421050-39421111)
[»] chr5 (25 HSPs)
chr5 (203-363)||(29087445-29087603)
chr5 (203-363)||(34378062-34378219)
chr5 (203-363)||(698325-698482)
chr5 (203-302)||(7392049-7392148)
chr5 (37-177)||(29087204-29087346)
chr5 (32-168)||(26046256-26046395)
chr5 (32-177)||(7195523-7195672)
chr5 (64-177)||(24072546-24072659)
chr5 (203-354)||(18593207-18593355)
chr5 (203-300)||(33258902-33258999)
chr5 (203-377)||(14302377-14302547)
chr5 (203-283)||(13954271-13954350)
chr5 (203-301)||(7195258-7195355)
chr5 (32-167)||(13954525-13954663)
chr5 (306-369)||(7162270-7162333)
chr5 (203-301)||(8297432-8297530)
chr5 (203-300)||(24072286-24072383)
chr5 (203-292)||(31721641-31721730)
chr5 (242-301)||(22675343-22675402)
chr5 (205-298)||(25991973-25992066)
chr5 (239-283)||(26046001-26046045)
chr5 (97-159)||(8730649-8730711)
chr5 (222-292)||(28765630-28765700)
chr5 (250-282)||(25341709-25341741)
chr5 (108-159)||(27712819-27712871)
[»] chr6 (17 HSPs)
chr6 (37-203)||(16510549-16510718)
chr6 (42-177)||(20702086-20702225)
chr6 (203-298)||(16510323-16510418)
chr6 (203-363)||(3117457-3117614)
chr6 (203-369)||(20701758-20701920)
chr6 (38-177)||(12793776-12793916)
chr6 (203-276)||(3880627-3880700)
chr6 (203-258)||(15132585-15132640)
chr6 (215-297)||(32935362-32935444)
chr6 (37-203)||(15132778-15132947)
chr6 (223-297)||(12794098-12794173)
chr6 (226-297)||(26216042-26216112)
chr6 (226-282)||(26534757-26534813)
chr6 (255-301)||(13423482-13423528)
chr6 (250-283)||(7546466-7546499)
chr6 (207-300)||(9224010-9224102)
chr6 (236-292)||(34105410-34105466)
[»] scaffold0068 (2 HSPs)
scaffold0068 (203-354)||(35741-35888)
scaffold0068 (53-203)||(36028-36181)
[»] scaffold0200 (1 HSPs)
scaffold0200 (222-369)||(19366-19509)
[»] scaffold0063 (2 HSPs)
scaffold0063 (32-167)||(57842-57981)
scaffold0063 (226-276)||(58114-58164)
[»] scaffold0050 (2 HSPs)
scaffold0050 (203-299)||(36671-36767)
scaffold0050 (20-168)||(36340-36495)
[»] scaffold0119 (2 HSPs)
scaffold0119 (30-167)||(42432-42574)
scaffold0119 (222-301)||(42157-42236)
[»] scaffold0062 (4 HSPs)
scaffold0062 (71-153)||(46784-46866)
scaffold0062 (203-283)||(47057-47137)
scaffold0062 (109-177)||(59349-59417)
scaffold0062 (109-177)||(71457-71525)
[»] scaffold1613 (2 HSPs)
scaffold1613 (114-177)||(1296-1359)
scaffold1613 (230-300)||(1037-1107)
[»] scaffold0343 (1 HSPs)
scaffold0343 (308-354)||(5772-5818)


Alignment Details
Target: chr7 (Bit Score: 317; Significance: 1e-178; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 317; E-Value: 1e-178
Query Start/End: Original strand, 19 - 502
Target Start/End: Original strand, 6584699 - 6585176
Alignment:
Q  19 tgggggtggtagatgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgct 118  Q
    |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||||||||| |||||||||||    
T  6584699 tgggggtggttggtgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagatagcctctattacacgggtccatgatcgtcgtcgct 6584798  T
Q  119 agctcttgttt-catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtccgttgcgatgagccttttccttttgatctctggtgtaccgg 217  Q
    ||||||||||| ||||| ||||||||||||||||||         ||||| |||||  |||||||||||||||||||||||||||||| |||||||||||    
T  6584799 agctcttgtttgcatttatgggttgttaaggtgttt---------ggagggtgcgt--ccgttgcgatgagccttttccttttgatctatggtgtaccgg 6584887  T
Q  218 gggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttt 317  Q
     ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||  ||||||||||||||    
T  6584888 aggcgaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggc--ttaagttggttttt 6584985  T
Q  318 tggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgtggctcagcttgggtgttgaagtatg-----tttattttg 412  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||     |||||||||    
T  6584986 gggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgtggctcagcttgggtgttgaagtctgggagttttattttg 6585085  T
Q  413 agggttgctctttggaggtaagtagcgacgatgagt-gttgtggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttagg 502  Q
    |||| |||| ||||||||| ||||| |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  6585086 aggggtgctatttggaggtgagtagtgacgatgagtggttgtggatactgtgttttcagtgttttgtttctgttaaggtgtccgtcttagg 6585176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 203 - 378
Target Start/End: Original strand, 34389926 - 34390099
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||| ||||| |||| ||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||     
T  34389926 tctctggtgtactgggggtgaggagtgccctgctgatttggttttaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggc- 34390024  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 378  Q
     |||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  34390025 -ttaagttggtttttgggcttttattttgtgctctttcggtggatcggaggtcgagaggttgtggaagctgcatgt 34390099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 203 - 377
Target Start/End: Complemental strand, 41089865 - 41089693
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||| |||||||||||||||| ||||| ||||||| ||||||||||||||||||||||||||||||| |||||   ||||||||||||||  |    
T  41089865 tctctggtgtatcgggggcgaggggtgctctgctaatttggtactaaagtctggtggaccgatcacttttgattcgagattgggagtcagctctttg--a 41089768  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 377  Q
     | ||||||||||||  |||||||||||||| |||||||||||||||||||| | |||||||||||| |||||||    
T  41089767 ctcaagttggtttttgagcttttgttttgtgatctttcggtggatcggaggtcgcgaggttgtggaagctgcatg 41089693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 203 - 378
Target Start/End: Complemental strand, 35745944 - 35745770
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||| |||||||||||||||||||||||| || |||| ||||||||||||| ||| | |||||||||||||| ||||||   ||||| |||||||||     
T  35745944 tctctgatgtaccgggggcgaggggtgccctactaattttgttctaaagtctgatgggctgatcacttttgattcgagatcggaagtcatctctttggc- 35745846  T
Q  303 attaagttggttttttggcttttg-ttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 378  Q
     | |||||||||||| |||||||| ||||||||||||||||||||| |||||| |||||||||||||| ||||||||    
T  35745845 -tcaagttggtttttgggcttttgtttttgtgctctttcggtggattggaggtggagaggttgtggaagctgcatgt 35745770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 203 - 366
Target Start/End: Original strand, 33435073 - 33435234
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||||||||||||||||| | ||||||| |||||||||||||   ||||||||||||||| ||||||  ||||||| |||||| |     
T  33435073 tctctggtgtaccgggggcgaggggtgccctgttaatttggtactaaagtctggtgagacgatcacttttgattcgagatcgggagtcagttctttgtc- 33435171  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtg 366  Q
     | ||||| |||| | ||| |||||||||||||||||||||||||||||||| | |||||||||    
T  33435172 -tcaagttcgtttgtgggcatttgttttgtgctctttcggtggatcggaggtcgcgaggttgtg 33435234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 47326002 - 47325845
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||||||||||||||||||| |||| ||||||| ||| |||||||||| |||||| ||||||||||||||||  ||||||||||||||  |    
T  47326002 tctctggtgtaccgggggcgaggggtgccttgctaatttggtactatagtctggtgggccgatcgcttttgatttgagatcgggagtcagctctttg--a 47325905  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | |||||||||||| ||| |||||  |||||||||||| |||||||||||| | ||||||    
T  47325904 ctcaagttggtttttgggc-tttgtgctgtgctctttcgatggatcggaggtcgcgaggtt 47325845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 3419773 - 3419624
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||| ||||||||||||||||||||||| | ||||||| ||||||| |||||| | |||||||||||||| ||||||  ||||||||||||||  |    
T  3419773 tctctggtataccgggggcgaggggtgccctgttaatttggtactaaagtgtggtgggctgatcacttttgattcgagatcgggagtcagctctttg--a 3419676  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 354  Q
     | |||||||||||| ||||||  || ||||||||||||||||||| |||||    
T  3419675 ctcaagttggtttttgggctttgtttctgtgctctttcggtggatcagaggt 3419624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 25160779 - 25160925
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||| ||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||||   |||||  ||||  | |    
T  25160779 tctctggtgtaccgagggcgaggggtgccctgctaatttggttctatagtctggtggaccgattacttttgattcgagatcggaagtcaaatctt--gaa 25160876  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 354  Q
    ||||||||||||||| |||   ||| ||||||||||||||||||| ||||||    
T  25160877 attaagttggtttttgggc---tgtgttgtgctctttcggtggattggaggt 25160925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 38306225 - 38306382
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| |||||   ||||||| ||||||  |    
T  38306225 tctctggtgtacagggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagattgggagtcagttctttg--a 38306322  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | |||||||||||| ||| ||||| ||||||||||||| ||| |||||||| | ||||||    
T  38306323 ctcaagttggtttttgggc-tttgtgttgtgctctttcgatggttcggaggtcgcgaggtt 38306382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 203 - 377
Target Start/End: Original strand, 3867080 - 3867252
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||| |||||| ||||| |||||| ||||||| ||||| | |||||| | |||||||||||||| |||| |  ||||||| ||||||  |    
T  3867080 tctctggtgtaccgagggcgaagggtggcctgctaatttggtactaaaatatggtgggctgatcacttttgattcgagaccgggagtcagttctttg--a 3867177  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 377  Q
     | |||||||||||| |||||||| ||||||||||| ||||||||| ||||| | |||||| ||||| |||||||    
T  3867178 ctcaagttggtttttgggcttttgctttgtgctcttgcggtggatcagaggtcgcgaggttatggaaactgcatg 3867252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 10244146 - 10244303
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||| | |||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  10244146 tctctggtgtaccgggggagaggggtgccctgctaatttggtgctataatctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 10244243  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | ||||| | |||||||| ||||| |||||||||||| |||| |||||||| | ||||||    
T  10244244 ctcaagttag-tttttggcctttgtgttgtgctctttcagtggttcggaggtcgcgaggtt 10244303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 207 - 363
Target Start/End: Original strand, 37794957 - 37795110
Alignment:
Q  207 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaatta 306  Q
    |||||||||||||||||||||||||||||| |||||||  || ||| |||||| ||| ||| |||||||| ||||||  ||||||| ||||||  | | |    
T  37794957 tggtgtaccgggggcgaggggtgccctgctaatttggtaatatagtatggtgggccgttcagttttgattcgagatcgggagtcagttctttg--agtca 37795054  T
Q  307 agttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
    ||||||||||| ||| ||||| ||||||||||||||||| |||||||| | ||||||    
T  37795055 agttggtttttgggc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 37795110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 53 - 203
Target Start/End: Complemental strand, 42533663 - 42533509
Alignment:
Q  53 ggtgtttgttgg-ggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttc--atttttgggttgttaaggt 149  Q
    |||||||||| | |||||||||||||||||  ||| | |||||| |||||||||| ||||||||  | ||||||||||   |||||||||||||||||||    
T  42533663 ggtgtttgttagaggtgatttcttttggaggtagcatctgttactcgggtccatgttcgtcgtcattggctcttgtttgtgatttttgggttgttaaggt 42533564  T
Q  150 gtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgat 203  Q
    ||||| |||| |||||||| |||||| ||||||   |||||||||||||||||||    
T  42533563 gtttaaggtggttggaggaagcgtgtcccgttgttctgagccttttccttttgat 42533509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 203 - 377
Target Start/End: Original strand, 8745117 - 8745287
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||| |||| ||| |||||||| ||| |||||||||| ||||| |||||||| |||||||||||||||| ||||||  || |||| || ||||      
T  8745117 tctctggtgcaccgagggtgaggggtggccttctgatttggtcctaaattctggtgggccgatcacttttgattcgagatcgggattcagttcgttgg-- 8745214  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 377  Q
    || ||||| | |||| ||||||  || ||   |||||||||||||||||||| |||||||||||||| |||||||    
T  8745215 atcaagtttggttttgggcttt--ttatggtttctttcggtggatcggaggtcgagaggttgtggaagctgcatg 8745287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 53 - 200
Target Start/End: Original strand, 34389634 - 34389783
Alignment:
Q  53 ggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttg---ggttgttaaggt 149  Q
    ||||||||| ||||||||| ||||||||| | | || |||| | ||||||  || |||||||| |||||||| ||||  ||||||   ||||||||||||    
T  34389634 ggtgtttgtgggggtgattccttttggag-ctgactctgttgctcgggtcattgttcgtcgtcactagctctcgttttttttttgttgggttgttaaggt 34389732  T
Q  150 gtttagggtgtttggaggatgcgtgtccgttgcgatgagccttttcctttt 200  Q
    ||||||| |||||||||| ||||||| |||||||||| |||||||||||||    
T  34389733 gtttaggttgtttggagggtgcgtgttcgttgcgatgggccttttcctttt 34389783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 210 - 363
Target Start/End: Complemental strand, 5860398 - 5860248
Alignment:
Q  210 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagt 309  Q
    ||||||||||||||||||||||||||| ||||||| ||| |||| ||||| || ||| ||||||||| ||||||  ||||||  ||||||  |   ||||    
T  5860398 tgtaccgggggcgaggggtgccctgctaatttggtactatagtccggtgggcctatcgcttttgattcgagatcgggagtcaattctttg--acgcaagt 5860301  T
Q  310 tggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
    |||||||| ||| ||||| ||||||||||||||||| |||||||| | ||||||    
T  5860300 tggtttttgggc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 5860248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 47326310 - 47326141
Alignment:
Q  38 ttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 134  Q
    |||||||||||||  || | |||||| |||||||||| ||| ||  || ||||||||||||||||||||| |||||||  ||||||||||||  |  |||    
T  47326310 ttaggtgaggaggtgggcggttgttgtgggtgatttcctttagaagcaacctttgttacacgggtccatgttcgtcgttactagctcttgtttgtgcttt 47326211  T
Q  135 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 203  Q
    |||||| ||| |||| |||| || ||||||||| |||||||| ||||| | |||||||||||||||||||    
T  47326210 ttgggtggtttaggtatttacggagtttggagggtgcgtgtcacgttgtgttgagccttttccttttgat 47326141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 203 - 299
Target Start/End: Original strand, 16954617 - 16954713
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 299  Q
    ||||||||||| | | || |||||||||||| |||||||||| |||||||||||| ||||||||||||||| || |||||| | |||||| ||||||    
T  16954617 tctctggtgtatcagaggtgaggggtgcccttctgatttggtcctaaagtctggttgaccgatcacttttgtttcgagatcgaaagtcagttctttg 16954713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 42533369 - 42533289
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    ||||||||| | |||||| |||||||||||| |||||||||| |||||||||||||| | |||||||||||||| ||||||    
T  42533369 tctctggtgcatcgggggtgaggggtgccctcctgatttggtcctaaagtctggtgggctgatcacttttgattcgagatc 42533289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 53 - 203
Target Start/End: Complemental strand, 3420066 - 3419912
Alignment:
Q  53 ggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtg 150  Q
    |||| |||||||||||||||  ||||||  || ||| ||||||||||||||||| |||| ||| ||||||||||||  |  ||||||||| ||| |||||    
T  3420066 ggtgcttgttggggtgattttctttggaagcaacctctgttacacgggtccatgttcgttgtcactagctcttgtttgtgctttttgggtggtttaggtg 3419967  T
Q  151 tttagggtgtttggaggatgcgtgtc-cg-ttgcgatgagccttttccttttgat 203  Q
    |||| || ||||||||| |||||||| || ||| | |||||| ||||||||||||    
T  3419966 tttacggagtttggagggtgcgtgtcacgtttgtgttgagccctttccttttgat 3419912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 3478003 - 3478178
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt-tc 130  Q
    |||| ||||||||||| ||  ||||||| ||||||||||||  ||||||| || |||   |||||||||| |||  |||||||| ||||||||||||  |    
T  3478003 tgttgtttaggtgaggtggggggtgttttttggggtgattttatttggaggcatcctcaattacacgggttcatattcgtcgtcactagctcttgttggc 3478102  T
Q  131 atttttgggttgttaagg-tgtttagggtg-tttggaggatgcgtgtcc-gttgcgatgagccttttccttttgat 203  Q
     ||||||||||||||||| | ||| || || |||||||| |||||||||  ||| |||||||||||||||||||||    
T  3478103 gtttttgggttgttaaggtttttttggatgttttggagggtgcgtgtccttttgagatgagccttttccttttgat 3478178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 363
Target Start/End: Complemental strand, 44353623 - 44353524
Alignment:
Q  261 ccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 360  Q
    |||||||||||||||||||||||  ||||||| |||||| |  ||| |||||||||| |||||| || |||||||||||||||||||||||||| | |||    
T  44353623 ccgatcacttttgatttgagatcgggagtcagttctttgac--ttatgttggtttttgggcttt-gtgttgtgctctttcggtggatcggaggtcgcgag 44353527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 199
Target Start/End: Original strand, 16954304 - 16954474
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 129  Q
    |||| |||| |||||||||   ||||||||||||| ||||||| | ||||| ||| ||||||||| ||||| | || | |||||| ||| |||| ||||     
T  16954304 tgttgtttatgtgaggaggagagtgtttgttgggggtgatttcgtctggaggcagtctttgttactcgggtacttgtttgtcgtcactatctctagtttg 16954403  T
Q  130 catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttt 199  Q
    ||||||| | ||||||||||||||||||| ||||||||  ||| ||| ||||| | |||||||||||||||    
T  16954404 catttttcgattgttaaggtgtttagggtttttggaggtagcgggtctcgttgagttgagccttttccttt 16954474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 277
Target Start/End: Original strand, 44755591 - 44755664
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgattt 277  Q
    |||||||||||||| ||  |||||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  44755591 tctctggtgtaccgtggt-gaggggtgcccttctgatttggtcctaaagtctggtgggccgatcacttttgattt 44755664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 65 - 177
Target Start/End: Original strand, 9106852 - 9106964
Alignment:
Q  65 ggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttgg 164  Q
    ||||||||||||| ||| | |||| |||||  | |||||||  |||||||||||||||||||||| | |||| || ||||||||||||||||||| || |    
T  9106852 ggtgatttcttttagaggccgcctctgttattcaggtccattttcgtcgtcgctagctcttgtttgagttttagggtgttaaggtgtttagggtgctttg 9106951  T
Q  165 aggatgcgtgtcc 177  Q
    ||| || ||||||    
T  9106952 agggtgggtgtcc 9106964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 43 - 164
Target Start/End: Original strand, 1320455 - 1320580
Alignment:
Q  43 tgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatg-gtcgtcgtcgctagctcttgttt-cattttt--g 137  Q
    |||||||| ||||||||||||||| ||||||||||| ||| |||||| | |||||||||||| ||  |||||||| ||||||||||||| |||||||  |    
T  1320455 tgaggaggaaggtgtttgttgggggtgatttcttttagaggcagcctattttacacgggtccttgtttcgtcgtcactagctcttgtttgcattttttag 1320554  T
Q  138 ggttgttaaggtgtttagggtgtttgg 164  Q
    | ||||| ||||||||| |||||||||    
T  1320555 gattgtt-aggtgtttatggtgtttgg 1320580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 25160477 - 25160564
Alignment:
Q  42 gtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||||||||| ||||||||||||||||||||| ||   |  || ||| ||||||||||||||||| |||||||| |||||||||||||    
T  25160477 gtgaggaggcgggtgtttgttggggtgatttccttaaaaagcaacctatgttacacgggtccatgttcgtcgtcactagctcttgttt 25160564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 456 - 511
Target Start/End: Original strand, 34391427 - 34391482
Alignment:
Q  456 atactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 511  Q
    |||||||||||  |||||||||||||||||||||||| ||||||||||||||||||    
T  34391427 atactgtgtttagagtgttttgtttctattaaggtgttcgtcttaggtggtgatgt 34391482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 3478328 - 3478414
Alignment:
Q  215 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||| |||||||||||| ||| |||||| ||||||| |||||| |||||||||||||||| ||||||  |||| || ||||||||    
T  3478328 cgggggtgaggggtgcccttctgttttggtcctaaagtttggtgggccgatcacttttgattcgagatcgggagttagttctttggc 3478414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 6716853 - 6716755
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||||||||||| | | |||||||||||| |||||||  |  ||||||||||| | |||||||||||||||| ||||||  ||||||| ||||||||    
T  6716853 tctctggtgtaccgagagtgaggggtgcccttctgatttaatcataaagtctggttggccgatcacttttgattcgagatcgggagtcagttctttggc 6716755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 276
Target Start/End: Original strand, 1320758 - 1320831
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 276  Q
    |||||| |||| |||||| ||||||||||||  |||||||||  ||||||||||||| ||||||||||||||||    
T  1320758 tctctgatgtatcgggggtgaggggtgcccttttgatttggtcataaagtctggtgggccgatcacttttgatt 1320831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 53 - 205
Target Start/End: Original strand, 8744824 - 8744980
Alignment:
Q  53 ggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttca--tttttgggttgttaaggt 149  Q
    |||||||||||||| |||| ||||||||||    |||||||||| ||| ||| || |||||||| ||||| |||||||    ||||| ||||||||||||    
T  8744824 ggtgtttgttgggggtgatctcttttggaggtttcctttgttactcggttccttgttcgtcgtcactagcccttgtttgcgttttttcggttgttaaggt 8744923  T
Q  150 gtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgatct 205  Q
    ||||| | ||||||||||| ||| |||  |||| | |||||||| ||||||||||||    
T  8744924 gtttacgatgtttggaggaagcgagtcttgttgagttgagccttctccttttgatct 8744980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 292
Target Start/End: Original strand, 38485520 - 38485609
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 292  Q
    ||||||||| || |||||  ||||||||||| |||| || ||||| ||||||||||| |||||||||||||||| ||||||  |||||||    
T  38485520 tctctggtggactgggggtaaggggtgcccttctgaatttgttctgaagtctggtgggccgatcacttttgattcgagatcgggagtcag 38485609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 203 - 299
Target Start/End: Complemental strand, 16829053 - 16828957
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 299  Q
    ||||| ||||| | |||| |||||||||||| |||||||||| |||||||||||| | | ||||||||||| || |||||| | |||||| ||||||    
T  16829053 tctctagtgtatcaggggtgaggggtgcccttctgatttggtcctaaagtctggttggctgatcacttttgtttcgagatcgaaagtcagttctttg 16828957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 42 - 129
Target Start/End: Original strand, 10243848 - 10243935
Alignment:
Q  42 gtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    ||||| |||| | ||||||||||||||||||| ||| ||  || ||| |||||||||||| |||| |||||||| |||||||||||||    
T  10243848 gtgagaaggccgatgtttgttggggtgatttcctttagaagcaacctctgttacacgggtacatgttcgtcgtcactagctcttgttt 10243935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 53 - 199
Target Start/End: Original strand, 33434779 - 33434931
Alignment:
Q  53 ggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt----catttttgggttgttaag 147  Q
    |||||||||||||| ||||||| |||| || || ||| |||||| |||||| ||| |||||||| ||||||| |||||    | ||||||||| ||| ||    
T  33434779 ggtgtttgttgggggtgatttcctttgaaggcaacctctgttactcgggtctatgttcgtcgtcactagctcctgttttgtgcttttttgggtggtttag 33434878  T
Q  148 gtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttt 199  Q
    || |||||||||||||||||  ||| || |||||| |  ||||||||||||||    
T  33434879 gtatttagggtgtttggagggagcgggtcccgttgtgtcgagccttttccttt 33434931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 356
Target Start/End: Complemental strand, 46133395 - 46133244
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||| ||||| ||  ||| ||||||| |||||||||| || ||||||||||  |||||| ||||||||||||||||  ||||||| ||| |||      
T  46133395 tctctggtggaccggaggttaggagtgcccttctgatttggtgctgaagtctggtgagccgatcgcttttgatttgagatcgggagtcagttctctgg-- 46133298  T
Q  303 attaag-ttggttttttggcttttgttttgtgctctttcggtggatcggaggttg 356  Q
     | ||| ||||||||| ||||||| ||| ||| || ||||||||| |||||||||    
T  46133297 ttcaagtttggtttttgggctttt-tttggtgttccttcggtggaccggaggttg 46133244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 207 - 301
Target Start/End: Complemental strand, 24324911 - 24324817
Alignment:
Q  207 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||||||||||   ||||||||||| ||||||||||  |||||| |||||| ||||||| |||||||| ||||||  ||||||  ||||||||    
T  24324911 tggtgtaccggggtttaggggtgcccttctgatttggtcttaaagtttggtgggccgatcaattttgattcgagatcgggagtcaattctttggc 24324817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 377 - 511
Target Start/End: Complemental strand, 35745740 - 35745601
Alignment:
Q  377 gtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtgttg-tggatactgtgttttcag 470  Q
    |||||||||||||||||||||||| ||     ||||||||||| | || ||||||| ||| ||||| ||||||| |||  | |||||  |||||||  ||    
T  35745740 gtggctcagcttgggtgttgaagtctgactgttttattttgagaggtgttctttgggggtgagtagtgacgatgggtgggggtggatgttgtgttt--ag 35745643  T
Q  471 tgt-tttgtttctattaaggtgtccgtcttaggtggtgatgt 511  Q
    ||| ||||||||| |||||||||| |||||||||||||||||    
T  35745642 tgtgtttgtttctgttaaggtgtctgtcttaggtggtgatgt 35745601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 203
Target Start/End: Original strand, 37794657 - 37794826
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 134  Q
    |||| |||||||||  |||| |||||||||||||||| ||| ||  |  ||| ||||| || |||||||| |||||||| ||||||||||||  |  |||    
T  37794657 tttaagtgaggaggtgggtgcttgttggggtgatttcctttagaagcgacctctgttatacaggtccatgttcgtcgtcactagctcttgtttgtgcttt 37794756  T
Q  135 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 203  Q
    |||||| ||| ||||||||| || ||||| ||| || ||||| | ||| | ||||| |||||||||||||    
T  37794757 ttgggtggtttaggtgtttacggagtttgaagggtgtgtgtcacattgtgttgagcattttccttttgat 37794826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 203
Target Start/End: Original strand, 38305917 - 38306086
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttg--tttcattt 134  Q
    |||| |||||||||  | || |||||||||||||||| |||  | ||| ||| ||||||||||||||||| || ||||| ||||||||||  | |  |||    
T  38305917 tttaagtgaggaggtggatgcttgttggggtgatttcctttaaatacaacctctgttacacgggtccatgttcatcgtcactagctcttggttgtgcttt 38306016  T
Q  135 ttgggttgttaaggtgtttagggtgtttggaggatgcgtg-tccgttgcgatgagccttttccttttgat 203  Q
    |||||| ||| || |||||| || ||||||||| ||| ||   ||||| | |||||||||||||||||||    
T  38306017 ttgggtggtttagatgtttacggagtttggagggtgcttgcaacgttgtgttgagccttttccttttgat 38306086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 47457139 - 47457041
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    ||||||||| | ||||||  ||||||||||  |||||| ||| || ||||||| |||||||||| |||||||||||||||   ||||||| ||||||||    
T  47457139 tctctggtggatcgggggtaaggggtgcccgtctgattaggtcctgaagtctgatggaccgatcgcttttgatttgagattgggagtcagttctttggc 47457041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 203 - 300
Target Start/End: Original strand, 13311803 - 13311900
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    ||||||||| |||||||   ||||||||||  ||| ||||||  |  |||||||||| |||||||||||||||| ||||||  ||||||| |||||||    
T  13311803 tctctggtggaccggggataaggggtgcccgtctggtttggtcatgtagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg 13311900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 132 - 167
Target Start/End: Complemental strand, 6717059 - 6717024
Alignment:
Q  132 tttttgggttgttaaggtgtttagggtgtttggagg 167  Q
    |||||||||| |||||||||||||||||||||||||    
T  6717059 tttttgggtttttaaggtgtttagggtgtttggagg 6717024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 369
Target Start/End: Original strand, 36449176 - 36449210
Alignment:
Q  335 tctttcggtggatcggaggttgagaggttgtggaa 369  Q
    |||||||||||||||||||||||||||| ||||||    
T  36449176 tctttcggtggatcggaggttgagaggtggtggaa 36449210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 327 - 369
Target Start/End: Complemental strand, 48162020 - 48161978
Alignment:
Q  327 ttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
    ||||||||||||| |||||||| ||||| ||||||||||||||    
T  48162020 ttttgtgctcttttggtggatcagaggtcgagaggttgtggaa 48161978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Original strand, 25153231 - 25153264
Alignment:
Q  250 agtctggtggaccgatcacttttgatttgagatc 283  Q
    ||||||||||||||||||||||||||| ||||||    
T  25153231 agtctggtggaccgatcacttttgattcgagatc 25153264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 27993606 - 27993573
Alignment:
Q  250 agtctggtggaccgatcacttttgatttgagatc 283  Q
    ||||||||||||||||||||||||||| ||||||    
T  27993606 agtctggtggaccgatcacttttgattcgagatc 27993573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 247 - 283
Target Start/End: Original strand, 9349757 - 9349793
Alignment:
Q  247 taaagtctggtggaccgatcacttttgatttgagatc 283  Q
    ||||||||||||| |||||||||||||||| ||||||    
T  9349757 taaagtctggtgggccgatcacttttgattcgagatc 9349793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 23983286 - 23983326
Alignment:
Q  322 ttttgttttgtgctctttcggtggatcggaggttgagaggt 362  Q
    |||| ||||||| |||||||||| |||||||||||||||||    
T  23983286 tttttttttgtgttctttcggtgtatcggaggttgagaggt 23983326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 9e-62; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 203 - 378
Target Start/End: Complemental strand, 27031957 - 27031784
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||||||||  |||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||||| |||||||||||||||||     
T  27031957 tctctggtgtaccgggggaaaggggtgccctgctgatttggttctaaagtctagtgggccgatcacttttgattcgagatcgagagtcagctctttggc- 27031859  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 378  Q
     | |||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  27031858 -tcaagttggttttagggattttgttttgtgctctttcggtggatcggaggttgagaggttgtggaagctgcatgt 27031784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 203 - 364
Target Start/End: Complemental strand, 46814584 - 46814425
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||| ||||||     
T  46814584 tctctggtgtaccgggggcaaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctttttggc- 46814486  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttg 364  Q
     | |||||||||||||||||||||||||||||||||||||||||||||| || |||||||||    
T  46814485 -tcaagttggttttttggcttttgttttgtgctctttcggtggatcggatgtcgagaggttg 46814425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 203 - 369
Target Start/End: Original strand, 24658893 - 24659057
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||  ||||||||||||||||     
T  24658893 tctctggtgtatcgggggcaaggggtgccctgctgatttggttctaaagtctggtgggccaatcacttttgattcgagatcgggagtcagctctttggc- 24658991  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
     | |||||||||||| |||||| ||||||||||||||||||||||||||||| ||||||||||||||    
T  24658992 -tgaagttggtttttgggctttggttttgtgctctttcggtggatcggaggtcgagaggttgtggaa 24659057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 203 - 374
Target Start/End: Original strand, 7857617 - 7857786
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||  |||||| |||||| ||     
T  7857617 tctctggtgtactgggggcgaggggtgccctgctgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcaactcttttgc- 7857715  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgc 374  Q
     | |||||||||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||| ||||    
T  7857716 -tgaagttggtttttggccttttgttttgtgctctttcggtggatcggtggtcgagaggttgtggaagctgc 7857786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 203 - 369
Target Start/End: Complemental strand, 24684595 - 24684431
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||||||||||||||||||||| || ||||| |||||||||||||||| |||||||||||| ||| ||||||    ||||| ||||||  |    
T  24684595 tctctggtgtaccgggggcgaggggtgccctactaatttgattctaaagtctggtgggccgatcacttttaattcgagatcggatgtcagttctttg--a 24684498  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
     |  ||||||||||| |||||||||||||||||||||||||||||||||||| | ||||||||||||    
T  24684497 ctctagttggtttttgggcttttgttttgtgctctttcggtggatcggaggtcgcgaggttgtggaa 24684431  T

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Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 24450047 - 24449890
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||||||||||||||||||||||||  |||||| ||| ||| |||||| |||||||||||||||||||||||   |||||| |||||| |     
T  24450047 tctctggtgtaccgggggcgaggggtgccctgctattttggtactatagtttggtgggccgatcacttttgatttgagatcggaagtcagttctttgtc- 24449949  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     ||||||||| |||||||  ||||| ||||||||||| |||||||||||||| | ||||||    
T  24449948 -ttaagttgg-tttttgggatttgtgttgtgctcttttggtggatcggaggtcgcgaggtt 24449890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 30686021 - 30685864
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||| ||||| |||| |||||||||||||||||||||||  ||||||| ||||||  |    
T  30686021 tctctggtgtacctggggcgaggggtgccctgctaatttggtactatagtcttgtgggccgatcacttttgatttgagatcgggagtcagttctttg--a 30685924  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | ||||||| |||| ||| ||||| ||||||||||||||||| |||||||| | ||||||    
T  30685923 ctcaagttggcttttgggc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 30685864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 46692936 - 46692779
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||||||| ||||||||||| |||||||  || |||||||||| |||||||||||||||| ||||||  |||| || ||||||||     
T  46692936 tctctggtgtaccgggggcgagaggtgccctgctaatttggtgatatagtctggtgggccgatcacttttgattcgagatcgggagttagttctttggc- 46692838  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | |||||||||||| ||| ||||| ||||||||||||||||| |||||||| | ||||||    
T  46692837 -tcaagttggtttttgggc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 46692779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 32 - 154
Target Start/End: Original strand, 52278156 - 52278279
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt-tc 130  Q
    |||| ||||||||||||||||||||||||||||||||||||  |||||||  |||||||||| |||||||||||| |||||||  ||||||||||||  |    
T  52278156 tgttgtttaggtgaggaggcaggtgtttgttggggtgattttctttggaggaagcctttgtttcacgggtccatgttcgtcgttactagctcttgttggc 52278255  T
Q  131 atttttgggttgttaaggtgttta 154  Q
     |||||||||||||||||||||||    
T  52278256 gtttttgggttgttaaggtgttta 52278279  T

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Target: chr1; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 41920417 - 41920573
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||| |||| |||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  41920417 tctctggtgtactgggg-cgaggggtgccctgctaatttggtactacagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 41920513  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | ||||||| |||| ||| ||||| |||||||||||||||||||||||||| | ||||||    
T  41920514 ctcaagttggattttgggc-tttgtgttgtgctctttcggtggatcggaggtcgcgaggtt 41920573  T

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Target: chr1; HSP #11
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 5389538 - 5389381
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||||||||||||||| ||| ||||||| ||| ||||||  || |||||||||||||||| ||||||  ||||||| ||||||  |    
T  5389538 tctctggtgtaccgggggcgaggggtgcccagctaatttggtactatagtctgaagggccgatcacttttgattcgagatcgggagtcagttctttg--a 5389441  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | ||||| |||||| ||| ||||| ||||||||||||||||| |||||||| | ||||||    
T  5389440 ctcaagtttgtttttgggc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 5389381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 31585877 - 31585720
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||| | ||| ||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  31585877 tctctggtgtactgagggtgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 31585780  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | |||||||||||| ||| ||||| ||||||| ||||||||| |||||||| | ||||||    
T  31585779 ctcaagttggtttttgggc-tttgtgttgtgctatttcggtgggtcggaggtcgcgaggtt 31585720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 23 - 153
Target Start/End: Original strand, 16147210 - 16147341
Alignment:
Q  23 ggtggtagatgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagct 122  Q
    |||||| | |||| ||||||||||||||  ||||||  ||||||||||||| ||||||| |||||| ||||||||||| ||||| |||||||| ||||||    
T  16147210 ggtggttggtgttgtttaggtgaggaggtgggtgttgcttggggtgatttcctttggaggcagcctctgttacacgggcccatgttcgtcgtcactagct 16147309  T
Q  123 cttgttt-catttttgggttgttaaggtgttt 153  Q
    ||| ||| | ||||||||||||||||||||||    
T  16147310 cttatttgcgtttttgggttgttaaggtgttt 16147341  T

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Target: chr1; HSP #14
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 211 - 363
Target Start/End: Original strand, 5459133 - 5459282
Alignment:
Q  211 gtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagtt 310  Q
    |||||||||||||||||| ||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||  | ||||  | | |||||    
T  5459133 gtaccgggggcgaggggtaccctgctaatttggtgctatagtctggtgggccgatcacttttgattcgagatcgggagtcaattatttg--attcaagtt 5459230  T
Q  311 ggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
    | ||||| ||| ||||| |||||||||||| |||| |||||||||| ||||||    
T  5459231 gatttttgggc-tttgtgttgtgctctttcagtggttcggaggttgcgaggtt 5459282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 7857301 - 7857439
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttggggtgatttctttt-ggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 129  Q
    |||| |||||||||||||| |||| ||||||||||||| | ||||| |||| | | || |||||| |||||||||| |||||||| |||||||||||||     
T  7857301 tgttttttaggtgaggaggaaggtatttgttggggtgactcctttttggaggctggctctgttactcgggtccatgttcgtcgtcactagctcttgtttg 7857400  T
Q  130 cat-ttttgggttgttaaggtgtttagggtgtttggagg 167  Q
    | | ||| ||||||| |||||||||||||||||||||||    
T  7857401 cgtctttggggttgtcaaggtgtttagggtgtttggagg 7857439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 58 - 205
Target Start/End: Complemental strand, 30686308 - 30686158
Alignment:
Q  58 ttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttag 155  Q
    |||||||||||||||| ||| ||  |||| | ||||||||| ||||||| |||| ||| ||||||||||||  |  ||||||||| ||| |||||||||     
T  30686308 ttgttggggtgatttcctttagaagcagcatctgttacacgagtccatgttcgttgtcactagctcttgtttgtgctttttgggtggtttaggtgtttac 30686209  T
Q  156 ggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgatct 205  Q
    || ||||||||| | |||||| ||||| | |||||||||||||||||||||    
T  30686208 ggagtttggagggttcgtgtcacgttgtgttgagccttttccttttgatct 30686158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 375 - 511
Target Start/End: Complemental strand, 46814387 - 46814246
Alignment:
Q  375 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatg-agtgttgtggatactgtgttttc 468  Q
    ||||||||| || ||||||||||||||||     ||||||| ||||| || | ||||||||| ||||| ||||||| |  |||||||||||||||||| |    
T  46814387 atgtggctcggcgtgggtgttgaagtatgggagttttatttcgaggggtgttatttggaggtgagtagtgacgatggacggttgtggatactgtgtttac 46814288  T
Q  469 agtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 511  Q
    || |||| |||||| |||||||||| |||||||||||||||||    
T  46814287 agggttt-gtttctgttaaggtgtctgtcttaggtggtgatgt 46814246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 37 - 203
Target Start/End: Complemental strand, 31586186 - 31586016
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt---tcatt 133  Q
    |||| |||||||||  |||| |||||||||||||||| ||| ||   | ||| ||||||||||||||||| |||||||| || |||||||||   |  ||    
T  31586186 tttaagtgaggaggtgggtgcttgttggggtgatttcctttagaagaaacctctgttacacgggtccatgttcgtcgtcactggctcttgttttgtgctt 31586087  T
Q  134 tttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 203  Q
    ||||||| ||| |||||||||  | ||||||||| |||||||| ||||  | |||||||||||||||||||    
T  31586086 tttgggtggtttaggtgtttacagagtttggagggtgcgtgtcacgttatgttgagccttttccttttgat 31586016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 375 - 511
Target Start/End: Original strand, 7857814 - 7857954
Alignment:
Q  375 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 468  Q
    ||||||||||| |||||||||||||| ||     ||||||||||||| || ||| ||| ||| ||||| | ||||| ||| |||||||  | |||||| |    
T  7857814 atgtggctcagtttgggtgttgaagtctgggagttttattttgaggggtgttctatgggggtgagtagtggcgatgggtggttgtgga--ccgtgtttac 7857911  T
Q  469 agtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 511  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  7857912 agtgttttgtttctgttaaggtgtccgtcttaggtgatgatgt 7857954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 9313406 - 9313308
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    ||||| ||||| |||| | |||||||||||| |||||||||| ||||||||| |||| | |||||||||||||| ||||||  ||||||| ||||||||    
T  9313406 tctctcgtgtatcgggcgtgaggggtgcccttctgatttggtcctaaagtctagtgggctgatcacttttgattcgagatcgggagtcagttctttggc 9313308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 6583314 - 6583253
Alignment:
Q  222 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||||||||| ||||||    
T  6583314 gaggggtgcctttctgatttggtcctaaagtctggtggaccgatcacttttgattcgagatc 6583253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 20 - 177
Target Start/End: Complemental strand, 46814910 - 46814750
Alignment:
Q  20 gggggtggtagatgttatttaggtgaggaggcaggtgtttgttggggtgattt--cttttggagacagcctttgttacacgggtccatggtcgtcgtcgc 117  Q
    |||||||| ||| ||| |||||||||||| | ||||| |||||||  |  |||  | |||||||||| ||| | || |||||||||||| | |||||| |    
T  46814910 gggggtggcagacgttgtttaggtgaggaagtaggtgcttgttggtttttttttccctttggagacaacctctatttcacgggtccatgtttgtcgtcac 46814811  T
Q  118 tagctcttgttt-catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    | |||||||||  |  |||||||||||| |||||||||||||||||||||| |||||||||    
T  46814810 ttgctcttgttggcgcttttgggttgtttaggtgtttagggtgtttggagggtgcgtgtcc 46814750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 204
Target Start/End: Complemental strand, 10785748 - 10785582
Alignment:
Q  43 tgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggt--cgtcgtcgctagctcttgttt-catttttgg 138  Q
    |||||||||| |||||| |||||| ||||||||||||||| | |||| ||||||  |||||  ||||  ||||||| ||| | ||||||| |||||||||    
T  10785748 tgaggaggcaagtgtttattgggggtgatttcttttggaggctgcctctgttacttgggtct-tggtttcgtcgtcactaacccttgtttgcatttttgg 10785650  T
Q  139 g-ttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgatc 204  Q
    | ||||||||||||||||||||||||||||  ||  || || ||| | ||||||||||||||||||||    
T  10785649 ggttgttaaggtgtttagggtgtttggagggagcaggtcccattgagctgagccttttccttttgatc 10785582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 46693244 - 46693152
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||| |||||||||  ||||||||||||||||||||| ||| ||  || ||| |||||||||||| |||| |||||||| |||||||||||||    
T  46693244 tttaagtgaggaggtgggtgtttgttggggtgatttcctttagaagcaacctctgttacacgggtacatgttcgtcgtcactagctcttgttt 46693152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 37 - 176
Target Start/End: Complemental strand, 24450357 - 24450214
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt----cat 132  Q
    |||| ||||||||||  ||| |||||||||||||||| ||| ||  || ||||||||| | ||||||||| |||||||| |||||||||||||      |    
T  24450357 tttaagtgaggaggcgtgtgcttgttggggtgatttcctttagaagcaacctttgttaaatgggtccatgttcgtcgtctctagctcttgtttgtgcttt 24450258  T
Q  133 ttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc 176  Q
    |||||||| ||| ||||||||| || |||||| || ||||||||    
T  24450257 ttttgggtggtttaggtgtttacggagtttggggggtgcgtgtc 24450214  T

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Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 168
Target Start/End: Original strand, 27101966 - 27102089
Alignment:
Q  38 ttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcattttt 136  Q
    |||||||||||||| ||||| ||||| ||||  |||||||||||| | |||| |||||| ||||||| |  |||||||| | |||||||||||           
T  27101966 ttaggtgaggaggcgggtgtctgttgagggtattttcttttggaggcggcctctgttactcgggtccttcttcgtcgtcacgagctcttgttt------- 27102058  T
Q  137 gggttgttaaggtgtttagggtgtttggagga 168  Q
     |||||||||||||||||||||||||||||||    
T  27102059 -ggttgttaaggtgtttagggtgtttggagga 27102089  T

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Target: chr1; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 292
Target Start/End: Original strand, 4651744 - 4651833
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 292  Q
    ||||||||||||||||||  ||||||||||| |||| || ||||  |||||||| || |||||||||||||||| ||||||  |||||||    
T  4651744 tctctggtgtaccgggggtaaggggtgcccttctgaatttgttccgaagtctggggggccgatcacttttgattcgagatcgggagtcag 4651833  T

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Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 224 - 300
Target Start/End: Original strand, 17033571 - 17033647
Alignment:
Q  224 ggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    |||||||||| |||||||||| ||| |||||||||| |||||||||||||| | ||||||  ||||||| |||||||    
T  17033571 ggggtgcccttctgatttggtcctatagtctggtgggccgatcacttttgaatcgagatcgggagtcagttctttgg 17033647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 20113946 - 20113854
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||| ||||||||||  ||| |||||||||||||||| ||| ||  || ||| |||||||||||| |||| |||||||| |||||||||||||    
T  20113946 tttaagtgaggaggcgagtgcttgttggggtgatttcctttagaagcaacctatgttacacgggttcatgttcgtcgtctctagctcttgttt 20113854  T

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Target: chr1; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 215 - 275
Target Start/End: Original strand, 34774847 - 34774907
Alignment:
Q  215 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgat 275  Q
    |||||| ||| |||||||| |||||||||| |||| |||||||||||||||||||||||||    
T  34774847 cgggggtgagtggtgcccttctgatttggtcctaacgtctggtggaccgatcacttttgat 34774907  T

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Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 453 - 511
Target Start/End: Complemental strand, 27031677 - 27031620
Alignment:
Q  453 tggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 511  Q
    |||||||||||||| ||| |||| |||||| ||||||||||||||||||||||||||||    
T  27031677 tggatactgtgtttacagggttt-gtttctgttaaggtgtccgtcttaggtggtgatgt 27031620  T

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Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 20113638 - 20113565
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 276  Q
    |||| ||||||||||||||||||||||||||||| |||||||  || |||||| |||  |||||| ||||||||    
T  20113638 tctcgggtgtaccgggggcgaggggtgccctgctaatttggtattatagtctgctgggacgatcatttttgatt 20113565  T

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Target: chr1; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 299
Target Start/End: Original strand, 19598600 - 19598696
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 299  Q
    ||||||||| |||| |||  ||||||||||  ||| || ||| || ||||||||||| |||||| ||||||||| |||||| |||||||| ||||||    
T  19598600 tctctggtggaccgagggtaaggggtgcccgtctggttgggtcctgaagtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttg 19598696  T

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Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 404 - 511
Target Start/End: Original strand, 24659123 - 24659230
Alignment:
Q  404 tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttagg 502  Q
    ||||||||||||| || | ||||| ||| ||||| ||||||| ||| || ||| |||||||||| || ||||| |||||| ||||||||||| |||||||    
T  24659123 tttattttgaggggtgttatttgggggtgagtagtgacgatgggtggttatggttactgtgtttacaatgttt-gtttcttttaaggtgtccatcttagg 24659221  T
Q  503 tggtgatgt 511  Q
    |||| ||||    
T  24659222 tggttatgt 24659230  T

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Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 24684901 - 24684809
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||| |||||||||| |||| ||||||||||||| || ||||||  || ||| ||||||| |||||| || || ||||| |||||||||||||    
T  24684901 tttatgtgaggaggcgggtggttgttggggtgatgtcctttggaagcaacctatgttacatgggtccttgttcatcgtcactagctcttgttt 24684809  T

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Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 215 - 283
Target Start/End: Original strand, 40933839 - 40933907
Alignment:
Q  215 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    |||||| |||||||| ||| ||| |||||||| ||||| ||||| ||||||| ||||||||||||||||    
T  40933839 cgggggtgaggggtgtcctcctgttttggttcgaaagtttggtgaaccgatcgcttttgatttgagatc 40933907  T

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Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 41920137 - 41920228
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||| ||||||| ||||||| |||||||| ||||||| ||| ||  || ||| | ||||||||||||||| |||||||| |||||||||||||    
T  41920137 tttaagtgaggatgcaggtgcttgttggg-tgatttcctttagaagcaacctctattacacgggtccatgttcgtcgtcactagctcttgttt 41920228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 42 - 168
Target Start/End: Complemental strand, 9313649 - 9313517
Alignment:
Q  42 gtgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgt-ttcattttt--- 136  Q
    |||||||||  || ||||||||||| |||||||||||| || |||||||||||||  |||||| || | ||||||  |||||||||| | | |||||       
T  9313649 gtgaggaggagggcgtttgttgggggtgatttcttttgaaggcagcctttgttacttgggtccttgtttgtcgtcaatagctcttgtatgcgtttttttg 9313550  T
Q  137 -gggttgttaaggtgtttagggtgtttggagga 168  Q
     |||||| ||||||||||| |||||||||||||    
T  9313549 ggggttgctaaggtgtttatggtgtttggagga 9313517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 20 - 177
Target Start/End: Original strand, 24658566 - 24658725
Alignment:
Q  20 gggggtggtagatgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggt-cgtcgtcgct 118  Q
    |||||||| || |||  |||||||||||||   | || ||||||||||| |||| ||||||| || ||| |||| ||  |||||||| | ||||||| ||    
T  24658566 gggggtggcaggtgtcgtttaggtgaggagatggatgcttgttggggtgttttcctttggagccaacctctgtttcataggtccatgattcgtcgtcact 24658665  T
Q  119 agctcttgttt-catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
     |||||||||  |  |||||||||||| || ||||||||||||||||||| || ||||||    
T  24658666 tgctcttgttggcgcttttgggttgtttagatgtttagggtgtttggagggtgtgtgtcc 24658725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 64 - 162
Target Start/End: Original strand, 19598342 - 19598440
Alignment:
Q  64 gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgttt 162  Q
    |||||||| ||||||||||| |||| |||||  | |||||||  |||| |||||||  ||| |||| | |||||||| | |||||||||||||||||||    
T  19598342 gggtgattccttttggagaccgcctctgttattcaggtccatattcgttgtcgctacatctagtttgagttttgggtggctaaggtgtttagggtgttt 19598440  T

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Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 238 - 284
Target Start/End: Original strand, 27905411 - 27905457
Alignment:
Q  238 atttggttctaaagtctggtggaccgatcacttttgatttgagatca 284  Q
    |||||| | |||||||||||||||||||||||||||||| |||||||    
T  27905411 atttgggtttaaagtctggtggaccgatcacttttgattcgagatca 27905457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 203 - 369
Target Start/End: Original strand, 27102154 - 27102317
Alignment:
Q  203 tctctggtgtaccgggggcgagggg-tgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||||||||||| ||| |||||| |||||| ||| ||||||   |||||||   || |||||||||||||||| ||||||  ||||||| |||||||     
T  27102154 tctctggtgtaccgagggtgagggggtgcccttctgttttggtctcaaagtctaacgggccgatcacttttgattcgagatcgggagtcagttctttgg- 27102252  T
Q  302 aattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
     || ||||| | |||| ||||||  ||  |   |||||||||||||||||||| ||||||| ||||||    
T  27102253 -atcaagtttggttttgggcttt--ttacggtttctttcggtggatcggaggtcgagaggtggtggaa 27102317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 207 - 292
Target Start/End: Original strand, 42374131 - 42374216
Alignment:
Q  207 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 292  Q
    |||||||||| |||   |||||||||| ||||||||||  |   |||||||||||||||| ||||||||||||||||  |||||||    
T  42374131 tggtgtaccgagggtttggggtgcccttctgatttggtcatgttgtctggtggaccgatcgcttttgatttgagatcgggagtcag 42374216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 94 - 177
Target Start/End: Complemental strand, 27032231 - 27032147
Alignment:
Q  94 acacgggtccatggtcgtcgtcgctagctcttgtt-tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    |||||||||  || |||||||| || ||||||||| ||  |||||||||||| |||||| ||||||||||||||| || ||||||    
T  27032231 acacgggtctttgttcgtcgtcacttgctcttgttatcgcttttgggttgtttaggtgtgtagggtgtttggagggtgtgtgtcc 27032147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 38545080 - 38545017
Alignment:
Q  114 tcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    |||||||||||||||| | |||||||| |||||| ||||||||||| || |||| || ||||||    
T  38545080 tcgctagctcttgtttgagttttgggtcgttaagatgtttagggtgctttgagggtgtgtgtcc 38545017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 38544828 - 38544758
Alignment:
Q  230 ccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    |||| ||||||||||  | ||||||||||| |||||| ||||||||| ||||||  ||||||| |||||||    
T  38544828 cccttctgatttggtcatgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgg 38544758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 32864659 - 32864598
Alignment:
Q  222 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    |||||||||||| | |||||||| |||||| ||||||| || ||||||||| ||| ||||||    
T  32864659 gaggggtgcccttccgatttggtcctaaaggctggtgggccaatcacttttaattcgagatc 32864598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 64 - 152
Target Start/End: Original strand, 17033273 - 17033361
Alignment:
Q  64 gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtt 152  Q
    |||||||||||||||||| | |||| |||||   ||||||||  ||||||||| | ||| |||||| | ||||||||| || |||||||    
T  17033273 gggtgatttcttttggaggcggcctatgttatttgggtccattttcgtcgtcgttggctattgtttgagttttgggttattgaggtgtt 17033361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 41)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 203 - 369
Target Start/End: Complemental strand, 23328467 - 23328303
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||  |||| |||| ||||||     
T  23328467 tctctggtgtaccgggggcgaggggtgccctgttgatttggttctaaagtttggtggaccgatcacttttgattcgagatcgggagttagctttttggc- 23328369  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
     | ||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  23328368 -tcaagttggtttttgagcttttgttttgtgctctttcggtggatcggaggtcgagaggttgtggaa 23328303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 219 - 378
Target Start/End: Original strand, 45398776 - 45398933
Alignment:
Q  219 ggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggtttttt 318  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||||| |||||| |||||||||||||||  | ||||||||||||||     
T  45398776 ggcgaggggtgccctgctgatttggatttaaagtctggtggaccgatcacttttgattcgagatcgagagtcagctctttg--atttaagttggtttttg 45398873  T
Q  319 ggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 378  Q
    |||||||||||| |||||||||| |||||||||||| |||||||||||||| ||||||||    
T  45398874 ggcttttgttttatgctctttcgatggatcggaggtcgagaggttgtggaagctgcatgt 45398933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 203 - 378
Target Start/End: Complemental strand, 40023688 - 40023516
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||| |||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||  |||||   ||||||||     
T  40023688 tctctagtgtaccgggggcgaggg-tgccctgctgattttgttttaaagtctggtggaccgatcacttttgattcgagatcgggagtcgattctttggc- 40023591  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 378  Q
     |||||||||||||| |||||||||||||||||||||||||||||| ||||  | |||||||||||| ||||||||    
T  40023590 -ttaagttggtttttgggcttttgttttgtgctctttcggtggatcagaggacgggaggttgtggaagctgcatgt 40023516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 203 - 377
Target Start/End: Original strand, 19176467 - 19176638
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||| ||||||||| | ||||| ||||||||| |||||||||||||||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  19176467 tctctgatgtaccgggagtgaggg-tgccctgctaatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 19176563  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 377  Q
     | |||||||||||| |||||||| |||||||||||| |||||||||||||| |  ||||||||||| |||||||    
T  19176564 ctcaagttggtttttgggcttttgatttgtgctcttttggtggatcggaggtcgcaaggttgtggaagctgcatg 19176638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 204 - 363
Target Start/End: Complemental strand, 2392622 - 2392466
Alignment:
Q  204 ctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaa 303  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||||||||||||||||||| |||||    |||||| |||||| |      
T  2392622 ctctggtgtaccgggggcgaggggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagattggaagtcagttctttgtc-- 2392525  T
Q  304 ttaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||||||||| | ||||||    
T  2392524 ttaagttggtttttgggc-tttgtgttgtgctctttcggtggatcggaggtcgcgaggtt 2392466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 203 - 366
Target Start/End: Complemental strand, 9584170 - 9584009
Alignment:
Q  203 tctctggtgtaccgggggcgag-gggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    ||||| |||||||||||| ||| |||||||||||| ||||| | ||||||||||||||| ||||||||||||||| ||||||  ||||||| |||||| |    
T  9584170 tctcttgtgtaccggggg-gagagggtgccctgctaatttgatactaaagtctggtggatcgatcacttttgattcgagatcgggagtcagttctttgtc 9584072  T
Q  302 aattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtg 366  Q
      | ||| |||||||| ||||||||||||||| |||||||||||||||||||||| |||||||||    
T  9584071 --tcaagatggtttttgggcttttgttttgtgatctttcggtggatcggaggttgcgaggttgtg 9584009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 34475871 - 34475714
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||| |||||||||||||||| ||||||  ||||||  ||||  | |    
T  34475871 tctctggtgtaccgggggcgaggggtgccctgctaatttgtttctatagtctggtgggccgatcacttttgattcgagatcgggagtcaaatctt--gga 34475774  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
    ||||||||| ||||| ||| ||||| ||||||||||||||||||| |||||| | ||||||    
T  34475773 attaagttgatttttgggc-tttgtgttgtgctctttcggtggattggaggtcgcgaggtt 34475714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 20611747 - 20611904
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||||||||||||||||||| |||| || ||| ||| || ||| ||||||| |||||||| ||||||  ||||||| ||||||  |    
T  20611747 tctctggtgtaccgggggcgaggggtgccctgctaatttcgtactatagtttgttgggccgatcatttttgattcgagatcgggagtcagttctttg--a 20611844  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     |||||||||||||| ||| ||||  |||||||||||||||||||||||||| | ||||||    
T  20611845 cttaagttggtttttgggc-tttgcgttgtgctctttcggtggatcggaggtcgcgaggtt 20611904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 32 - 205
Target Start/End: Original strand, 37123040 - 37123218
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 129  Q
    |||| ||||||||||||||||||||||||||| ||||||||||||| |||| | |||| || ||| ||||||| || |||||||| |||||||||||||     
T  37123040 tgttgtttaggtgaggaggcaggtgtttgttgagggtgatttctttcggaggcggcctctggtactcgggtccttgttcgtcgtcactagctcttgtttg 37123139  T
Q  130 --catttttgggttgttaaggtgtttagggtgtttggaggatgcgtg-tccgttgcgatgagccttttccttttgatct 205  Q
        |||| |||||||||||| ||||||||||||||||||| ||| | ||| ||| | |||| ||||||||||||||||    
T  37123140 tgttttttggggttgttaaggagtttagggtgtttggaggaagcgggttccattgagttgagtcttttccttttgatct 37123218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 238 - 369
Target Start/End: Original strand, 43012374 - 43012503
Alignment:
Q  238 atttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctct 337  Q
    |||||||||||||||||||||| |||||||||||||||| ||||||  ||||||| ||||||  | | ||||||||||||  ||||||||||||||||||    
T  43012374 atttggttctaaagtctggtggcccgatcacttttgattcgagatcgggagtcagttctttg--actcaagttggtttttgagcttttgttttgtgctct 43012471  T
Q  338 ttcggtggatcggaggttgagaggttgtggaa 369  Q
    ||||||| ||| ||||| | ||||||||||||    
T  43012472 ttcggtgaatcagaggtcgcgaggttgtggaa 43012503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 53 - 200
Target Start/End: Complemental strand, 40023975 - 40023829
Alignment:
Q  53 ggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtt 152  Q
    ||||||||| ||||||||| ||||||||| | | || |||| | ||||||| || ||||| || |||||||| ||||  || ||||||||||||||||||    
T  40023975 ggtgtttgtgggggtgattccttttggag-ctgactctgttgctcgggtccttgttcgtcctcactagctctcgtttttttgttgggttgttaaggtgtt 40023877  T
Q  153 tagggtgtttggaggatgcgtgtccgttgcgatgagccttttcctttt 200  Q
    || |||||||||||| ||||||||||||| ||||||||||||||||||    
T  40023876 taaggtgtttggagggtgcgtgtccgttgtgatgagccttttcctttt 40023829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 47235366 - 47235541
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt-- 129  Q
    |||| |||| |||||||||  |||||| |||||||||||||| ||| ||  || ||||||||||||||||||||| || ||||| |||||||||||||      
T  47235366 tgttgtttaagtgaggaggtgggtgttggttggggtgatttcctttagaagcaacctttgttacacgggtccatgttcatcgtctctagctcttgtttgt 47235465  T
Q  130 -catttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 203  Q
       ||||||||| ||| ||||||||| || ||||||||| |||||||| ||||| | |||||||||||||||||||    
T  47235466 gtttttttgggtggtttaggtgtttacggagtttggagggtgcgtgtcacgttgtgttgagccttttccttttgat 47235541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 210 - 354
Target Start/End: Original strand, 45163824 - 45163967
Alignment:
Q  210 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtct--ggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaa 307  Q
    ||||||| ||||||||||||||||||| ||||||| ||| |||||   |||| |||||||||||||||| |||||||  |||||| | |||| |  ||||    
T  45163824 tgtaccgagggcgaggggtgccctgctaatttggtactatagtcttgtgtgggccgatcacttttgattcgagatcagaagtcagttttttgtc--ttaa 45163921  T
Q  308 gttggttttttggcttttgttttgtgctctttcggtggatcggaggt 354  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||||    
T  45163922 gttggtttttgggc-tttgtgttgtgctctttcggtggatcggaggt 45163967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 2394369 - 2394291
Alignment:
Q  204 ctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagat 282  Q
    ||||||||||||||||||||||||||||||||| ||||||| ||| || |||||||||||||||||||||||| |||||    
T  2394369 ctctggtgtaccgggggcgaggggtgccctgctaatttggtactatagcctggtggaccgatcacttttgattcgagat 2394291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 37 - 202
Target Start/End: Original strand, 25647336 - 25647507
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggg--gtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcat 132  Q
    ||||||||||||||| |||||||  ||||  ||||||  ||| ||||   ||||||||||| ||||||| || |||||||| ||||||||||||  | ||    
T  25647336 tttaggtgaggaggcgggtgttttgtgggtggtgattcatttgggaggttgcctttgttactcgggtccttgttcgtcgtcactagctcttgttcgtgat 25647435  T
Q  133 ttttg-ggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttga 202  Q
    ||||  ||||||||||||||||||||||||||||||| ||| || |||||| | || |||||||||||||||    
T  25647436 ttttaaggttgttaaggtgtttagggtgtttggaggaagcgagtcccgttgagttgtgccttttccttttga 25647507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 207 - 282
Target Start/End: Original strand, 14193908 - 14193983
Alignment:
Q  207 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagat 282  Q
    |||||||||||| | |||||||||||| |||||||||| ||||||||||| ||||||||||||||||||| |||||    
T  14193908 tggtgtaccgggagtgaggggtgcccttctgatttggtcctaaagtctggcggaccgatcacttttgattcgagat 14193983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 406 - 511
Target Start/End: Original strand, 45398993 - 45399099
Alignment:
Q  406 tattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtg 504  Q
    ||||||| ||| || || |||| ||| ||||| |||||||  || ||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||    
T  45398993 tattttgtggggtgttcgttgggggtgagtagtgacgatggatgattgtggatattgtgtttacagtgttttgtttctgttaaggtgtccgtcttaggtg 45399092  T
Q  505 gtgatgt 511  Q
    |||||||    
T  45399093 gtgatgt 45399099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 375 - 509
Target Start/End: Complemental strand, 23328270 - 23328131
Alignment:
Q  375 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 468  Q
    |||||||||||||||||||||||||| ||     ||||||||||| | || ||||||| ||| ||||| ||||||| ||| ||||||||| |||| || |    
T  23328270 atgtggctcagcttgggtgttgaagtctgggagttttattttgagtggtgttctttgggggtgagtagtgacgatgggtggttgtggatattgtgcttac 23328171  T
Q  469 agtgttttgtttctattaaggtgtccgtcttaggtggtgat 509  Q
    ||||||| |||||| |||||  |||||||||||||||||||    
T  23328170 agtgttt-gtttctgttaagaggtccgtcttaggtggtgat 23328131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 38 - 203
Target Start/End: Original strand, 20611439 - 20611608
Alignment:
Q  38 ttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 134  Q
    ||||||||||| | ||||| |||||  |||||||||| ||| ||  || ||| ||||||||||||||||| | |||||  ||||||||||||  |  |||    
T  20611439 ttaggtgaggatgtaggtggttgttatgggtgatttcctttagaagcaacctctgttacacgggtccatgtttgtcgttactagctcttgtttgtgcttt 20611538  T
Q  135 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 203  Q
    |||||| ||| ||||||||| |  ||||||||| |||||||| ||||| | |||||||||||||||||||    
T  20611539 ttgggtagtttaggtgtttacgaagtttggagggtgcgtgtcacgttgtgttgagccttttccttttgat 20611608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 449 - 511
Target Start/End: Complemental strand, 40023412 - 40023350
Alignment:
Q  449 gttgtggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 511  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  40023412 gttgtggataccgtgtttacagtgttttgtttctgttaaggtgtctgtcttaggtggtgatgt 40023350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 309 - 374
Target Start/End: Original strand, 21342603 - 21342668
Alignment:
Q  309 ttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgc 374  Q
    ||||||||| ||||||||||||||||||||||| |||||| ||||| |||||||||||||| ||||    
T  21342603 ttggtttttaggcttttgttttgtgctctttcgatggatcagaggtcgagaggttgtggaagctgc 21342668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 45163504 - 45163596
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||| |||||||||| ||||| ||||||||||||||| ||| ||  ||  |||||||||||||||||||| |||||||| ||| |||||||||    
T  45163504 tttaagtgaggaggcgggtgtatgttggggtgatttcctttagaagcaatctttgttacacgggtccatgttcgtcgtctctaactcttgttt 45163596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 85 - 203
Target Start/End: Original strand, 14193641 - 14193763
Alignment:
Q  85 gcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattttt-gggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgtt 180  Q
    ||||||||||| ||||||| |  |||||||| ||||||||||||    |||||| |||||||||||||||||||||| ||||||||| ||| || |||||    
T  14193641 gcctttgttactcgggtccttattcgtcgtcactagctcttgttcgcgatttttggggttgttaaggtgtttagggtttttggaggaagcgagtcccgtt 14193740  T
Q  181 gcgatgagccttttccttttgat 203  Q
    | | || ||||||||||||||||    
T  14193741 gagttgtgccttttccttttgat 14193763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 250 - 363
Target Start/End: Original strand, 17550968 - 17551078
Alignment:
Q  250 agtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcg 349  Q
    |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  | | |||||||||||| ||| ||||| ||||||||||||| || ||||    
T  17550968 agtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--actcaagttggtttttgggc-tttgtgttgtgctctttcgatgcatcg 17551064  T
Q  350 gaggttgagaggtt 363  Q
    ||||| | ||||||    
T  17551065 gaggtcgcgaggtt 17551078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 42 - 176
Target Start/End: Complemental strand, 34476173 - 34476037
Alignment:
Q  42 gtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttggg 139  Q
    |||||||||  ||||||||||||||||||||| ||   |  || ||| ||||||||||||||||| |||||||| ||||||||||||  |  |||||| |    
T  34476173 gtgaggaggggggtgtttgttggggtgatttccttaaaaagcaacctatgttacacgggtccatgttcgtcgtctctagctcttgtttgtgctttttgag 34476074  T
Q  140 ttgttaaggtgtttagggtgtttggaggatgcgtgtc 176  Q
    | ||| ||||||||| || ||||||||| || |||||    
T  34476073 tggtttaggtgtttacggagtttggagggtgggtgtc 34476037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 25647648 - 25647728
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    |||||||||||||||| | || ||||||||| |||||||||| ||||||||||  || || ||||||||||||| ||||||    
T  25647648 tctctggtgtaccgggagtgaagggtgcccttctgatttggtcctaaagtctgacgggcctatcacttttgattcgagatc 25647728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 225 - 283
Target Start/End: Original strand, 14879421 - 14879479
Alignment:
Q  225 gggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    ||||||||| |||||| ||| |||||||||||||| |||||||||||||||| ||||||    
T  14879421 gggtgcccttctgattgggtcctaaagtctggtgggccgatcacttttgattcgagatc 14879479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 223 - 363
Target Start/End: Original strand, 31482868 - 31483005
Alignment:
Q  223 aggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggct 322  Q
    |||||| |||| || ||||||||||| ||||||| || | |||||||||||||| ||||||  || |||  ||||    |||||||||| ||||| ||||    
T  31482868 aggggtaccctactaatttggttctatagtctggcgggcggatcacttttgattcgagatcgggaatcaaatcttaa--aattaagttgatttttgggct 31482965  T
Q  323 tttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
    || || ||||||||||||||||||| |||||| | ||||||    
T  31482966 tt-gtgttgtgctctttcggtggattggaggtcgcgaggtt 31483005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 67 - 167
Target Start/End: Complemental strand, 1653276 - 1653176
Alignment:
Q  67 tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggag 166  Q
    |||||||| ||||||   |||| |||||  |||||||||  |||| ||||||||||||||||| | |||| |||||||| ||||||||| |||||| |||    
T  1653276 tgatttctattggaggttgcctctgttattcgggtccatactcgttgtcgctagctcttgtttgagttttaggttgttatggtgtttagagtgttttgag 1653177  T
Q  167 g 167  Q
    |    
T  1653176 g 1653176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 19176159 - 19176251
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||| ||| |||||| |||| |||||||||||||||| ||||||   | |||||||||||||||||  || || ||||| |||||||||||||    
T  19176159 tttaagtgtggaggcgggtgcttgttggggtgatttcctttggaagtaacctttgttacacgggtctttgttcatcgtcactagctcttgttt 19176251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 300
Target Start/End: Complemental strand, 14755380 - 14755285
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    ||||||||||||||  || ||||||||||||  |  ||| || |||||||||||||| ||||||||||||||||  |||||  ||||||| |||||||    
T  14755380 tctctggtgtaccgaaggtgaggggtgccctttt--ttttgtgctaaagtctggtgggccgatcacttttgattcaagatcgggagtcagttctttgg 14755285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 30935507 - 30935434
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 276  Q
    ||||||||| ||||||||  ||||||||||| ||||||||||| | |||| |||||| | |||| |||||||||    
T  30935507 tctctggtggaccgggggtaaggggtgcccttctgatttggttttgaagtttggtgggctgatcgcttttgatt 30935434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 203 - 300
Target Start/End: Original strand, 37123346 - 37123443
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    |||||| |||||||  || ||||||||||||  || |||||| ||||| | |||||| |||||||||||||||| |||||   ||||||| |||||||    
T  37123346 tctctgatgtaccgaaggagaggggtgcccttatgttttggtcctaaattttggtgggccgatcacttttgattcgagattgggagtcagttctttgg 37123443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 2394683 - 2394591
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||| |||||||||| |||| |||||||||||||||| ||  ||  || ||||||||||| ||||||||  | |||||| ||| |||||||||    
T  2394683 tttaagtgaggaggcgggtgcttgttggggtgatttccttaagaagcaacctttgttacatgggtccatatttgtcgtctctaactcttgttt 2394591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 33144020 - 33143969
Alignment:
Q  249 aagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    |||||||||||| ||||||||||||||| ||||||  ||||||| |||||||    
T  33144020 aagtctggtggatcgatcacttttgattcgagatcgggagtcagttctttgg 33143969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 47945669 - 47945768
Alignment:
Q  203 tctctggtgtacc-gggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    ||||||||| ||| |||||  ||||||||||  ||| || ||| |||||||| ||||| |||||||||||||||| ||||||  ||||||| | ||||||    
T  47945669 tctctggtggaccagggggtaaggggtgcccgtctggttgggtcctaaagtccggtgggccgatcacttttgattcgagatcgggagtcagttatttggc 47945768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 355
Target Start/End: Complemental strand, 1652971 - 1652855
Alignment:
Q  235 ctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgc 334  Q
    |||||||||| || || ||| |||| |||||||||||||||| ||||||| |||| || |||||||   | ||||| | |||| ||||||  ||| |||     
T  1652971 ctgatttggtcctgaactcttgtgggccgatcacttttgattcgagatcaggagttagttctttgg--ttcaagtttggttttgggcttt--tttggtgt 1652876  T
Q  335 tctttcggtggatcggaggtt 355  Q
    |||||||||||| ||||||||    
T  1652875 tctttcggtggaccggaggtt 1652855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 209 - 243
Target Start/End: Original strand, 47235686 - 47235720
Alignment:
Q  209 gtgtaccgggggcgaggggtgccctgctgatttgg 243  Q
    |||||||||||||||||||||||||||| ||||||    
T  47235686 gtgtaccgggggcgaggggtgccctgctaatttgg 47235720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 270 - 363
Target Start/End: Original strand, 47235729 - 47235819
Alignment:
Q  270 tttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
    ||||||| |||||| |||||| | |||||| |  |||||||||||||| |||||| || || ||||||||||||||||| ||||| | ||||||    
T  47235729 tttgattcgagatcgagagtcggttctttgac--ttaagttggtttttgggcttt-gtgttttgctctttcggtggatcagaggtcgcgaggtt 47235819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 32 - 77
Target Start/End: Complemental strand, 4464368 - 4464323
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttggggtgatttctttt 77  Q
    |||| |||||||||| |||| |||||||| ||||||||||||||||    
T  4464368 tgttgtttaggtgagtaggcgggtgtttgatggggtgatttctttt 4464323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 470 - 507
Target Start/End: Complemental strand, 50305396 - 50305359
Alignment:
Q  470 gtgttttgtttctattaaggtgtccgtcttaggtggtg 507  Q
    ||||||||||||| ||||||||| ||||||||||||||    
T  50305396 gtgttttgtttctgttaaggtgttcgtcttaggtggtg 50305359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 108; Significance: 5e-54; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 203 - 369
Target Start/End: Complemental strand, 15821496 - 15821332
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||| ||||||  ||||||||||||||  |    
T  15821496 tctctggtgtaccgagggcgaggggtgccctgctgatttggttctaaagtctggtgggctgatcacttttgattcgagatcgggagtcagctctttg--a 15821399  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
     ||| |||||||||| |||||||||||||||||||||| ||||||| ||||| ||||||||||||||    
T  15821398 cttatgttggtttttgggcttttgttttgtgctctttcagtggatcagaggtcgagaggttgtggaa 15821332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 207 - 377
Target Start/End: Original strand, 36630805 - 36630973
Alignment:
Q  207 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaatta 306  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| ||||||  | ||||| ||||||  | |      
T  36630805 tggtgtaccgggggcgaggggtgccctgctaatttggttctaaagtctggtgggccgatcacttttaattcgagatcgggtgtcagttctttg--actct 36630902  T
Q  307 agttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 377  Q
    |||| |||||| ||||||||||||||||||||||| |||||||||||| | |||||||||| | |||||||    
T  36630903 agtttgtttttgggcttttgttttgtgctctttcgatggatcggaggtcgcgaggttgtgggagctgcatg 36630973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 34389122 - 34388965
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||| |||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||||||||||| ||||||  |    
T  34389122 tctctggtgtaccaggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcaagagtcagttctttg--a 34389025  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | |||||||||||| ||| ||||| ||||||| ||||||||||||| |||| | ||||||    
T  34389024 ctcaagttggtttttgggc-tttgtgttgtgctatttcggtggatcgtaggtcgtgaggtt 34388965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 32066412 - 32066255
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||| |||||||||||||||||||||||||||| ||||||| ||| |||||||||| |||||||||||||||| || |||  ||||||||||||||  |    
T  32066412 tctctagtgtaccgggggcgaggggtgccctgctaatttggtgctatagtctggtgggccgatcacttttgattcgaaatcgggagtcagctctttg--a 32066315  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     |  ||||||||||| ||| ||||| ||||||||||||||||| || ||||||| ||||||    
T  32066314 ctccagttggtttttgggc-tttgtgttgtgctctttcggtggttcagaggttgcgaggtt 32066255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 203 - 356
Target Start/End: Original strand, 9519463 - 9519613
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||| ||||||||||||||| ||||||| ||| ||||| |||| ||||||| |||||||| ||||||  ||||||| ||||||  |    
T  9519463 tctctggtgtaccgggggtgaggggtgccctgctaatttggtactatagtctagtgggccgatcagttttgattcgagatcgggagtcagttctttg--a 9519560  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttg 356  Q
     | |||||||||||| ||| ||||| ||||||||||||||||| ||||||||||    
T  9519561 ctcaagttggtttttgggc-tttgtgttgtgctctttcggtgggtcggaggttg 9519613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 37986975 - 37986818
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||||||||||||||||||| |||||||  || |||||||||| || |||| |||||||| ||||||  ||||||| ||||||  |    
T  37986975 tctctggtgtaccgggggcgaggggtgccctgctaatttggtgttatagtctggtgggccaatcatttttgattcgagatcgggagtcagttctttg--a 37986878  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | ||||||||||||  || ||||| ||||||||||||||||| |||||||| | ||||||    
T  37986877 ctcaagttggtttttgtgc-tttgtgttgtgctctttcggtggttcggaggtcgcgaggtt 37986818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 24995512 - 24995355
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||| |||||||||||||| | |||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  24995512 tctctggtgtactgggggcgaggggtgtcttgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 24995415  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | |||||||||||| ||| ||||| |||||||||||| |||| || ||||| | ||||||    
T  24995414 ctcaagttggtttttgggc-tttgtgttgtgctctttcagtgggtcagaggtcgcgaggtt 24995355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 203 - 363
Target Start/End: Complemental strand, 31207478 - 31207322
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||| |||||||||| ||||||||| ||||||| ||| |||||||||| |||||||||||||||| ||||||  ||||||| ||||||  |    
T  31207478 tctctggtgtaccaggggcgaggg-tgccctgctaatttggtactatagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttg--a 31207382  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | |||||||  ||||||  ||||| ||||||| |||||||||||||||||| | ||||||    
T  31207381 ctcaagttgg-attttgggatttgtgttgtgctttttcggtggatcggaggtcgcgaggtt 31207322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 10248982 - 10248845
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttca 131  Q
    |||| ||||||||||||||  |||||||| |||||||||||||| |||||   | |  |||||| ||||||| |  |||||||| ||||||||||||| |    
T  10248982 tgttgtttaggtgaggaggagggtgtttgctggggtgatttcttctggaggttgtcgctgttactcgggtccttattcgtcgtcactagctcttgtttga 10248883  T
Q  132 --tttttgggttgttaaggtgtttagggtgtttggagg 167  Q
      ||||||| ||||||||||||||| ||||||||||||    
T  10248882 gttttttggattgttaaggtgtttaaggtgtttggagg 10248845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 304 - 378
Target Start/End: Complemental strand, 38577808 - 38577734
Alignment:
Q  304 ttaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 378  Q
    |||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||    
T  38577808 ttaagttggtttttggacttttgttttgtgctctttcggtggatcagaggtcgagagtttgtggaagctgcatgt 38577734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 30 - 168
Target Start/End: Complemental strand, 17657438 - 17657297
Alignment:
Q  30 gatgttatttaggtgaggaggcaggtgtttgttgg-ggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt 128  Q
    |||||| ||||||||||||||| | |||| ||||| |||||||| |||||||| | |||| |||||  ||||||| || | || ||| ||||||||||||    
T  17657438 gatgttgtttaggtgaggaggcggatgttcgttggaggtgatttgttttggaggctgcctctgttattcgggtccttgtttgttgtcactagctcttgtt 17657339  T
Q  129 t-catttttgggt-tgttaaggtgtttagggtgtttggagga 168  Q
    | ||||||||||  |||||||||||||| |||||||||||||    
T  17657338 tgcatttttgggactgttaaggtgtttatggtgtttggagga 17657297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 450 - 511
Target Start/End: Complemental strand, 38577628 - 38577567
Alignment:
Q  450 ttgtggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 511  Q
    ||||||||||||||||| ||||||||||||| |||| |||||||||||||||||||||||||    
T  38577628 ttgtggatactgtgtttacagtgttttgtttatatttaggtgtccgtcttaggtggtgatgt 38577567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 34389403 - 34389311
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||| |||||||||| |||| |||||||||||||||| ||| ||  || ||| ||||||||||||||||| |||||||| |||||||||||||    
T  34389403 tttaagtgaggaggcgggtgcttgttggggtgatttcctttagaagcaacctctgttacacgggtccatgttcgtcgtcactagctcttgttt 34389311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 37 - 129
Target Start/End: Original strand, 36630493 - 36630585
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||| |||||||||| |||| |||||||||||||||| ||||||  || ||| |||||||||||||| || |||||||| |||||||||||||    
T  36630493 tttatgtgaggaggcgggtgcttgttggggtgatttcctttggaagcaacctctgttacacgggtccttgttcgtcgtcactagctcttgttt 36630585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 261 - 363
Target Start/End: Original strand, 20138448 - 20138547
Alignment:
Q  261 ccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagag 360  Q
    |||||||||||||||||||||||  ||||||| |||||| |  ||| |||||||||| |||||| || |||||||||||||||||||||||||| | |||    
T  20138448 ccgatcacttttgatttgagatcgggagtcagttctttgac--ttatgttggtttttgggcttt-gtgttgtgctctttcggtggatcggaggtcgcgag 20138544  T

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Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 10248670 - 10248572
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||||||||||||||| |||||||| ||| || |||| || ||||| | |||||||||||||||||||||||  |||||  ||||||| ||||||||    
T  10248670 tctctggtgtaccgggggtgaggggtgtccttctaattttgtcctaaaatttggtggaccgatcacttttgattcaagatcgggagtcagttctttggc 10248572  T

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Target: chr8; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 218 - 351
Target Start/End: Complemental strand, 16457562 - 16457433
Alignment:
Q  218 gggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttt 317  Q
    |||||||||||| |||||| ||||| | ||| ||| |||||| |||||||||||||||| ||||||  ||||||| ||||||  | | ||||||||||||    
T  16457562 gggcgaggggtgtcctgctaatttgatactatagtttggtgg-ccgatcacttttgattcgagatcgggagtcagttctttg--actcaagttggttttt 16457466  T
Q  318 tggcttttgttttgtgctctttcggtggatcgga 351  Q
     ||| ||||| ||||||||||||||||| |||||    
T  16457465 aggc-tttgtgttgtgctctttcggtggttcgga 16457433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 30 - 177
Target Start/End: Complemental strand, 15821812 - 15821663
Alignment:
Q  30 gatgttatttaggtgaggaggcaggtgtttgttggggtgatttc-ttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt 128  Q
    |||||| ||||||||||||||| ||||||||||||||||||||| |||||||| |||||| | || || ||||||||  | |||||| |  |||||||||    
T  15821812 gatgttgtttaggtgaggaggcgggtgtttgttggggtgatttctttttggaggcagcctctatttcatgggtccatatttgtcgtcacgtgctcttgtt 15821713  T
Q  129 -tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
      |  ||||| |||||| ||||| | ||| |||||||||| |||||||||    
T  15821712 ggcgcttttgagttgtttaggtgctaaggttgtttggagggtgcgtgtcc 15821663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 203 - 300
Target Start/End: Complemental strand, 30236245 - 30236148
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    ||||||||| ||||||||  ||||||||||| ||||||||||| | |||||||||||  ||||| ||||||||| ||||||  ||||||| |||||||    
T  30236245 tctctggtggaccgggggtaaggggtgcccttctgatttggttttgaagtctggtgggacgatcgcttttgattcgagatcgggagtcagttctttgg 30236148  T

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Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 37 - 203
Target Start/End: Complemental strand, 37987284 - 37987114
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 134  Q
    |||| |||| ||||| ||||||||||||||||||||| ||| ||  || | ||||||||| |||| |||| |||||||| ||||||||||||  |  |||    
T  37987284 tttaagtgaagaggcgggtgtttgttggggtgatttcctttagaagcaacttttgttacatgggtacatgttcgtcgtcactagctcttgtttgtgtttt 37987185  T
Q  135 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcg-atgagccttttccttttgat 203  Q
    | |||| ||| ||||||||| || ||| ||||| |||||||| ||||| |  ||||||||||| |||||||    
T  37987184 tcgggtggtttaggtgtttacggagttaggagggtgcgtgtcacgttgtgtttgagccttttctttttgat 37987114  T

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Target: chr8; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 129
Target Start/End: Complemental strand, 32066720 - 32066628
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||| |||||||||  ||||||||||||||||||||| ||| ||  || ||| ||||||| |||| |||| |||||||| |||||||||||||    
T  32066720 tttaagtgaggaggtgggtgtttgttggggtgatttcctttagaagcaacctctgttacatgggtacatgttcgtcgtcactagctcttgttt 32066628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 408 - 510
Target Start/End: Complemental strand, 35816128 - 35816026
Alignment:
Q  408 ttttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttcagtgttttgtttctattaaggtgtccgtcttaggtggt 506  Q
    ||||||||| || ||||||| ||| ||||| || |||| ||| ||||||||||||||||| || || ||||||||| |||||||||| |||||| |||||    
T  35816128 ttttgaggggtgttctttgggggtgagtagtgatgatgggtggttgtggatactgtgtttacaatg-tttgtttctgttaaggtgtctgtcttaagtggt 35816030  T
Q  507 gatg 510  Q
    ||||    
T  35816029 gatg 35816026  T

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Target: chr8; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 327 - 378
Target Start/End: Complemental strand, 35816238 - 35816187
Alignment:
Q  327 ttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 378  Q
    ||||||||||||| |||||||||||||||||||| |||||||| ||||||||    
T  35816238 ttttgtgctcttttggtggatcggaggttgagagattgtggaagctgcatgt 35816187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 375 - 511
Target Start/End: Complemental strand, 15821299 - 15821157
Alignment:
Q  375 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 468  Q
    ||||||||||||| || ||||||||| ||     ||||||||||||  || ||||| |  || ||||| | ||||||||| ||||||||  ||||||| |    
T  15821299 atgtggctcagctcggatgttgaagtctgggagttttattttgaggagtgttcttttggagtgagtagtggcgatgagtggttgtggattttgtgtttac 15821200  T
Q  469 agtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 511  Q
      |||||||||||| |||||||||| |||||||||||||||||    
T  15821199 cttgttttgtttctgttaaggtgtctgtcttaggtggtgatgt 15821157  T

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Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 276
Target Start/End: Original strand, 10552233 - 10552305
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 276  Q
    ||||||||  ||| ||||| ||||||||||| ||||||||||||| ||||||||||| |||||| |||||||||    
T  10552233 tctctggtagaccaggggcaaggggtgccct-ctgatttggttctgaagtctggtgggccgatcgcttttgatt 10552305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 165
Target Start/End: Complemental strand, 24995817 - 24995690
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 134  Q
    |||| |||||||||  |||| |||||||||||||||  ||| ||  || ||| |||||||||||||||||||   |||| ||||||||||||  |  |||    
T  24995817 tttaagtgaggaggtgggtgcttgttggggtgattttctttagaagcaacctctgttacacgggtccatggt---cgtcactagctcttgttagtgcttt 24995721  T
Q  135 ttgggttgttaaggtgtttagggtgtttgga 165  Q
    |||||| ||| ||||||||| || |||||||    
T  24995720 ttgggtggtttaggtgtttacggagtttgga 24995690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 30236490 - 30236377
Alignment:
Q  64 gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttg 163  Q
    ||||||||||| |||||| | |||| ||||   ||||| |||  |||| ||||||||||||| ||| | || |||||||| |||||||||||||| |||     
T  30236490 gggtgatttctattggaggccgcctctgtttttcgggttcatactcgttgtcgctagctcttatttgagttgtgggttgtcaaggtgtttagggtatttt 30236391  T
Q  164 gaggatgcgtgtcc 177  Q
    |||| || ||||||    
T  30236390 gagggtgtgtgtcc 30236377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 235 - 292
Target Start/End: Original strand, 35062453 - 35062510
Alignment:
Q  235 ctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 292  Q
    ||||||||||||| ||||||||||| ||||||  |||||||| |||||| ||||||||    
T  35062453 ctgatttggttctgaagtctggtgggccgatcgattttgattcgagatcgagagtcag 35062510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 216 - 292
Target Start/End: Complemental strand, 12898378 - 12898302
Alignment:
Q  216 gggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 292  Q
    ||||||||||||||||||  | |||||||  || |||||||||  |||||||||||||||| ||||||  |||||||    
T  12898378 gggggcgaggggtgccctattaatttggtaatatagtctggtgacccgatcacttttgattcgagatccggagtcag 12898302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 18690160 - 18690228
Alignment:
Q  109 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| ||||| || |||  |||||||||    
T  18690160 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgctttgagcgtgcgtgtcc 18690228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 17657100 - 17657021
Alignment:
Q  222 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||||||||| || | ||||  ||||||| ||||||  ||||||||||||||| ||||||  ||||||| ||||||||    
T  17657100 gaggggtgcccttctaagttggacctaaagtatggtgggtcgatcacttttgattcgagatcgggagtcagttctttggc 17657021  T

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Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 239 - 300
Target Start/End: Original strand, 15906686 - 15906747
Alignment:
Q  239 tttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    |||||| || ||||||||||| |||||||| ||||||| ||||||  ||||||| |||||||    
T  15906686 tttggtcctgaagtctggtgggccgatcacatttgattcgagatcgggagtcagttctttgg 15906747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 37 - 126
Target Start/End: Complemental strand, 34866464 - 34866375
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttg 126  Q
    |||| |||||||||  |||| ||||| |||||||||| ||| ||  || ||| |||||||||||| |||| ||||||||  |||||||||    
T  34866464 tttaagtgaggaggtgggtgcttgttagggtgatttcctttagaagcaacctctgttacacgggttcatgttcgtcgtcaatagctcttg 34866375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 1e-51; HSPs: 40)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 203 - 369
Target Start/End: Original strand, 7874255 - 7874419
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||  ||||||||||||||| ||||||  ||||||||||||||  |    
T  7874255 tctctagtgtaccgagggcgatgggtgccctgctgatttggttctaaagtctggtgggtcgatcacttttgattcgagatcgggagtcagctctttg--a 7874352  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
     | |||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  7874353 ctcaagttggtttttgggcttttgttttgtgctcattcggtggatcggaggtcgagaggttgtggaa 7874419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 203 - 375
Target Start/End: Original strand, 14405163 - 14405332
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||||||||||||||||||  || |||||||||||||||||||||||| |||||||||||||||| ||||||  ||||||||||||||||     
T  14405163 tctctggtgtaccgggggcgaggggtgct-tgatgatttggttctaaagtctggtgggccgatcacttttgattcgagatcgggagtcagctctttggc- 14405260  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgca 375  Q
     | |||||||||||| |||||||||||||||||||||||||||||| || || ||| |||||||||| |||||    
T  14405261 -tcaagttggtttttgggcttttgttttgtgctctttcggtggatcagaagtcgagtggttgtggaaactgca 14405332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 17105062 - 17105236
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt-c 130  Q
    |||| |||||||||||||||  |||||||||||||||||||| ||||||| |||||| || ||||| |||||||| |||||||| ||||||||| ||| |    
T  17105062 tgttgtttaggtgaggaggcgtgtgtttgttggggtgatttcctttggaggcagcctctgctacacaggtccatgttcgtcgtcactagctcttatttgc 17105161  T
Q  131 a-tttttgggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgat 203  Q
    | ||||| || |||||||||||||||||||||| |||| ||| ||| |||||| |||||||||||||||||||||    
T  17105162 acttttttggctgttaaggtgtttagggtgtttagagggtgcttgtcccgttgtgatgagccttttccttttgat 17105236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 207 - 363
Target Start/End: Complemental strand, 39338978 - 39338825
Alignment:
Q  207 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaatta 306  Q
    |||||||||||||||||||||||||||||| ||||||| ||| |||||||||| |||||| ||||||||| ||||||  ||||||| ||||||  | | |    
T  39338978 tggtgtaccgggggcgaggggtgccctgctaatttggtactatagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttg--actca 39338881  T
Q  307 agttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
    ||||||||||| ||| ||||| |||||||||||||||||||||||||| | ||||||    
T  39338880 agttggtttttgggc-tttgtgttgtgctctttcggtggatcggaggtcgcgaggtt 39338825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 218 - 369
Target Start/End: Complemental strand, 14106626 - 14106475
Alignment:
Q  218 gggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg--caattaagttggttt 315  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||  |||||  ||||||||||||| |  || ||   |||||||    
T  14106626 gggcgaggggtgccctgctgatttggtcctaaagtctggtgggccgatcacttttgattcaagatcgggagtcagctctttagatcagtt---ttggttt 14106530  T
Q  316 tttggcttttg-ttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
    || || ||||| |||||||||||||||||||||| ||||| ||||||||||||||    
T  14106529 ttgggtttttgtttttgtgctctttcggtggatcagaggtcgagaggttgtggaa 14106475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 243 - 378
Target Start/End: Original strand, 5254260 - 5254393
Alignment:
Q  243 gttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcgg 342  Q
    |||||||||||| |||| |||||||||||| ||||||||||  ||||| |||||||||   | |||||||||||  ||||||||||||||||| ||||||    
T  5254260 gttctaaagtctagtgggccgatcacttttaatttgagatcgggagtctgctctttggt--tcaagttggttttcgggcttttgttttgtgctttttcgg 5254357  T
Q  343 tggatcggaggttgagaggttgtggaacctgcatgt 378  Q
    |||||||||||| |||||||||||||| ||||||||    
T  5254358 tggatcggaggtcgagaggttgtggaagctgcatgt 5254393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 217 - 378
Target Start/End: Original strand, 387151 - 387311
Alignment:
Q  217 ggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggtttt 316  Q
    |||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||  ||||||  ||||||  | | |||||||||||    
T  387151 ggggcgaggggtgccctgctaatttggtactaaagtctggtgggctgatcacttttgatttgagatcgggagtcaattctttg--actcaagttggtttt 387248  T
Q  317 ttggcttttg-ttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 378  Q
    |  ||||||| ||||||||||||| ||||||||||||||   |||||| ||||| ||||||||    
T  387249 tgagcttttgtttttgtgctcttttggtggatcggaggtcacgaggttttggaagctgcatgt 387311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 375 - 507
Target Start/End: Complemental strand, 14106442 - 14106305
Alignment:
Q  375 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 468  Q
    |||||||||||||||||||||||||| ||     ||||||||||||| || ||||||| ||| ||||| ||||||||||| ||||||||||||||||| |    
T  14106442 atgtggctcagcttgggtgttgaagtctgagagttttattttgaggggtgttctttgggggtgagtagtgacgatgagtggttgtggatactgtgtttac 14106343  T
Q  469 agtgttttgtttctattaaggtgtccgtcttaggtggtg 507  Q
    | ||||| |||||| ||||||||||||||||||||||||    
T  14106342 aatgttt-gtttctgttaaggtgtccgtcttaggtggtg 14106305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 42 - 205
Target Start/End: Complemental strand, 41087208 - 41087040
Alignment:
Q  42 gtgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgt-ttcattttt--g 137  Q
    |||||||||| |||||||||||||| ||||||||||||||| |||||| |||||| ||||||| |  |||||||  ||||||||||| | | |||||  |    
T  41087208 gtgaggaggcgggtgtttgttgggggtgatttcttttggagtcagcctctgttactcgggtccttattcgtcgttactagctcttgtatgcgttttttgg 41087109  T
Q  138 ggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgatct 205  Q
    |||||||||||||| |||||||||||||||  ||| || |||||| | | ||||||||||| |||||||    
T  41087108 ggttgttaaggtgtctagggtgtttggaggtagcgggtcccgttgagctaagccttttcctattgatct 41087040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 375 - 507
Target Start/End: Original strand, 7460837 - 7460974
Alignment:
Q  375 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 468  Q
    |||||||||||||||||||||||||| ||     ||||||||||||| || ||||||| | | ||||| ||||||| ||| ||||||||| ||||||| |    
T  7460837 atgtggctcagcttgggtgttgaagtctgggagttttattttgaggggtgttctttggggttgagtagtgacgatgtgtggttgtggatattgtgtttac 7460936  T
Q  469 agtgttttgtttctattaaggtgtccgtcttaggtggtg 507  Q
    ||||||| |||||| ||||||||||||||||||| ||||    
T  7460937 agtgttt-gtttctgttaaggtgtccgtcttaggcggtg 7460974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 375 - 511
Target Start/End: Original strand, 5254417 - 5254553
Alignment:
Q  375 atgtggctcagcttgggtgttgaagtatgtt--tattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttcagt 471  Q
    ||||||||||| |||||||||||||| ||    | ||||||||| || |||||||  || ||||| ||||||| ||| ||||||||||||||||| ||||    
T  5254417 atgtggctcagtttgggtgttgaagtctgagagttttttgaggggtgttctttgg--gtgagtagtgacgatgggtggttgtggatactgtgtttacagt 5254514  T
Q  472 gttttgtttctattaaggtgtccgtcttaggtggtgatgt 511  Q
    |||| |||||| ||||||||||||||||||||||||||||    
T  5254515 gttt-gtttctgttaaggtgtccgtcttaggtggtgatgt 5254553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 375 - 504
Target Start/End: Original strand, 7874452 - 7874585
Alignment:
Q  375 atgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtg-ttgtggatactgtgttttc 468  Q
    |||||||||||||||||||||||||| |      ||||||||||||| || ||||||| ||| ||||| ||||||| ||| ||||||||||||||||| |    
T  7874452 atgtggctcagcttgggtgttgaagtcttggagttttattttgagggatgttctttgg-ggtgagtagtgacgatgggtggttgtggatactgtgtttac 7874550  T
Q  469 agtgttttgtttctattaaggtgtccgtcttaggtg 504  Q
    |||| ||||||||| | |||||||||||||||||||    
T  7874551 agtg-tttgtttctgtcaaggtgtccgtcttaggtg 7874585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 22 - 168
Target Start/End: Complemental strand, 37771085 - 37770933
Alignment:
Q  22 gggtggtagatgttatttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctag 120  Q
    ||||||| | |||| ||||||||||||||| ||||||||||| ||||||||||| |||||| | |||| | | || ||||||| || |||||||| ||||    
T  37771085 gggtggttggtgttgtttaggtgaggaggcgggtgtttgttgagggtgatttctgttggaggctgcctctataactcgggtccttgttcgtcgtcactag 37770986  T
Q  121 ctcttgttt-cattttt---gggttgttaaggtg-tttagggtgtttggagga 168  Q
    || |||||| | |||||   |||||||||||||| ||||||||||||||||||    
T  37770985 cttttgtttgcgtttttttggggttgttaaggtgttttagggtgtttggagga 37770933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 167
Target Start/End: Original strand, 1269128 - 1269270
Alignment:
Q  30 gatgttat-ttaggtgaggaggcaggtgtttgtt-ggggtgatttcttttggagacagcctttgttacacgggtccatg-gtcgtcgtcgctagctcttg 126  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||||| |||||   |||| | |||| ||||||| ||  |||||||| ||||||||||    
T  1269128 gatgttatgttaggtgaggaggcgggtgtttgttgggggtgatttcttctggaggttgcctctattactcgggtccttgtttcgtcgtcactagctcttg 1269227  T
Q  127 ttt-cattttt-gggttgttaaggtgtttagggtgtttggagg 167  Q
    ||| | ||||| |||||||||| ||||||| ||||||||||||    
T  1269228 tttgcgtttttggggttgttaaagtgtttatggtgtttggagg 1269270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 10524061 - 10524141
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    |||||||| ||| ||||||||| ||||||||||  ||||||| ||| |||||||||| |||||||||||||||| ||||||    
T  10524061 tctctggtctactgggggcgagaggtgccctgccaatttggtgctatagtctggtgggccgatcacttttgattcgagatc 10524141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 222 - 301
Target Start/End: Original strand, 1269466 - 1269545
Alignment:
Q  222 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||||||||| ||||||| || |||||||||||||| |||||||||||||||| ||||||   |||||| ||||||||    
T  1269466 gaggggtgcccttctgatttagtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggc 1269545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 38 - 203
Target Start/End: Complemental strand, 39339290 - 39339121
Alignment:
Q  38 ttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 134  Q
    ||||||||||| | ||||| |||||| |||||||||  ||| ||  || ||  ||||||||||||||||| |||||||  ||||||||||||  |  |||    
T  39339290 ttaggtgaggatgtaggtggttgttgtgggtgattttctttagaagcaacccctgttacacgggtccatgttcgtcgttactagctcttgtttgtgcttt 39339191  T
Q  135 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 203  Q
    |||||| ||| ||||||||| |  ||||||||| || ||||| ||||| | |||||||||||||||||||    
T  39339190 ttgggtggtttaggtgtttacgaagtttggagggtgtgtgtcacgttgtgttgagccttttccttttgat 39339121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 37770758 - 37770685
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 276  Q
    |||||||||||||| ||| |||||||||||  |||||||||| |||| || |||||| ||||||||||||||||    
T  37770758 tctctggtgtaccgagggtgaggggtgcccatctgatttggtcctaaggtttggtgggccgatcacttttgatt 37770685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 369
Target Start/End: Complemental strand, 10173695 - 10173532
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||| | || || |||||| ||  || |||||| ||||||||| |||| |||||||||||||||| ||||||   ||| || | ||||||     
T  10173695 tctctggtgtaccagaggtgaagggtgctcttttgttttggtcctaaagtctagtgggccgatcacttttgattcgagatcggaagtaagttatttggc- 10173597  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
     | ||||| | |||| |||||||| || ||| |||||||||| ||||||||| ||||||| ||||||    
T  10173596 -tcaagtttggttttgggcttttg-ttggtgttctttcggtgaatcggaggtcgagaggtggtggaa 10173532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 207 - 297
Target Start/End: Original strand, 17105379 - 17105470
Alignment:
Q  207 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcac-ttttgatttgagatcaagagtcagctctt 297  Q
    ||||||||| |||| |||||||||||| |||||||||| || ||||||| ||| |||||||| |||||||| |||||| ||| |||| ||||    
T  17105379 tggtgtaccaggggtgaggggtgccctactgatttggtactgaagtctgatgggccgatcactttttgattcgagatcgagaatcagatctt 17105470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 7695719 - 7695893
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttggggt-gatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttc 130  Q
    |||| ||||||||| |||||  ||||||||||| || ||||| |||| ||| | |||| |||||| ||||||| || |||  ||| ||||||||| || |    
T  7695719 tgttgtttaggtgaagaggcgagtgtttgttggagttgatttattttagaggctgcctctgttactcgggtccttgttcgctgtccctagctctttttgc 7695818  T
Q  131 atttt-tgggttgttaaggtgtttagggtgtttggaggatgcg-tgtccgttgcgatgagccttttccttttgat 203  Q
     |||| ||||||||||||||||||||| ||||| || || |||   ||| ||| | |||||||||||||||||||    
T  7695819 gttttttgggttgttaaggtgtttaggctgtttagaagaagcgaattcctttgtgttgagccttttccttttgat 7695893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 108 - 177
Target Start/End: Complemental strand, 22885481 - 22885412
Alignment:
Q  108 tcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    |||||||||||| ||||||||| | ||| |||||| ||||||||||| |||| ||||||| |||||||||    
T  22885481 tcgtcgtcgctacctcttgtttgagtttcgggttgctaaggtgtttaaggtgattggagggtgcgtgtcc 22885412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 246 - 301
Target Start/End: Original strand, 16959989 - 16960044
Alignment:
Q  246 ctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||||||||||| |||||| ||||||||| |||||| |||||||| ||||||||    
T  16959989 ctaaagtctggtgggccgatcgcttttgattcgagatcgagagtcagttctttggc 16960044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 223 - 369
Target Start/End: Complemental strand, 22885229 - 22885088
Alignment:
Q  223 aggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggct 322  Q
    |||||||||| |||| |||| | || ||||||||||| |||||||||||||||| ||||||  ||||||| |||||||   | ||||| | |||| ||      
T  22885229 aggggtgccc-gctggtttgatcctgaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgg--ttcaagtttggttttggg-- 22885135  T
Q  323 tttgtttt-gtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
     ||||||| ||| |||||||||||| | ||||||||||||| ||||||    
T  22885134 -ttgttttggtgttctttcggtggaccagaggttgagaggtggtggaa 22885088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 9560886 - 9560825
Alignment:
Q  222 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    |||||||||| || |||||||  || ||||| ||||||||||||||||||||||| ||||||    
T  9560886 gaggggtgccttgatgatttgtgtcgaaagtttggtggaccgatcacttttgattcgagatc 9560825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 203 - 284
Target Start/End: Complemental strand, 41086904 - 41086824
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatca 284  Q
    ||||||||||||| |||| ||||| |||||| ||||||||||  || ||||||||||  | ||||||||||||| |||||||    
T  41086904 tctctggtgtaccaggggtgaggg-tgcccttctgatttggtcatatagtctggtgggtcaatcacttttgattcgagatca 41086824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 251 - 369
Target Start/End: Original strand, 2062901 - 2063015
Alignment:
Q  251 gtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcgg 350  Q
    ||||||||| |||||  ||||||||| ||||||  ||||||||||||||||  | ||||| | |||| ||||||  ||| ||| |||||||||| | | |    
T  2062901 gtctggtgggccgattgcttttgattcgagatcgggagtcagctctttggc--tcaagtttggttttgggcttt--tttggtgttctttcggtgtaccag 2062996  T
Q  351 aggttgagaggttgtggaa 369  Q
    |||||| ||||||||||||    
T  2062997 aggttgtgaggttgtggaa 2063015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 15710437 - 15710505
Alignment:
Q  109 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| |||||  | ||| ||||||||||    
T  15710437 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgccttgagcatgcgtgtcc 15710505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 15722900 - 15722968
Alignment:
Q  109 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| ||||| || |||  |||||||||    
T  15722900 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgctttgagcgtgcgtgtcc 15722968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 247 - 369
Target Start/End: Original strand, 34230209 - 34230327
Alignment:
Q  247 taaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtgga 346  Q
    |||||| || ||| ||||||| |||| ||| ||||||| ||||||| |||||||  || ||||| | |||| |||||||  | ||   ||||||||||||    
T  34230209 taaagtttgatgggccgatcattttttattcgagatcaggagtcagttctttgg--atcaagtttgattttgggctttt--tgtggtttctttcggtgga 34230304  T
Q  347 tcggaggttgagaggttgtggaa 369  Q
    |||||||||||||||| ||||||    
T  34230305 tcggaggttgagaggtggtggaa 34230327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 284
Target Start/End: Original strand, 8520385 - 8520447
Alignment:
Q  222 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatca 284  Q
    |||||||||| |  ||||||| ||||| |||||| |||||| ||||||||||||| |||||||    
T  8520385 gaggggtgccttagtgatttgtttctagagtctgatggaccaatcacttttgattcgagatca 8520447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 16952371 - 16952337
Alignment:
Q  335 tctttcggtggatcggaggttgagaggttgtggaa 369  Q
    |||||||||||||||||||||||||||| ||||||    
T  16952371 tctttcggtggatcggaggttgagaggtggtggaa 16952337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 17023036 - 17023002
Alignment:
Q  335 tctttcggtggatcggaggttgagaggttgtggaa 369  Q
    |||||||||||||||||||||||||||| ||||||    
T  17023036 tctttcggtggatcggaggttgagaggtggtggaa 17023002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 335 - 369
Target Start/End: Complemental strand, 17060342 - 17060308
Alignment:
Q  335 tctttcggtggatcggaggttgagaggttgtggaa 369  Q
    |||||||||||||||||||||||||||| ||||||    
T  17060342 tctttcggtggatcggaggttgagaggtggtggaa 17060308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 159
Target Start/End: Complemental strand, 25505258 - 25505196
Alignment:
Q  97 cgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtg 159  Q
    |||||||||  |||| | ||||| ||||||||| | ||||| |||||||||||||||||||||    
T  25505258 cgggtccattttcgttgacgctacctcttgtttgagttttgagttgttaaggtgtttagggtg 25505196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 203 - 292
Target Start/End: Original strand, 27739939 - 27740028
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 292  Q
    ||||||||| || |||||  ||||||||||  |||  ||||| || ||||||||||| |||||| |||||||||  ||||| ||||||||    
T  27739939 tctctggtggactgggggttaggggtgcccatctggattggtcctgaagtctggtgggccgatcgcttttgattcaagatcgagagtcag 27740028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 10523819 - 10523922
Alignment:
Q  103 catggtcgtcgtcgctagctcttgtt--tcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttt 199  Q
    |||| |||||||| ||||||||||||  |  |||| |||| ||| ||||||||| || ||||| ||| |||||||| ||||| | ||||||||||| |||    
T  10523819 catgttcgtcgtcactagctcttgtttgtgcttttcgggtggtttaggtgtttacggagtttgtagggtgcgtgtcacgttgtgttgagccttttctttt 10523918  T
Q  200 tgat 203  Q
    ||||    
T  10523919 tgat 10523922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 16952725 - 16952681
Alignment:
Q  108 tcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgt 151  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  16952725 tcgtcgtcactagctcttatttgcatttttgggttgttaaggtgt 16952681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 17023390 - 17023346
Alignment:
Q  108 tcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgt 151  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  17023390 tcgtcgtcactagctcttatttgcatttttgggttgttaaggtgt 17023346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 151
Target Start/End: Complemental strand, 17060696 - 17060652
Alignment:
Q  108 tcgtcgtcgctagctcttgttt-catttttgggttgttaaggtgt 151  Q
    |||||||| ||||||||| ||| ||||||||||||||||||||||    
T  17060696 tcgtcgtcactagctcttatttgcatttttgggttgttaaggtgt 17060652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 3e-46; HSPs: 29)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 210 - 378
Target Start/End: Complemental strand, 31050772 - 31050605
Alignment:
Q  210 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagt 309  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||||   ||| || |||||||   || |||    
T  31050772 tgtaccgggggcgaggggtgccctactgatttggttctaaagtctggtgggccgatcacttttgattcgagatcggaagttaggtctttgg--tttgagt 31050675  T
Q  310 tggttttttggcttttg-ttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 378  Q
    |||||||| |||||||| |||||||||||||| ||||||||||||| |||||||||||||| ||||||||    
T  31050674 tggtttttgggcttttgtttttgtgctctttcagtggatcggaggtcgagaggttgtggaagctgcatgt 31050605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 8254991 - 8255148
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||  |||||||  |||||| ||||||  |    
T  8254991 tctctggtgtaccgggggcgaggggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttg--a 8255088  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | |||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||    
T  8255089 ctcaagttggtttttgggc-tttgttttgtgctctttcggtggatcggaggtcgcgaggtt 8255148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 8268409 - 8268566
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||  |||||||  |||||| ||||||  |    
T  8268409 tctctggtgtaccgggggcgaggggtgccctgctaatttggtactaaagtctggtgggccgatcacttttgatccgagatcagaagtcagttctttg--a 8268506  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | |||||||||||| ||| |||||||||||||||||||||||||||||||| | ||||||    
T  8268507 ctcaagttggtttttgggc-tttgttttgtgctctttcggtggatcggaggtcgcgaggtt 8268566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 203 - 378
Target Start/End: Original strand, 2825747 - 2825920
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||||| ||||| ||||||| |||||||| ||||||  || ||| |||||||||     
T  2825747 tctctggtgtaccgagggcgaggggtgctctgctgatttggttctaaagtccggtgggccgatcatttttgattcgagatcgggaatcacctctttggc- 2825845  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 378  Q
     | ||  |||||||| ||||||| |||||| |||||||||||||||||||||  ||||||||||||| ||||||||    
T  2825846 -tcaatgtggtttttgggcttttattttgtactctttcggtggatcggaggtctagaggttgtggaagctgcatgt 2825920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 32 - 203
Target Start/End: Original strand, 19672753 - 19672927
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt-tc 130  Q
    |||| ||||||||||||||| |||||||||| |||||||||| ||||||| || |||  ||||||||| |||||| |||||| | ||||||||||||       
T  19672753 tgttgtttaggtgaggaggcgggtgtttgtttgggtgatttcctttggaggcatcctccgttacacggatccatgttcgtcgccactagctcttgttggt 19672852  T
Q  131 atttttgggttgttaaggtgtttaggg-tgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 203  Q
     ||||||||||||||||||||||||||   ||||| || |||||||| ||||| |||||||||||||||||||||    
T  19672853 gtttttgggttgttaaggtgtttagggaattttggggggtgcgtgtctcgttgagatgagccttttccttttgat 19672927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 37 - 203
Target Start/End: Original strand, 8254683 - 8254852
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 134  Q
    |||| |||||||||| |||| ||||||||| |||||  ||||||  || ||||||||||||||||||||| |||||||| ||||||||||||  | |||     
T  8254683 tttaagtgaggaggcgggtgcttgttggggagattttctttggaagcaacctttgttacacgggtccatgttcgtcgtcactagctcttgtttgtgattg 8254782  T
Q  135 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 203  Q
    |||||| ||| |||||||||  | ||||| ||| |||||||| | ||| | |||||||||||||||||||    
T  8254783 ttgggtggtttaggtgtttaccgagtttgaagggtgcgtgtcgctttgtgttgagccttttccttttgat 8254852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 37 - 203
Target Start/End: Original strand, 8268101 - 8268270
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 134  Q
    |||| |||||||||| |||| ||||||||| |||||  ||||||  || ||||||||||||||||||||| |||||||| ||||||||||||  | |||     
T  8268101 tttaagtgaggaggcgggtgcttgttggggagattttctttggaagcaacctttgttacacgggtccatgttcgtcgtcactagctcttgtttgtgattg 8268200  T
Q  135 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 203  Q
    |||||| ||| |||||||||  | ||||| ||| |||||||| | ||| | |||||||||||||||||||    
T  8268201 ttgggtggtttaggtgtttaccgagtttgaagggtgcgtgtcgctttgtgttgagccttttccttttgat 8268270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 53823538 - 53823440
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    ||||||||||||||| || |||||||||||| ||||||||||  |||||||||||||||| ||||||||||||| ||||||  ||||||| ||||||||    
T  53823538 tctctggtgtaccggaggtgaggggtgcccttctgatttggtcataaagtctggtggaccaatcacttttgattcgagatcgggagtcagttctttggc 53823440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 30964405 - 30964562
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||| ||||||||||||||||||| ||||||| ||| | |||| ||| |||||||||||||||| | ||||  ||||| | ||||||  |    
T  30964405 tctctggtgtaccgagggcgaggggtgccctgctaatttggtactataatctgatgggccgatcacttttgattcgtgatcgggagtccgttctttg--a 30964502  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | ||||||| ||||||| |||||| ||||||||||| ||||| |||||||| | ||||||    
T  30964503 ctcaagttgg-tttttgggttttgtgttgtgctcttttggtggttcggaggtcgcgaggtt 30964562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 287 - 378
Target Start/End: Complemental strand, 35341371 - 35341282
Alignment:
Q  287 agtcagctctttggcaattaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatgt 378  Q
    |||||||||||||||  | |||||||||||| | |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||    
T  35341371 agtcagctctttggc--tcaagttggtttttggccttttgttttgtgctctttcggtggatcggagttcgagaggttgtggaagctgcatgt 35341282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 203 - 345
Target Start/End: Original strand, 4305689 - 4305828
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||||||||| || ||||||||||| ||||||| ||| ||||||||||  ||||||||||||||| ||||||  |||| || |||||| |     
T  4305689 tctctggtgtaccgggggcaagcggtgccctgctaatttggtactatagtctggtggggcgatcacttttgattcgagatcgggagttagttctttgtc- 4305787  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtgg 345  Q
     | |||||||||||| ||| ||||| ||||||||||| |||||    
T  4305788 -tcaagttggtttttaggc-tttgtgttgtgctcttttggtgg 4305828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 53 - 203
Target Start/End: Complemental strand, 31051070 - 31050917
Alignment:
Q  53 ggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggttg-ttaaggt 149  Q
    |||||||||| ||||| |||| ||||||| |||||| || |||||||||||| | |||||||| ||||||||||||  || ||||||||||| |||||||    
T  31051070 ggtgtttgtttgggtgttttcctttggaggcagcctctggtacacgggtccacgttcgtcgtcactagctcttgttggtc-tttttgggttgtttaaggt 31050972  T
Q  150 gtttagggtg-tttggaggatgcgtgtccgttgcgatgagccttttccttttgat 203  Q
    |||||||| | |||||||| |||||  |||||| |||||| || |||||||||||    
T  31050971 gtttagggagttttggagggtgcgttcccgttgtgatgagtctcttccttttgat 31050917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 213 - 301
Target Start/End: Complemental strand, 19815331 - 19815243
Alignment:
Q  213 accgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||||| |||||||||||| ||| |||||| |||||||||||||||||||| |||||| ||| ||||||| ||||||| ||||||||    
T  19815331 accgggggtgaggggtgcccttctgttttggtcctaaagtctggtggaccgattactttttattcgagatcaggagtcagttctttggc 19815243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 25753136 - 25753283
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||||| || |||| ||||||  || ||||||| ||||||||||||||  ||||||||||||||| ||||||  ||||||| ||||||||     
T  25753136 tctctggtgtaccggaggtgaggagtgcccgtcttatttggtcctaaagtctggtggggcgatcacttttgattcgagatcgggagtcagttctttggc- 25753234  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 354  Q
     | ||||| | |||| ||||||| | ||||  ||||||||||||||||||||    
T  25753235 -tcaagtttgattttgggctttt-tattgt-ttctttcggtggatcggaggt 25753283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 38929791 - 38929889
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    ||||||||| ||||||||  ||||||||||  ||| || ||| || ||||||| ||| |||||||||||||||| ||||||||||||||| ||||||||    
T  38929791 tctctggtggaccgggggtaaggggtgcccgtctggttgggtcctgaagtctgctgggccgatcacttttgattcgagatcaagagtcagttctttggc 38929889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 236 - 298
Target Start/End: Original strand, 49747524 - 49747586
Alignment:
Q  236 tgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctcttt 298  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||| |||||||| |||||    
T  49747524 tgatttggttctaaagtctggtgagccgatcacttttgatttgagatcgagagtcagttcttt 49747586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 203
Target Start/End: Original strand, 30964104 - 30964266
Alignment:
Q  44 gaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcatttttgggtt 141  Q
    |||||||  |||| ||||||||||||| || |||  |  || ||| ||||||||||||||||| |||||||| |||||| |||||  |  |||||||||     
T  30964104 gaggaggtgggtgcttgttggggtgatatcctttaaaagcaacctctgttacacgggtccatgttcgtcgtcactagctattgtttgtgctttttgggtg 30964203  T
Q  142 gttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 203  Q
    ||| ||||||||  || ||||||||| |||||||| ||||| | ||| |||||||||||||||    
T  30964204 gtttaggtgtttgcggagtttggagggtgcgtgtcacgttgtgttgaaccttttccttttgat 30964266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 300
Target Start/End: Complemental strand, 2061855 - 2061758
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    ||||||||||| ||  || ||||||||||||  ||||||| | |||||||||||||| | |||||||||||||| |||||  |||||||| |||||||    
T  2061855 tctctggtgtatcgaaggtgaggggtgccctcttgatttgatcctaaagtctggtgggctgatcacttttgattcgagattgagagtcagttctttgg 2061758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 37 - 199
Target Start/End: Original strand, 4305381 - 4305546
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 134  Q
    |||| |||||||||  |||| |||||||||||||||| ||| ||  ||   | ||||||| || |||||| |||||||| ||||||||||||  |  |||    
T  4305381 tttaagtgaggaggtgggtgcttgttggggtgatttcctttagaagcaatatctgttacatggatccatgttcgtcgtcactagctcttgtttgtgcttt 4305480  T
Q  135 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttt 199  Q
    ||||||||||  |||||||  |||||||||| | | |||||| ||||| | |||||||||||||||    
T  4305481 ttgggttgtttgggtgttttcggtgtttggaaggttcgtgtcacgttgtgttgagccttttccttt 4305546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 215 - 301
Target Start/End: Original strand, 19673077 - 19673162
Alignment:
Q  215 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||| |||||||||||| ||| |||||| |||||||||||||||||  || ||||| ||| ||||||| ||||||| ||||||||    
T  19673077 cgggggtgaggggtgcccttctgttttggtcctaaagtctggtggaccattccctttt-attcgagatcaggagtcagttctttggc 19673162  T

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Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 22811276 - 22811179
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    ||||||||||| |||||  |||| ||||||| ||||||||||  ||||||||||||| ||||||| |||| ||| ||||||  ||||||| ||||||||    
T  22811276 tctctggtgtatcggggt-gaggagtgcccttctgatttggtcttaaagtctggtgggccgatcattttttattcgagatcgggagtcagttctttggc 22811179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 226 - 283
Target Start/End: Original strand, 35800476 - 35800533
Alignment:
Q  226 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    |||||||| ||||||||||||| |||||||||| ||||||| ||||||||| ||||||    
T  35800476 ggtgcccttctgatttggttctgaagtctggtgaaccgatcgcttttgattcgagatc 35800533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 21387321 - 21387241
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    ||||||||| | |||||| ||||  | |||| |||||||||| ||  ||||||||||||||||||||||||||| ||||||    
T  21387321 tctctggtggatcgggggtgaggaatacccttctgatttggtgctggagtctggtggaccgatcacttttgattcgagatc 21387241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 376 - 511
Target Start/End: Complemental strand, 31050580 - 31050440
Alignment:
Q  376 tgtggctcagcttgggtgttgaagtatg-----tttattttgagggttgctctttggaggtaagtagcgacgatgagtgttg-tggatactgtgttttca 469  Q
    ||||||| ||||||||||||||||| ||     ||||||||||||| || || |||| ||| ||||| |||||||  || || |||||  ||||||| ||    
T  31050580 tgtggctaagcttgggtgttgaagtctggctgttttattttgaggggtgttccttgggggtgagtagtgacgatggatgatggtggatgttgtgtttaca 31050481  T
Q  470 gtgttttgtttctattaaggtgtccgtcttaggtggtgatgt 511  Q
    |||||| | |||| || |||||| ||||||||||||||||||    
T  31050480 gtgttt-gcttctgttgaggtgttcgtcttaggtggtgatgt 31050440  T

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Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 118 - 203
Target Start/End: Complemental strand, 22811504 - 22811416
Alignment:
Q  118 tagctcttgttt-catttttg-ggttgttaaggtgtttagggtgtttggaggatgcgtgt-ccgttgcgatgagccttttccttttgat 203  Q
    |||||||||||| | |||||| |||||||||||||||||||| |||||||||| ||| || ||||||   | |||||||||||||||||    
T  22811504 tagctcttgtttgcttttttgtggttgttaaggtgtttagggagtttggaggaagcgggtcccgttgatctaagccttttccttttgat 22811416  T

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Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 281
Target Start/End: Complemental strand, 19311451 - 19311381
Alignment:
Q  210 tgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgaga 281  Q
    |||| |||||| |||||||| ||| ||||||||||| ||| |||||||||  ||||||||||||||| ||||    
T  19311451 tgtaacgggggtgaggggtgtccttctgatttggttttaa-gtctggtgggtcgatcacttttgattcgaga 19311381  T

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Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 36962713 - 36962643
Alignment:
Q  222 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 292  Q
    ||||||| || | ||||||||||| |  |||||||||| ||||| |||||||||| ||||||| |||||||    
T  36962713 gaggggtaccttactgatttggttttggagtctggtgggccgattacttttgattcgagatcaggagtcag 36962643  T

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Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 250 - 292
Target Start/End: Complemental strand, 39041344 - 39041302
Alignment:
Q  250 agtctggtggaccgatcacttttgatttgagatcaagagtcag 292  Q
    |||||||||| |||||||||||||||| ||||||| |||||||    
T  39041344 agtctggtgggccgatcacttttgattcgagatcaggagtcag 39041302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 283
Target Start/End: Complemental strand, 39421111 - 39421050
Alignment:
Q  222 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    |||||||||||| ||||| ||||  || || ||||||| |||||||||||||||| ||||||    
T  39421111 gaggggtgcccttctgatatggtcttatagcctggtgggccgatcacttttgattcgagatc 39421050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 3e-43; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 29087445 - 29087603
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||| ||||||||||||||||||||| |||||  ||||||||||||||||||||||| |||| ||||||||| ||||||| ||||||| ||||||  |    
T  29087445 tctctgttgtaccgggggcgaggggtgctctgctattttggttctaaagtctggtggactgatcccttttgattcgagatcaggagtcagttctttg--a 29087542  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
    || || ||||||| | |||||||||||||||||||||||||||||||||||| | ||||||    
T  29087543 atcaaattggtttctgggcttttgttttgtgctctttcggtggatcggaggtcgcgaggtt 29087603  T

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Target: chr5; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 34378062 - 34378219
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||||||||||| ||| |||||||||| ||||||| |||||||||||||| |||||||||||||||| ||||||  ||||||| |||||| ||    
T  34378062 tctctggtgtaccgggggcaaggagtgccctgctaatttggtactaaagtctggtgggccgatcacttttgattcgagatcgggagtcagttctttgaca 34378161  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
       |||||||||||| ||| |||||||||||||||||||||||| ||||||| | ||||||    
T  34378162 --caagttggtttttgggc-tttgttttgtgctctttcggtggaccggaggtcgcgaggtt 34378219  T

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Target: chr5; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 698325 - 698482
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||| ||||||  |||||| |||||||  |    
T  698325 tctctggtgtaccgggggcgaggggtgccctgctaatttggtgctatagtctggtggaccgatctcttttgattcgagatcgggagtcaactctttg--a 698422  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | |||||||||||| ||| ||||| |||| ||||||| |||| || ||||||| ||||||    
T  698423 ctcaagttggtttttgggc-tttgtgttgtactctttctgtggttcagaggttgcgaggtt 698482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 203 - 302
Target Start/End: Complemental strand, 7392148 - 7392049
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||| ||||||| ||| |||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||||  ||||||| |||||||||    
T  7392148 tctctgatgtaccgagggtgaggggtgcccttctgatttggtcctaaagtctggtggaccgatcacttttgattcgagatcgggagtcagttctttggca 7392049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 37 - 177
Target Start/End: Original strand, 29087204 - 29087346
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt--tcattt 134  Q
    |||||| ||||||||||||||| |||||||||||||  | ||||  || ||| ||||||| ||||||||| |||||||| ||||||||||||  |  |||    
T  29087204 tttaggcgaggaggcaggtgttggttggggtgattttctatggaagcaacctctgttacatgggtccatgttcgtcgtcactagctcttgtttgtgtttt 29087303  T
Q  135 ttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    |||||| ||| ||||||||| || |||||||||||||||||||    
T  29087304 ttgggtggtttaggtgtttacggagtttggaggatgcgtgtcc 29087346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 32 - 168
Target Start/End: Complemental strand, 26046395 - 26046256
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttggggt-gatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 129  Q
    |||| |||||||||| |||| ||||||||||||||| |||||||||||||||| |||| |||||| ||||||| || ||||| || |||||||||||||     
T  26046395 tgttgtttaggtgagtaggcgggtgtttgttggggttgatttcttttggagactgcctctgttactcgggtccttgttcgtcttcactagctcttgtttg 26046296  T
Q  130 catttttgggttg-ttaaggtgtttagggtgtttggagga 168  Q
      |||||||| || || ||||||||||||||||| |||||    
T  26046295 tgtttttggggtgttttaggtgtttagggtgtttagagga 26046256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 32 - 177
Target Start/End: Complemental strand, 7195672 - 7195523
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttgg-ggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 129  Q
    |||| |||| |||||||||||||||||| |||  |||||||||||||  |||| || | |||||| ||||||| || | || ||| |||||||||||||     
T  7195672 tgttgtttacgtgaggaggcaggtgtttattgtaggtgatttcttttatagactgcttatgttactcgggtccttgtttgttgtcactagctcttgttta 7195573  T
Q  130 catt--tttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    ||||  |||||||| |||||||||||||||||||||||||| ||||||||    
T  7195572 cattgttttgggttattaaggtgtttagggtgtttggaggaagcgtgtcc 7195523  T

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Target: chr5; HSP #8
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 64 - 177
Target Start/End: Complemental strand, 24072659 - 24072546
Alignment:
Q  64 gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttg 163  Q
    |||||||||||||| ||| | |||| |||||  |||||||||  |||| ||||||||||||||||| | ||||||||||||||||||||||||||| ||     
T  24072659 gggtgatttcttttagaggccgcctctgttattcgggtccatattcgttgtcgctagctcttgtttaagttttgggttgttaaggtgtttagggtgcttt 24072560  T
Q  164 gaggatgcgtgtcc 177  Q
     ||| |||||||||    
T  24072559 aagggtgcgtgtcc 24072546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 354
Target Start/End: Original strand, 18593207 - 18593355
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||| |||||||||||||||||| ||||||||| ||||||| ||| ||| | |||| | |||||||||||||| ||||||  |||| || ||||||  |    
T  18593207 tctctcgtgtaccgggggcgagggatgccctgctaatttggtgctatagtttagtgggcagatcacttttgattcgagatcgggagttagttctttg--a 18593304  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 354  Q
     | |||||||||||| ||| || || ||||||||||||||||| ||||||||    
T  18593305 ctcaagttggtttttgggc-ttagtgttgtgctctttcggtggttcggaggt 18593355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 203 - 300
Target Start/End: Complemental strand, 33258999 - 33258902
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    ||||||||||||||  || |||||||| ||| ||| |||||| |||||||||||||| |||||||||||||||| ||||||| |||| || |||||||    
T  33258999 tctctggtgtaccgaaggtgaggggtgtccttctgttttggtgctaaagtctggtgggccgatcacttttgattcgagatcaggagttagttctttgg 33258902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 203 - 377
Target Start/End: Complemental strand, 14302547 - 14302377
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    ||||||||||| || ||| ||||| |||||| ||| |||||| |||||||||||||||| ||||||||||| || |||||   ||||||| |||||||      
T  14302547 tctctggtgtatcgagggtgagggatgcccttctgttttggtcctaaagtctggtggactgatcacttttggttcgagattgggagtcagttctttgg-- 14302450  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaacctgcatg 377  Q
    |  ||||| | |||| ||||||  || ||   |||||||||||||||||||| ||||||| |||||| |||||||    
T  14302449 agcaagtttggttttgggcttt--ttatggtttctttcggtggatcggaggtcgagaggtggtggaagctgcatg 14302377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 203 - 283
Target Start/End: Complemental strand, 13954350 - 13954271
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    ||||||||||||||  || |||||||||| | |||||||||| |||||||||||||| |||||||||||||||| ||||||    
T  13954350 tctctggtgtaccgaaggtgaggggtgcctt-ctgatttggtcctaaagtctggtgggccgatcacttttgattcgagatc 13954271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 203 - 301
Target Start/End: Complemental strand, 7195355 - 7195258
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    ||||||||||||| |||  |||||||||||| |||||||||   ||||||||||||  |||||||||||||||| ||||||  ||||||| ||||||||    
T  7195355 tctctggtgtaccagggt-gaggggtgcccttctgatttggccataaagtctggtgagccgatcacttttgattcgagatcgggagtcagttctttggc 7195258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 167
Target Start/End: Complemental strand, 13954663 - 13954525
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt- 129  Q
    |||| ||||||||||||| | |||||||||||||| ||||||| | |||||   || |||||||  | ||||  || |||||||| |||||||||||||     
T  13954663 tgttgtttaggtgaggagacgggtgtttgttgggggtgatttcctctggaggttgcgtttgttattcaggtctttgttcgtcgtcactagctcttgtttg 13954564  T
Q  130 catttttgg-gttgttaaggtgtttagggtgtttggagg 167  Q
    | ||| ||| |||||||||||||||||||||||||||||    
T  13954563 cgtttctggagttgttaaggtgtttagggtgtttggagg 13954525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 306 - 369
Target Start/End: Complemental strand, 7162333 - 7162270
Alignment:
Q  306 aagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
    |||||||||||| || |||||||||||||||||||| |||||||||||| | |||||| |||||    
T  7162333 aagttggtttttgggtttttgttttgtgctctttcgatggatcggaggtcgcgaggttatggaa 7162270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 203 - 301
Target Start/End: Original strand, 8297432 - 8297530
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    ||||| |||||||| ||| |||||||||||| |||||||||||||||||  |||||| |  || | |||||||| ||||||  ||||||| ||||||||    
T  8297432 tctctagtgtaccgagggtgaggggtgcccttctgatttggttctaaagcatggtgggctaataatttttgattcgagatcgggagtcagttctttggc 8297530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 300
Target Start/End: Complemental strand, 24072383 - 24072286
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    ||||||||| |||| |||   |||||||||| |||||||||| |||||||||||| | | |||| ||||||||||||||||   |||||| |||||||    
T  24072383 tctctggtggaccgagggtttggggtgcccttctgatttggtcctaaagtctggttggctgatcgcttttgatttgagatcggaagtcagttctttgg 24072286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 203 - 292
Target Start/End: Original strand, 31721641 - 31721730
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 292  Q
    ||||||||| ||||||||  ||||||||||| ||||| ||||||| ||||||  ||| |||||| ||||||||| ||||||  |||||||    
T  31721641 tctctggtggaccgggggtaaggggtgcccttctgatgtggttctgaagtctaatgggccgatcgcttttgattcgagatcgggagtcag 31721730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 242 - 301
Target Start/End: Complemental strand, 22675402 - 22675343
Alignment:
Q  242 ggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||||||||||||||||||||||  |||||||| ||||||  ||||||| ||||||||    
T  22675402 ggttctaaagtctggtggaccgatcgattttgattcgagatcgggagtcagttctttggc 22675343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 205 - 298
Target Start/End: Original strand, 25991973 - 25992066
Alignment:
Q  205 tctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctcttt 298  Q
    ||||||||||||  |  |||| ||||||| ||  |||||| |||||||||||||| || ||| ||||||||| |||||| |||||||| |||||    
T  25991973 tctggtgtaccgaagatgaggagtgcccttctattttggtgctaaagtctggtgggccaatcgcttttgattcgagatcgagagtcagttcttt 25992066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 26046045 - 26046001
Alignment:
Q  239 tttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    |||||| ||||||||||||| ||||||||||||||||| ||||||    
T  26046045 tttggtcctaaagtctggtgaaccgatcacttttgattcgagatc 26046001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 97 - 159
Target Start/End: Original strand, 8730649 - 8730711
Alignment:
Q  97 cgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtg 159  Q
    |||||||||  |||| | ||||| ||||||||| | ||||| |||||||||||||||||||||    
T  8730649 cgggtccattttcgttgacgctacctcttgtttgagttttgagttgttaaggtgtttagggtg 8730711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 222 - 292
Target Start/End: Complemental strand, 28765700 - 28765630
Alignment:
Q  222 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 292  Q
    ||||||||||||  ||||||  ||||| | |||||||||  |||||||||||||| |||||| ||||||||    
T  28765700 gaggggtgccctaatgatttttttctagattctggtggattgatcacttttgattcgagatcgagagtcag 28765630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 250 - 282
Target Start/End: Original strand, 25341709 - 25341741
Alignment:
Q  250 agtctggtggaccgatcacttttgatttgagat 282  Q
    |||||||||| ||||||||||||||||||||||    
T  25341709 agtctggtgggccgatcacttttgatttgagat 25341741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 159
Target Start/End: Original strand, 27712819 - 27712871
Alignment:
Q  108 tcgtcgtcgctagctcttgtttca-tttttgggttgttaaggtgtttagggtg 159  Q
    |||| ||||||| ||||||||||| ||||||||| | ||||||||||||||||    
T  27712819 tcgttgtcgctacctcttgtttcagtttttgggtggctaaggtgtttagggtg 27712871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 75; Significance: 3e-34; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 37 - 203
Target Start/End: Complemental strand, 16510718 - 16510549
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttc--attt 134  Q
    |||| |||||||||| ||||||||||||||||||||| |||||||  | ||| | ||||||||||||||| |||||||| ||||||||||||||   |||    
T  16510718 tttaagtgaggaggcgggtgtttgttggggtgatttcctttggaggaaacctctcttacacgggtccatgttcgtcgtcactagctcttgtttctgcttt 16510619  T
Q  135 ttgggttgttaaggtgtttagggtgtttggaggatgcgtg-tccgttgcgatgagccttttccttttgat 203  Q
    | |||| ||| ||||||||| || ||||||||| |||||| ||||||| | |||||||||||||||||||    
T  16510618 tcgggtggtttaggtgtttatggagtttggagggtgcgtgttccgttgtgttgagccttttccttttgat 16510549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 42 - 177
Target Start/End: Complemental strand, 20702225 - 20702086
Alignment:
Q  42 gtgaggaggcaggtgtttgttgggg-tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgt-ttcattttt--g 137  Q
    |||||||||| |||||||||||||| |||||||||||||||  |||||||||||| ||||||| || |||||||| |||| |||||| | |||||||  |    
T  20702225 gtgaggaggcgggtgtttgttgggggtgatttcttttggaggtagcctttgttactcgggtccttgttcgtcgtcactagttcttgtatgcattttttgg 20702126  T
Q  138 ggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    | ||||||||||||||||||||||||||||| ||| ||||    
T  20702125 gattgttaaggtgtttagggtgtttggaggaagcgggtcc 20702086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 203 - 298
Target Start/End: Complemental strand, 16510418 - 16510323
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctcttt 298  Q
    |||||||||||||| |||| |||||||||||||| ||||||||||||||||| |||| |||||||||||||||| |||||  |||||||| |||||    
T  16510418 tctctggtgtaccgagggcaaggggtgccctgctaatttggttctaaagtctagtgggccgatcacttttgattcgagattgagagtcagttcttt 16510323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 203 - 363
Target Start/End: Original strand, 3117457 - 3117614
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||| ||||||||||||||||||||||| ||||| |  || ||| |||||| ||||||||||||||||  |||||  ||||||| ||||||  |    
T  3117457 tctctggtgttccgggggcgaggggtgccctgctaatttgttgatatagtatggtgggccgatcacttttgattcaagatcgggagtcagttctttg--a 3117554  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggtt 363  Q
     | |||||||||||| ||| ||||| |||||||||||  |||| |||||||| | ||||||    
T  3117555 ctcaagttggtttttgggc-tttgtgttgtgctctttatgtggttcggaggtcgcgaggtt 3117614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 203 - 369
Target Start/End: Complemental strand, 20701920 - 20701758
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||| |||||||||||| ||||||||||  |  || ||||||  |||||||||||||||| ||||||  |||| || ||||||||     
T  20701920 tctctggtgtaccgggggtgaggggtgcccttctgatttggtcatttagactggtgtgccgatcacttttgattcgagatcgggagttagttctttggc- 20701822  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
     ||||||| | |||| ||||||  || ||   |||||||||||||||||||| ||||||| ||||||    
T  20701821 -ttaagtttggttttgggcttt--ttatggtttctttcggtggatcggaggtcgagaggtagtggaa 20701758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 38 - 177
Target Start/End: Original strand, 12793776 - 12793916
Alignment:
Q  38 ttaggtgaggaggcaggtgtttgttg-gggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcattttt 136  Q
    ||||||||||||   |||| |||||| ||||||||||| ||||||   ||||||||||  |||||||||  |||| ||| ||||||||||||| | || |    
T  12793776 ttaggtgaggagaggggtgattgttgtgggtgatttctattggaggtcgcctttgttattcgggtccatactcgttgtccctagctcttgtttaagttgt 12793875  T
Q  137 gggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    ||||||||||||||||| |||||||| |||| || ||||||    
T  12793876 gggttgttaaggtgttttgggtgttttgagggtgtgtgtcc 12793916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 203 - 276
Target Start/End: Complemental strand, 3880700 - 3880627
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 276  Q
    |||||||| ||||| ||| ||| |||||||| |||||||||| ||||||| |||||| ||||||||||||||||    
T  3880700 tctctggtttaccgagggtgagaggtgcccttctgatttggtcctaaagtttggtgggccgatcacttttgatt 3880627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 203 - 258
Target Start/End: Complemental strand, 15132640 - 15132585
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtg 258  Q
    |||||| ||||| ||||||||||||||||||| |||||| ||||||||||||||||    
T  15132640 tctctgatgtactgggggcgaggggtgccctgttgattttgttctaaagtctggtg 15132585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 215 - 297
Target Start/End: Complemental strand, 32935444 - 32935362
Alignment:
Q  215 cgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctt 297  Q
    |||||| ||||||| |||| |||||||||| || ||||||||||| |||||| ||||||||| ||||||  ||||||| ||||    
T  32935444 cgggggtgaggggttcccttctgatttggtcctgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctt 32935362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 37 - 203
Target Start/End: Complemental strand, 15132947 - 15132778
Alignment:
Q  37 tttaggtgaggaggcaggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtt-tcatttt 135  Q
    |||||||||| |||  |||||||||||||| |||||  ||| |||||||||| |   |||||| |||| | |||||||| |||| |||| ||   |||||    
T  15132947 tttaggtgagcaggtgggtgtttgttggggagattttctttagagacagcctctagcacacggatccacgttcgtcgtcactagttcttattggtatttt 15132848  T
Q  136 tgggttg-ttaaggtgtttagggtg-tttggaggatgcgtgtccgttgcgatgagccttttccttttgat 203  Q
    ||||||| ||||||||||||  | | |||||||| |||||| | |||| ||||||||| |||||||||||    
T  15132847 tgggttgtttaaggtgtttacagagttttggagggtgcgtgcctgttgagatgagcctcttccttttgat 15132778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 223 - 297
Target Start/End: Original strand, 12794098 - 12794173
Alignment:
Q  223 aggggtgccctgctgatttggttctaaagtctggtggaccgatc-acttttgatttgagatcaagagtcagctctt 297  Q
    ||||||| ||| ||| |||||||||||||||| |||| |||||| |||||||||| ||||||| ||||||| ||||    
T  12794098 aggggtgtccttctgttttggttctaaagtctagtgggccgatcaacttttgattcgagatcaggagtcagttctt 12794173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 226 - 297
Target Start/End: Complemental strand, 26216112 - 26216042
Alignment:
Q  226 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctt 297  Q
    |||||||| |||||||| |||||| ||||||||| |||||||||||||||| ||||||  ||||||| ||||    
T  26216112 ggtgcccttctgatttgattctaa-gtctggtgggccgatcacttttgattcgagatcgggagtcagttctt 26216042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 282
Target Start/End: Complemental strand, 26534813 - 26534757
Alignment:
Q  226 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagat 282  Q
    |||| ||| |||||||||| || ||||||||||| |||||||||||||||| |||||    
T  26534813 ggtggccttctgatttggtcctgaagtctggtgggccgatcacttttgattcgagat 26534757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 255 - 301
Target Start/End: Original strand, 13423482 - 13423528
Alignment:
Q  255 ggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||||||||||||||||||| |||||| |||||| | ||||||||    
T  13423482 ggtggaccgatcacttttgattcgagatcgagagtcggttctttggc 13423528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 250 - 283
Target Start/End: Complemental strand, 7546499 - 7546466
Alignment:
Q  250 agtctggtggaccgatcacttttgatttgagatc 283  Q
    ||||||||||||||||||||||||||| ||||||    
T  7546499 agtctggtggaccgatcacttttgattcgagatc 7546466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 207 - 300
Target Start/End: Original strand, 9224010 - 9224102
Alignment:
Q  207 tggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    ||||| |||||||| ||||| ||||||  | | ||||| |||||||||||||| | |||| ||||||||| ||||||  ||||||| |||||||    
T  9224010 tggtggaccgggggtgaggg-tgcccttttaagttggtcctaaagtctggtgggctgatcgcttttgattcgagatcgggagtcagttctttgg 9224102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 236 - 292
Target Start/End: Original strand, 34105410 - 34105466
Alignment:
Q  236 tgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcag 292  Q
    ||||||| ||||| ||| |||||| |||||||||||||||| ||||||  |||||||    
T  34105410 tgatttgtttctagagtttggtgggccgatcacttttgattcgagatcgggagtcag 34105466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 65; Significance: 2e-28; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 203 - 354
Target Start/End: Complemental strand, 35888 - 35741
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggca 302  Q
    |||||||||||||||||||||||||||||  ||| |||||||| || ||||| |||| |||||||||||||||| ||||||  ||||||  ||||||  |    
T  35888 tctctggtgtaccgggggcgaggggtgcctagctaatttggttatatagtctagtgggccgatcacttttgattcgagatcgggagtca-ttctttg--a 35792  T
Q  303 attaagttggttttttggcttttgttttgtgctctttcggtggatcggaggt 354  Q
     |||||||||||||| ||| ||| | ||||||||||||||||||||||||||    
T  35791 cttaagttggtttttgggc-tttatgttgtgctctttcggtggatcggaggt 35741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 53 - 203
Target Start/End: Complemental strand, 36181 - 36028
Alignment:
Q  53 ggtgtttgttggggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcat---ttttgggttgttaaggt 149  Q
    ||||||||||||||||||||| ||| ||  || ||| |||| || |||||||||  ||||||| ||||||||||||| ||   |||||||| ||| ||||    
T  36181 ggtgtttgttggggtgatttcctttagaagcaacctatgtttcaagggtccatgtccgtcgtctctagctcttgttt-atgccttttgggtggtttaggt 36083  T
Q  150 gtttagggtgtttggaggatgcgtgtc-cgttgcgatgagccttttccttttgat 203  Q
    |||||  | ||||| ||| || ||||| ||||| | |||||||||||||||||||    
T  36082 gtttacagagtttgaagggtgagtgtcacgttgtgttgagccttttccttttgat 36028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0200 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0200
Description:

Target: scaffold0200; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 222 - 369
Target Start/End: Original strand, 19366 - 19509
Alignment:
Q  222 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggcaattaagttggttttttggc 321  Q
    |||||||||||| |||||||||| |||||||||||||| |||||||||||||||| ||||||   |||||| ||||||||  | ||||| | |||| |||    
T  19366 gaggggtgcccttctgatttggtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggc--tcaagtttggttttgggc 19463  T
Q  322 ttttgttttgtgctctttcggtggatcggaggttgagaggttgtggaa 369  Q
    |||  || ||   |||||||||||||||||||| ||||| | ||||||    
T  19464 ttt--ttatggtttctttcggtggatcggaggtcgagagttggtggaa 19509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 50; Significance: 2e-19; HSPs: 2)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 32 - 167
Target Start/End: Original strand, 57842 - 57981
Alignment:
Q  32 tgttatttaggtgaggaggcaggtgtttgttgggg--tgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgttt 129  Q
    |||||||||||||||||||  ||||||||||||||  || |||||||||||| |  ||| ||| || |  |||| || |||||||| ||||||| |||||    
T  57842 tgttatttaggtgaggaggtgggtgtttgttggggggtggtttcttttggaggctacctctgtaactcatgtccttgttcgtcgtcactagctcatgttt 57941  T
Q  130 ca--tttttgggttgttaaggtgtttagggtgtttggagg 167  Q
        ||||||||||||||||||||||||||||||||||||    
T  57942 gcgttttttgggttgttaaggtgtttagggtgtttggagg 57981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 226 - 276
Target Start/End: Original strand, 58114 - 58164
Alignment:
Q  226 ggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatt 276  Q
    |||||||| | |||||||| ||||||| |||||| ||||||||||||||||    
T  58114 ggtgcccttcagatttggtcctaaagtttggtgggccgatcacttttgatt 58164  T

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Target: scaffold0050 (Bit Score: 49; Significance: 8e-19; HSPs: 2)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 203 - 299
Target Start/End: Original strand, 36671 - 36767
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttg 299  Q
    |||||||||||||| | | |||||||||||| |||||||||| ||||||||||| || | |||||||||||||| ||||||  ||||||| ||||||    
T  36671 tctctggtgtaccgagagtgaggggtgcccttctgatttggtcctaaagtctggcgggctgatcacttttgattcgagatcgggagtcagttctttg 36767  T

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Target: scaffold0050; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 20 - 168
Target Start/End: Original strand, 36340 - 36495
Alignment:
Q  20 gggggtggtagatgttatttaggtgaggaggcaggtgtttgttgg--ggtgatttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgc 117  Q
    ||||||||| | | || |||||||||||||||||||||||  |||  |||||||||||| ||||   |||| |||||| ||||||| || ||||||||      
T  36340 gggggtggttggttttgtttaggtgaggaggcaggtgttttgtgggtggtgatttctttgggaggttgcctctgttactcgggtccttgttcgtcgtcag 36439  T
Q  118 tagctcttgtt----tcatttttgggttgttaaggtg-tttagggtgtttggagga 168  Q
    |||||||||||    |  |||| |||||||||||||| |||||||||||| |||||    
T  36440 tagctcttgttcacgtttttttggggttgttaaggtgttttagggtgtttagagga 36495  T

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Target: scaffold0119 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 30 - 167
Target Start/End: Complemental strand, 42574 - 42432
Alignment:
Q  30 gatgttat-ttaggtgaggaggcaggtgtttgtt-ggggtgatttcttttggagacagcctttgttacacgggtccatg-gtcgtcgtcgctagctcttg 126  Q
    |||||||| |||||||||||||| |||||||||| ||||||||||||| |||||   |||| | |||| ||||||| ||  |||||||| ||||||||||    
T  42574 gatgttatgttaggtgaggaggcgggtgtttgttgggggtgatttcttctggaggttgcctctattactcgggtccttgtttcgtcgtcactagctcttg 42475  T
Q  127 ttt-cattttt-gggttgttaaggtgtttagggtgtttggagg 167  Q
    ||| | ||||| |||||||||| ||||||| ||||||||||||    
T  42474 tttgcgtttttggggttgttaaagtgtttatggtgtttggagg 42432  T

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Target: scaffold0119; HSP #2
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 42236 - 42157
Alignment:
Q  222 gaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttggc 301  Q
    |||||||||||| ||||||| || |||||||||||||| |||||||||||||||| ||||||   |||||| ||||||||    
T  42236 gaggggtgcccttctgatttagtcctaaagtctggtgggccgatcacttttgattcgagatcggaagtcagttctttggc 42157  T

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Target: scaffold0062 (Bit Score: 35; Significance: 0.0000000002; HSPs: 4)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 71 - 153
Target Start/End: Original strand, 46784 - 46866
Alignment:
Q  71 ttcttttggagacagcctttgttacacgggtccatggtcgtcgtcgctagctcttgtttcatttttgggttgttaaggtgttt 153  Q
    |||||||| || | |||| |||||  |||||||||   ||||||||||||||||||||| | |||||| ||||||||||||||    
T  46784 ttcttttgaaggccgcctctgttattcgggtccatatccgtcgtcgctagctcttgtttgagttttggattgttaaggtgttt 46866  T

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Target: scaffold0062; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 203 - 283
Target Start/End: Original strand, 47057 - 47137
Alignment:
Q  203 tctctggtgtaccgggggcgaggggtgccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatc 283  Q
    ||||||||| |||||||| |||||||||||| |||||| |   || | |||||||| ||| ||||||||||||| ||||||    
T  47057 tctctggtgaaccgggggtgaggggtgcccttctgattagaccctgatgtctggtgaaccaatcacttttgattcgagatc 47137  T

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Target: scaffold0062; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 59349 - 59417
Alignment:
Q  109 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| |||||  | ||| ||||||||||    
T  59349 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgccttgagcatgcgtgtcc 59417  T

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Target: scaffold0062; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 109 - 177
Target Start/End: Original strand, 71457 - 71525
Alignment:
Q  109 cgtcgtcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    ||||||||||||||||||||| | | |||| |||||||||||||| ||||| || |||  |||||||||    
T  71457 cgtcgtcgctagctcttgtttgagtattggattgttaaggtgttttgggtgctttgagcgtgcgtgtcc 71525  T

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Target: scaffold1613 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold1613
Description:

Target: scaffold1613; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 114 - 177
Target Start/End: Complemental strand, 1359 - 1296
Alignment:
Q  114 tcgctagctcttgtttcatttttgggttgttaaggtgtttagggtgtttggaggatgcgtgtcc 177  Q
    |||||||||||||||| | |||||||| |||||| ||||||||||| || |||| || ||||||    
T  1359 tcgctagctcttgtttgagttttgggtcgttaagatgtttagggtgctttgagggtgtgtgtcc 1296  T

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Target: scaffold1613; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 300
Target Start/End: Complemental strand, 1107 - 1037
Alignment:
Q  230 ccctgctgatttggttctaaagtctggtggaccgatcacttttgatttgagatcaagagtcagctctttgg 300  Q
    |||| ||||||||||  | ||||||||||| |||||| ||||||||| ||||||  ||||||| |||||||    
T  1107 cccttctgatttggtcatgaagtctggtgggccgatcgcttttgattcgagatcgggagtcagttctttgg 1037  T

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Target: scaffold0343 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0343
Description:

Target: scaffold0343; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 308 - 354
Target Start/End: Original strand, 5772 - 5818
Alignment:
Q  308 gttggttttttggcttttgttttgtgctctttcggtggatcggaggt 354  Q
    |||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  5772 gttggtttttgggctttgtttttgtgctctttcggtagatcggaggt 5818  T

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