View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7994_low_13 (Length: 307)
Name: NF7994_low_13
Description: NF7994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7994_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 278; Significance: 1e-155; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 1 - 290
Target Start/End: Complemental strand, 37498273 - 37497984
Alignment:
| Q |
1 |
ataatcagaatcatattgaaaggatggaaaagagcattccatagaagattccaccagcttggaaatgaatactcaagtggaacatttggaccattttccc |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37498273 |
ataatcagaatcatattgaaaggatggaaaagagcattccatagaagattccacaagcttggaaatgaatactcaagtggaacatttggaccattttccc |
37498174 |
T |
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| Q |
101 |
gcagcctcctctcagcttcagtaaaacttaagcctgcaaaaaattcaagaacacagttaacacaaaaggggtaaaataacacaaacgaatactcgagggt |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
37498173 |
gcagcctcctctcagcttcagtaaaacttaagcctgcaaaaaattcaagaacacagttaacacaaaagggggaaaataacacaaacgaatactcgagggt |
37498074 |
T |
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| Q |
201 |
agtgtttacttactgatcagaacaatgaaaaaactatattctactgtctagcttacatgtacataagagtagcatagatatgattgtagt |
290 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |
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| T |
37498073 |
agtgtttacttactgatcagaacaatgaaaaaactatattctactgtctagtttacatgtacataagagtagcatagatatgattgtagt |
37497984 |
T |
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