View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7994_low_17 (Length: 252)
Name: NF7994_low_17
Description: NF7994
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7994_low_17 |
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Alignment Details
Target: chr5 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 16 - 231
Target Start/End: Original strand, 31950903 - 31951118
Alignment:
| Q |
16 |
agagatcgagcggaaatgaagacgagattcatcgacatcatcatcttgataactgaatgtatggaaagaatctgagtaatcatttttccatctatgtggt |
115 |
Q |
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| T |
31950903 |
agagatcgagcggaaatgaagacgagattcatcgacatcatcatcttgataactgaatgtatggaaggaatctgagtaatcatttttccatctatgtggt |
31951002 |
T |
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| Q |
116 |
agaagagcagatatctctctattgatcatatttgcaatatcaaaaggatcccaatcagaaatctccaattcttttaccatctccattgcaacatcaatgg |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31951003 |
agaagagcagatatctctctattgatcatatttgcaatatcaaaaggatcccaatcagaaatctccaattcttttaccatctccattgcaacatcaatgg |
31951102 |
T |
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| Q |
216 |
gagtatcagtgagaat |
231 |
Q |
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|||||||||||||||| |
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| T |
31951103 |
gagtatcagtgagaat |
31951118 |
T |
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