View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7996_low_2 (Length: 553)

Name: NF7996_low_2
Description: NF7996
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7996_low_2
NF7996_low_2
[»] chr7 (75 HSPs)
chr7 (4-541)||(40587203-40587741)
chr7 (34-142)||(34139839-34139947)
chr7 (8-142)||(34742392-34742526)
chr7 (7-146)||(42499347-42499486)
chr7 (31-146)||(5537804-5537925)
chr7 (1-114)||(30355229-30355342)
chr7 (8-87)||(17840887-17840966)
chr7 (8-146)||(47776270-47776408)
chr7 (9-146)||(9494804-9494941)
chr7 (31-146)||(46738740-46738855)
chr7 (17-115)||(34623386-34623484)
chr7 (1-89)||(17838645-17838733)
chr7 (1-115)||(28980162-28980277)
chr7 (32-146)||(29593349-29593463)
chr7 (30-115)||(618744-618829)
chr7 (8-117)||(19044261-19044369)
chr7 (8-117)||(20710267-20710375)
chr7 (93-146)||(48829901-48829954)
chr7 (8-139)||(34738319-34738440)
chr7 (10-102)||(47060909-47061000)
chr7 (10-85)||(10705247-10705322)
chr7 (8-91)||(17834480-17834563)
chr7 (1-89)||(9367714-9367803)
chr7 (8-146)||(34622437-34622575)
chr7 (1-115)||(46863334-46863448)
chr7 (9-102)||(37340284-37340377)
chr7 (32-96)||(27453615-27453679)
chr7 (1-53)||(42682025-42682077)
chr7 (30-146)||(45361587-45361703)
chr7 (8-87)||(7066-7145)
chr7 (8-87)||(12210587-12210666)
chr7 (1-84)||(36394928-36395011)
chr7 (1-87)||(41047774-41047860)
chr7 (8-53)||(10098114-10098159)
chr7 (8-57)||(35606816-35606865)
chr7 (14-51)||(37345106-37345143)
chr7 (70-146)||(40590550-40590626)
chr7 (94-146)||(45364265-45364317)
chr7 (31-87)||(46908493-46908549)
chr7 (8-87)||(8044-8123)
chr7 (8-51)||(15070388-15070431)
chr7 (8-51)||(18105406-18105449)
chr7 (32-87)||(27657035-27657090)
chr7 (31-146)||(36186493-36186607)
chr7 (18-89)||(41049196-41049267)
chr7 (8-51)||(41884123-41884166)
chr7 (8-87)||(42583057-42583136)
chr7 (8-51)||(45767858-45767901)
chr7 (75-146)||(46740558-46740628)
chr7 (15-85)||(29592542-29592612)
chr7 (5-55)||(36781443-36781493)
chr7 (11-117)||(46860478-46860584)
chr7 (11-53)||(48590339-48590381)
chr7 (70-146)||(34142659-34142735)
chr7 (12-51)||(5541546-5541585)
chr7 (8-51)||(9365712-9365755)
chr7 (8-51)||(10098399-10098442)
chr7 (8-83)||(14102345-14102420)
chr7 (8-83)||(14412362-14412437)
chr7 (8-51)||(15074225-15074268)
chr7 (8-51)||(30791005-30791048)
chr7 (11-90)||(38555413-38555492)
chr7 (8-51)||(42508024-42508067)
chr7 (32-114)||(39460523-39460605)
chr7 (68-146)||(40323688-40323766)
chr7 (15-53)||(46596916-46596954)
chr7 (100-146)||(46740638-46740684)
chr7 (8-53)||(13645339-13645384)
chr7 (8-45)||(20564153-20564190)
chr7 (8-53)||(29112404-29112449)
chr7 (10-51)||(42795112-42795153)
chr7 (30-87)||(45258023-45258080)
chr7 (11-55)||(10225843-10225887)
chr7 (31-87)||(10524377-10524433)
chr7 (66-146)||(40323206-40323286)
[»] chr4 (96 HSPs)
chr4 (2-146)||(1041873-1042017)
chr4 (31-146)||(50278818-50278933)
chr4 (32-146)||(50274698-50274812)
chr4 (7-146)||(9889932-9890071)
chr4 (1-135)||(28081408-28081541)
chr4 (34-146)||(39588030-39588142)
chr4 (8-135)||(16984158-16984285)
chr4 (11-146)||(16983460-16983595)
chr4 (11-146)||(39590568-39590703)
chr4 (1-146)||(56138185-56138335)
chr4 (8-87)||(21022885-21022964)
chr4 (8-146)||(51492010-51492147)
chr4 (13-146)||(49889621-49889753)
chr4 (1-89)||(55793914-55794003)
chr4 (8-87)||(15995719-15995798)
chr4 (8-87)||(19069184-19069263)
chr4 (8-146)||(8109329-8109467)
chr4 (8-146)||(44051089-44051227)
chr4 (32-146)||(44674103-44674216)
chr4 (11-114)||(11494514-11494616)
chr4 (8-87)||(15999796-15999875)
chr4 (9-76)||(55407791-55407858)
chr4 (11-117)||(955759-955865)
chr4 (1-135)||(958584-958717)
chr4 (8-146)||(4979914-4980052)
chr4 (30-91)||(3403840-3403901)
chr4 (1-89)||(6178100-6178189)
chr4 (1-146)||(29700292-29700437)
chr4 (1-89)||(49094078-49094167)
chr4 (30-114)||(21472503-21472587)
chr4 (31-91)||(38369202-38369262)
chr4 (30-141)||(37394191-37394302)
chr4 (8-87)||(40833607-40833686)
chr4 (11-117)||(51426504-51426610)
chr4 (9-146)||(41023324-41023461)
chr4 (1-89)||(41795346-41795435)
chr4 (1-114)||(44561320-44561433)
chr4 (34-146)||(56304815-56304926)
chr4 (15-146)||(6280795-6280926)
chr4 (8-87)||(14200558-14200637)
chr4 (8-87)||(21015736-21015815)
chr4 (8-91)||(23220671-23220754)
chr4 (8-87)||(46254445-46254524)
chr4 (10-68)||(37022060-37022118)
chr4 (15-117)||(49572904-49573006)
chr4 (1-89)||(21017994-21018083)
chr4 (10-135)||(21470852-21470977)
chr4 (11-56)||(33383833-33383878)
chr4 (8-89)||(50447003-50447084)
chr4 (8-89)||(56565752-56565833)
chr4 (30-90)||(1044538-1044598)
chr4 (8-91)||(26792241-26792325)
chr4 (34-98)||(34154425-34154489)
chr4 (34-146)||(34530792-34530903)
chr4 (70-146)||(37015869-37015945)
chr4 (10-78)||(48256567-48256635)
chr4 (31-87)||(51037488-51037544)
chr4 (8-91)||(28235558-28235641)
chr4 (8-51)||(30726738-30726781)
chr4 (8-51)||(31425315-31425358)
chr4 (8-51)||(37563277-37563320)
chr4 (11-146)||(37959720-37959855)
chr4 (8-51)||(39773437-39773480)
chr4 (8-51)||(40358277-40358320)
chr4 (70-117)||(44049113-44049160)
chr4 (8-51)||(54634012-54634055)
chr4 (11-68)||(19073655-19073712)
chr4 (8-49)||(26932619-26932660)
chr4 (31-135)||(37395211-37395316)
chr4 (8-53)||(48806516-48806561)
chr4 (8-51)||(1089581-1089624)
chr4 (8-87)||(7485658-7485737)
chr4 (8-87)||(18884501-18884580)
chr4 (14-53)||(20208541-20208580)
chr4 (8-51)||(21018067-21018110)
chr4 (11-82)||(34151616-34151687)
chr4 (8-51)||(41793397-41793440)
chr4 (8-51)||(49169094-49169137)
chr4 (9-51)||(11084005-11084047)
chr4 (10-84)||(17342142-17342216)
chr4 (11-53)||(33409554-33409596)
chr4 (11-53)||(33410229-33410271)
chr4 (9-50)||(67626-67667)
chr4 (36-97)||(4768665-4768726)
chr4 (11-52)||(4783678-4783719)
chr4 (8-53)||(9473658-9473703)
chr4 (34-87)||(28084013-28084066)
chr4 (10-51)||(28234449-28234490)
chr4 (8-53)||(38460457-38460502)
chr4 (10-51)||(40354638-40354679)
chr4 (8-53)||(43176625-43176670)
chr4 (10-51)||(49563873-49563914)
chr4 (1-53)||(4786324-4786376)
chr4 (8-56)||(9655906-9655954)
chr4 (31-91)||(16473700-16473760)
chr4 (16-91)||(52529205-52529281)
[»] chr3 (131 HSPs)
chr3 (1-146)||(55385075-55385220)
chr3 (8-118)||(19341591-19341701)
chr3 (1-146)||(34694424-34694569)
chr3 (8-146)||(43478827-43478965)
chr3 (36-146)||(50216879-50216989)
chr3 (4-146)||(43476129-43476272)
chr3 (8-92)||(2743390-2743474)
chr3 (1-89)||(36134318-36134406)
chr3 (4-112)||(41802970-41803078)
chr3 (10-146)||(48250868-48251004)
chr3 (2-117)||(52570557-52570671)
chr3 (32-146)||(16647168-16647282)
chr3 (1-89)||(2271303-2271391)
chr3 (8-115)||(4002502-4002608)
chr3 (31-146)||(41137656-41137771)
chr3 (8-146)||(600541-600679)
chr3 (1-134)||(49219781-49219914)
chr3 (1-89)||(4004793-4004881)
chr3 (10-146)||(47070406-47070542)
chr3 (8-135)||(48246361-48246488)
chr3 (8-146)||(7843014-7843152)
chr3 (12-114)||(11380411-11380513)
chr3 (36-146)||(23443131-23443241)
chr3 (1-87)||(24703405-24703491)
chr3 (10-91)||(14043897-14043978)
chr3 (10-102)||(42756141-42756233)
chr3 (14-146)||(46989485-46989617)
chr3 (70-146)||(51696574-51696650)
chr3 (8-87)||(9429846-9429925)
chr3 (8-91)||(27739564-27739647)
chr3 (8-87)||(34691622-34691701)
chr3 (8-146)||(16484453-16484591)
chr3 (13-87)||(48888738-48888811)
chr3 (37-115)||(55267410-55267488)
chr3 (5-89)||(2647693-2647778)
chr3 (1-114)||(55207653-55207766)
chr3 (8-117)||(6489300-6489405)
chr3 (33-117)||(6505973-6506057)
chr3 (11-87)||(19440253-19440329)
chr3 (10-102)||(29918340-29918432)
chr3 (10-102)||(29967493-29967585)
chr3 (8-127)||(36812793-36812913)
chr3 (32-115)||(596753-596836)
chr3 (8-91)||(4015126-4015209)
chr3 (15-146)||(7247864-7247995)
chr3 (8-87)||(13747716-13747794)
chr3 (8-115)||(14398504-14398611)
chr3 (9-80)||(20918009-20918080)
chr3 (9-80)||(20926971-20927042)
chr3 (8-87)||(24700718-24700797)
chr3 (8-87)||(34543133-34543212)
chr3 (18-117)||(41805682-41805781)
chr3 (8-90)||(8475820-8475902)
chr3 (1-89)||(34049074-34049163)
chr3 (8-146)||(36817518-36817656)
chr3 (8-146)||(42165102-42165239)
chr3 (10-91)||(2062379-2062460)
chr3 (1-114)||(51402388-51402501)
chr3 (1-89)||(54389789-54389878)
chr3 (8-84)||(12897824-12897900)
chr3 (31-87)||(13743290-13743346)
chr3 (31-115)||(14402990-14403074)
chr3 (18-98)||(46344923-46345003)
chr3 (8-51)||(1293410-1293453)
chr3 (8-51)||(3953212-3953255)
chr3 (8-114)||(7839498-7839602)
chr3 (31-142)||(7841063-7841174)
chr3 (8-91)||(11249521-11249604)
chr3 (8-87)||(28816998-28817077)
chr3 (8-67)||(49217112-49217171)
chr3 (11-97)||(49268845-49268931)
chr3 (35-143)||(2745229-2745337)
chr3 (14-82)||(30256006-30256074)
chr3 (8-88)||(42166407-42166487)
chr3 (9-61)||(44227135-44227187)
chr3 (1-53)||(49140837-49140889)
chr3 (8-91)||(4008320-4008403)
chr3 (8-91)||(7941103-7941186)
chr3 (8-51)||(8156541-8156584)
chr3 (10-97)||(28611099-28611186)
chr3 (8-51)||(30943222-30943265)
chr3 (8-51)||(35743579-35743622)
chr3 (8-51)||(41844361-41844404)
chr3 (8-51)||(46697744-46697787)
chr3 (8-51)||(50477213-50477256)
chr3 (8-87)||(50998677-50998756)
chr3 (10-117)||(52567730-52567837)
chr3 (11-53)||(41579724-41579766)
chr3 (72-110)||(55205311-55205349)
chr3 (11-56)||(1294077-1294122)
chr3 (8-45)||(2271395-2271432)
chr3 (30-87)||(4002737-4002794)
chr3 (8-53)||(6143702-6143747)
chr3 (2-115)||(13896867-13896980)
chr3 (1-102)||(41577057-41577158)
chr3 (1-82)||(49609385-49609466)
chr3 (31-84)||(50957686-50957739)
chr3 (35-87)||(19750039-19750091)
chr3 (31-87)||(19988456-19988512)
chr3 (11-99)||(43571685-43571773)
chr3 (74-146)||(46993234-46993306)
chr3 (8-51)||(2950399-2950442)
chr3 (8-51)||(3493622-3493665)
chr3 (8-51)||(3497316-3497359)
chr3 (8-51)||(6745323-6745366)
chr3 (8-87)||(10492024-10492103)
chr3 (31-90)||(11094106-11094164)
chr3 (12-91)||(19842497-19842576)
chr3 (70-117)||(21951793-21951840)
chr3 (8-51)||(49138647-49138690)
chr3 (8-51)||(49144453-49144496)
chr3 (8-51)||(54392025-54392068)
chr3 (70-144)||(66841-66915)
chr3 (13-51)||(3501897-3501935)
chr3 (16-82)||(45507402-45507468)
chr3 (11-53)||(50604420-50604462)
chr3 (8-53)||(10492870-10492915)
chr3 (34-115)||(19454348-19454429)
chr3 (8-53)||(20485528-20485573)
chr3 (11-56)||(34645590-34645635)
chr3 (12-53)||(34712760-34712801)
chr3 (12-49)||(42760210-42760247)
chr3 (10-51)||(46406590-46406631)
chr3 (9-114)||(49196447-49196552)
chr3 (11-83)||(9582548-9582620)
chr3 (32-84)||(26334343-26334395)
chr3 (10-146)||(29929364-29929500)
chr3 (10-146)||(29978518-29978654)
chr3 (68-112)||(33305017-33305061)
chr3 (1-53)||(46347711-46347763)
chr3 (12-84)||(49194953-49195025)
[»] chr6 (64 HSPs)
chr6 (8-146)||(31768691-31768829)
chr6 (8-146)||(29076320-29076458)
chr6 (8-146)||(29109853-29109991)
chr6 (8-146)||(29111293-29111431)
chr6 (8-146)||(11840247-11840385)
chr6 (34-146)||(29061234-29061346)
chr6 (8-146)||(14012372-14012509)
chr6 (42-146)||(29065678-29065782)
chr6 (42-146)||(29074691-29074795)
chr6 (42-146)||(29079455-29079559)
chr6 (42-146)||(29107264-29107368)
chr6 (17-119)||(7361156-7361258)
chr6 (8-116)||(2050997-2051104)
chr6 (1-97)||(13401473-13401569)
chr6 (10-102)||(23958872-23958964)
chr6 (8-139)||(28362728-28362862)
chr6 (42-117)||(2052615-2052689)
chr6 (1-89)||(11691788-11691877)
chr6 (1-89)||(6204821-6204910)
chr6 (5-89)||(22305102-22305187)
chr6 (1-117)||(12783947-12784063)
chr6 (8-84)||(31146373-31146449)
chr6 (8-146)||(31771738-31771867)
chr6 (8-87)||(13388705-13388784)
chr6 (10-117)||(18606012-18606118)
chr6 (31-145)||(31151058-31151172)
chr6 (13-87)||(32643523-32643597)
chr6 (8-65)||(29068263-29068320)
chr6 (8-65)||(29083510-29083567)
chr6 (31-87)||(2109514-2109570)
chr6 (37-117)||(7537165-7537245)
chr6 (8-84)||(8193206-8193282)
chr6 (8-88)||(26351093-26351173)
chr6 (11-127)||(29097828-29097944)
chr6 (8-91)||(9048068-9048151)
chr6 (31-146)||(29286167-29286282)
chr6 (72-146)||(117897-117969)
chr6 (30-87)||(18347038-18347095)
chr6 (3-91)||(9049076-9049164)
chr6 (10-90)||(15888799-15888879)
chr6 (10-102)||(16192751-16192843)
chr6 (31-115)||(18610226-18610309)
chr6 (31-87)||(25554702-25554758)
chr6 (8-91)||(26712040-26712124)
chr6 (8-88)||(32223510-32223590)
chr6 (8-51)||(13382662-13382705)
chr6 (8-51)||(17597521-17597564)
chr6 (8-51)||(28249918-28249961)
chr6 (8-82)||(6760869-6760943)
chr6 (11-53)||(30258315-30258357)
chr6 (16-53)||(17596972-17597009)
chr6 (11-51)||(18351643-18351683)
chr6 (31-146)||(25141099-25141214)
chr6 (32-135)||(3502659-3502761)
chr6 (8-51)||(6207057-6207100)
chr6 (8-51)||(11694024-11694067)
chr6 (11-118)||(19757238-19757345)
chr6 (8-51)||(27616748-27616791)
chr6 (31-114)||(35021283-35021366)
chr6 (68-146)||(11687949-11688027)
chr6 (9-50)||(24088784-24088825)
chr6 (8-48)||(15546386-15546426)
chr6 (15-51)||(24721962-24721998)
chr6 (11-51)||(26712223-26712263)
[»] scaffold0176 (2 HSPs)
scaffold0176 (34-142)||(764-872)
scaffold0176 (70-146)||(3584-3660)
[»] chr5 (85 HSPs)
chr5 (1-139)||(542780-542918)
chr5 (32-146)||(1397371-1397485)
chr5 (8-146)||(34122462-34122600)
chr5 (8-146)||(7762241-7762378)
chr5 (8-146)||(39743145-39743283)
chr5 (8-146)||(41798756-41798894)
chr5 (1-112)||(18307226-18307337)
chr5 (8-146)||(17966883-17967021)
chr5 (8-146)||(41799764-41799902)
chr5 (33-146)||(30887382-30887495)
chr5 (9-146)||(34123933-34124070)
chr5 (8-115)||(7757294-7757401)
chr5 (1-146)||(11345946-11346090)
chr5 (8-146)||(17965787-17965925)
chr5 (1-146)||(20192291-20192436)
chr5 (30-146)||(13568094-13568210)
chr5 (11-115)||(28388519-28388623)
chr5 (13-87)||(5773-5847)
chr5 (8-146)||(25897076-25897214)
chr5 (30-146)||(27867839-27867955)
chr5 (31-135)||(43094596-43094700)
chr5 (8-115)||(25889963-25890070)
chr5 (91-146)||(38407137-38407192)
chr5 (8-146)||(1035122-1035260)
chr5 (4-89)||(30708897-30708983)
chr5 (1-89)||(19037460-19037549)
chr5 (9-102)||(38968077-38968170)
chr5 (1-53)||(25497542-25497594)
chr5 (9-83)||(8702196-8702270)
chr5 (8-146)||(25877560-25877697)
chr5 (5-89)||(8041-8126)
chr5 (30-87)||(8539535-8539592)
chr5 (8-97)||(33995145-33995234)
chr5 (93-145)||(1396233-1396285)
chr5 (31-87)||(3891480-3891536)
chr5 (10-146)||(18538334-18538470)
chr5 (32-135)||(14684-14786)
chr5 (1-99)||(3600321-3600420)
chr5 (10-116)||(4204210-4204314)
chr5 (39-146)||(43093946-43094053)
chr5 (10-112)||(33993252-33993354)
chr5 (13-115)||(42539375-42539477)
chr5 (30-87)||(11348494-11348551)
chr5 (12-145)||(42937131-42937264)
chr5 (8-91)||(13837716-13837800)
chr5 (11-83)||(28387270-28387342)
chr5 (31-83)||(31788131-31788183)
chr5 (11-83)||(34682258-34682330)
chr5 (8-84)||(39742575-39742651)
chr5 (11-102)||(3603148-3603239)
chr5 (8-115)||(7800984-7801091)
chr5 (8-51)||(11029001-11029044)
chr5 (11-89)||(18512652-18512730)
chr5 (8-51)||(28238172-28238215)
chr5 (8-91)||(30192485-30192568)
chr5 (8-82)||(7017514-7017588)
chr5 (34-87)||(13563664-13563717)
chr5 (8-48)||(27659976-27660016)
chr5 (4-87)||(28880318-28880402)
chr5 (8-84)||(29430575-29430651)
chr5 (11-91)||(38408467-38408547)
chr5 (70-146)||(42537139-42537215)
chr5 (8-51)||(540959-541002)
chr5 (70-117)||(7796628-7796675)
chr5 (8-51)||(8577007-8577050)
chr5 (8-51)||(14280897-14280940)
chr5 (8-51)||(19035271-19035314)
chr5 (8-55)||(27532614-27532661)
chr5 (8-51)||(28876676-28876719)
chr5 (30-77)||(37820873-37820920)
chr5 (12-51)||(38408470-38408509)
chr5 (8-51)||(38855708-38855751)
chr5 (11-53)||(13838424-13838466)
chr5 (36-146)||(19228671-19228781)
chr5 (33-87)||(20744015-20744069)
chr5 (10-84)||(29430022-29430096)
chr5 (15-53)||(41201759-41201797)
chr5 (30-79)||(7021877-7021926)
chr5 (8-45)||(31787559-31787596)
chr5 (8-53)||(35671113-35671158)
chr5 (8-53)||(40789204-40789249)
chr5 (10-87)||(41065881-41065958)
chr5 (8-53)||(42098334-42098379)
chr5 (8-87)||(30711156-30711236)
chr5 (11-51)||(37814615-37814655)
[»] chr1 (117 HSPs)
chr1 (8-146)||(9711648-9711786)
chr1 (11-146)||(29438020-29438155)
chr1 (10-146)||(44336191-44336323)
chr1 (32-139)||(51288832-51288939)
chr1 (8-146)||(6562158-6562296)
chr1 (8-146)||(46886385-46886522)
chr1 (10-87)||(6557912-6557989)
chr1 (8-88)||(19161888-19161968)
chr1 (15-146)||(41804037-41804168)
chr1 (8-87)||(44470008-44470087)
chr1 (11-146)||(49924794-49924929)
chr1 (11-114)||(52802100-52802203)
chr1 (31-146)||(52805553-52805668)
chr1 (12-146)||(51271592-51271726)
chr1 (10-117)||(8460096-8460202)
chr1 (31-146)||(29765549-29765664)
chr1 (10-127)||(22345218-22345334)
chr1 (14-146)||(23276111-23276243)
chr1 (30-146)||(27484997-27485113)
chr1 (31-146)||(94348-94462)
chr1 (8-146)||(2425682-2425819)
chr1 (32-146)||(5077879-5077993)
chr1 (8-146)||(48751407-48751545)
chr1 (10-114)||(49927512-49927616)
chr1 (8-91)||(586602-586685)
chr1 (8-87)||(15047279-15047358)
chr1 (31-146)||(21144625-21144739)
chr1 (34-146)||(27487663-27487771)
chr1 (35-146)||(30905709-30905820)
chr1 (9-146)||(11183124-11183261)
chr1 (8-146)||(44598903-44599041)
chr1 (5-89)||(13636116-13636201)
chr1 (1-89)||(19159617-19159706)
chr1 (8-97)||(23359346-23359435)
chr1 (31-91)||(30194414-30194474)
chr1 (8-66)||(9710596-9710654)
chr1 (8-146)||(18609892-18610029)
chr1 (40-146)||(44596799-44596905)
chr1 (1-102)||(13972046-13972145)
chr1 (34-135)||(49426663-49426763)
chr1 (30-146)||(44465534-44465650)
chr1 (8-83)||(4883234-4883309)
chr1 (9-88)||(35258870-35258949)
chr1 (8-51)||(38771662-38771705)
chr1 (8-139)||(19521563-19521685)
chr1 (32-146)||(23913795-23913909)
chr1 (8-90)||(31783712-31783794)
chr1 (68-146)||(32161349-32161427)
chr1 (10-51)||(471095-471136)
chr1 (14-51)||(11197429-11197466)
chr1 (30-87)||(20349454-20349511)
chr1 (11-146)||(26633468-26633600)
chr1 (65-146)||(37014888-37014969)
chr1 (30-87)||(41453835-41453892)
chr1 (31-115)||(8458954-8459037)
chr1 (31-87)||(19914463-19914519)
chr1 (38-146)||(23272787-23272895)
chr1 (31-87)||(30910023-30910079)
chr1 (35-135)||(36908527-36908627)
chr1 (11-87)||(46141779-46141855)
chr1 (8-88)||(46217315-46217395)
chr1 (11-87)||(51289960-51290036)
chr1 (8-51)||(3728768-3728811)
chr1 (8-51)||(3944007-3944050)
chr1 (8-51)||(3993840-3993883)
chr1 (8-51)||(8548666-8548709)
chr1 (75-146)||(26944417-26944488)
chr1 (8-91)||(29424373-29424456)
chr1 (8-91)||(29425333-29425416)
chr1 (30-89)||(49429154-49429213)
chr1 (10-85)||(50113306-50113381)
chr1 (8-51)||(50117843-50117886)
chr1 (8-68)||(50617219-50617281)
chr1 (11-117)||(6437539-6437645)
chr1 (10-112)||(13178131-13178233)
chr1 (68-146)||(20114543-20114621)
chr1 (11-53)||(36072400-36072442)
chr1 (10-135)||(22524076-22524200)
chr1 (8-53)||(38689962-38690007)
chr1 (8-53)||(41909702-41909747)
chr1 (10-115)||(46973173-46973277)
chr1 (37-90)||(48228328-48228381)
chr1 (70-146)||(471122-471198)
chr1 (10-78)||(7981138-7981206)
chr1 (8-84)||(15549860-15549936)
chr1 (31-117)||(22346037-22346119)
chr1 (31-115)||(51666659-51666742)
chr1 (1-56)||(13147524-13147579)
chr1 (12-51)||(15051349-15051388)
chr1 (10-53)||(19054249-19054292)
chr1 (8-51)||(20353932-20353975)
chr1 (8-51)||(26879292-26879335)
chr1 (8-51)||(29622421-29622464)
chr1 (11-49)||(13633904-13633942)
chr1 (11-53)||(16270025-16270067)
chr1 (3-45)||(18974096-18974138)
chr1 (14-115)||(19499115-19499214)
chr1 (68-146)||(46319688-46319766)
chr1 (68-146)||(46320510-46320588)
chr1 (11-57)||(47586237-47586283)
chr1 (8-53)||(1656086-1656131)
chr1 (8-53)||(3941147-3941192)
chr1 (8-53)||(26770550-26770595)
chr1 (8-85)||(27114041-27114118)
chr1 (31-88)||(29352255-29352312)
chr1 (10-91)||(36076557-36076638)
chr1 (14-51)||(38119614-38119651)
chr1 (8-87)||(47653704-47653780)
chr1 (1-77)||(6434755-6434831)
chr1 (42-114)||(19054029-19054101)
chr1 (15-135)||(25040080-25040200)
chr1 (30-78)||(29356684-29356732)
chr1 (7-143)||(29434914-29435050)
chr1 (35-87)||(49857873-49857925)
chr1 (8-44)||(50117774-50117810)
chr1 (70-146)||(50117872-50117948)
chr1 (82-146)||(50617127-50617191)
[»] scaffold0184 (2 HSPs)
scaffold0184 (10-146)||(18292-18428)
scaffold0184 (16-146)||(17969-18099)
[»] scaffold0078 (2 HSPs)
scaffold0078 (10-146)||(54416-54552)
scaffold0078 (16-146)||(54745-54875)
[»] chr8 (92 HSPs)
chr8 (30-146)||(41276879-41276995)
chr8 (11-146)||(3641584-3641719)
chr8 (8-146)||(22550862-22550999)
chr8 (1-146)||(26451424-26451563)
chr8 (8-146)||(41250069-41250206)
chr8 (9-146)||(1114681-1114818)
chr8 (8-139)||(39601649-39601780)
chr8 (1-114)||(42602430-42602543)
chr8 (1-114)||(41858113-41858224)
chr8 (16-146)||(44052231-44052361)
chr8 (9-146)||(34823014-34823151)
chr8 (33-146)||(45454344-45454457)
chr8 (8-115)||(546418-546524)
chr8 (11-146)||(2146957-2147091)
chr8 (8-87)||(35962304-35962383)
chr8 (15-146)||(35966753-35966884)
chr8 (1-146)||(18441431-18441576)
chr8 (13-142)||(39939217-39939346)
chr8 (31-115)||(20549252-20549336)
chr8 (10-102)||(41855350-41855442)
chr8 (11-146)||(34366850-34366984)
chr8 (8-83)||(41016415-41016490)
chr8 (11-109)||(42605234-42605332)
chr8 (11-116)||(18438602-18438707)
chr8 (9-146)||(40077248-40077385)
chr8 (70-135)||(41274574-41274639)
chr8 (10-114)||(18205756-18205860)
chr8 (31-91)||(28617561-28617621)
chr8 (33-117)||(39753020-39753103)
chr8 (10-146)||(7168026-7168162)
chr8 (25-117)||(39751041-39751132)
chr8 (31-87)||(44933856-44933912)
chr8 (8-87)||(2335145-2335224)
chr8 (8-51)||(7344554-7344597)
chr8 (8-51)||(15030917-15030960)
chr8 (8-87)||(27501597-27501676)
chr8 (8-83)||(38604245-38604320)
chr8 (10-84)||(5533024-5533098)
chr8 (34-91)||(22547462-22547519)
chr8 (31-112)||(35389480-35389561)
chr8 (13-98)||(38872932-38873017)
chr8 (2-51)||(41274625-41274674)
chr8 (8-146)||(43262363-43262497)
chr8 (5-61)||(15033141-15033197)
chr8 (10-102)||(22577647-22577739)
chr8 (10-94)||(28646246-28646330)
chr8 (10-94)||(28650830-28650914)
chr8 (31-87)||(34235143-34235199)
chr8 (8-56)||(34892806-34892854)
chr8 (10-86)||(35047156-35047232)
chr8 (31-115)||(41743859-41743943)
chr8 (8-51)||(184549-184592)
chr8 (66-145)||(2713097-2713176)
chr8 (35-146)||(5304168-5304279)
chr8 (8-51)||(8419437-8419480)
chr8 (8-51)||(26663030-26663073)
chr8 (8-51)||(32375684-32375727)
chr8 (8-87)||(32584049-32584128)
chr8 (7-90)||(40740900-40740983)
chr8 (32-146)||(31957772-31957886)
chr8 (32-146)||(41744715-41744829)
chr8 (8-53)||(2712433-2712478)
chr8 (34-135)||(3395841-3395942)
chr8 (31-87)||(1116208-1116264)
chr8 (8-56)||(13782263-13782311)
chr8 (8-52)||(16940273-16940317)
chr8 (8-84)||(21406267-21406343)
chr8 (8-84)||(21800759-21800835)
chr8 (70-146)||(34234521-34234597)
chr8 (11-87)||(36127369-36127445)
chr8 (15-51)||(39491141-39491177)
chr8 (11-91)||(40039684-40039764)
chr8 (31-87)||(43363280-43363336)
chr8 (35-91)||(45409864-45409920)
chr8 (8-51)||(483849-483892)
chr8 (8-51)||(1056198-1056241)
chr8 (8-51)||(17924280-17924323)
chr8 (8-51)||(22014279-22014322)
chr8 (8-51)||(22519559-22519602)
chr8 (8-51)||(36677926-36677969)
chr8 (32-146)||(43188011-43188126)
chr8 (8-87)||(43520773-43520852)
chr8 (8-51)||(45066358-45066401)
chr8 (64-146)||(20546791-20546873)
chr8 (11-53)||(32383205-32383247)
chr8 (11-53)||(32437160-32437202)
chr8 (11-53)||(40039157-40039199)
chr8 (8-53)||(7121783-7121828)
chr8 (31-84)||(44841894-44841947)
chr8 (70-146)||(545873-545948)
chr8 (42-146)||(20854556-20854659)
chr8 (70-146)||(39846990-39847066)
[»] chr2 (96 HSPs)
chr2 (8-146)||(7189948-7190085)
chr2 (8-146)||(23346719-23346856)
chr2 (8-142)||(29397852-29397986)
chr2 (10-146)||(34639313-34639449)
chr2 (8-135)||(23347325-23347451)
chr2 (8-146)||(3943189-3943326)
chr2 (8-146)||(27276371-27276509)
chr2 (31-147)||(1096532-1096648)
chr2 (31-146)||(43870141-43870256)
chr2 (1-146)||(29093818-29093968)
chr2 (25-146)||(1149410-1149531)
chr2 (8-109)||(28342498-28342599)
chr2 (8-117)||(25184827-25184935)
chr2 (10-135)||(41008927-41009051)
chr2 (1-114)||(41500224-41500337)
chr2 (10-117)||(435310-435416)
chr2 (1-89)||(17424126-17424215)
chr2 (8-146)||(32956340-32956488)
chr2 (16-117)||(41497439-41497540)
chr2 (8-92)||(3795329-3795413)
chr2 (1-89)||(34638136-34638223)
chr2 (8-83)||(28477064-28477139)
chr2 (34-146)||(20951069-20951180)
chr2 (11-115)||(35493341-35493445)
chr2 (31-146)||(30803038-30803152)
chr2 (8-87)||(41183221-41183299)
chr2 (32-146)||(24607589-24607703)
chr2 (32-146)||(24749624-24749738)
chr2 (10-115)||(19187222-19187327)
chr2 (18-146)||(25964742-25964877)
chr2 (30-87)||(38945759-38945816)
chr2 (10-91)||(39489176-39489257)
chr2 (30-146)||(1101071-1101187)
chr2 (32-92)||(3803564-3803624)
chr2 (31-87)||(36510876-36510932)
chr2 (8-112)||(41004501-41004604)
chr2 (1-53)||(43982230-43982282)
chr2 (15-146)||(2917621-2917752)
chr2 (8-79)||(24754021-24754092)
chr2 (8-91)||(30273147-30273230)
chr2 (11-114)||(45137433-45137536)
chr2 (8-114)||(9660052-9660158)
chr2 (1-89)||(3937842-3937931)
chr2 (8-53)||(7263048-7263093)
chr2 (8-49)||(30493394-30493435)
chr2 (8-53)||(31974244-31974289)
chr2 (10-115)||(45475409-45475514)
chr2 (1-49)||(2648152-2648200)
chr2 (8-84)||(10424839-10424915)
chr2 (11-135)||(28419357-28419480)
chr2 (10-114)||(34921758-34921861)
chr2 (2-78)||(39393043-39393119)
chr2 (31-91)||(41273268-41273328)
chr2 (8-51)||(7267441-7267484)
chr2 (8-87)||(10425816-10425895)
chr2 (10-101)||(10825201-10825292)
chr2 (8-51)||(22003398-22003441)
chr2 (8-51)||(28468674-28468717)
chr2 (12-51)||(29401608-29401647)
chr2 (8-87)||(29947764-29947843)
chr2 (8-115)||(35490649-35490756)
chr2 (8-51)||(39798476-39798519)
chr2 (70-116)||(41052649-41052695)
chr2 (31-117)||(41181404-41181490)
chr2 (8-50)||(43536136-43536178)
chr2 (8-49)||(5351729-5351770)
chr2 (8-53)||(14456533-14456578)
chr2 (1-102)||(24512149-24512250)
chr2 (8-113)||(24601610-24601715)
chr2 (8-113)||(24612399-24612504)
chr2 (8-53)||(33222647-33222692)
chr2 (8-53)||(43943720-43943765)
chr2 (11-87)||(23409501-23409577)
chr2 (1-49)||(35490741-35490789)
chr2 (8-115)||(82259-82365)
chr2 (8-51)||(3935896-3935939)
chr2 (8-51)||(18000265-18000308)
chr2 (8-51)||(42499819-42499862)
chr2 (8-51)||(44100795-44100838)
chr2 (37-87)||(3086033-3086083)
chr2 (36-102)||(12905531-12905597)
chr2 (10-88)||(12908428-12908506)
chr2 (30-80)||(16583588-16583638)
chr2 (10-147)||(23786061-23786198)
chr2 (57-87)||(34638125-34638155)
chr2 (11-53)||(40221130-40221172)
chr2 (8-90)||(43258730-43258812)
chr2 (1-83)||(43491110-43491192)
chr2 (12-53)||(2983431-2983472)
chr2 (4-49)||(10365785-10365830)
chr2 (93-146)||(29090547-29090600)
chr2 (93-146)||(32952730-32952783)
chr2 (8-52)||(28138612-28138656)
chr2 (31-91)||(36255733-36255793)
chr2 (11-51)||(41565351-41565391)
chr2 (11-51)||(43984301-43984341)
[»] scaffold0201 (1 HSPs)
scaffold0201 (8-115)||(22372-22479)
[»] scaffold0340 (1 HSPs)
scaffold0340 (8-117)||(1178-1286)
[»] scaffold0494 (3 HSPs)
scaffold0494 (8-146)||(769-907)
scaffold0494 (8-51)||(5364-5407)
scaffold0494 (8-49)||(892-933)
[»] scaffold0341 (1 HSPs)
scaffold0341 (8-146)||(17348-17486)
[»] scaffold0199 (2 HSPs)
scaffold0199 (1-89)||(12378-12466)
scaffold0199 (7-146)||(10591-10729)
[»] scaffold1379 (1 HSPs)
scaffold1379 (8-114)||(431-537)
[»] scaffold0361 (1 HSPs)
scaffold0361 (8-146)||(4397-4535)
[»] scaffold0116 (2 HSPs)
scaffold0116 (8-87)||(15952-16031)
scaffold0116 (32-146)||(11239-11353)
[»] scaffold0618 (1 HSPs)
scaffold0618 (18-98)||(3871-3951)
[»] scaffold0794 (1 HSPs)
scaffold0794 (8-87)||(5269-5347)
[»] scaffold0012 (2 HSPs)
scaffold0012 (32-102)||(232530-232600)
scaffold0012 (8-74)||(232829-232895)
[»] scaffold0101 (2 HSPs)
scaffold0101 (5-89)||(36528-36613)
scaffold0101 (8-51)||(41019-41062)
[»] scaffold0219 (2 HSPs)
scaffold0219 (8-115)||(20109-20217)
scaffold0219 (33-119)||(15668-15754)
[»] scaffold0260 (1 HSPs)
scaffold0260 (30-87)||(11777-11834)
[»] scaffold0180 (1 HSPs)
scaffold0180 (10-90)||(15621-15701)
[»] scaffold0744 (1 HSPs)
scaffold0744 (8-51)||(420-463)
[»] scaffold0513 (1 HSPs)
scaffold0513 (8-87)||(8196-8275)
[»] scaffold0504 (1 HSPs)
scaffold0504 (8-91)||(12375-12458)
[»] scaffold0038 (1 HSPs)
scaffold0038 (8-51)||(50080-50123)
[»] scaffold0065 (1 HSPs)
scaffold0065 (8-88)||(65314-65394)
[»] scaffold0293 (1 HSPs)
scaffold0293 (8-51)||(719-762)
[»] scaffold0016 (1 HSPs)
scaffold0016 (8-87)||(69218-69297)
[»] scaffold0014 (1 HSPs)
scaffold0014 (8-51)||(84613-84656)
[»] scaffold0388 (2 HSPs)
scaffold0388 (8-86)||(13906-13984)
scaffold0388 (40-97)||(11739-11796)
[»] scaffold0092 (1 HSPs)
scaffold0092 (8-53)||(54596-54641)
[»] scaffold0268 (1 HSPs)
scaffold0268 (39-87)||(15441-15489)
[»] scaffold0011 (1 HSPs)
scaffold0011 (14-50)||(235933-235969)


Alignment Details
Target: chr7 (Bit Score: 400; Significance: 0; HSPs: 75)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 400; E-Value: 0
Query Start/End: Original strand, 4 - 541
Target Start/End: Complemental strand, 40587741 - 40587203
Alignment:
Q  4 aagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaa 103  Q
    |||||||||||||||||||| | ||| ||||||||| |||||||||||||||| ||||||||||| || || |             || |||||||||||    
T  40587741 aagatcctcggcagttaactactgaggttttcctcgacagttaactgcagtcggatttctaattcctcagcgg-------------gggcaaaaacgtaa 40587655  T
Q  104 attactcgtgtgccacgtccttatcaaatgtgggaacaacaat---------aaaaagaggagcgtgaggaagcgcgtgaggaagagaaggagcgtgtaa 194  Q
    |||||||||||| ||| |||||||||||||||||| |||||||         ||||||||||||||||||||||||||||||||||||||||||||||||    
T  40587654 attactcgtgtgtcacatccttatcaaatgtgggatcaacaattctcataataaaaagaggagcgtgaggaagcgcgtgaggaagagaaggagcgtgtaa 40587555  T
Q  195 ttaacgaaaacagagttccaaagtgttcttgctgtgttggttgctatgcta-----ctactcttctgtctgacacagtgagagtaactcgggaagtgagc 289  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||     ||||||||||||||||||||||||||||||||||||||||||||    
T  40587554 ttaacgaaaacagagttccaaagtgtttttgctgtgttggttgctatgctatgctactactcttctgtctgacacagtgagagtaactcgggaagtgagc 40587455  T
Q  290 taccacagtacatcacaataatccaaaacccatcttcaccaacccacactctctcttttgctagggtttcctctcttcacatttcaacactcttgtaagt 389  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40587454 taccacagtacatcacaataatccaaaacccatcttcaccaacccacactctctcttttgctagggtttcctctcttcacatttcaacactcttgtaagt 40587355  T
Q  390 ttaccctcttcacattttccttctcttttgggtagtttagtttattgttctgcattattgtagtttctgtacttagtacacttgtgttatttattgttat 489  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40587354 ttaccctcttcacattttccttttcttttgggtagtttagtttattgttctgcattattgtagtttctgtacttagtacacttgtgttatttattgttat 40587255  T
Q  490 ggttgaccagtttgttaaatgctttctttcttactagtatagtgatgttttt 541  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40587254 ggttgaccagtttgttaaatgctttctttcttactagtatagtgatgttttt 40587203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 34 - 142
Target Start/End: Complemental strand, 34139947 - 34139839
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatg 133  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  34139947 tcctcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaaggggcaaaaacgtaaattactcgtgtgccacaaccttatcaaatg 34139848  T
Q  134 tgggaacaa 142  Q
    |||||||||    
T  34139847 tgggaacaa 34139839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 142
Target Start/End: Original strand, 34742392 - 34742526
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||||||  ||||||||||| ||| || ||||||||||| ||   ||||||||||||||    
T  34742392 tcctcgacagttaacttccgaggttttcctcggcagttaactgcagtcagatttctaattcctcgacaattaactgccgagggagaaaaaacgtaaatta 34742491  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaa 142  Q
    ||||||||||||  |||||||||||||||||||||    
T  34742492 ctcgtgtgccacagccttatcaaatgtgggaacaa 34742526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 42499486 - 42499347
Alignment:
Q  7 atcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatt 106  Q
    ||||||||||||||||| ||||| |||||||||||||||||||||||||| ||||| ||||| |||||| ||||||| |||||||  |||| ||||  ||    
T  42499486 atcctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttcaaattcctcggcaattaactgtcgaaggggtaaaatcgtatttt 42499387  T
Q  107 actcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||| ||||| |||  |||||||| ||||||||||||||||    
T  42499386 actggtgtgacacaaccttatcacatgtgggaacaacaat 42499347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 5537925 - 5537804
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga------agggacaaaaacgtaaattactcgtgtgccacgtcct 124  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||| ||||||||||      || ||||||||||||||||| |||||||||||  |||    
T  5537925 ttttcctcggcagttaactgcagccgaatttctaattcctcggcagctaactgccgagagccgagagacaaaaacgtaaattattcgtgtgccacagcct 5537826  T
Q  125 tatcaaatgtgggaacaacaat 146  Q
    ||||||||||||||||||||||    
T  5537825 tatcaaatgtgggaacaacaat 5537804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 30355229 - 30355342
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||| |||  |||||||| ||| ||||||||||| ||| ||||| ||    
T  30355229 cagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcagcaattaactgccgagggggcaaaagcg 30355328  T
Q  101 taaattactcgtgt 114  Q
    ||  ||||||||||    
T  30355329 tattttactcgtgt 30355342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 17840887 - 17840966
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||||| ||||||||  ||||||||||||||||||||    
T  17840887 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccga 17840966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 47776408 - 47776270
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||| |  |||| |||||  |||||||||||||| ||| ||| ||||| ||||  |||    
T  47776408 tcctcggcagttaattaccgaggttttcctcggcagttaactgcagccagatttttaatttctcggcagttaactgtcgagggggcaaaatcgtatttta 47776309  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||  | |  |||||||||||||||||||| ||||    
T  47776308 ctcgtgtttctcagccttatcaaatgtgggaacatcaat 47776270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 9494804 - 9494941
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattac 108  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||| ||  ||| |||||| |||||||||||||||||| ||| || | || ||  ||||    
T  9494804 cctcgacagttaactcccgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaactgccgagggggcatatacctattttac 9494903  T
Q  109 tcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    | ||||||| |  |||||| |||||||  |||||||||    
T  9494904 ttgtgtgcctcagccttatgaaatgtgtcaacaacaat 9494941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 46738855 - 46738740
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    |||| |||||||||||||||||| || ||||||||  ||||||||||||||||||||  || ||||||||| | || |||||||| |||  ||||||  |    
T  46738855 tttttctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagagggcaaaaacgtcatttgctcgtgtggcacaaccttatgta 46738756  T
Q  131 atgtgggaacaacaat 146  Q
    ||||||||||||||||    
T  46738755 atgtgggaacaacaat 46738740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 115
Target Start/End: Original strand, 34623386 - 34623484
Alignment:
Q  17 gttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    ||||||| |||||  |||||||||||||||||||||| |||  |  |||||| |||||||||||||||||| | | |||||||||||||||||||||||    
T  34623386 gttaactaccgaggatttcctcggcagttaactgcagccgatctcttaattcctcggcagttaactgccgatgaggcaaaaacgtaaattactcgtgtg 34623484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17838733 - 17838645
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaag 89  Q
    ||||||||| |||||||||||||  |||| |||||||||| |||| ||||||| || ||||||||  ||||||||||||||||||||||    
T  17838733 cagaagatcgtcggcagttaactatcgaggttttcctcggtagtttactgcagccggatttctaaaacttcggcagttaactgccgaag 17838645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 28980162 - 28980277
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcct-cggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaac 99  Q
    ||||| ||||||||||||||||| ||||| ||||||| |||||||||||||||  || || |  ||||||||||||| ||||||| || ||| |||||||    
T  28980162 cagaaaatcctcggcagttaactaccgaggttttccttcggcagttaactgcatccggatattgaattcttcggcagctaactgctgagggggcaaaaac 28980261  T
Q  100 gtaaattactcgtgtg 115  Q
    |||  |||||||||||    
T  28980262 gtattttactcgtgtg 28980277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 29593349 - 29593463
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    |||||||||||||||||||||| || | ||| ||||| |||||||||||||| ||| |||  ||||  |||  ||||| ||||| |||  ||||||||||    
T  29593349 tttcctcggcagttaactgcagccggaattcaaattcctcggcagttaactgtcgagggggtaaaattgtattttactagtgtggcacaaccttatcaaa 29593448  T
Q  132 tgtgggaacaacaat 146  Q
    |||||||||||||||    
T  29593449 tgtgggaacaacaat 29593463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 30 - 115
Target Start/End: Original strand, 618744 - 618829
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    |||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||| |||| |    |||||||||||||||||    
T  618744 attttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaggggatatttgcgtaaattactcgtgtg 618829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 19044369 - 19044261
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||  |||||||||||| |||||||||||||  |||| ||||| |||||| |||||||||||  | |||||||||||  |||    
T  19044369 tcctcggcagttaactaccgaagttttcctcggcaattaactgcagtcg-gtttcaaattcctcggcaattaactgccgagtgaacaaaaacgtatttta 19044271  T
Q  108 ctcgtgtgcc 117  Q
    ||| ||||||    
T  19044270 ctcatgtgcc 19044261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 20710267 - 20710375
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||  |||||||||||| |||||||||||||  |||| ||||| |||||| |||||||||||  | |||||||||||  |||    
T  20710267 tcctcggcagttaactaccgaagttttcctcggcaattaactgcagtcg-gtttcaaattcctcggcaattaactgccgagtgaacaaaaacgtatttta 20710365  T
Q  108 ctcgtgtgcc 117  Q
    ||| ||||||    
T  20710366 ctcatgtgcc 20710375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 48829954 - 48829901
Alignment:
Q  93 caaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  48829954 caaaaacgtaaattactcgtgtgccacaaccttatcaaatgtgggaacaacaat 48829901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 34738440 - 34738319
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||| |  ||||||||||| |          ||||||| ||  |||||||||||||||    
T  34738440 tcctcggcagttaactaccgaggttttcctcggcatttaactgcagccagatttctaattcct----------ctgccgagggagcaaaaacgtaaatta 34738351  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaa 139  Q
    ||||||||||||  ||||||||||||| ||||    
T  34738350 ctcgtgtgccacagccttatcaaatgtaggaa 34738319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 47061000 - 47060909
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    |||||||||||||| ||||| ||||||||||||||||||| ||| || ||||  ||||| ||| |||||||||||||| ||| ||||||||||    
T  47061000 ctcggcagttaactaccgaggttttcctcggcagttaactacagccg-attttgaattcctcgacagttaactgccgagggggcaaaaacgta 47060909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 10705322 - 10705247
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgcc 85  Q
    ||||||||||||||||| || |||| |||||||||||||||||| ||| ||| |||||  ||||||||||||||||    
T  10705322 ctcggcagttaactcccaaggtttttctcggcagttaactgcagccgattttttaatttctcggcagttaactgcc 10705247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 17834563 - 17834480
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||||| ||||  ||||||||||||||||||||| | ||  || ||||  ||||||||||||||||||||||||    
T  17834563 tcctcggcagttaactaccgaagttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaaggg 17834480  T

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Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 9367714 - 9367803
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt---ctaattcttcggcagttaactgccgaag 89  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||||| || ||||   | |||  |||||||||||||||||||||    
T  9367714 cagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagcaaat--ttcggcagttaactgccgaag 9367803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 34622575 - 34622437
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||| ||| ||||||| |||||  |||||||| ||||||||||||||||  ||  |||||| || ||||||||||| | | ||| |||||||||||||||    
T  34622575 tccttggctgttaactaccgaggatttcctcgacagttaactgcagtcggtttcttaattcctctgcagttaactgtcaagggggcaaaaacgtaaatta 34622476  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||||| |  ||||||  ||||||  |||||||||    
T  34622475 cttgtgtgcctcagccttatgcaatgtgtcaacaacaat 34622437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 115
Target Start/End: Original strand, 46863334 - 46863448
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||| ||||||||||||| | ||||||||| |  |||||||||||||| ||  |||  ||||  |||||||||||||||||| ||| ||||||||    
T  46863334 cagaagatcttcggcagttaactacagagattttcgttcgcagttaactgcagccggtttttcaatttctcggcagttaactgccgatggggcaaaaacg 46863433  T
Q  101 taaattactcgtgtg 115  Q
    ||  ||||| |||||    
T  46863434 tattttacttgtgtg 46863448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 37340377 - 37340284
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    ||||||||||||||| ||||| |||| |||||||||||||||||  ||  |||  ||||| ||| |||||||||| ||||| ||||||||||||    
T  37340377 cctcggcagttaactaccgaggtttttctcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcgaagagacaaaaacgta 37340284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 96
Target Start/End: Original strand, 27453615 - 27453679
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaa 96  Q
    |||||||||||||||||||||| || |||| |||||| |||||||||||||||||| ||| ||||    
T  27453615 tttcctcggcagttaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaa 27453679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 42682077 - 42682025
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||||||||||| | ||||| |||||||||||||||||||||||    
T  42682077 cagaagatcctcggcagttaattaccgaggttttcctcggcagttaactgcag 42682025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 45361703 - 45361587
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatca 129  Q
    ||||| |||||||||||||||||| || |||| |||||| ||| |||||||||||||| ||  ||||||| ||  |||||| |||  |    ||||||||    
T  45361703 atttttctcggcagttaactgcagccggatttttaattcctcgtcagttaactgccgagggagcaaaaacatattttactcatgtttcttagccttatca 45361604  T
Q  130 aatgtgggaacaacaat 146  Q
    |||||||||||||||||    
T  45361603 aatgtgggaacaacaat 45361587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 7145 - 7066
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  |||||| |||||||||||||    
T  7145 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccga 7066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 12210587 - 12210666
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||| | || ||||||||  ||||||||||||||||||||    
T  12210587 tcctcggtagtttactgccgaagttttcctcggcagttaactgcggccgtatttctaaaacttcggcagttaactgccga 12210666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 36394928 - 36395011
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    |||||||||||||| |||||||| ||||| |||||||||||| |||| ||||||||  ||   |||||||||||| ||||||||    
T  36394928 cagaagatcctcggtagttaactaccgaggttttcctcggcacttaattgcagtcggtttgtgaattcttcggcaattaactgc 36395011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 41047860 - 41047774
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||||||| ||||  ||||||||||||||||||| ||  ||| | |  |||||||| |||||||||| ||||    
T  41047860 cagaagatcctcggcagttaactaccgaagttttcctcggcagttaactacacccgattattaaattcttctgcagttaactaccga 41047774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 10098114 - 10098159
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||| ||||||||||||||| |||||||||||||||||||||||    
T  10098114 tcctcgtcagttaactcccgaggttttcctcggcagttaactgcag 10098159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 57
Target Start/End: Complemental strand, 35606865 - 35606816
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcga 57  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| |||||    
T  35606865 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgtcga 35606816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 37345143 - 37345106
Alignment:
Q  14 gcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||||||||||||||||||||||||||||    
T  37345143 gcagttaactcccgagattttcctcggcagttaactgc 37345106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 40590550 - 40590626
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||||||| ||| ||||||||||  ||| ||||||  | |  |||||||||||||||||||||||||    
T  40590550 tcggcagttaactgccgagggggcaaaaacgtattttattcgtgtttctcagccttatcaaatgtgggaacaacaat 40590626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 94 - 146
Target Start/End: Original strand, 45364265 - 45364317
Alignment:
Q  94 aaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||| ||||||||||||||||||||||| || ||||||||||||| ||||||    
T  45364265 aaaaaggtaaattactcgtgtgccacgtctttttcaaatgtgggaataacaat 45364317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 46908493 - 46908549
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||||||| || ||||||||  ||||| ||||||||||||||    
T  46908493 ttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccga 46908549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 8044 - 8123
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  |||| | |||||||||||||    
T  8044 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttctgtagttaactgccga 8123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 15070431 - 15070388
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  15070431 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 15070388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 18105449 - 18105406
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  18105449 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 18105406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 32 - 87
Target Start/End: Complemental strand, 27657090 - 27657035
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||| || ||||||||  ||| ||||||||||||||||    
T  27657090 tttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccga 27657035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 36186493 - 36186607
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    ||||||||||||||||||||||  ||  |||| ||||| |||||| ||||||||||| ||| ||||| ||||  ||||||||||| |||  ||||||  |    
T  36186493 ttttcctcggcagttaactgcaaccgg-tttcgaattcctcggcatttaactgccgagggggcaaaagcgtattttactcgtgtgacacagccttatgca 36186591  T
Q  131 atgtgggaacaacaat 146  Q
    |||||  |||||||||    
T  36186592 atgtgtcaacaacaat 36186607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 41049196 - 41049267
Alignment:
Q  18 ttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaag 89  Q
    |||||| ||||| ||||||||||||||||||||||| ||| | |  ||||||||| ||||||||| ||||||    
T  41049196 ttaactaccgaggttttcctcggcagttaactgcagccgattattgaattcttcgacagttaactaccgaag 41049267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 41884123 - 41884166
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  41884123 tcctcggcagttaacttccgaggttttcctcggcagttaactgc 41884166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 42583057 - 42583136
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||||  ||||||||||||||    
T  42583057 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttctacagttaactgccga 42583136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 45767858 - 45767901
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  45767858 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 45767901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 146
Target Start/End: Original strand, 46740558 - 46740628
Alignment:
Q  75 agttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||||| |||||| |||||||||| | |||||| |||| |||  |||||||||||||||||||||||||    
T  46740558 agttaactgtcgaagg-acaaaaacgtcatttactcttgtgtcacagccttatcaaatgtgggaacaacaat 46740628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 15 - 85
Target Start/End: Complemental strand, 29592612 - 29592542
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgcc 85  Q
    ||||||||| ||||  ||||| ||||||||||| |||||||| ||||| ||||| ||| ||||||||||||    
T  29592612 cagttaactaccgaagttttcatcggcagttaattgcagtcggatttcaaattcctcgacagttaactgcc 29592542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 36781443 - 36781493
Alignment:
Q  5 agatcctcggcagttaactcccgagattttcctcggcagttaactgcagtc 55  Q
    |||| |||||||||||||| ||||| |||||||||| ||||||||||||||    
T  36781443 agattctcggcagttaactgccgaggttttcctcgggagttaactgcagtc 36781493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 46860584 - 46860478
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||| ||| ||||   |||||||||||||||  |||  ||||| ||| |||||||||||||| ||| ||||| ||||  |||||     
T  46860584 tcggcagttaactgccgaggtttgcctcaatagttaactgcagtcggtttttcaattcctcgacagttaactgccgagggggcaaaagcgtattttactt 46860485  T
Q  111 gtgtgcc 117  Q
    |||||||    
T  46860484 gtgtgcc 46860478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 48590339 - 48590381
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| |||||||||||||||| ||||||||||||    
T  48590339 tcggcagttaactgccgagattttcctcggtagttaactgcag 48590381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 34142659 - 34142735
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||||| | |||  |||| ||||  ||||| |||||||||  ||||||| |||||||||||||||||    
T  34142659 tcggcagttaactgcctagggggaaaaatcgtattttactagtgtgccactaccttatcgaatgtgggaacaacaat 34142735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 5541585 - 5541546
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  5541585 cggcagttaactcccgaggatttcctcggcagttaactgc 5541546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 9365755 - 9365712
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  9365755 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 9365712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 10098442 - 10098399
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  10098442 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 10098399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 14102345 - 14102420
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    |||||||||||||||| ||||  ||||||||||||||||| ||||| ||| | | |||   |||||||||||||||    
T  14102345 tcctcggcagttaactgccgaagttttcctcggcagttaattgcagccgattctttaaaatttcggcagttaactg 14102420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 14412362 - 14412437
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    |||||||||||||||| ||||  ||||||||||||||||| ||||| ||| | | |||   |||||||||||||||    
T  14412362 tcctcggcagttaactgccgaagttttcctcggcagttaattgcagccgattctttaaaatttcggcagttaactg 14412437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 15074225 - 15074268
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||    
T  15074225 tcctcgacagttaactaccgaggttttcctcggcagttaactgc 15074268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 30791005 - 30791048
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||    
T  30791005 tcctcggcagttaactaccgaggttttcctcggtagttaactgc 30791048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 90
Target Start/End: Original strand, 38555413 - 38555492
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagg 90  Q
    ||||||||||||| ||||  |||||||||||||||||||||||  |  | | |||   ||||||||||||||||||||||    
T  38555413 tcggcagttaactgccgaagttttcctcggcagttaactgcagctggttctttaaaatttcggcagttaactgccgaagg 38555492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 42508024 - 42508067
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| | |||||||||||| ||||||||||||    
T  42508024 tcctcggcagttaactactgagattttcctcagcagttaactgc 42508067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 32 - 114
Target Start/End: Complemental strand, 39460605 - 39460523
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgt 114  Q
    ||||||| |||||||||||||| || |||| |||||| |||||| | |||||||||  ||| |||| ||||  ||||||||||    
T  39460605 tttcctcagcagttaactgcagccggatttttaattcctcggcaatcaactgccgagaggataaaatcgtattttactcgtgt 39460523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 40323688 - 40323766
Alignment:
Q  68 cttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||| |||||||||||| |||| ||||||||| | ||||| ||||| |||  ||||||  |||||||||||| ||||    
T  40323688 cttcggtagttaactgccgcaggggcaaaaacgtcatttacttgtgtggcacagccttatgtaatgtgggaacagcaat 40323766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 46596954 - 46596916
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||||  |||||||||||||||||||||||    
T  46596954 cagttaactcccgaagttttcctcggcagttaactgcag 46596916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 100 - 146
Target Start/End: Complemental strand, 46740684 - 46740638
Alignment:
Q  100 gtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||| ||||| |||  |||||||||||||||||||||||||    
T  46740684 gtaaattactagtgtgtcacagccttatcaaatgtgggaacaacaat 46740638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 13645339 - 13645384
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| || |  |||||||||||||||||||||||    
T  13645339 tcctcggcagttaactgcctaagttttcctcggcagttaactgcag 13645384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Original strand, 20564153 - 20564190
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagtt 45  Q
    |||||||||||||||||||||| ||||| |||||||||    
T  20564153 tcctcggcagttaactcccgaggttttcttcggcagtt 20564190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 29112449 - 29112404
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||| |||||||||| ||||  |||||||||||||||||||||||    
T  29112449 tcctcagcagttaactgccgaagttttcctcggcagttaactgcag 29112404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 42795112 - 42795153
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||| ||||  |||||||||||||||||||||    
T  42795112 ctcggcagttaactgccgaagttttcctcggcagttaactgc 42795153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 45258023 - 45258080
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||||| || ||||||||   ||  |||||||||||||||    
T  45258023 attttcctcggcagttaactgcagccgtatttctaaaatttatgcagttaactgccga 45258080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 55
Target Start/End: Original strand, 10225843 - 10225887
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtc 55  Q
    |||| |||||||| |||||||||||||||| |||||||| |||||    
T  10225843 tcggtagttaactgccgagattttcctcggtagttaacttcagtc 10225887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 10524377 - 10524433
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||  |||  |||||||  ||||| ||||||||||||||    
T  10524377 ttttcctcggcagttaactgccatcggttttctaaaacttcgacagttaactgccga 10524433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 66 - 146
Target Start/End: Complemental strand, 40323286 - 40323206
Alignment:
Q  66 ttcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||||| ||||| |||| |||||| || | |||||| |||| |||  ||||||  |||||||||||||||||    
T  40323286 ttcttcggtagttaattgccgcaggggcaaaaatgtcatttactcatgtggcacagccttatgtaatgtgggaacaacaat 40323206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 101; Significance: 8e-50; HSPs: 96)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 2 - 146
Target Start/End: Complemental strand, 1042017 - 1041873
Alignment:
Q  2 agaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgt 101  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||  || |||||| ||    
T  1042017 agaagatcctcggcagttaactaccgagatttttctcggcagttaactgcagtcggatttctaattcctcggcagttaactgccgatcgggcaaaaaagt 1041918  T
Q  102 aaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||||||||| ||||  |||||||||||||||||||||||||    
T  1041917 aaattactcgtgtaccacagccttatcaaatgtgggaacaacaat 1041873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 50278818 - 50278933
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    ||||||||||||||||||||||| || ||||||||||| ||| |||||||||| ||| |||||||||||||||||||||||||||||||  |||||||||    
T  50278818 ttttcctcggcagttaactgcagccggatttctaattcatcgacagttaactgtcgaggggacaaaaacgtaaattactcgtgtgccacaaccttatcaa 50278917  T
Q  131 atgtgggaacaacaat 146  Q
    ||||||||||||||||    
T  50278918 atgtgggaacaacaat 50278933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 50274812 - 50274698
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    |||||||||||||||||||||| || ||||||||||| |||||||||||||||||| ||| |||||||||||||||||||||||||||  || |||||||    
T  50274812 tttcctcggcagttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaacgtaaattactcgtgtgccacagccctatcaaa 50274713  T
Q  132 tgtgggaacaacaat 146  Q
    |||||||||||||||    
T  50274712 tgtgggaacaacaat 50274698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 9890071 - 9889932
Alignment:
Q  7 atcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatt 106  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||| |||  |||| ||||  ||    
T  9890071 atcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttt 9889972  T
Q  107 actcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||| ||||| |||  |||||||| ||||||||||||||||    
T  9889971 actggtgtggcacagccttatcacatgtgggaacaacaat 9889932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 135
Target Start/End: Complemental strand, 28081541 - 28081408
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||| || ||||||  ||||||||||||||||||||||||||||||| ||||||||  |||||||||||||||||||||||| ||||||||    
T  28081541 cagaagatcctcgacacttaactaacgagattttcctcggcagttaactgcagtcggatttctaaaacttcggcagttaactgccgaaggg-caaaaacg 28081443  T
Q  101 taaattactcgtgtgccacgtccttatcaaatgtg 135  Q
      | |||||||||||  ||  ||||||||||||||    
T  28081442 ccatttactcgtgtggtacagccttatcaaatgtg 28081408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 39588142 - 39588030
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatg 133  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||| ||||||||| | ||||||||||| ||| |||||||  |||     
T  39588142 tcctcggcagttaactgcagtcgaatttctaattcctcggcagttaactgccgagggggcaaaaacgtcatttactcgtgtgacacatccttatgcaata 39588043  T
Q  134 tgggaacaacaat 146  Q
    || ||||||||||    
T  39588042 tgagaacaacaat 39588030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 16984158 - 16984285
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||| || ||||||||  |||||||||||||||||||| |||  |||||||| | |||    
T  16984158 tcctcggcagttaactatcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggtaaaaacgtcattta 16984257  T
Q  108 ctcgtgtgccacgtccttatcaaatgtg 135  Q
    |||||||| |||  ||||||||||||||    
T  16984258 ctcgtgtggcacagccttatcaaatgtg 16984285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 16983595 - 16983460
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||| |||| ||||||||||||||| || || ||||||||  |||||||||||||||||||| |||  |||||||| | ||||||    
T  16983595 tcggcagttaactaccgaggtttttctcggcagttaactgtagccggatttctaaaacttcggcagttaactgccgagggggtaaaaacgtcatttactc 16983496  T
Q  111 gtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||| |||  ||||||||||||||  |||||||||    
T  16983495 gtgtggcacagccttatcaaatgtgtaaacaacaat 16983460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 39590568 - 39590703
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||| |||||||||||||||||||||||  | ||||||||  |||||||||||||||||||| ||| ||||||| | | ||||||    
T  39590568 tcggcagttaactaccgaggttttcctcggcagttaactgcagctgtatttctaaaacttcggcagttaactgccgagggggcaaaaacatcatttactc 39590667  T
Q  111 gtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||| |||  ||||||  ||||||| |||| ||||    
T  39590668 gtgtggcacagccttatataatgtggaaacagcaat 39590703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 56138335 - 56138185
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatt-----tctaattcttcggcagttaactgccgaagggacaa 95  Q
    ||||||||||||||||||||||| | ||| ||||||||||||||||||||||| || |||     | |||||  |||||||||||||| ||||||| |||    
T  56138335 cagaagatcctcggcagttaactactgaggttttcctcggcagttaactgcagccggatttttaatttaatttctcggcagttaactgtcgaaggggcaa 56138236  T
Q  96 aaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||  ||||| ||||| |||  |||||||||||||||||||| ||||    
T  56138235 aatcgtattttactagtgtggcacaaccttatcaaatgtgggaacagcaat 56138185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 21022885 - 21022964
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||    
T  21022885 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 21022964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 51492147 - 51492010
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||||| || ||||||||  ||||| ||||||| ||||| ||   ||||||||| | |||    
T  51492147 tcctcggcagttaactaccgaggttttcctaggcagttaactgcagccggatttctaaaacttcgacagttaattgccg-agaagcaaaaacgtcattta 51492049  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  ||||||  |||||||||||||||||    
T  51492048 ctcgtgtggcacaaccttatgtaatgtgggaacaacaat 51492010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 13 - 146
Target Start/End: Complemental strand, 49889753 - 49889621
Alignment:
Q  13 ggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgt 112  Q
    ||||||||||||||||| ||||||||||||||||||||||  |  ||||||||  ||||| |||||||||||||| | ||||||||  | ||||||||||    
T  49889753 ggcagttaactcccgag-ttttcctcggcagttaactgcaaccagatttctaaaacttcgacagttaactgccgaggagacaaaaatatcaattactcgt 49889655  T
Q  113 gtgccacgtccttatcaaatgtgggaacaacaat 146  Q
     ||||||  ||||||  ||||||||||| |||||    
T  49889654 atgccacaaccttatgcaatgtgggaacgacaat 49889621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 55794003 - 55793914
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || |||| | ||   |||||||||||||||||||||    
T  55794003 cagaagatcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 55793914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 15995798 - 15995719
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| ||||| |||||| |||||||||||    
T  15995798 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccga 15995719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 19069263 - 19069184
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| ||||| |||||| |||||||||||    
T  19069263 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcatttaactgccga 19069184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 8109467 - 8109329
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||| |||||||||||||||| |||||||||||||||||||| || || || | |||||| ||| ||||||||| || | |||  |||| ||||  |||    
T  8109467 tcctcagcagttaactcccgaggttttcctcggcagttaactgtagccggatatttaattcctcgacagttaactaccaagggggtaaaatcgtatttta 8109368  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||  | |  |||||||||||||||||||||||||    
T  8109367 ctcgtgtttctcagccttatcaaatgtgggaacaacaat 8109329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 44051089 - 44051227
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||| ||  ||  || ||| |||||||||||| ||||| ||| |||||||||||||||    
T  44051089 tcctcggcagttaactaccgaggatttcctcgggagttaactgcagccggtttcttatttcctcggcagttaaccgccgatggggcaaaaacgtaaatta 44051188  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||||| |  ||||||  ||||||  |||||||||    
T  44051189 ctggtgtgcctcagccttatgcaatgtgtcaacaacaat 44051227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 44674216 - 44674103
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    |||||||||||||||||||||| ||  ||||| |  |||||||||||||||||| ||||| ||||||||| | ||||||||||| |||  ||||||  ||    
T  44674216 tttcctcggcagttaactgcagccgggtttcttaaacttcggcagttaactgcc-aaggggcaaaaacgtcatttactcgtgtggcacaaccttatgtaa 44674118  T
Q  132 tgtgggaacaacaat 146  Q
    |||||||||||||||    
T  44674117 tgtgggaacaacaat 44674103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 11494616 - 11494514
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| ||  |||  ||||| ||| ||||||| |||||| ||||||||||||||  ||||||    
T  11494616 tcggcagttaactaccgaggttttcctcggcagttaactgcagccg-gttttgaattcctcgacagttaattgccgaggggacaaaaacgtattttactc 11494518  T
Q  111 gtgt 114  Q
    ||||    
T  11494517 gtgt 11494514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 15999796 - 15999875
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||| || ||||| ||||  ||||||||||||||||||    
T  15999796 tcctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttcaaatttctcggcagttaactgccga 15999875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 9 - 76
Target Start/End: Original strand, 55407791 - 55407858
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcag 76  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| || |||| |||||| |||||||    
T  55407791 cctcggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctcggcag 55407858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 955865 - 955759
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||| |||| |||||||||||||||||| ||| |||  ||||| || ||||||||||||| ||| | ||||||||||  |||||     
T  955865 tcggcagttaactaccgaggtttttctcggcagttaactgcagccgatttttgaattcctcagcagttaactgccaaagaggcaaaaacgtattttactt 955766  T
Q  111 gtgtgcc 117  Q
    |||||||    
T  955765 gtgtgcc 955759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 135
Target Start/End: Original strand, 958584 - 958717
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||  |||  ||||| || ||||||||||| |||  |||||||||||    
T  958584 cagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcatc-gcagttaactgtcgagaggacaaaaacg 958682  T
Q  101 taaattactcgtgtgccacgtccttatcaaatgtg 135  Q
    ||  |||||  |||||| |  |||||| |||||||    
T  958683 tattttacttatgtgcctcagccttataaaatgtg 958717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 4979914 - 4980052
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||| | ||||||| |||||||||||||| ||  |||  || || ||| |||||||||||||| ||   ||||||||||||||    
T  4979914 tcctcggcagttaactaccgataatttcctcagcagttaactgcagccggtttttgaaatcgtcgacagttaactgccgagggaggaaaaacgtaaatta 4980013  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||| |  ||||||  ||||||  |||||||||    
T  4980014 ctcgtgtgcctcaaccttatgcaatgtgtcaacaacaat 4980052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 30 - 91
Target Start/End: Complemental strand, 3403901 - 3403840
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||||||    
T  3403901 attttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggg 3403840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 6178100 - 6178189
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt-ctaattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||   ||   |||||||||||||||||||||    
T  6178100 cagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 6178189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 29700292 - 29700437
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||| |||||| |||||| ||||| ||||||||||||||||||||||| ||  | |  ||||| || ||||||||||| ||| | ||||||| ||    
T  29700292 cagaagatcatcggcaattaactaccgaggttttcctcggcagttaactgcagccggttattgaattcctcagcagttaactgtcgaggagacaaaagcg 29700391  T
Q  101 taaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||  ||||| ||||||| |  |||||| |||||||  |||||||||    
T  29700392 tattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaat 29700437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 49094167 - 49094078
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt-ctaattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||   ||   |||||||||||||||||||||    
T  49094167 cagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 49094078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 30 - 114
Target Start/End: Original strand, 21472503 - 21472587
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgt 114  Q
    |||||||||||||||||||||||| ||| |||  ||||| |||||||||||||||||| | | ||||||||||  ||||||||||    
T  21472503 attttcctcggcagttaactgcagccgatttttgaattcctcggcagttaactgccgaggcggcaaaaacgtattttactcgtgt 21472587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 38369202 - 38369262
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||    
T  38369202 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaaggg 38369262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 30 - 141
Target Start/End: Complemental strand, 37394302 - 37394191
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatca 129  Q
    |||| ||||||||||||||||||  || ||||| ||||| ||| |||||||||||||||| | ||||| ||||  ||||| ||||| |||  || |||||    
T  37394302 atttacctcggcagttaactgcatccggatttcaaattcctcgacagttaactgccgaagaggcaaaatcgtattttactagtgtggcacaaccatatca 37394203  T
Q  130 aatgtgggaaca 141  Q
    ||||||||||||    
T  37394202 aatgtgggaaca 37394191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 40833607 - 40833686
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||    
T  40833607 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 40833686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 11 - 117
Target Start/End: Complemental strand, 51426610 - 51426504
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| | ||| |||| ||||||| |||||||||| ||| |||  ||||| ||| |||||||||| |||| |||||||||||||  |||||     
T  51426610 tcggcagttaactactgaggtttttctcggcaattaactgcagccgatttttgaattcctcgacagttaactgtcgaaaggacaaaaacgtattttactt 51426511  T
Q  111 gtgtgcc 117  Q
    |||||||    
T  51426510 gtgtgcc 51426504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 41023461 - 41023324
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattac 108  Q
    ||||||||||||||| |||||  ||||||| |||||||||||||| || ||||| ||||  |||||||||||||||| | | |  |||| ||||  |||     
T  41023461 cctcggcagttaactaccgaggatttcctcagcagttaactgcagccggatttcaaatttctcggcagttaactgccaaggaggtaaaatcgtattttat 41023362  T
Q  109 tcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    | ||||| ||   |||||||| ||||||||||||||||    
T  41023361 tggtgtggcagagccttatcacatgtgggaacaacaat 41023324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 41795346 - 41795435
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt-ctaattcttcggcagttaactgccgaag 89  Q
    |||||||||||||||||||||||  |||| ||||||||||||||||||||||| || ||||   ||   |||||||||||||||||||||    
T  41795346 cagaagatcctcggcagttaactaacgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 41795435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 44561320 - 44561433
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    |||| |||||||||||||||||| |||||||||||||||| |||||||||||| ||  ||| || ||  ||||||||||||  ||||  || ||||| ||    
T  44561320 cagacgatcctcggcagttaactaccgagattttcctcggtagttaactgcagccggttttttatttactcggcagttaacaaccgagagggcaaaatcg 44561419  T
Q  101 taaattactcgtgt 114  Q
    ||  ||||||||||    
T  44561420 tattttactcgtgt 44561433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 56304926 - 56304815
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatg 133  Q
    ||||||||| |||||||||| |  |||| |||||| ||| |||||||||||||| ||| |||||| |||  ||||||||||  | |  ||||||||||||    
T  56304926 tcctcggcaattaactgcagccagatttttaattcctcgacagttaactgccgatggg-caaaaatgtattttactcgtgtttctcaaccttatcaaatg 56304828  T
Q  134 tgggaacaacaat 146  Q
    |||||||||||||    
T  56304827 tgggaacaacaat 56304815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 6280926 - 6280795
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgt 114  Q
    ||||||||| ||||  |||||||| | | |||||||||| ||  |||  ||||||| | ||||||||||||||  || ||||||||||||||||||||||    
T  6280926 cagttaactaccgatgttttcctcagtatttaactgcagccggtttttaaattctttgacagttaactgccgagagggcaaaaacgtaaattactcgtgt 6280827  T
Q  115 gccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||| |  ||||||  ||||||  |||||||||    
T  6280826 gccccaaccttatgcaatgtgtcaacaacaat 6280795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 14200637 - 14200558
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||||| ||||||||||||||    
T  14200637 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactgccga 14200558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 21015815 - 21015736
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||| ||| |||| |||||||||||||  || ||||||||  ||||| ||||||||||||||    
T  21015815 tcctcggcagttaactaccgaggtttccctcagcagttaactgcacccgtatttctaaaacttcgacagttaactgccga 21015736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 23220754 - 23220671
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||| |||| ||| ||||  ||||| ||||||||||||||||| || ||||||||  |||||||||||||||||| |||||    
T  23220754 tcctcggtagtttactgccgaagttttcatcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccaaaggg 23220671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 46254445 - 46254524
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||||||||||||||| ||||    
T  46254445 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactaccga 46254524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 10 - 68
Target Start/End: Original strand, 37022060 - 37022118
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattc 68  Q
    |||||||||||||| ||||| |||||||||| |||||||||||| |||||||| |||||    
T  37022060 ctcggcagttaactgccgaggttttcctcggtagttaactgcagccgaatttcaaattc 37022118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 15 - 117
Target Start/End: Original strand, 49572904 - 49573006
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgt 114  Q
    ||||| ||| ||||| ||||||||||||||||||||||| ||| | |  ||||| ||| |||||||||| ||| ||| ||||||||||  ||||| ||||    
T  49572904 cagtttactaccgaggttttcctcggcagttaactgcagccgattattgaattcctcgacagttaactgtcgatggggcaaaaacgtattttacttgtgt 49573003  T
Q  115 gcc 117  Q
    |||    
T  49573004 gcc 49573006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 21017994 - 21018083
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaag 89  Q
    ||||||||| ||||||||||||| ||||| ||||||||||||||||| ||||| || |||| | ||   ||| |||||||||||||||||    
T  21017994 cagaagatcatcggcagttaactgccgaggttttcctcggcagttaattgcagccggatttttcaaaatttcagcagttaactgccgaag 21018083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 21470977 - 21470852
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||| |||||||| || |||||||||||||   |||  ||| | ||| ||||||||||||||   ||||||||||||  |||||    
T  21470977 ctcggcagttaactaccgaggttttcctctgcggttaactgcagtcagtttttgaatacctcgacagttaactgccgagaagacaaaaacgtattttact 21470878  T
Q  110 cgtgtgccacgtccttatcaaatgtg 135  Q
     ||||||| |  ||||||| ||||||    
T  21470877 tgtgtgcctcaaccttatccaatgtg 21470852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 33383878 - 33383833
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcg 56  Q
    ||||||||||||| ||||| ||||||||||||||||||||||||||    
T  33383878 tcggcagttaacttccgaggttttcctcggcagttaactgcagtcg 33383833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 50447084 - 50447003
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaag 89  Q
    ||||||| |||| ||| ||||  ||||||||| ||||||||||||| || |||| |||  ||||||||||||||||||||||    
T  50447084 tcctcggtagtttactgccgaagttttcctcgacagttaactgcagccgtatttttaaaacttcggcagttaactgccgaag 50447003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 89
Target Start/End: Complemental strand, 56565833 - 56565752
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaag 89  Q
    ||||||| |||||||||||||| ||||||||||||||||||||| | ||  || ||||  ||||| ||||||||||| ||||    
T  56565833 tcctcggtagttaactcccgaggttttcctcggcagttaactgccgccggtttactaaaacttcgacagttaactgctgaag 56565752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 30 - 90
Target Start/End: Original strand, 1044538 - 1044598
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagg 90  Q
    |||||||||||||||||||||||| |  ||||| ||||| ||| |||||||||||||||||    
T  1044538 attttcctcggcagttaactgcagccagatttcaaattcatcgacagttaactgccgaagg 1044598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 26792241 - 26792325
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaaggg 91  Q
    |||| ||||||||||| ||||||||||||||||||||||||||| | ||  || || ||  ||||||||||||| ||||||||||    
T  26792241 tccttggcagttaactaccgagattttcctcggcagttaactgccgccggtttactaaaaacttcggcagttaattgccgaaggg 26792325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 98
Target Start/End: Original strand, 34154425 - 34154489
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaa 98  Q
    ||||| |||||||||||||| ||  ||| |||||| |||||||||||||||||| ||||||||||    
T  34154425 tcctctgcagttaactgcagccggttttttaattcctcggcagttaactgccgatgggacaaaaa 34154489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 34530792 - 34530903
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatg 133  Q
    |||||||||||||||||||| |  ||||||||  ||||| ||||||||||||||| |||||   | |||||||| ||||||| | |  ||||||  ||||    
T  34530792 tcctcggcagttaactgcagccagatttctaaaacttcgacagttaactgccgaa-ggacatttaggtaaattattcgtgtggcccagccttatgcaatg 34530890  T
Q  134 tgggaacaacaat 146  Q
    |||||||||||||    
T  34530891 tgggaacaacaat 34530903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 37015945 - 37015869
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||||||| ||| |||||| || | |||||| |||| ||| |||||||  |||||||||||||||||    
T  37015945 tcggcagttaactgccgagggggcaaaaatgtcatttactcatgtggcacatccttatgtaatgtgggaacaacaat 37015869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 48256567 - 48256635
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagtt 78  Q
    |||||||||||||| | ||  ||||||||||||||||||||||| || |||| ||||||||| ||||||    
T  48256567 ctcggcagttaactactgaagttttcctcggcagttaactgcagccggatttttaattcttctgcagtt 48256635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 51037488 - 51037544
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||| ||||| || ||||||||  ||||||||||||||||||||    
T  51037488 ttttcctcggcagttaattgcagccgtatttctaaaacttcggcagttaactgccga 51037544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 28235558 - 28235641
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||| |||||||| | ||  ||||||||||||||||||||| | ||  || ||||  ||||||||||||||||||||||||    
T  28235558 tcctcgggagttaactgcagaagttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaaggg 28235641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 30726738 - 30726781
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  30726738 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 30726781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 31425315 - 31425358
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  31425315 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 31425358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 37563277 - 37563320
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  37563277 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 37563320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 37959720 - 37959855
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||  |||||||||||||||||||||||  |  | |  ||||| ||  |||||||||||||| |||  |||||||||  ||||||    
T  37959720 tcggcagttaactaccgatgttttcctcggcagttaactgcagctggttattaaattcctcaacagttaactgccgagggggtaaaaacgtattttactc 37959819  T
Q  111 gtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||| |  ||||||  ||||||  |||||||||    
T  37959820 gtgtgcctcagccttatgtaatgtgtcaacaacaat 37959855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 39773480 - 39773437
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  39773480 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 39773437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 40358277 - 40358320
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  40358277 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 40358320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 44049160 - 44049113
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgcc 117  Q
    |||||||||||||||||| |||  ||||||||||||||||||||||||    
T  44049160 tcggcagttaactgccgagggggtaaaaacgtaaattactcgtgtgcc 44049113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 54634012 - 54634055
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  54634012 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 54634055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 19073655 - 19073712
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattc 68  Q
    ||||||||||||| |||||  |||||||||||||||||||||| || ||||| |||||    
T  19073655 tcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattc 19073712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 26932660 - 26932619
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaact 49  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  26932660 tcctcggcagttaactaccgaggttttcctcggcagttaact 26932619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 37395211 - 37395316
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaa-cgtaaattactcgtgtgccacgtccttatca 129  Q
    |||||||||||| |||||||||| || ||||| ||||| ||| ||||||| ||| || ||| |||||| ||||  ||||| ||||| |||  ||||||||    
T  37395211 ttttcctcggcaattaactgcagccggatttcaaattcctcgacagttaagtgctgagggggcaaaaatcgtattttactagtgtggcacaaccttatca 37395310  T
Q  130 aatgtg 135  Q
    ||||||    
T  37395311 aatgtg 37395316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 48806561 - 48806516
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| | || ||||||||||||||||||||||||    
T  48806561 tcctcggcagttaactgctgaaattttcctcggcagttaactgcag 48806516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 1089581 - 1089624
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  1089581 tcctcggcagttaactaccgaggttttcctcggcatttaactgc 1089624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 7485658 - 7485737
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  | ||||||||||||||| ||||| || ||||||||  ||||| ||||||||||||||    
T  7485658 tcctcggtagtttactgccgaagtcttcctcggcagttaattgcagccgtatttctaaaacttcgacagttaactgccga 7485737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 18884501 - 18884580
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||  |||| |||||||||||||||||| ||  |||  ||   |||||||||||||||||||    
T  18884501 tcctcggcagttaactgccgaagtttttctcggcagttaactgcagccggtttttcaaaatttcggcagttaactgccga 18884580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 14 - 53
Target Start/End: Complemental strand, 20208580 - 20208541
Alignment:
Q  14 gcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||| ||||| |||||||||||||||||||||||    
T  20208580 gcagttaactaccgaggttttcctcggcagttaactgcag 20208541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 21018110 - 21018067
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||    
T  21018110 tcctcggcagttaactaccgaggttttcttcggcagttaactgc 21018067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 82
Target Start/End: Complemental strand, 34151687 - 34151616
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaact 82  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||| ||| |||  ||||  |||||| ||||||    
T  34151687 tcggcagtttactaccgaggttttcctcggcagttaactgcagccgatttttgaattactcggcatttaact 34151616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 41793440 - 41793397
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  41793440 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 41793397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 49169094 - 49169137
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| | |||||||||||||||||||    
T  49169094 tcctcggcagttaactaccgaggtattcctcggcagttaactgc 49169137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 9 - 51
Target Start/End: Original strand, 11084005 - 11084047
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||    
T  11084005 cctcggcagttaactgccgaggttttcctcgggagttaactgc 11084047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 17342216 - 17342142
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    |||||||||||||| ||||  |||| ||||| |||||||||||| ||| ||   ||||| |||||||||||||||    
T  17342216 ctcggcagttaactaccgaagtttttctcggtagttaactgcagccgatttatgaattcctcggcagttaactgc 17342142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 33409596 - 33409554
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||    
T  33409596 tcggcagttaactgccgaggttttcctcgggagttaactgcag 33409554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 33410229 - 33410271
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||    
T  33410229 tcggcagttaactgccgaggttttcctcgggagttaactgcag 33410271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 50
Target Start/End: Complemental strand, 67667 - 67626
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactg 50  Q
    ||||||||||||||| ||||| ||||||||| ||||||||||    
T  67667 cctcggcagttaactaccgaggttttcctcgacagttaactg 67626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 97
Target Start/End: Complemental strand, 4768726 - 4768665
Alignment:
Q  36 ctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaa 97  Q
    |||||||||||||||||| |  ||||  ||||| |||||||||||||||||| ||| |||||    
T  4768726 ctcggcagttaactgcagccagattttgaattcctcggcagttaactgccgagggggcaaaa 4768665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 52
Target Start/End: Complemental strand, 4783719 - 4783678
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgca 52  Q
    ||||||||||||| ||||  ||||||||||||||||||||||    
T  4783719 tcggcagttaactgccgaagttttcctcggcagttaactgca 4783678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 9473658 - 9473703
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||| ||||||||||| |||| ||||||||||| ||||||||||||    
T  9473658 tccttggcagttaactaccgaaattttcctcggtagttaactgcag 9473703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 87
Target Start/End: Original strand, 28084013 - 28084066
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||||  | ||||||||  |||||||||||| |||||||    
T  28084013 tcctcggcagttaactgcagctggatttctaaaacttcggcagttatctgccga 28084066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 28234490 - 28234449
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||| ||||| |||||||||||| ||||||||    
T  28234490 ctcggcagttaactaccgaggttttcctcggcatttaactgc 28234449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 38460502 - 38460457
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||| | ||||| ||||||||| |||||||||||||    
T  38460502 tcctcggcagttaattaccgaggttttcctcgacagttaactgcag 38460457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 40354679 - 40354638
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||| ||||| ||||| |||||||||||||||    
T  40354679 ctcggcagttaactaccgaggttttcttcggcagttaactgc 40354638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 43176625 - 43176670
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||| |||||||| ||||  |||||||||||||||||||||||    
T  43176625 tcctcggtagttaactgccgaagttttcctcggcagttaactgcag 43176670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Complemental strand, 49563914 - 49563873
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||| ||||||| ||||| |||||||||||||||||||||    
T  49563914 ctcggccgttaactaccgaggttttcctcggcagttaactgc 49563873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4786324 - 4786376
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||| ||||||||||||  ||||| |||||||| | ||||||||||||    
T  4786324 cagaagatcatcggcagttaacaaccgaggttttcctcagtagttaactgcag 4786376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 9655906 - 9655954
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcg 56  Q
    |||||||||||| ||| ||||  |||||||||| |||||||||||||||    
T  9655906 tcctcggcagtttactgccgaagttttcctcggtagttaactgcagtcg 9655954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 16473700 - 16473760
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||| |||||||||| | ||  || ||||  ||||||||||||||||||||||||    
T  16473700 ttttcctcggtagttaactgccgccggtttactaaaacttcggcagttaactgccgaaggg 16473760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 16 - 91
Target Start/End: Complemental strand, 52529281 - 52529205
Alignment:
Q  16 agttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaaggg 91  Q
    |||||||| ||||| ||||||||||||||||||||| | ||| || || ||  ||||||||||| ||| ||||||||    
T  52529281 agttaactaccgaggttttcctcggcagttaactgccgccgatttcctaaaaacttcggcagtttactaccgaaggg 52529205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 90; Significance: 3e-43; HSPs: 131)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 55385220 - 55385075
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||| ||||||||| ||||| ||||||||||||||||||||||| || ||||||||  |||||||||||||||||||| ||| ||||||||    
T  55385220 cagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgagggggcaaaaacg 55385121  T
Q  101 taaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    | |||||||||||||||||  ||||||  |||||||||||||||||    
T  55385120 tcaattactcgtgtgccacaaccttatgcaatgtgggaacaacaat 55385075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 118
Target Start/End: Original strand, 19341591 - 19341701
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||| || ||||||||||| |||||||||||||||||| ||||||||||||||| |||    
T  19341591 tcctcggcagttaactgccgaagttttcctcggtagttaactgcagccggatttctaattcctcggcagttaactgccgaggggacaaaaacgtaactta 19341690  T
Q  108 ctcgtgtgcca 118  Q
    |||||||||||    
T  19341691 ctcgtgtgcca 19341701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 34694424 - 34694569
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||||||||| |||| |||||||||| ||||||| || ||||||||||| ||| |||||||||||||| ||| ||   | |    
T  34694424 cagaagatcctcggcagttaactcccgaggtttttctcggcagtttactgcagccggatttctaattcctcgacagttaactgccgagggggcatttagg 34694523  T
Q  101 taaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||||  |   |||||||||||||||||||||||||    
T  34694524 taaattactcgtgtgttataaccttatcaaatgtgggaacaacaat 34694569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 43478827 - 43478965
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||| || ||||||||  |||| ||||||||||||||| ||||||||||| | | |||    
T  43478827 tcctcggcagttaactaccgaagttttcctcggcagttaactgcagccggatttctaaaacttcagcagttaactgccgaggggacaaaaacatcattta 43478926  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  ||||||  |||||||||||||||||    
T  43478927 ctcgtgtggcacaaccttatgtaatgtgggaacaacaat 43478965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 50216879 - 50216989
Alignment:
Q  36 ctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtg 135  Q
    |||||||||||||||||| || |||| |||||| |||||||||||||||| | ||| ||||||||| |||||||||||||||||  ||||||||||||||    
T  50216879 ctcggcagttaactgcagccggatttttaattcctcggcagttaactgccaatggggcaaaaacgtcaattactcgtgtgccacaaccttatcaaatgtg 50216978  T
Q  136 ggaacaacaat 146  Q
    |||||||||||    
T  50216979 ggaacaacaat 50216989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 4 - 146
Target Start/End: Complemental strand, 43476272 - 43476129
Alignment:
Q  4 aagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtc-gaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| | || |||||||  ||||||||||||||| |||| ||| |||||||||     
T  43476272 aagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattttctaaaacttcggcagttaacttccgagggggcaaaaacgtc 43476173  T
Q  103 aattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    | ||||||||||| |||  ||||||  |||||| ||||||||||    
T  43476172 atttactcgtgtggcacaaccttatgtaatgtgagaacaacaat 43476129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 2743474 - 2743390
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggga 92  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||| ||||    
T  2743474 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggga 2743390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 36134406 - 36134318
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||  |||||| |||||||| ||||||    
T  36134406 cagaagatcctcggcagttaactcccgaggttttcctcggcagttaactgcagacggatttctaaaacttcggtagttaacttccgaag 36134318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 4 - 112
Target Start/End: Complemental strand, 41803078 - 41802970
Alignment:
Q  4 aagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaa 103  Q
    |||||||||||||||||||| ||||| ||||||||||||||||||||||| ||  |||  ||||||||||||||||||||||||  || ||||||||||     
T  41803078 aagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttttaaattcttcggcagttaactgccgagtgggcaaaaacgtat 41802979  T
Q  104 attactcgt 112  Q
     ||||||||    
T  41802978 tttactcgt 41802970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 10 - 146
Target Start/End: Original strand, 48250868 - 48251004
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||||||||| ||||||||||||||||||||||| || | ||| ||||| || ||||||||||||||| ||| ||||||||| | ||| |    
T  48250868 ctcggcagttaactcccgaggttttcctcggcagttaactgcagccggaattcaaattcctcagcagttaactgccgagggggcaaaaacgtcatttatt 48250967  T
Q  110 cgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
      |||| |||  ||||||  |||||||||||||||||    
T  48250968 tatgtggcacaaccttatgtaatgtgggaacaacaat 48251004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 2 - 117
Target Start/End: Original strand, 52570557 - 52570671
Alignment:
Q  2 agaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgt 101  Q
    |||||||||||||||||||||| ||||| |||| ||||| |||||||||||||||  |||  |||||||||||||||||||||||| |||| ||||||||    
T  52570557 agaagatcctcggcagttaactaccgaggtttttctcggtagttaactgcagtcggtttttgaattcttcggcagttaactgccgagggga-aaaaacgt 52570655  T
Q  102 aaattactcgtgtgcc 117  Q
    |  ||| |||||||||    
T  52570656 attttaatcgtgtgcc 52570671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 16647168 - 16647282
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    |||||||||||||||||||||| || ||||||||  | |||||||||||||||||| ||| ||||||||| || |||||||||||||   ||||||  ||    
T  16647168 tttcctcggcagttaactgcagccggatttctaaaacatcggcagttaactgccgagggggcaaaaacgtcaagtactcgtgtgccagaaccttatgcaa 16647267  T
Q  132 tgtgggaacaacaat 146  Q
    |||||||||||||||    
T  16647268 tgtgggaacaacaat 16647282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 2271303 - 2271391
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaag 89  Q
    |||||||||||||||||||||||||||||  || ||||||||||||||||||| || ||||||||  ||||| ||||||||||||||||    
T  2271303 cagaagatcctcggcagttaactcccgaggattccctcggcagttaactgcagccggatttctaaaacttcgacagttaactgccgaag 2271391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 4002502 - 4002608
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| || | |||||||||||| |||| |||||  ||||| ||    
T  4002502 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagtagttaactgccg-aggggcaaaagagtaaaata 4002600  T
Q  108 ctcgtgtg 115  Q
    ||||||||    
T  4002601 ctcgtgtg 4002608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 41137771 - 41137656
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    ||||||||||||||||||||||| || ||||| ||||| ||||||||||||||| || ||  ||||||| ||  ||||| ||||| |||  |||||||||    
T  41137771 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgctgatggagcaaaaacatattttactagtgtggcacaaccttatcaa 41137672  T
Q  131 atgtgggaacaacaat 146  Q
    ||||||||||||||||    
T  41137671 atgtgggaacaacaat 41137656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 600541 - 600679
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||| | || ||||| ||  |||||||||||||||| ||| ||  ||||||||| | |||    
T  600541 tcctcggcagttaactaccgaggttttcctcgacagttaactgcggccggatttccaaaacttcggcagttaactgtcgagggcgcaaaaacgtcattta 600640  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||| |  |||| |  |||||||||||||||||    
T  600641 ctcgtgtgccgcagccttctacaatgtgggaacaacaat 600679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 49219781 - 49219914
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    |||||||||||||  |||||||| || || ||||||||||||||||||||||| || ||||||||||| ||||||||||||| |||| | | |||||  |    
T  49219781 cagaagatcctcgatagttaactaccaaggttttcctcggcagttaactgcagccggatttctaattcctcggcagttaactaccgaggaggcaaaattg 49219880  T
Q  101 taaattactcgtgtgccacgtccttatcaaatgt 134  Q
    ||  ||||| ||||| |||  |||||||||||||    
T  49219881 tattttactagtgtggcacagccttatcaaatgt 49219914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 4004793 - 4004881
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||||| | ||||| ||||||||||||||||||||||| || ||||||||  |||||||| |||||| ||||||    
T  4004793 cagaagatcctcggcagttaagtaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcaattaactaccgaag 4004881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 10 - 146
Target Start/End: Complemental strand, 47070542 - 47070406
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| | ||  |||||||||| |||||||| ||| |||||||||||   || ||||||||| ||||||  || ||||||||| |||||||    
T  47070542 ctcggcagttaactacggatgttttcctcggaagttaactacagccgaatttctaaaaatttggcagttaattgccgatagggcaaaaacgtcaattact 47070443  T
Q  110 cgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||||||   |||||  |||||||||||||||||    
T  47070442 cgtgtgccacagtcttatgcaatgtgggaacaacaat 47070406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 135
Target Start/End: Complemental strand, 48246488 - 48246361
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||| || ||||||||  |||| ||||||||||||||| ||| ||||||  | | |||    
T  48246488 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttctaaaacttcagcagttaactgccgagggggcaaaaatatcattta 48246389  T
Q  108 ctcgtgtgccacgtccttatcaaatgtg 135  Q
    ||||| || | |  ||||||||||||||    
T  48246388 ctcgtatgactcagccttatcaaatgtg 48246361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 7843014 - 7843152
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||||| ||||||| ||||| | ||||||| ||||||||||||||||| | ||| ||||  |||||||||||||||||| |||| ||||  |||  |||    
T  7843014 tcctcggaagttaacgcccgataatttcctctgcagttaactgcagtcggaattcaaatttctcggcagttaactgccgaggggataaaattgtatttta 7843113  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||  |||| |||  |||||||||||| ||||||||||||    
T  7843114 ctaatgtggcacagccttatcaaatgagggaacaacaat 7843152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 12 - 114
Target Start/End: Complemental strand, 11380513 - 11380411
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcg 111  Q
    ||||||| |||| ||||| || |||||||||||||||||||  |  |||| |||||| |||||||||||||||||||||| ||||||||||  |||||||    
T  11380513 cggcagtaaactaccgaggttatcctcggcagttaactgcaaccatatttttaattcctcggcagttaactgccgaaggggcaaaaacgtattttactcg 11380414  T
Q  112 tgt 114  Q
    |||    
T  11380413 tgt 11380411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 23443131 - 23443241
Alignment:
Q  36 ctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtg 135  Q
    |||||||||||||||||| || | ||| ||||| |||||||||||||||||| |||  |||| ||||  ||||| ||||| |||  ||||||||||||||    
T  23443131 ctcggcagttaactgcagccggaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtgtcacagccttatcaaatgtg 23443230  T
Q  136 ggaacaacaat 146  Q
    |||||||||||    
T  23443231 ggaacaacaat 23443241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 24703405 - 24703491
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||| ||||||||||||||| |||  |||||||||||||||||||||  |||||||||||  |||||| |||||||||||||    
T  24703405 cagaagatcatcggcagttaactcctgaggatttcctcggcagttaactgcatccgaatttctaaaacttcggtagttaactgccga 24703491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 14043897 - 14043978
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||| ||||  ||||||||||||||||||||||| ||| |||||||  ||||| ||||||||||||||||||    
T  14043897 ctcggcagttaactgccgaagttttcctcggcagttaactgcagccgattttctaaaacttcgacagttaactgccgaaggg 14043978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 42756233 - 42756141
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    ||||||||||||||| |||| ||||||||||||||||||||||  || |||| |||||| ||| ||||||||||| || ||| ||||||||||    
T  42756233 ctcggcagttaactctcgaggttttcctcggcagttaactgcaaccggatttttaattcctcgacagttaactgctgagggggcaaaaacgta 42756141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 14 - 146
Target Start/End: Complemental strand, 46989617 - 46989485
Alignment:
Q  14 gcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtg 113  Q
    |||||||||| ||||| ||||||||||||||||||||||| || | ||| ||||  |||| |||||||||||||  || ||||||||| | ||||||||     
T  46989617 gcagttaactaccgaggttttcctcggcagttaactgcagccggaattcaaatttctcggtagttaactgccgagagggcaaaaacgtcatttactcgta 46989518  T
Q  114 tgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || |||  |||||| |||||||  |||||||||    
T  46989517 tgacacaaccttattaaatgtgtaaacaacaat 46989485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 51696574 - 51696650
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||||||||| |||| ||| |||||| ||||||||||||||||||||  ||||||||||||||| |||||||||    
T  51696574 tcggcagttaactaccgagggggcaaaaaagtaaattactcgtgtgccacagccttatcaaatgtggcaacaacaat 51696650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 9429846 - 9429925
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||| |||||||||| | |||||||||| | |||||| ||||| ||||||||||||||||||    
T  9429846 tcctcggcagttaactaccgaggttttcctcggtacttaactgcagccaaatttcaaattcctcggcagttaactgccga 9429925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 27739564 - 27739647
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||    
T  27739564 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaaggg 27739647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 34691701 - 34691622
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||| || |||| || ||| ||||||||||||||||||    
T  34691701 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttatttcctcggcagttaactgccga 34691622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 16484453 - 16484591
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| || ||| ||||   |||| ||| ||||||||||  || |||||| || | |||    
T  16484453 tcctcggcagttaactcccgaagttttcctcggcagttaactgcagccggattactaaaatttcgacaggtaactgccgagagggcaaaaatgtcattta 16484552  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  || |||  |||||||| ||||||||    
T  16484553 ctcgtgtggcacaaccctatgtaatgtgggtacaacaat 16484591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 48888811 - 48888738
Alignment:
Q  13 ggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||| ||||||||||||||||||||||||||||| || |||| |||||| ||||||| ||||||||||    
T  48888811 ggcagttaactaccgagattttcctcggcagttaactgcagccggatttttaattcctcggcag-taactgccga 48888738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 115
Target Start/End: Complemental strand, 55267488 - 55267410
Alignment:
Q  37 tcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    |||||| |||||||||| ||| |||  |||||||||||||||||||| ||| ||| |||||||||||||||||||||||    
T  55267488 tcggcaattaactgcagccgatttttgaattcttcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtg 55267410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 2647693 - 2647778
Alignment:
Q  5 agatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||| || |||| | ||   |||||||||||||||||||||    
T  2647693 agatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 2647778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 55207653 - 55207766
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| || || || |||| ||||||||||||||  ||  |||  |||||||||||||||||||||||| ||| |||||  |    
T  55207653 cagaagatcctcggcagttaactaccaaggttgtcctaggcagttaactgcaaccggtttttgaattcttcggcagttaactgccgatggggcaaaagag 55207752  T
Q  101 taaattactcgtgt 114  Q
    ||  ||||||||||    
T  55207753 tattttactcgtgt 55207766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 117
Target Start/End: Complemental strand, 6489405 - 6489300
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||||  |||||||||||||||||||||| ||  ||  |||||| |||||    ||||||||| ||| |||||||||||||||    
T  6489405 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggtttcttaattcctcggc----aactgccgagggggcaaaaacgtaaatta 6489310  T
Q  108 ctcgtgtgcc 117  Q
    || |||||||    
T  6489309 cttgtgtgcc 6489300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 6505973 - 6506057
Alignment:
Q  33 ttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgcc 117  Q
    ||||||||||||||||||||| ||  ||  |||||| | ||||||||||| | || |||||||||||||||||||||||||||||    
T  6505973 ttcctcggcagttaactgcagccggtttcttaattccttggcagttaacttctgaggggacaaaaacgtaaattactcgtgtgcc 6506057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 19440329 - 19440253
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| ||  ||   ||||||||||||||||||||||||    
T  19440329 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggtttatgaattcttcggcagttaactgccga 19440253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 29918340 - 29918432
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    ||||||||||||||  |||| ||||||||||||||||||||||| ||  |||| |||| |||||||||||| |||||| ||| ||||| ||||    
T  29918340 ctcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgta 29918432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 102
Target Start/End: Original strand, 29967493 - 29967585
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    ||||||||||||||  |||| ||||||||||||||||||||||| ||  |||| |||| |||||||||||| |||||| ||| ||||| ||||    
T  29967493 ctcggcagttaactaacgaggttttcctcggcagttaactgcagccggttttcgaattattcggcagttaattgccgaggggccaaaatcgta 29967585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 127
Target Start/End: Complemental strand, 36812913 - 36812793
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtc-gaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatt 106  Q
    |||||||||||| ||| ||||| |||||||||| |||||||||||| | || |||| ||||| |||| || |||||||||| ||| |||||  ||||| |    
T  36812913 tcctcggcagtttactaccgaggttttcctcggtagttaactgcagccggattttcaaattcctcggtagctaactgccgagggggcaaaagagtaaaat 36812814  T
Q  107 actcgtgtgccacgtccttat 127  Q
    ||||||||| ||| |||||||    
T  36812813 actcgtgtggcacatccttat 36812793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 32 - 115
Target Start/End: Complemental strand, 596836 - 596753
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    |||||||||||||||||||||| |||||||  ||  ||||||||||||| |||||| | |||||||| |||||||||| |||||    
T  596836 tttcctcggcagttaactgcagccgaatttacaaaacttcggcagttaattgccgaggagacaaaaaggtaaattacttgtgtg 596753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 4015126 - 4015209
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||||| ||||| ||||||||||||||||||| | | ||  || ||||  ||||||||||||||||||||||||    
T  4015126 tcctcggcagttaacttccgaggttttcctcggcagttaactcccgccggtttactaaaacttcggcagttaactgccgaaggg 4015209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 7247864 - 7247995
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgt 114  Q
    ||||||||| ||||| ||||||||| ||||||||||||| ||  | |  ||||| |||||||||||||||||| ||| ||||| ||||  ||| ||||||    
T  7247864 cagttaactaccgaggttttcctcgtcagttaactgcagccggttattgaattcctcggcagttaactgccgagggggcaaaagcgtattttattcgtgt 7247963  T
Q  115 gccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||| |  ||||||| ||||||  |||||||||    
T  7247964 gcctcagccttatccaatgtgtcaacaacaat 7247995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 13747716 - 13747794
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| | ||| |||||||| |||||||||||||| || ||||| ||||| ||||||||||||||||||    
T  13747716 tcctcggcagttaactac-gaggttttcctcagcagttaactgcagccggatttcaaattcatcggcagttaactgccga 13747794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 14398611 - 14398504
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||| ||||||||| |||||  || ||||||||||||||||||| || | ||| ||||| |||||||||||| ||||| | || |||| |||||| ||    
T  14398611 tcctcgacagttaacttccgaggattccctcggcagttaactgcagccggaattcaaattcctcggcagttaaccgccgaggagataaaatcgtaaaata 14398512  T
Q  108 ctcgtgtg 115  Q
    ||||||||    
T  14398511 ctcgtgtg 14398504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 20918009 - 20918080
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaa 80  Q
    ||||||||||||||| ||||| |||||||||||||||||||| || || |||| |||||| |||||||||||    
T  20918009 cctcggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattcatcggcagttaa 20918080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 9 - 80
Target Start/End: Original strand, 20926971 - 20927042
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaa 80  Q
    ||||||||||||||| ||||| |||||||||||||||||||| || || |||| |||||| |||||||||||    
T  20926971 cctcggcagttaactaccgaggttttcctcggcagttaactgtagccggatttttaattcatcggcagttaa 20927042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 24700797 - 24700718
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| |||||  ||||||||| |||||||||||  || ||||||||||| ||| ||||||||||||||    
T  24700797 tcctcggcagttaactaccgaggatttcctcgggagttaactgcaaccggatttctaattcctcgacagttaactgccga 24700718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 34543133 - 34543212
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||    
T  34543133 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 34543212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 18 - 117
Target Start/End: Original strand, 41805682 - 41805781
Alignment:
Q  18 ttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgcc 117  Q
    |||||||||||| ||||||||||||||||| ||||| ||   ||  ||||||||| |||||||||||||| |   ||||||||||||||||| |||||||    
T  41805682 ttaactcccgaggttttcctcggcagttaattgcagccggtctttaaattcttcgacagttaactgccgaggaagcaaaaacgtaaattacttgtgtgcc 41805781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 90
Target Start/End: Complemental strand, 8475902 - 8475820
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagg 90  Q
    ||||| |||||||||| ||||| ||||||||||||||||||||| | ||  || ||||  |||||||||||||||||||||||    
T  8475902 tcctcagcagttaactaccgaggttttcctcggcagttaactgccgccggtttactaaaacttcggcagttaactgccgaagg 8475820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34049163 - 34049074
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt---ctaattcttcggcagttaactgccgaag 89  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||||| || ||||   | |||  |||||||||||||||||||||    
T  34049163 cagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagcaaat--ttcggcagttaactgccgaag 34049074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 36817518 - 36817656
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||||  ||||||||  |||||||||||| || | ||| ||||| |||| |||||||||| || |||  ||||  |||  |||    
T  36817518 tcctcggcagttaactaccgaggatttcctcgatagttaactgcagccggagttcaaattcctcggtagttaactgctgagggggtaaaatagtatttta 36817617  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||| |||  |||||||| ||||||||||||||||    
T  36817618 ctagtgtggcacaaccttatcacatgtgggaacaacaat 36817656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 42165239 - 42165102
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| |||||||||||| |||||||| | ||  || ||||  |||| |||| |||||||||||||| ||    |||||| ||    
T  42165239 tcctcggcagttaactaccgaggttttcctcggcaattaactgccgccggtttactaaaacttcagcagctaactgccgaaggg-cattttcgtaaaata 42165141  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  ||||||||||||||  |||||||||    
T  42165140 ctcgtgtggcacagccttatcaaatgtgtaaacaacaat 42165102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 2062460 - 2062379
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||| ||||  ||||||||| ||||||||||||| |   |||||||  ||||||||||||||||||||||||    
T  2062460 ctcggcagttaactgccgaagttttcctcgacagttaactgcagccagttttctaaaacttcggcagttaactgccgaaggg 2062379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 51402388 - 51402501
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| ||||| ||||||||| ||||||||| || |||| |||  |||| ||| ||| |||||||| || |   ||||||||    
T  51402388 cagaagatcctcggcagttaactaccgaggttttcctcgacagttaactacaatcgatttttgaattattctgcaattaactgctgaggaagcaaaaacg 51402487  T
Q  101 taaattactcgtgt 114  Q
    ||  ||||||||||    
T  51402488 tattttactcgtgt 51402501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 54389878 - 54389789
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt-ctaattcttcggcagttaactgccgaag 89  Q
    |||||| |||||||||||||||| ||||| ||||||||||||||||||||||| || ||||   ||   |||||||||||||||||||||    
T  54389878 cagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 54389789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 12897900 - 12897824
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  |||||||||||||||||    
T  12897900 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgc 12897824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 13743346 - 13743290
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||    
T  13743346 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 13743290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 14402990 - 14403074
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    ||||||||||||||||||| | | || ||||| ||||| |||||||||||||||||| ||| |||||  ||||| ||||||||||    
T  14402990 ttttcctcggcagttaactaccgccggatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaatactcgtgtg 14403074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 46345003 - 46344923
Alignment:
Q  18 ttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaa 98  Q
    |||||| ||||| ||||||||||||||||||||||| ||| |||  ||||| ||| |||||||||||||| ||| ||||||    
T  46345003 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgagggggcaaaaa 46344923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 1293453 - 1293410
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  1293453 tcctcggcagttaactcccgaggttttcctcggcagttaactgc 1293410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 3953212 - 3953255
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  3953212 tcctcggcagttaactcccgaggttttcctcggcagttaactgc 3953255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 7839498 - 7839602
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||||  |  |||||| |||||||||||| ||  |||  ||||| ||| ||||| |||||||| ||| |||||||||||||||    
T  7839498 tcctcggcagttaactaccgaggat--cctcggtagttaactgcagccggtttttgaattcctcgacagtttactgccgagggggcaaaaacgtaaatta 7839595  T
Q  108 ctcgtgt 114  Q
    |||||||    
T  7839596 ctcgtgt 7839602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 142
Target Start/End: Complemental strand, 7841174 - 7841063
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    ||||||||||||||||| ||||| |  ||||| ||||| |||| |||||| |||||| ||| |||||  |||  ||||| ||||| |||  |||||||||    
T  7841174 ttttcctcggcagttaaatgcagccagatttcaaattcctcggtagttaattgccgagggggcaaaattgtattttactagtgtgacacagccttatcaa 7841075  T
Q  131 atgtgggaacaa 142  Q
    ||||||||||||    
T  7841074 atgtgggaacaa 7841063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 11249521 - 11249604
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| |  ||||||||  |||| |||||||||||||||||||    
T  11249521 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccatatttctaaaacttcagcagttaactgccgaaggg 11249604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 28816998 - 28817077
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||| ||||||||||||||||    
T  28816998 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaactttggcagttaactgccga 28817077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 67
Target Start/End: Complemental strand, 49217171 - 49217112
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaatt 67  Q
    ||||||||| |||||| |||||||||| || |||||||||||||||||| ||||||||||    
T  49217171 tcctcggcaattaactaccgagatttttcttggcagttaactgcagtcggatttctaatt 49217112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 11 - 97
Target Start/End: Original strand, 49268845 - 49268931
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaa 97  Q
    ||||||||||||| ||||  ||||||||||||||||||||||  || |||| |||||| ||  |||||||| || ||||||||||||    
T  49268845 tcggcagttaactaccgatgttttcctcggcagttaactgcaaccggatttttaattcctccacagttaacggctgaagggacaaaa 49268931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 143
Target Start/End: Original strand, 2745229 - 2745337
Alignment:
Q  35 cctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgt 134  Q
    ||||| ||||||||||||| |||||||| ||||| || |||||||||| |||| |||  |||| ||||  ||| | ||||| |||  |||||||| ||||    
T  2745229 cctcgacagttaactgcagccgaatttcaaattcctcagcagttaactaccgagggggtaaaatcgtattttattggtgtgacacaaccttatcacatgt 2745328  T
Q  135 gggaacaac 143  Q
    |||||||||    
T  2745329 gggaacaac 2745337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 14 - 82
Target Start/End: Original strand, 30256006 - 30256074
Alignment:
Q  14 gcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaact 82  Q
    ||||||||||  |||| ||||||||||||||||||||||| ||  ||| |||||| |||||||||||||    
T  30256006 gcagttaactatcgaggttttcctcggcagttaactgcagccggttttttaattcctcggcagttaact 30256074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 42166407 - 42166487
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaa 88  Q
    |||||||||||||||| ||||  ||||||||||||||| ||||| | ||  || ||||  |||||||||||||||||||||    
T  42166407 tcctcggcagttaactaccgaagttttcctcggcagtttactgccgccggtttactaaaacttcggcagttaactgccgaa 42166487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 44227187 - 44227135
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt 61  Q
    ||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||    
T  44227187 cctcggcagttaactaccgaggttttcctcggcagttaactccagccgaattt 44227135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 49140837 - 49140889
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||| |||||||||||||||| | ||| |||||||||||||||||||||||    
T  49140837 cagaagttcctcggcagttaactactgaggttttcctcggcagttaactgcag 49140889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 4008320 - 4008403
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||||||||||| |||| |||| ||||||||||| | ||  || ||||   |||||||||| ||||||||||||    
T  4008320 tcctcggcagttaactcccgaggtttttctcgacagttaactgccgccggtttactaaaatttcggcagtttactgccgaaggg 4008403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 7941186 - 7941103
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||||| ||||  |||||||| |||||||||||||| ||  | | |||   |||||||||||||||||||||||    
T  7941186 tcctcggcagttaactgccgaagttttcctcagcagttaactgcagccggttctttaaaatttcggcagttaactgccgaaggg 7941103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 8156584 - 8156541
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  8156584 tcctcggcagttaactgccgaggttttcctcggcagttaactgc 8156541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 97
Target Start/End: Original strand, 28611099 - 28611186
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaa 97  Q
    |||||||||||||| |||   ||||||||||||||||||||||| ||  |||  ||||  |||||||||||||||||| ||| |||||    
T  28611099 ctcggcagttaactaccgttgttttcctcggcagttaactgcagccggtttttgaatttctcggcagttaactgccgagggggcaaaa 28611186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 30943265 - 30943222
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  30943265 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 30943222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 35743579 - 35743622
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  35743579 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 35743622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 41844361 - 41844404
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  41844361 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 41844404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 46697787 - 46697744
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  46697787 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 46697744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 50477256 - 50477213
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  50477256 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 50477213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 50998677 - 50998756
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||| |||||| || ||| | ||||| ||||||||||||||||| || |||| |||  ||||||||||||||||||||    
T  50998677 tcctcgacagttagctaccgcggttttcttcggcagttaactgcagccggatttataaaacttcggcagttaactgccga 50998756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 52567837 - 52567730
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| || |  |||| |||||||||||| ||||| ||| |||  |||| |||||||||||||||||||   | ||||| ||||  |||||    
T  52567837 ctcggcagttaactacctaagtttttctcggcagttaagtgcagccgatttttgaattattcggcagttaactgccgagaaggcaaaatcgtattttact 52567738  T
Q  110 cgtgtgcc 117  Q
    ||||||||    
T  52567737 cgtgtgcc 52567730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 41579724 - 41579766
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  41579724 tcggcagttaactaccgaggttttcctcggcagttaactgcag 41579766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 72 - 110
Target Start/End: Complemental strand, 55205349 - 55205311
Alignment:
Q  72 ggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    |||||||||||||||| ||||||||||||||||||||||    
T  55205349 ggcagttaactgccgaggggacaaaaacgtaaattactc 55205311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 11 - 56
Target Start/End: Original strand, 1294077 - 1294122
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcg 56  Q
    ||||||||||||| ||||| |||||||||| |||||||||||||||    
T  1294077 tcggcagttaactgccgaggttttcctcggaagttaactgcagtcg 1294122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 2271432 - 2271395
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagtt 45  Q
    |||||||||||||||||||||| |||||||||||||||    
T  2271432 tcctcggcagttaactcccgaggttttcctcggcagtt 2271395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 4002794 - 4002737
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||||| || ||||||||  |||||||| |||| ||||||    
T  4002794 attttcctcggcagttaactgcagccggatttctaaaacttcggcaattaaatgccga 4002737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 6143747 - 6143702
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||    
T  6143747 tcctcggcagttaactgccgaagttttcctcggcagttaactgcag 6143702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 2 - 115
Target Start/End: Original strand, 13896867 - 13896980
Alignment:
Q  2 agaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgt 101  Q
    |||| ||| ||||||||||||| ||||| ||||||||| ||||||||||||| |   | |  |||||||| ||| ||||||||||| | | ||||||| |    
T  13896867 agaaaatcttcggcagttaactaccgaggttttcctcgacagttaactgcagccagttattaaattcttcagcaattaactgccgaggagtcaaaaacat 13896966  T
Q  102 aaattactcgtgtg 115  Q
    |  |||||||||||    
T  13896967 attttactcgtgtg 13896980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 41577158 - 41577057
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||| ||| ||||  ||||  ||| ||||||||||||  ||| ||| |||||| ||| |||||||||| ||||  | ||||||||    
T  41577158 cagaagatcctcggcagtttactaccgaagtttttgtcgacagttaactgcaaccgattttttaattcatcgacagttaactgtcgaaaaggcaaaaacg 41577059  T
Q  101 ta 102  Q
    ||    
T  41577058 ta 41577057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 49609466 - 49609385
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaact 82  Q
    |||||| |||||||||||||||| ||||| |||| |||| || |||||||| | |||||||| ||||| ||| || ||||||    
T  49609466 cagaagttcctcggcagttaactaccgaggtttttctcgacaattaactgcggccgaatttcaaattcctcgacaattaact 49609385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #97
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 50957686 - 50957739
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    ||||||||||||||||||||||| || ||||| ||||| ||||||| |||||||    
T  50957686 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagctaactgc 50957739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #98
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 87
Target Start/End: Complemental strand, 19750091 - 19750039
Alignment:
Q  35 cctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||| || ||||||||   |||||||||||||||||||    
T  19750091 cctcggcagttaactgcagccgtatttctaaaatttcggcagttaactgccga 19750039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #99
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 19988512 - 19988456
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||| ||||||||| |||||||| || ||||||||  ||||||||||||||||||||    
T  19988512 tttttctcggcagtcaactgcagccgtatttctaaaacttcggcagttaactgccga 19988456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #100
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 99
Target Start/End: Original strand, 43571685 - 43571773
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaac 99  Q
    ||||||||| |||  | |||||||| | ||||||||||||||| ||| |||  ||||| || ||||||||||||||| ||| |||||||    
T  43571685 tcggcagtttactatcaagattttcattggcagttaactgcagccgacttttgaattcctcagcagttaactgccgagggggcaaaaac 43571773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #101
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 74 - 146
Target Start/End: Original strand, 46993234 - 46993306
Alignment:
Q  74 cagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||| ||| ||||||||| | |||||||| || |||  |||||||||||||| ||||| ||||    
T  46993234 cagttaactgccgagggggcaaaaacgtcatttactcgtatggcacagccttatcaaatgtgtgaacagcaat 46993306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #102
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 2950442 - 2950399
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  2950442 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 2950399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #103
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 3493665 - 3493622
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||    
T  3493665 tcctcggcagttaactcccgaggtttttctctgcagttaactgc 3493622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #104
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 3497359 - 3497316
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||||||||| |||| ||| ||||||||||||    
T  3497359 tcctcggcagttaactcccgaggtttttctctgcagttaactgc 3497316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #105
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 6745323 - 6745366
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||    
T  6745323 tcctcggcagttaactaccgaggttttccttggcagttaactgc 6745366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #106
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 10492103 - 10492024
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||| ||||||||||||| || ||||||||  ||||| ||||||||| ||||    
T  10492103 tcctcggtagtttactgccgaagttttcctcgtcagttaactgcagccgtatttctaaaacttcgacagttaactaccga 10492024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #107
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 90
Target Start/End: Complemental strand, 11094164 - 11094106
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagg 90  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||| ||||| |||||||    
T  11094164 ttttcctcggcagttaactgcag-cgtatttctaaaacttcggcagataactaccgaagg 11094106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #108
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 91
Target Start/End: Complemental strand, 19842576 - 19842497
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||||||||  |||  |||||||| |||||||||||||| ||| | | |||   |||||||||||||||||||||||    
T  19842576 cggcagttaactgtcgaagttttcctcagcagttaactgcagccgattctttaaaatttcggcagttaactgccgaaggg 19842497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #109
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 21951840 - 21951793
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgcc 117  Q
    |||||||||||||||||| ||| ||||| |||||| ||||||||||||    
T  21951840 tcggcagttaactgccgagggggcaaaaccgtaaagtactcgtgtgcc 21951793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #110
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 49138690 - 49138647
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  49138690 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 49138647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #111
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 49144453 - 49144496
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||    
T  49144453 tcctcggcagttaactaccgaggttttcttcggcagttaactgc 49144496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #112
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 54392025 - 54392068
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  54392025 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 54392068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #113
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 66915 - 66841
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaaca 144  Q
    |||||||||||||||||| ||| ||||| ||||  ||||||||||| | |  ||||||||||||||  |||||||    
T  66915 tcggcagttaactgccgagggggcaaaagcgtattttactcgtgtgtctcagccttatcaaatgtgtcaacaaca 66841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #114
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 13 - 51
Target Start/End: Original strand, 3501897 - 3501935
Alignment:
Q  13 ggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||| ||||| |||||||||||||||||||||    
T  3501897 ggcagttaactaccgaggttttcctcggcagttaactgc 3501935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #115
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 16 - 82
Target Start/End: Original strand, 45507402 - 45507468
Alignment:
Q  16 agttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaact 82  Q
    |||||||| ||||| |||||||||| |||||||||||| ||| ||| |  ||| |||||||||||||    
T  45507402 agttaactgccgaggttttcctcggtagttaactgcagccgattttatttttcctcggcagttaact 45507468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #116
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 50604420 - 50604462
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||    
T  50604420 tcggcagttaactgccgaggttttcctcggtagttaactgcag 50604462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #117
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 10492870 - 10492915
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| ||||  ||||||||||||||||| |||||    
T  10492870 tcctcggcagttaactgccgaagttttcctcggcagttaattgcag 10492915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #118
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 34 - 115
Target Start/End: Original strand, 19454348 - 19454429
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    |||||||||||||||||||  ||| |||  ||||| || |||||||||||||||  || ||||| ||||  |||||||||||    
T  19454348 tcctcggcagttaactgcaaccgatttttgaattcctcagcagttaactgccgagagggcaaaagcgtattttactcgtgtg 19454429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #119
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 20485528 - 20485573
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||| | ||||  |||||||||||||||||||||||    
T  20485528 tcctcggcagttaattgccgaagttttcctcggcagttaactgcag 20485573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #120
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 11 - 56
Target Start/End: Complemental strand, 34645635 - 34645590
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcg 56  Q
    ||||||||||||| ||||| |||||||||  |||||||||||||||    
T  34645635 tcggcagttaactgccgaggttttcctcgagagttaactgcagtcg 34645590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #121
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Original strand, 34712760 - 34712801
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||| ||||| |||||||||| ||||||||||||    
T  34712760 cggcagttaactgccgaggttttcctcgggagttaactgcag 34712801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #122
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 49
Target Start/End: Original strand, 42760210 - 42760247
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaact 49  Q
    |||||||||||| ||||| |||||||||||||||||||    
T  42760210 cggcagttaactaccgaggttttcctcggcagttaact 42760247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #123
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 46406590 - 46406631
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||| ||||| |||||||||||| ||||||||    
T  46406590 ctcggcagttaactaccgaggttttcctcggcacttaactgc 46406631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #124
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 114
Target Start/End: Original strand, 49196447 - 49196552
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattac 108  Q
    ||||| |||||||||  || | |||||||||| |||||||||||  || |||| |||||| ||| |||||| ||  ||| ||| ||||||||||  ||||    
T  49196447 cctcgacagttaactatcgcggttttcctcggtagttaactgcaaccggatttttaattcctcgacagttagctatcgagggggcaaaaacgtattttac 49196546  T
Q  109 tcgtgt 114  Q
    ||||||    
T  49196547 tcgtgt 49196552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #125
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 9582620 - 9582548
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    |||||||||||||  |||  |||| |||||||||||||||||||||  |||  ||||  ||||||||||||||    
T  9582620 tcggcagttaactgacgaagtttttctcggcagttaactgcagtcggtttttgaatttctcggcagttaactg 9582548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #126
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 32 - 84
Target Start/End: Original strand, 26334343 - 26334395
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    ||||||| ||||||||||||  |||| |||||  |||||||||||||||||||    
T  26334343 tttcctcagcagttaactgctatcgattttctttttcttcggcagttaactgc 26334395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #127
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 146
Target Start/End: Complemental strand, 29929500 - 29929364
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    ||||||||||||||  |||| ||||||||||||||||| ||||| ||  |||  ||||| ||  |||||||||| ||| ||  ||||| | ||  |||||    
T  29929500 ctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttact 29929401  T
Q  110 cgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
     ||||||| |  |||||| |||||||  |||||||||    
T  29929400 tgtgtgcctcagccttataaaatgtgtcaacaacaat 29929364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #128
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 10 - 146
Target Start/End: Complemental strand, 29978654 - 29978518
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    ||||||||||||||  |||| ||||||||||||||||| ||||| ||  |||  ||||| ||  |||||||||| ||| ||  ||||| | ||  |||||    
T  29978654 ctcggcagttaactatcgaggttttcctcggcagttaattgcagccggtttttgaattcctcaacagttaactgtcgagggagcaaaatcatattttact 29978555  T
Q  110 cgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
     ||||||| |  |||||| |||||||  |||||||||    
T  29978554 tgtgtgcctcagccttataaaatgtgtcaacaacaat 29978518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #129
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 68 - 112
Target Start/End: Original strand, 33305017 - 33305061
Alignment:
Q  68 cttcggcagttaactgccgaagggacaaaaacgtaaattactcgt 112  Q
    |||||| |||||||||||| |||||||||||||| | ||||||||    
T  33305017 cttcggtagttaactgccgcagggacaaaaacgtcatttactcgt 33305061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #130
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 46347711 - 46347763
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||| ||| ||||||| |  |||| |||||||||||||||||||||||    
T  46347711 cagaagatcttcgacagttaattatcgaggttttcctcggcagttaactgcag 46347763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #131
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 12 - 84
Target Start/End: Complemental strand, 49195025 - 49194953
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    |||||||||||| |||| ||||||||   ||||||||||||| ||  ||| |||||| || ||||||||||||    
T  49195025 cggcagttaactaccgaaattttccttaacagttaactgcagccggctttttaattcctcagcagttaactgc 49194953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 83; Significance: 5e-39; HSPs: 64)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 31768829 - 31768691
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||| || |||| |||||| |||||||||||||||||| ||| |||||| ||||||||    
T  31768829 tcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttaactgccgagggggcaaaaaagtaaatta 31768730  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||  |||  |||||||||||||||||||||||||    
T  31768729 ctcgtgttacacagccttatcaaatgtgggaacaacaat 31768691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 29076320 - 29076458
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||| || ||||||||  ||||| |||||||||||||||||| ||||||||| |||||    
T  29076320 tcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaatta 29076419  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || |||||||||  ||||||  || ||||||||||||||    
T  29076420 cttgtgtgccacagccttatgcaacgtgggaacaacaat 29076458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 29109853 - 29109991
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||| || ||||||||  ||||| |||||||||||||||||| ||||||||| |||||    
T  29109853 tcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaatta 29109952  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || |||||||||  ||||||  || ||||||||||||||    
T  29109953 cttgtgtgccacagccttatgcaacgtgggaacaacaat 29109991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 29111293 - 29111431
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| |||||||| |||||||||||||| || ||||||||  ||||| |||||||||||||||||| ||||||||| |||||    
T  29111293 tcctcggcagttaactaccgaggttttcctcagcagttaactgcagccggatttctaaaacttcgacagttaactgccgaaggggcaaaaacgtcaatta 29111392  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || |||||||||  ||||||  || ||||||||||||||    
T  29111393 cttgtgtgccacagccttatgcaacgtgggaacaacaat 29111431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 11840247 - 11840385
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||| |||||||||||  ||||||||||||||| || | ||| ||||||| | |||||    
T  11840247 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttctaaaacttcggcagttaactaccaagggggcaaaaacatcaatta 11840346  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  ||||||  |||||||||||||||||    
T  11840347 ctcgtgtgtcacagccttatgcaatgtgggaacaacaat 11840385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 34 - 146
Target Start/End: Complemental strand, 29061346 - 29061234
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatg 133  Q
    ||||||| |||||||||||| |||||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||  ||||||  ||||    
T  29061346 tcctcggaagttaactgcagccgaatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatgtaatg 29061247  T
Q  134 tgggaacaacaat 146  Q
    |||||||| ||||    
T  29061246 tgggaacaccaat 29061234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 14012372 - 14012509
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||||| |||||||| ||||  |||||||||||||||||||| || || ||||||||  ||||||||||||||||| |||||| ||||||||| | |||    
T  14012372 tcctcggtagttaactgccgatgttttcctcggcagttaactgaagccggatttctaaaacttcggcagttaactgctgaaggg-caaaaacgtcattta 14012470  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  |||||| ||||||||||||||||||    
T  14012471 ctcgtgtggcacagccttattaaatgtgggaacaacaat 14012509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 29065782 - 29065678
Alignment:
Q  42 agttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaaca 141  Q
    |||||||||||| || ||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||  ||||||  ||||||||||||    
T  29065782 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29065683  T
Q  142 acaat 146  Q
    |||||    
T  29065682 acaat 29065678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 29074795 - 29074691
Alignment:
Q  42 agttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaaca 141  Q
    |||||||||||| || ||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||  ||||||  ||||||||||||    
T  29074795 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29074696  T
Q  142 acaat 146  Q
    |||||    
T  29074695 acaat 29074691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 29079559 - 29079455
Alignment:
Q  42 agttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaaca 141  Q
    |||||||||||| || ||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||  ||||||  ||||||||||||    
T  29079559 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29079460  T
Q  142 acaat 146  Q
    |||||    
T  29079459 acaat 29079455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 29107368 - 29107264
Alignment:
Q  42 agttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaaca 141  Q
    |||||||||||| || ||||||||||| |||||||||||||||||| ||| |||||| ||||||||||||||||||||  ||||||  ||||||||||||    
T  29107368 agttaactgcagccggatttctaattcctcggcagttaactgccgagggggcaaaaaagtaaattactcgtgtgccacagccttatttaatgtgggaaca 29107269  T
Q  142 acaat 146  Q
    |||||    
T  29107268 acaat 29107264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 7361258 - 7361156
Alignment:
Q  17 gttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgc 116  Q
    ||||||| |||||  |||||||||||||||||||||| ||  |||  || || || |||||||| |||||| ||||||||||||||||||||||||||||    
T  7361258 gttaactaccgaggatttcctcggcagttaactgcagccggtttttaaaatcctcagcagttaattgccgacgggacaaaaacgtaaattactcgtgtgc 7361159  T
Q  117 cac 119  Q
    |||    
T  7361158 cac 7361156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 8 - 116
Target Start/End: Complemental strand, 2051104 - 2050997
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||| |||| ||||| ||||| ||||||||||||||||||||||  ||  |||| ||||| |||||||||||||||||||||  ||||||||||  |||    
T  2051104 tcctctgcagataactaccgaggttttcctcggcagttaactgcaaccgg-tttcaaattcatcggcagttaactgccgaaggagcaaaaacgtatttta 2051006  T
Q  108 ctcgtgtgc 116  Q
    |||||||||    
T  2051005 ctcgtgtgc 2050997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 13401569 - 13401473
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaa 97  Q
    |||||||||||||| |||||||| || | ||||||||  |||||||||||||| ||| ||| |||||| |||||||||||||||||| ||| |||||    
T  13401569 cagaagatcctcggtagttaactaccaatattttccttagcagttaactgcagccgattttttaattcctcggcagttaactgccgagggggcaaaa 13401473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 23958964 - 23958872
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    |||||||||||||| ||||| |||||||||||| |||||||||| ||  |||  ||||  |||||||||||||||||| ||||||||||||||    
T  23958964 ctcggcagttaactaccgaggttttcctcggcatttaactgcagccggttttggaatttctcggcagttaactgccgaggggacaaaaacgta 23958872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 8 - 139
Target Start/End: Original strand, 28362728 - 28362862
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaa---ctgccgaagggacaaaaacgtaaa 104  Q
    ||||| ||||||||||  |||| ||||||||||||||||||||||| || ||||| ||||| |||||||||||   ||||||| |||  |||||||| |     
T  28362728 tcctctgcagttaactatcgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgctgccgacggggtaaaaacgtcat 28362827  T
Q  105 ttactcgtgtgccacgtccttatcaaatgtgggaa 139  Q
    ||||||||||| |||  ||||||  ||||||||||    
T  28362828 ttactcgtgtggcacagccttatgtaatgtgggaa 28362862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 42 - 117
Target Start/End: Original strand, 2052615 - 2052689
Alignment:
Q  42 agttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgcc 117  Q
    |||||||||||| ||| |||| ||||| ||| |||||||||||||| |||||||||||||||||||||||||||||    
T  2052615 agttaactgcagccga-tttcaaattcctcgacagttaactgccgaggggacaaaaacgtaaattactcgtgtgcc 2052689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 11691877 - 11691788
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt---ctaattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||   | |||  |||||||||||||||||||||    
T  11691877 cagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagcaaat--ttcggcagttaactgccgaag 11691788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 6204910 - 6204821
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt-ctaattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||   ||   |||||||||||||||||||||    
T  6204910 cagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 6204821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 5 - 89
Target Start/End: Complemental strand, 22305187 - 22305102
Alignment:
Q  5 agatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||| || |||| | ||   |||||||||||||||||||||    
T  22305187 agatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 22305102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 12783947 - 12784063
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| | ||| ||||||||| ||| ||||||||| ||  | |  ||||| |||||||||||||||||| ||| ||||| ||    
T  12783947 cagaagatcctcggcagttaactactgaggttttcctcgacagctaactgcagccggttattgaattcatcggcagttaactgccgatggggcaaaagcg 12784046  T
Q  101 taaattactcgtgtgcc 117  Q
    ||  ||||| |||||||    
T  12784047 tattttacttgtgtgcc 12784063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 31146449 - 31146373
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    |||||||||||||||| ||||  ||||||||| ||||||||||||| || ||||| ||||| |||||||||||||||    
T  31146449 tcctcggcagttaactaccgatgttttcctcgacagttaactgcagccggatttcaaattcctcggcagttaactgc 31146373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 31771738 - 31771867
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaa-ttcttcggcagttaactgccgaagggacaaaaacgtaaatt 106  Q
    ||||||||| |||||| ||||||||||||||||||||||||||||| || |||||||| |||||          || ||||  || |||||| |||||||    
T  31771738 tcctcggcaattaactaccgagattttcctcggcagttaactgcagccggatttctaatttctt----------ctaccgagagggcaaaaaagtaaatt 31771827  T
Q  107 actcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||  ||||||||||| ||||| |||||||    
T  31771828 actcgtgtgccacagccttatcaaatatgggatcaacaat 31771867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 13388705 - 13388784
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||| ||||||||| ||||||||||||| |||||||  ||||  ||||||||||||| ||||    
T  13388705 tcctcggcagttaactaccgaggttttcctcgacagttaactgcagccgaatttgaaatttctcggcagttaactaccga 13388784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 18606118 - 18606012
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||| | ||||| ||||||||||||||||||||||| ||  | || ||||| | ||||||||||| |||| ||| ||||||||||  |||||    
T  18606118 ctcggcagttaagtaccgaggttttcctcggcagttaactgcagccg-gtgtcaaattcctaggcagttaactaccgagggggcaaaaacgtattttact 18606020  T
Q  110 cgtgtgcc 117  Q
    ||||||||    
T  18606019 cgtgtgcc 18606012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 31 - 145
Target Start/End: Original strand, 31151058 - 31151172
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    ||||||| ||||||||||||||| || ||||| ||   |||| |||||||||||||| | | |||||||||||| ||||||||||| ||  ||  |||||    
T  31151058 ttttccttggcagttaactgcagccggatttcaaaaatttcgacagttaactgccgaggaggcaaaaacgtaaaatactcgtgtgcaacagccaaatcaa 31151157  T
Q  131 atgtgggaacaacaa 145  Q
    |||| ||||||||||    
T  31151158 atgtaggaacaacaa 31151172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 13 - 87
Target Start/End: Original strand, 32643523 - 32643597
Alignment:
Q  13 ggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||| ||||| ||||||||| ||||||||||||| || |||| |||||| | ||||||||||||||||    
T  32643523 ggcagttaactaccgaggttttcctcgacagttaactgcagccggatttttaattccttggcagttaactgccga 32643597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 29068263 - 29068320
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaa 65  Q
    |||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||||||    
T  29068263 tcctcggcagttaactaccgagatttttctcagcaattaactgcagtcgaatttctaa 29068320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 65
Target Start/End: Original strand, 29083510 - 29083567
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaa 65  Q
    |||||||||||||||| |||||||||| ||| ||| ||||||||||||||||||||||    
T  29083510 tcctcggcagttaactaccgagatttttctcagcaattaactgcagtcgaatttctaa 29083567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 2109570 - 2109514
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||    
T  2109570 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 2109514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 37 - 117
Target Start/End: Complemental strand, 7537245 - 7537165
Alignment:
Q  37 tcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgcc 117  Q
    |||| |||||||||||| ||  ||| |||||| ||| || ||||||||||| ||| |||||||||||||||||||||||||    
T  7537245 tcggtagttaactgcagccggttttttaattcctcgacaattaactgccgagggggcaaaaacgtaaattactcgtgtgcc 7537165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 8193206 - 8193282
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    ||||||||||||||||  |||  ||||||||||||||||||||||| ||  ||| |||||| |||||||||||||||    
T  8193206 tcctcggcagttaactgtcgaagttttcctcggcagttaactgcagccgtgtttttaattcctcggcagttaactgc 8193282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 26351093 - 26351173
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaa 88  Q
    |||||||||||||||||||||| ||||||||||||||||||||| | ||  || ||||  ||||| |||||||||| ||||    
T  26351093 tcctcggcagttaactcccgaggttttcctcggcagttaactgccgccggtttactaaaacttcgacagttaactgtcgaa 26351173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 11 - 127
Target Start/End: Original strand, 29097828 - 29097944
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||  |||| ||| |||||||||||||| || ||||||||   |||| ||||||| ||||||  | ||||| |||| ||||||||    
T  29097828 tcggcagttaactaccgaagtttttctcagcagttaactgcagccggatttctaaaatttcgacagttaattgccgagagaacaaatacgtcaattactc 29097927  T
Q  111 gtgtgccacgtccttat 127  Q
    ||||||||  |||||||    
T  29097928 gtgtgccaaatccttat 29097944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 9048151 - 9048068
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||| ||  ||| | |  ||||||||||||||||||||||||    
T  9048151 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactgccgaaggg 9048068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 29286282 - 29286167
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    ||||||||||||||||||||||  ||  ||  || ||| ||||||||||||| |||| ||| ||||||||||||||||| ||||||| |  ||||||  |    
T  29286282 ttttcctcggcagttaactgcaaccggtttcttatttcctcggcagttaactaccgagggggcaaaaacgtaaattacttgtgtgcctcaaccttatgca 29286183  T
Q  131 atgtgggaacaacaat 146  Q
    |||||  |||||||||    
T  29286182 atgtgtcaacaacaat 29286167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 72 - 146
Target Start/End: Original strand, 117897 - 117969
Alignment:
Q  72 ggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||||||| || ||||| ||||||||||||||||||||||| |||  |||||||||||||||||||| ||||    
T  117897 ggcagttaactacc-aaggg-caaaaacgtaaattactcgtgtgacacaaccttatcaaatgtgggaacatcaat 117969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 18347095 - 18347038
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||||| || |||||  |||| ||||||||||||||||||    
T  18347095 attttcctcggcagttaactgcagccggatttcagattcctcggcagttaactgccga 18347038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 91
Target Start/End: Original strand, 9049076 - 9049164
Alignment:
Q  3 gaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||| |||||||||||||||| ||||  |||||||||| |||||||||||| ||  ||| | |  |||||||||||||||| |||||||    
T  9049076 gaagttcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggttttttcaaacttcggcagttaactgtcgaaggg 9049164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 15888799 - 15888879
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagg 90  Q
    ||||||||| |||| |||   ||||||||||||||||||||||| ||  |||||||  |||||| ||||||||||||||||    
T  15888799 ctcggcagtaaactaccgcagttttcctcggcagttaactgcagccggttttctaaaacttcggtagttaactgccgaagg 15888879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 16192843 - 16192751
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    |||||||||||||| |||||  |||||||| || |||||||||| ||| |||  ||||  ||| |||||||||||||| ||| ||||||||||    
T  16192843 ctcggcagttaactgccgaggctttcctcgacacttaactgcagccgatttttaaattactcgacagttaactgccgagggggcaaaaacgta 16192751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 18610226 - 18610309
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    ||||||||||||||||| ||||| ||  |||| ||||| |||||| |||||| |||||||| ||||||||||  |||||||||||    
T  18610226 ttttcctcggcagttaaatgcagccgg-tttcaaattcctcggcatttaactaccgaaggggcaaaaacgtattttactcgtgtg 18610309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 25554758 - 25554702
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| ||||||||||||||| || ||||||||  ||||||||||||||||||||    
T  25554758 ttttcctaggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 25554702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 26712124 - 26712040
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| | ||| || || ||  ||||||||||| ||| ||||||||    
T  26712124 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccgatttcctaaaaacttcggcagtttactaccgaaggg 26712040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 32223510 - 32223590
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaa 88  Q
    |||||||||||||||| ||||  ||||||||||  ||||||||||| ||| ||| | |  |||||||||||||||||||||    
T  32223510 tcctcggcagttaactaccgaagttttcctcggtggttaactgcagccgattttttcaaacttcggcagttaactgccgaa 32223590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 13382705 - 13382662
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  13382705 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 13382662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 17597521 - 17597564
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||||||||  |||||||||||||||||||||    
T  17597521 tcctcggcagttaactcccgaagttttcctcggcagttaactgc 17597564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 28249961 - 28249918
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  28249961 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 28249918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 6760869 - 6760943
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaact 82  Q
    ||||||| |||| ||| ||||  |||||||||||| |||||||||| || ||||||||  |||||||||||||||    
T  6760869 tcctcggtagtttactgccgaagttttcctcggcaattaactgcagccgtatttctaaaacttcggcagttaact 6760943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 30258315 - 30258357
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||||||||||||| |||||||||||||    
T  30258315 tcggcagttaactgccgagattttcctcgacagttaactgcag 30258357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 17597009 - 17596972
Alignment:
Q  16 agttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||| |||||||||||||||||||||||||||||    
T  17597009 agttaactgccgagattttcctcggcagttaactgcag 17596972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 18351643 - 18351683
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||| ||||| |||||||||||||||||||||    
T  18351643 tcggcagttaactaccgaggttttcctcggcagttaactgc 18351683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 25141099 - 25141214
Alignment:
Q  31 ttttcctcggcagttaactgcag-tcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatca 129  Q
    |||||||||||||||||||| || | | ||||  ||||| ||| ||||||||||||||| |||||||||  ||||||| ||||||||| |  ||||||      
T  25141099 ttttcctcggcagttaactgtagctggtatttg-aattcctcgacagttaactgccgaatggacaaaaatataaattattcgtgtgcctcagccttatgc 25141197  T
Q  130 aatgtgggaacaacaat 146  Q
    ||||||  |||||||||    
T  25141198 aatgtgtcaacaacaat 25141214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 3502659 - 3502761
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    ||||||| ||||||||||||||||| ||||  ||  ||||||| ||||| ||| |||| | ||||||||| | ||||||||||| |||  |||||| |||    
T  3502659 tttcctcagcagttaactgcagtcggattttcaaaacttcggccgttaattgctgaagag-caaaaacgtcatttactcgtgtgacacaaccttatgaaa 3502757  T
Q  132 tgtg 135  Q
    ||||    
T  3502758 tgtg 3502761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 6207057 - 6207100
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  6207057 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 6207100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 11694024 - 11694067
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  11694024 tcctcggcagttaactaccgaggttttcctcggcaattaactgc 11694067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 11 - 118
Target Start/End: Complemental strand, 19757345 - 19757238
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    |||| |||||||| ||||  |||| ||||  ||||||||||||| | ||||||||  ||||| ||||||| |||| | ||| |||||| || ||||| ||    
T  19757345 tcggtagttaactaccgaagtttttctcgatagttaactgcagttggatttctaaaacttcgacagttaattgccaagggggcaaaaatgtcaattattc 19757246  T
Q  111 gtgtgcca 118  Q
    ||||||||    
T  19757245 gtgtgcca 19757238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 27616791 - 27616748
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||    
T  27616791 tcctcggcagttaactaccgaggttttcttcggcagttaactgc 27616748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 31 - 114
Target Start/End: Original strand, 35021283 - 35021366
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgt 114  Q
    ||||||||||||||||||||||| ||  |||  |||||||| ||| ||||||||||| ||| |||||  |||  ||||||||||    
T  35021283 ttttcctcggcagttaactgcagccggtttttgaattcttccgcatttaactgccgagggggcaaaagtgtattttactcgtgt 35021366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 11687949 - 11688027
Alignment:
Q  68 cttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||| |||||||||||| ||||  |||||||| | ||||||||||| |||  ||||||  |||||||||||| ||||    
T  11687949 cttcggtagttaactgccgcaggggtaaaaacgtcatttactcgtgtggcacagccttatgtaatgtgggaacagcaat 11688027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 9 - 50
Target Start/End: Original strand, 24088784 - 24088825
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactg 50  Q
    ||||| ||||||||| ||||||||||||||| ||||||||||    
T  24088784 cctcgacagttaactaccgagattttcctcgacagttaactg 24088825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 48
Target Start/End: Original strand, 15546386 - 15546426
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaac 48  Q
    |||||||||||||||| ||||  ||||||||||||||||||    
T  15546386 tcctcggcagttaactgccgaagttttcctcggcagttaac 15546426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 24721962 - 24721998
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||| ||||| |||||||||||||||||||||    
T  24721962 cagttaactaccgaggttttcctcggcagttaactgc 24721998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 26712223 - 26712263
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||| |||||||| ||||| |||||||||||||||||||||    
T  26712223 tcggtagttaactaccgaggttttcctcggcagttaactgc 26712263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176 (Bit Score: 81; Significance: 7e-38; HSPs: 2)
Name: scaffold0176
Description:

Target: scaffold0176; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 34 - 142
Target Start/End: Complemental strand, 872 - 764
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatg 133  Q
    |||||||||||||||||||| || ||||||||||||||||||||||| | |||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  872 tcctcggcagttaactgcagccggatttctaattcttcggcagttaattaccgaaggggcaaaaacgtaaattactcgtgtgccacaaccttatcaaatg 773  T
Q  134 tgggaacaa 142  Q
    |||||||||    
T  772 tgggaacaa 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0176; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 3584 - 3660
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||||| | |||  |||| ||||  ||||| |||||||||  ||||||| |||||||||||||||||    
T  3584 tcggcagttaactgcctagggggaaaaatcgtattttactagtgtgccactaccttatcgaatgtgggaacaacaat 3660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 1e-36; HSPs: 85)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 542780 - 542918
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||| |||||| || ||||||||||| ||| |||||||||||||| || |||   | |    
T  542780 cagaagatcctcggcagttaactaccgagagtttcctcggcagttagctgcagccggatttctaattcctcgacagttaactgccgatggaacatttagg 542879  T
Q  101 taaattactcgtgtgccacgtccttatcaaatgtgggaa 139  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  542880 taaattactcgtgtgccacaaccttatcaaatgtgggaa 542918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 1397371 - 1397485
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    |||| ||||||||||||||||| || ||||||||||| || ||||||||||||||| ||| |||||| ||||||||||||||||||||  ||||||||||    
T  1397371 tttcatcggcagttaactgcagccggatttctaattcctcagcagttaactgccgagggggcaaaaatgtaaattactcgtgtgccacaaccttatcaaa 1397470  T
Q  132 tgtgggaacaacaat 146  Q
    |||||||||||||||    
T  1397471 tgtgggaacaacaat 1397485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 34122600 - 34122462
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||| ||||| ||||  |||    
T  34122600 tcctcggcagttaactaccgagcttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggggcaaaatcgtatttta 34122501  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||  |||| |||  ||||||||||| |||||||||||||    
T  34122500 ctaatgtggcacaaccttatcaaatatgggaacaacaat 34122462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 7762241 - 7762378
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||||| ||| ||||||||| ||||||||||||  |||||||||||  ||||||||||||||||||| |||| ||||||||| |||||    
T  7762241 tcctcggcagttaactcctgaggttttcctcgacagttaactgcaaccgaatttctaaaacttcggcagttaactgccg-aggggcaaaaacgtcaatta 7762339  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  ||||||  |||||||||||| ||||    
T  7762340 ctcgtgtggcacagccttatgtaatgtgggaacagcaat 7762378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 39743145 - 39743283
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||  ||||||| ||||| |||||||||||||||||||||||||||||||| ||||| |||||||||||||| ||| ||| ||||| | ||  |||    
T  39743145 tcctcggtggttaactgccgaggttttcctcggcagttaactgcagtcgaatttcaaattcctcggcagttaactgtcgagggggcaaaatcatatttta 39743244  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||| |||  |||||||||||||||||||||||||    
T  39743245 ctagtgtggcacagccttatcaaatgtgggaacaacaat 39743283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 41798894 - 41798756
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||| ||||| ||||| ||||| ||||||||||||||||| || ||||| |||||||| ||||||||||||||| ||| ||||| | ||  |||    
T  41798894 tcctcggcagataactaccgaggttttcttcggcagttaactgcagccggatttcaaattcttcagcagttaactgccgagggggcaaaatcatatttta 41798795  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||| |||| ||||||||| |||||||||||||||    
T  41798794 ctagtgtggcacggccttatcaattgtgggaacaacaat 41798756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 18307337 - 18307226
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| ||| ||| |||||| ||| |||||||||||||||||  ||||||||    
T  18307337 cagaagatcctcggcagttaactaccgaggttttcctcggcagttaactacagccgattttttaattcctcgacagttaactgccgaaggagcaaaaacg 18307238  T
Q  101 taaattactcgt 112  Q
    ||  ||||||||    
T  18307237 tattttactcgt 18307226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 17966883 - 17967021
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||| |||||||||| |||||||||||||||| ||||||||||||||| |||| |||||  |||||||||||||||||| |||  |||| ||||  |||    
T  17966883 tcctcagcagttaactaccgagattttcctcggtagttaactgcagtcggatttttaatttctcggcagttaactgccgagggggtaaaatcgtatttta 17966982  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||  | |  |||||||||||||||||||||||||    
T  17966983 ctagtgtttctcagccttatcaaatgtgggaacaacaat 17967021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 41799764 - 41799902
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||| |||||||||| ||||  ||||| |||||||||||||||||    ||||||||||| || ||||||||||| ||| ||| |||||| ||||||||    
T  41799764 tcctcagcagttaacttccgaagttttcatcggcagttaactgcagctagatttctaattcctcagcagttaactgtcgagggggcaaaaaagtaaatta 41799863  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||   ||||||||||||||||||||||||    
T  41799864 ctcgtgtgtcacagtcttatcaaatgtgggaacaacaat 41799902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 33 - 146
Target Start/End: Original strand, 30887382 - 30887495
Alignment:
Q  33 ttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaat 132  Q
    ||||||||||||||||||||| || ||||||||||| |  ||||||||||||| | |   |||||||||||||||||||||||||||  | |||||||||    
T  30887382 ttcctcggcagttaactgcagccggatttctaattccttagcagttaactgcctaggaagcaaaaacgtaaattactcgtgtgccacaacgttatcaaat 30887481  T
Q  133 gtgggaacaacaat 146  Q
    ||||||||||||||    
T  30887482 gtgggaacaacaat 30887495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 34123933 - 34124070
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattac 108  Q
    ||||||||||||||| ||||| ||||||| ||||||||||||||| || ||||| ||||  ||| |||||||||||||| ||| ||||| ||||  ||||    
T  34123933 cctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttcaaatttctcgacagttaactgccgagggggcaaaatcgtattttac 34124032  T
Q  109 tcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    | ||||| |||  |||||| ||||||||||||||||||    
T  34124033 tggtgtggcacaaccttattaaatgtgggaacaacaat 34124070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 7757401 - 7757294
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||||||||||||||  |||| ||||||||||||||||||||||| || ||||||||  |||||||||||||||| ||| ||| ||||||||| | |||    
T  7757401 tcctcggcagttaactagcgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgagggggcaaaaacgtcattta 7757302  T
Q  108 ctcgtgtg 115  Q
    ||||||||    
T  7757301 ctcgtgtg 7757294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 11346090 - 11345946
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||| ||||||||| ||||| |||||||||||||||||||||||  | ||||||||  |||||||||||||||| | || || ||||||||    
T  11346090 cagaagatcctcgacagttaactaccgaggttttcctcggcagttaactgcagctggatttctaaaacttcggcagttaactgtcaaaagg-caaaaacg 11345992  T
Q  101 taaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    | | ||||| ||||| |||  |||||||||||| |  |||||||||    
T  11345991 tcatttacttgtgtggcacagccttatcaaatgcgtaaacaacaat 11345946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 17965925 - 17965787
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||||||| |||||| ||||  ||||||||||||||||||||||||||||||| |||||| ||| || ||||||||||| |||| |||| ||||  |||    
T  17965925 tcctcggcaattaactaccgatgttttcctcggcagttaactgcagtcgaatttttaattcctcgacaattaactgccgaggggataaaatcgtatttta 17965826  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || |||   | |  |||||||||| ||||||||||||||    
T  17965825 ctagtgattctcagccttatcaaaagtgggaacaacaat 17965787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 20192436 - 20192291
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    |||||||||||||||| ||||||  |||  ||||||||||||||||||||||| ||| | |  |||||||| ||||||||||| ||||||| ||||| ||    
T  20192436 cagaagatcctcggcatttaactatcgaagttttcctcggcagttaactgcagccgattattgaattcttcagcagttaactgacgaaggggcaaaatcg 20192337  T
Q  101 taaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||  ||||| ||||||| |  |||||| |||||||  |||||||||    
T  20192336 tattttacttgtgtgcctcagccttatgaaatgtgtcaacaacaat 20192291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 13568094 - 13568210
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatca 129  Q
    |||||||||||||||||||||||| || ||||| ||||| ||||||||||||| |||| |||  |||||||| | |||||||| || |||  ||||||      
T  13568094 attttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactaccgatggggtaaaaacgtcatttactcgtatggcacagccttatgt 13568193  T
Q  130 aatgtgggaacaacaat 146  Q
    |||||||||||||||||    
T  13568194 aatgtgggaacaacaat 13568210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 28388519 - 28388623
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||| |||||||||||||||||||||||  | ||||| ||||| ||||||| |||||||||| ||| |||||  ||||| |||||    
T  28388519 tcggcagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagctaactgccgagggggcaaaagagtaaaatactc 28388618  T
Q  111 gtgtg 115  Q
    |||||    
T  28388619 gtgtg 28388623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 13 - 87
Target Start/End: Complemental strand, 5847 - 5773
Alignment:
Q  13 ggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||| ||||| |||||||||||| ||||||||||||| ||||||||  ||||||||||||||||||||    
T  5847 ggcagttaactaccgaggttttcctcggcaattaactgcagtcgtatttctaaaacttcggcagttaactgccga 5773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 25897076 - 25897214
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||||  |||||| ||||||||||||||| || | ||| ||||| |||| |||||||||||||||||  ||||   ||  |||    
T  25897076 tcctcggcagttaactaccgaggatttcctgggcagttaactgcagccggagttcaaattcctcggtagttaactgccgaaggggtaaaataatatttta 25897175  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||| |||  |||||||| ||||||||||||||||    
T  25897176 ctagtgtggcacaaccttatcacatgtgggaacaacaat 25897214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 27867839 - 27867955
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatca 129  Q
    ||||||||||||||| |||||||| || | ||| ||||| |||||||||||||||||| |||  |||| ||||  ||||| ||||| |||  ||||||||    
T  27867839 attttcctcggcagtaaactgcagccggaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtggcacagccttatca 27867938  T
Q  130 aatgtgggaacaacaat 146  Q
     ||||||||||||||||    
T  27867939 catgtgggaacaacaat 27867955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 43094596 - 43094700
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    ||||||||||||||||||||||| || ||||||||  |||||||||||||||| ||| |||  |||||||| | ||||||||||| ||   |||||||||    
T  43094596 ttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgatggggtaaaaacgtcatttactcgtgtggcataaccttatcaa 43094695  T
Q  131 atgtg 135  Q
    |||||    
T  43094696 atgtg 43094700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 25890070 - 25889963
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||| ||| ||||| |||||||||| ||||||||||||||| ||||| ||||| ||||||||| ||||| || ||| |||||  ||||| ||    
T  25890070 tcctcggcagtttactaccgaggttttcctcggtagttaactgcagtcggatttcaaattcctcggcagtttactgctgagggggcaaaagagtaaaata 25889971  T
Q  108 ctcgtgtg 115  Q
    || |||||    
T  25889970 cttgtgtg 25889963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 91 - 146
Target Start/End: Complemental strand, 38407192 - 38407137
Alignment:
Q  91 gacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  38407192 gacaaaaacgtaaattactcgtgtgccacaaccttatcaaatgtgggaacaacaat 38407137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 1035260 - 1035122
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||||||||||||||  ||||  ||||||||| | |||||||||| |||| ||| ||||| |||||||||||||||||| |||  |||| ||||  |||    
T  1035260 tcctcggcagttaactatcgaggatttcctcggtaattaactgcagccgaaattcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 1035161  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
     | ||||| |||  |||||||| | ||||||||||||||    
T  1035160 ttagtgtggcacagccttatcacacgtgggaacaacaat 1035122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 4 - 89
Target Start/End: Complemental strand, 30708983 - 30708897
Alignment:
Q  4 aagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaag 89  Q
    |||||||||||||||||||||||||| ||| ||||||||||||||||||| || |||| | ||   |||||||||||||||||||||    
T  30708983 aagatcctcggcagttaactcccgaggtttccctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 30708897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 19037460 - 19037549
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt-ctaattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||   ||   |||||||||||||||||||||    
T  19037460 cagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 19037549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 38968170 - 38968077
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    |||||||||||||||  |||| ||||||||||||||||||||||| || |||| | |||| |||| |||||||| |||||||  ||||||||||    
T  38968170 cctcggcagttaactatcgaggttttcctcggcagttaactgcagccggattttttattcctcggtagttaactaccgaaggatcaaaaacgta 38968077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 25497594 - 25497542
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  25497594 cagaagattctcggcagttaactaccgagattttcctcggcagttaactgcag 25497542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 9 - 83
Target Start/End: Original strand, 8702196 - 8702270
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    ||||| ||||||||| ||||| |||||||| ||||||||||||||||  |||| |||||| ||||||||||||||    
T  8702196 cctcgtcagttaactaccgaggttttcctcagcagttaactgcagtcagatttttaattcctcggcagttaactg 8702270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 25877697 - 25877560
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||  ||||||||||||||||| ||||| ||  |||| ||||| |||||| |||| |||||||| |  |||||||||  |||    
T  25877697 tcctcggcagttaactaccgaagttttcctcggcagttaattgcagccg-gtttcgaattcctcggcatttaattgccgaagtggtaaaaacgtatttta 25877599  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  ||||||  ||||||  |||||||||    
T  25877598 ctcgtgtgacacaaccttatgcaatgtgtcaacaacaat 25877560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 8041 - 8126
Alignment:
Q  5 agatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaag 89  Q
    |||||||||| |||||||| ||||||||||||||||||||||||||||  || |||||| |||  ||||||| ||| |||||||||    
T  8041 agatcctcggtagttaactaccgagattttcctcggcagttaactgcaaccgtatttctaaatatttcggcatttagctgccgaag 8126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 8539535 - 8539592
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||    
T  8539535 attttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccga 8539592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 33995145 - 33995234
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaa 97  Q
    |||||||||||||||||||||| ||||||||||||||||| ||||  ||| |||  ||||  |||||||||||||| ||| |||| ||||    
T  33995145 tcctcggcagttaactcccgaggttttcctcggcagttaattgcatccgatttttgaatttctcggcagttaactgtcgaggggataaaa 33995234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 145
Target Start/End: Complemental strand, 1396285 - 1396233
Alignment:
Q  93 caaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaa 145  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||||||||    
T  1396285 caaaaacgtaaattacctgtgtgccacatccttatcaaatgtgggaacaacaa 1396233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 3891536 - 3891480
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||    
T  3891536 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 3891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 146
Target Start/End: Original strand, 18538334 - 18538470
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||  ||||||||||||||||||||||| ||  |||  ||||| ||| || ||||||||||| ||| ||||| ||||  |||||    
T  18538334 ctcggcagttaactaccgaagttttcctcggcagttaactgcagccggtttttgaattcctcgacaattaactgccgagggggcaaaatcgtattttact 18538433  T
Q  110 cgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
     ||||||| |  ||| || |||||||  |||||||||    
T  18538434 tgtgtgcctcagcctaatgaaatgtgtcaacaacaat 18538470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 32 - 135
Target Start/End: Original strand, 14684 - 14786
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    |||||||||||||||||| ||| || ||||||||  ||||||||||||||||||||| |||||     |||| ||||||||||| |||  ||||||||||    
T  14684 tttcctcggcagttaactacagccgtatttctaaaacttcggcagttaactgccgaa-ggacatttgagtaatttactcgtgtggcacaaccttatcaaa 14782  T
Q  132 tgtg 135  Q
    ||||    
T  14783 tgtg 14786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 99
Target Start/End: Complemental strand, 3600420 - 3600321
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcag-tcgaatttctaattcttcggcagttaactgccgaagggacaaaaac 99  Q
    ||||||||||||||| |||||||  |||| ||||||| ||||||||||||||| | |   || ||||| ||||||||||||||||||| ||| |||||||    
T  3600420 cagaagatcctcggctgttaactatcgaggttttccttggcagttaactgcagctggttattataattattcggcagttaactgccgagggggcaaaaac 3600321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 10 - 116
Target Start/End: Original strand, 4204210 - 4204314
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||| ||||||||| |||||||||||||  |  |||| ||||  ||| |||||||||| |||  || |||||||||||||||||    
T  4204210 ctcggcagttaactaccgaggttttcctcgacagttaactgcagcgg--tttcaaatttctcgacagttaactgtcgagagggcaaaaacgtaaattact 4204307  T
Q  110 cgtgtgc 116  Q
    | |||||    
T  4204308 catgtgc 4204314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 39 - 146
Target Start/End: Complemental strand, 43094053 - 43093946
Alignment:
Q  39 ggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtggga 138  Q
    ||||||||||||||| || ||||||||   |||||||||||||||  ||||||  |||||||| | ||||||||||| |||  ||||||||||| ||  |    
T  43094053 ggcagttaactgcagccggatttctaaaatttcggcagttaactgttgaaggggtaaaaacgtcatttactcgtgtgacacagccttatcaaatatgtaa 43093954  T
Q  139 acaacaat 146  Q
    ||||||||    
T  43093953 acaacaat 43093946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 10 - 112
Target Start/End: Complemental strand, 33993354 - 33993252
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||| |||| | |||||||||||| ||| ||  |||  |||| |||||||||||||| |||| ||| ||||||||||  |||||    
T  33993354 ctcggcagttaactaccgaggtttttcacggcagttaactacagccggtttttgaatttttcggcagttaacttccgagggggcaaaaacgtattttact 33993255  T
Q  110 cgt 112  Q
    |||    
T  33993254 cgt 33993252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 42539375 - 42539477
Alignment:
Q  13 ggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgt 112  Q
    ||||||||||| || |  ||||||||||||||||||||||| ||||||| |||||  ||| |||||| || || ||||| ||||||||||  |||||| |    
T  42539375 ggcagttaactaccaaagttttcctcggcagttaactgcagccgaatttttaatttctcgacagttagctacctaaggggcaaaaacgtattttactcat 42539474  T
Q  113 gtg 115  Q
    |||    
T  42539475 gtg 42539477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Original strand, 11348494 - 11348551
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||||  || ||||||||  ||||||||||||||||||||    
T  11348494 attttcctcggcagttaactgcatccggatttctaaaacttcggcagttaactgccga 11348551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 42937264 - 42937131
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcg 111  Q
    ||||| |||||| |||||  |||| ||||||||||||||| | ||  ||||| |  |||||||||||||| ||||| |||| |||||||||  ||||| |    
T  42937264 cggcacttaactaccgaggatttcttcggcagttaactgccgccggttttcttaaacttcggcagttaaccgccgatgggataaaaacgtattttacttg 42937165  T
Q  112 tgtgccacgtccttatcaaatgtgggaacaacaa 145  Q
    |||||| |  ||||||  ||||||| ||||||||    
T  42937164 tgtgcctcagccttatgcaatgtggaaacaacaa 42937131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 13837800 - 13837716
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||||| ||||| ||||||||||||||||||||| | ||  || || ||  ||||||||||| ||||||||||||    
T  13837800 tcctcggcagttaactaccgaggttttcctcggcagttaactgccgccggtttactaaaaacttcggcagtttactgccgaaggg 13837716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 28387342 - 28387270
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    ||||||||||||| |||||  ||||||||||| |||||||||| || | ||| ||||| ||||||||||||||    
T  28387342 tcggcagttaactaccgaggatttcctcggcaattaactgcagccggaattcaaattcctcggcagttaactg 28387270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 83
Target Start/End: Original strand, 31788131 - 31788183
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    ||||||||||||||||||||||||| |||||||||  ||||| ||||||||||    
T  31788131 ttttcctcggcagttaactgcagtctaatttctaaaacttcgacagttaactg 31788183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 83
Target Start/End: Complemental strand, 34682330 - 34682258
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    |||| |||||||||||||| ||||||||||||||||||||||| ||  |||  ||||| ||| ||||||||||    
T  34682330 tcggtagttaactcccgaggttttcctcggcagttaactgcagccggtttttgaattcctcgacagttaactg 34682258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 39742651 - 39742575
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    ||||||| |||||||| | ||| ||||||||||||||||||||||||||  ||| |  ||| |||||||||||||||    
T  39742651 tcctcggtagttaactgctgaggttttcctcggcagttaactgcagtcggttttatttttcctcggcagttaactgc 39742575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 102
Target Start/End: Original strand, 3603148 - 3603239
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    ||||||||||||| ||||| |||||||||| |||||||||||| |   | |  |||||||||||||||||||| ||| ||  ||||||||||    
T  3603148 tcggcagttaactaccgaggttttcctcggaagttaactgcagccagttattgaattcttcggcagttaactgtcgagggagcaaaaacgta 3603239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 7800984 - 7801091
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||| |||||||||| ||||   ||||||||| | |||||||||| ||| |||  |||||  || ||||||||| ||||  ||||||||||||||||||    
T  7800984 tcctcagcagttaactaccgatgatttcctcggtaattaactgcagccgatttttgaattccacgacagttaactaccgagtggacaaaaacgtaaatta 7801083  T
Q  108 ctcgtgtg 115  Q
     |||||||    
T  7801084 ttcgtgtg 7801091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 11029001 - 11029044
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  11029001 tcctcggcagttaactcccgaggatttcctcggcagttaactgc 11029044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 11 - 89
Target Start/End: Original strand, 18512652 - 18512730
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt-ctaattcttcggcagttaactgccgaag 89  Q
    |||||||||| || | ||||||||||||||||||||||||||| ||  ||| ||||  ||||||||||||||||||||||    
T  18512652 tcggcagttagctgctgagattttcctcggcagttaactgcagccggttttactaa-acttcggcagttaactgccgaag 18512730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 28238215 - 28238172
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  28238215 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 28238172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 30192568 - 30192485
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||||| ||||  ||||||||| ||||||||||||| ||  | | |||   |||||||||||||||||||||||    
T  30192568 tcctcggcagttaactgccgaagttttcctcgacagttaactgcagccggttctttaaaatttcggcagttaactgccgaaggg 30192485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 82
Target Start/End: Complemental strand, 7017588 - 7017514
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaact 82  Q
    |||||||||||||||| ||||| ||||||| |  |||||||||||| || ||||| ||||| || ||||||||||    
T  7017588 tcctcggcagttaactaccgaggttttccttgagagttaactgcagccggatttcaaattcctcagcagttaact 7017514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 87
Target Start/End: Complemental strand, 13563717 - 13563664
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||| || ||| |  |||||||||||||||||||||||    
T  13563717 tcctcggcagttaactgcagccggattacatattcttcggcagttaactgccga 13563664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 48
Target Start/End: Complemental strand, 27660016 - 27659976
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaac 48  Q
    |||||||||||||||| ||||| ||||||||||||||||||    
T  27660016 tcctcggcagttaactaccgaggttttcctcggcagttaac 27659976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 4 - 87
Target Start/End: Complemental strand, 28880402 - 28880318
Alignment:
Q  4 aagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccga 87  Q
    |||||||||||||||||| | ||||| |||||||||||||||  |||||| || |||| | ||   |||||||||||||||||||    
T  28880402 aagatcctcggcagttaattaccgaggttttcctcggcagtttgctgcagccggatttttcaaaatttcggcagttaactgccga 28880318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Original strand, 29430575 - 29430651
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    ||||||| |||||||| ||||| |||||||| |||||||||||||| ||  ||| |  ||| |||||||||||||||    
T  29430575 tcctcggtagttaactgccgaggttttcctcagcagttaactgcagccggttttatttttcctcggcagttaactgc 29430651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 38408467 - 38408547
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||||||||| |||||    ||||||| |||||||||| ||||  |||||||  ||||||||||||| ||||||||||    
T  38408467 tcggcagttaactgccgaggaaatcctcgggagttaactgccgtcggttttctaaaacttcggcagttaattgccgaaggg 38408547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 42537215 - 42537139
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||||||| ||| |||||| |||  ||||||||||  | |  |||||||||||||| ||||||||||    
T  42537215 tcggcagttaactgccgatggggcaaaaatgtattttactcgtgtttctcagccttatcaaatgtgtgaacaacaat 42537139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 541002 - 540959
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| |||||| |||||||| |||||||||||    
T  541002 tcctcggcagttaactaccgagaatttcctcgacagttaactgc 540959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 70 - 117
Target Start/End: Complemental strand, 7796675 - 7796628
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgcc 117  Q
    ||||||| |||||||| | ||| |||||||||||||||||||||||||    
T  7796675 tcggcagataactgccaagggggcaaaaacgtaaattactcgtgtgcc 7796628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 8577050 - 8577007
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| ||||| |||||||||||||||    
T  8577050 tcctcggcagttaactaccgaggttttcttcggcagttaactgc 8577007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 14280897 - 14280940
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||| ||||||| ||||| |||||||||||||||||||||    
T  14280897 tcctcggccgttaactaccgaggttttcctcggcagttaactgc 14280940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 19035314 - 19035271
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  19035314 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 19035271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 55
Target Start/End: Original strand, 27532614 - 27532661
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtc 55  Q
    |||||||||||||||| ||||| |||||||||  ||||||||||||||    
T  27532614 tcctcggcagttaactgccgaggttttcctcgatagttaactgcagtc 27532661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 28876719 - 28876676
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||| ||||||||||    
T  28876719 tcctcggcagttaactgccgaggttttcctcgggagttaactgc 28876676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 30 - 77
Target Start/End: Original strand, 37820873 - 37820920
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagt 77  Q
    |||||||||||||||||||||||| || ||||| ||||| ||||||||    
T  37820873 attttcctcggcagttaactgcagccggatttcaaattcctcggcagt 37820920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 38408509 - 38408470
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  38408509 cggcagttaactcccgaggatttcctcggcagttaactgc 38408470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 38855708 - 38855751
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||    
T  38855708 tccttggcagttaactaccgaggttttcctcggcagttaactgc 38855751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 13838424 - 13838466
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||    
T  13838424 tcggcagttaactgccgaggttttcctcggtagttaactgcag 13838466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 146
Target Start/End: Original strand, 19228671 - 19228781
Alignment:
Q  36 ctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtg 135  Q
    |||||||||||||||||  ||  ||| |||||| |||||||||||||||||| ||| ||   |||||  ||||| ||||| | |  ||||||||||||||    
T  19228671 ctcggcagttaactgcatccggttttttaattcatcggcagttaactgccgagggggcatttacgtattttacttgtgtgtctcagccttatcaaatgtg 19228770  T
Q  136 ggaacaacaat 146  Q
      |||||||||    
T  19228771 tcaacaacaat 19228781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 33 - 87
Target Start/End: Original strand, 20744015 - 20744069
Alignment:
Q  33 ttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||||| ||| | | |||  ||||||||||||||||||||    
T  20744015 ttcctcggcagttaactgcagccgattctttaaaacttcggcagttaactgccga 20744069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 84
Target Start/End: Complemental strand, 29430096 - 29430022
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    ||||| |||||||| ||||| |||||||||||| |||||||||| ||  ||| |  ||| |||||||||||||||    
T  29430096 ctcggtagttaactgccgaggttttcctcggcacttaactgcagccggttttatttttcctcggcagttaactgc 29430022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 15 - 53
Target Start/End: Complemental strand, 41201797 - 41201759
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||| ||||| |||||||||||||||||||||||    
T  41201797 cagttaactaccgaggttttcctcggcagttaactgcag 41201759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 7021877 - 7021926
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagtta 79  Q
    |||||||||||||||||||||||| || ||||| ||||| || |||||||    
T  7021877 attttcctcggcagttaactgcagccggatttcaaattcctcagcagtta 7021926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 45
Target Start/End: Complemental strand, 31787596 - 31787559
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagtt 45  Q
    |||||||||||||||| ||||| |||||||||||||||    
T  31787596 tcctcggcagttaactaccgaggttttcctcggcagtt 31787559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 35671158 - 35671113
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| || |  |||||||||||||||||||||||    
T  35671158 tcctcggcagttaactgccaaagttttcctcggcagttaactgcag 35671113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 40789204 - 40789249
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| |  | ||||||||||||||||||||||||    
T  40789204 tcctcggcagttaactgctaaaattttcctcggcagttaactgcag 40789249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 41065958 - 41065881
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||| ||||| || ||||  |||||||||| |||||||||||||||| ||  || ||| ||||||||||||| ||||    
T  41065958 ctcgggagttacctgccgaagttttcctcggaagttaactgcagtcgatttcgtatttcctcggcagttaactaccga 41065881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 42098379 - 42098334
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||| |||||||  ||||| |||||||||||||||||||||||    
T  42098379 tcctcggtagttaaccgccgaggttttcctcggcagttaactgcag 42098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 30711156 - 30711236
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccga 87  Q
    ||||||| |||||| |  |||| ||||||||||||||||||||| | ||| || || ||  ||||||||||||||||||||    
T  30711156 tcctcggtagttaaatgtcgaggttttcctcggcagttaactgccgccgacttcctaaaaacttcggcagttaactgccga 30711236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 37814655 - 37814615
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||| || || |||||||||||||||||||||    
T  37814655 tcggcagttaactaccaaggttttcctcggcagttaactgc 37814615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 79; Significance: 1e-36; HSPs: 117)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 9711648 - 9711786
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||   || ||||||||||| ||||||||||||||| || ||| ||||| ||||  |||    
T  9711648 tcctcggcagttaactcccgaggttttcctcggcagttaactgcgaccggatttctaattcctcggcagttaactgctgatggggcaaaatcgtatttta 9711747  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || |||||||||  |||||||||||||||||||||||||    
T  9711748 ctagtgtgccacaaccttatcaaatgtgggaacaacaat 9711786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 29438020 - 29438155
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||| | ||||| |||||||||| |||||||||||| ||  ||| ||||  ||| ||||||||||||||| ||| ||||||||||||||| ||    
T  29438020 tcggcagttaattaccgaggttttcctcggtagttaactgcagccggttttttaatatttctgcagttaactgccgagggggcaaaaacgtaaattattc 29438119  T
Q  111 gtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||  |||||||||||||||||||||||||    
T  29438120 gtgtgccacaaccttatcaaatgtgggaacaacaat 29438155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 10 - 146
Target Start/End: Complemental strand, 44336323 - 44336191
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||| ||||    ||| ||||    
T  44336323 ctcggcagttaactaccgaggttttcctcggcagttaactgcagccgaatttctaattcctcgacagttaactgctgaagggaaaaaa----aaaatact 44336228  T
Q  110 cgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||| ||   |||||||||||||||||||||||||    
T  44336227 cgtgtgtcataaccttatcaaatgtgggaacaacaat 44336191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 51288939 - 51288832
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    ||||||| |||||||||||||| || ||||||||||| |||| ||||||||||||| ||| ||||||| ||||||| |||||||||||  ||||||||||    
T  51288939 tttcctccgcagttaactgcagccggatttctaattcctcggtagttaactgccgagggggcaaaaacataaattattcgtgtgccacagccttatcaaa 51288840  T
Q  132 tgtgggaa 139  Q
    ||||||||    
T  51288839 tgtgggaa 51288832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 6562158 - 6562296
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||||  |||||||||||||||||||||| || ||||| ||||| |||||||||||||||||| |||  |||| ||||  |||    
T  6562158 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 6562257  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||| |||  |||||||| ||||||||||| ||||    
T  6562258 ctagtgtggcacaaccttatcacatgtgggaacagcaat 6562296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 46886385 - 46886522
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| |||||||||||| |||||| ||| || ||||||||  |||||||||||||||||||| ||| ||||||||| | |||    
T  46886385 tcctcggcagttaactaccgag-ttttcctcggcacttaactacagccggatttctaaaacttcggcagttaactgccgagggggcaaaaacgtcattta 46886483  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||  |||  ||||||||||||||  |||||||||    
T  46886484 ctcgtgtagcacaaccttatcaaatgtgtaaacaacaat 46886522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 10 - 87
Target Start/End: Complemental strand, 6557989 - 6557912
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||    
T  6557989 ctcggcagttaactaccgagattttcctcggcagttaactgcagccgaatttcaaattcctcggcagttaactgccga 6557912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 19161968 - 19161888
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaa 88  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||  |||||||||||||||||||||    
T  19161968 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaa 19161888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 41804037 - 41804168
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgt 114  Q
    ||||||||| ||||| ||||||||||||||||||||||||||  |||  ||||| |||||||||||||||||||||| ||||| ||||  ||||| ||||    
T  41804037 cagttaactaccgaggttttcctcggcagttaactgcagtcggtttttgaattcctcggcagttaactgccgaaggggcaaaagcgtattttacttgtgt 41804136  T
Q  115 gccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||| |  |||||| |||||||  |||||||||    
T  41804137 gcctcagccttataaaatgtgtcaacaacaat 41804168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 44470008 - 44470087
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||    
T  44470008 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 44470087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 49924929 - 49924794
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||||||||   ||||||||||||||||||| || ||  |||  |||| |||||||||||| |||||||||| ||||||||||||||||||    
T  49924929 tcggcagttaactcccgatgatttcctcggcagttaactgtagccggtttttgaatttttcggcagttaattgccgaaggggcaaaaacgtaaattactc 49924830  T
Q  111 gtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||| |  ||||||  ||||||  |||||||||    
T  49924829 gtgtgcctcagccttatgcaatgtgtcaacaacaat 49924794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 11 - 114
Target Start/End: Complemental strand, 52802203 - 52802100
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||| ||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||  || |||||| ||||||||||     
T  52802203 tcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagagggcaaaaaagtaaattactt 52802104  T
Q  111 gtgt 114  Q
    ||||    
T  52802103 gtgt 52802100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 52805553 - 52805668
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    |||||||||||| |||||| ||| || ||||| ||||| |||||||||||||||||| ||| ||||||  ||||||||| |||||||||  |||||||||    
T  52805553 ttttcctcggcaattaactacagccggatttcaaattcgtcggcagttaactgccgagggggcaaaaaaataaattacttgtgtgccacaaccttatcaa 52805652  T
Q  131 atgtgggaacaacaat 146  Q
    ||||||||||| ||||    
T  52805653 atgtgggaacatcaat 52805668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 12 - 146
Target Start/End: Original strand, 51271592 - 51271726
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcg 111  Q
    |||||||||||  ||||| |||||||||||| |||||||||| || ||||||||  |||||||||||||||||||| ||| ||||||||| | |||| ||    
T  51271592 cggcagttaaccaccgaggttttcctcggcaattaactgcagccggatttctaaaacttcggcagttaactgccgagggggcaaaaacgtcatttacccg 51271691  T
Q  112 tgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||| |||  ||||||  ||| |||||||||||||    
T  51271692 tgtggcacaaccttatgtaatttgggaacaacaat 51271726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 8460096 - 8460202
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||||||||||| ||||||||||||||| || ||||| ||||| ||||  ||||||| |||| |||||||||||||| ||||||    
T  8460096 ctcggcagttaactaccgagattttccttggcagttaactgcagccg-atttcaaattcctcggttgttaactaccgaggggacaaaaacgtatattact 8460194  T
Q  110 cgtgtgcc 117  Q
    | ||||||    
T  8460195 catgtgcc 8460202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 29765549 - 29765664
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    ||||||||||||||||||||||  || ||||||||  |||||||||||||||||||| ||||||||||||| | ||| |||||||  ||  ||||||  |    
T  29765549 ttttcctcggcagttaactgcaaccggatttctaaaacttcggcagttaactgccgaggggacaaaaacgtcatttattcgtgtggtacaaccttatgca 29765648  T
Q  131 atgtgggaacaacaat 146  Q
    ||||||||||||||||    
T  29765649 atgtgggaacaacaat 29765664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 10 - 127
Target Start/End: Complemental strand, 22345334 - 22345218
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| |||||  |||  ||||||||||||||||| ||  |||| ||||| |||||||||||||||||| || | ||||||||||||||||    
T  22345334 ctcggcagttaactaccgaggattttttcggcagttaactgcagccgg-tttcaaattcctcggcagttaactgccgatggaataaaaacgtaaattact 22345236  T
Q  110 cgtgtgccacgtccttat 127  Q
    |||||||| || ||||||    
T  22345235 cgtgtgccccgaccttat 22345218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 14 - 146
Target Start/End: Original strand, 23276111 - 23276243
Alignment:
Q  14 gcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtg 113  Q
    ||||||||||  |||| |||||||||||||||||||| || || |||| |||||| || ||||||||||||||| ||| ||||||||||  |||||||||    
T  23276111 gcagttaactatcgaggttttcctcggcagttaactgtagccggatttttaattcctcagcagttaactgccgagggggcaaaaacgtattttactcgtg 23276210  T
Q  114 tgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |  | |  |||||||||||| | ||||||||||    
T  23276211 tttctcagccttatcaaatgcgtgaacaacaat 23276243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 27485113 - 27484997
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatca 129  Q
    ||||| |||||||||||||||||| || |||| |||||| | |||||||||||||||| ||| ||||||||||  ||||||||||  | |  ||||||||    
T  27485113 atttttctcggcagttaactgcagccggatttttaattcctaggcagttaactgccgagggggcaaaaacgtattttactcgtgtttctcagccttatca 27485014  T
Q  130 aatgtgggaacaacaat 146  Q
    |||||||||||| ||||    
T  27485013 aatgtgggaacagcaat 27484997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 31 - 146
Target Start/End: Complemental strand, 94462 - 94348
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    |||||||||| ||||||||||||  | ||||||||  |||||||||||||||||||||||| ||||||||| | |||||| |||| |||  |||||||||    
T  94462 ttttcctcggtagttaactgcagctggatttctaaaacttcggcagttaactgccgaaggg-caaaaacgtcatttactcatgtggcacagccttatcaa 94364  T
Q  131 atgtgggaacaacaat 146  Q
    |||||  |||||||||    
T  94363 atgtgtaaacaacaat 94348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 2425682 - 2425819
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||||||| ||||| |||||||||||||| || ||||| ||  ||||||||||||||||||| ||||  ||||  || | |||    
T  2425682 tcctcggcagttaactaccgagattctcctcagcagttaactgcagccggatttccaaaacttcggcagttaactgccg-aggggtaaaagggttattta 2425780  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||| ||||    |||||||||||||||||    
T  2425781 ctcgtgtgtcacggccttccgcaatgtgggaacaacaat 2425819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 5077993 - 5077879
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    ||||||||||||||||||||||||| ||||| ||||  || ||||||||||||||| |||  |||| ||||  ||||| ||||| |||  |||||||| |    
T  5077993 tttcctcggcagttaactgcagtcggatttcaaatttctcagcagttaactgccgagggggtaaaatcgtattttactggtgtggcacagccttatcaca 5077894  T
Q  132 tgtgggaacaacaat 146  Q
    |||||||||||||||    
T  5077893 tgtgggaacaacaat 5077879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 48751407 - 48751545
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| |||||||||||| |||||||||| || |||| |||||| ||||||||| | |||||| |||  |||| ||||  |||    
T  48751407 tcctcggcagttaactaccgaggttttcctcggcaattaactgcagccggatttttaattcctcggcagttcagtgccgagggggtaaaatcgtatttta 48751506  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||  | |  |||||||||||||||||||| ||||    
T  48751507 ctagtgtttctcagccttatcaaatgtgggaacatcaat 48751545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 49927512 - 49927616
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||| ||||||||| ||||| |||| ||||||||||||||  || ||  |||  |||||||||||||||||||||||| ||||||||||||||  |||||    
T  49927512 ctcgacagttaactaccgaggtttttctcggcagttaactatagccggtttttaaattcttcggcagttaactgccgaggggacaaaaacgtattttact 49927611  T
Q  110 cgtgt 114  Q
    |||||    
T  49927612 cgtgt 49927616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 586602 - 586685
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||    
T  586602 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaaggg 586685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 15047358 - 15047279
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| |||||   ||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||    
T  15047358 tcctcggcagttaactaccgaggaattcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 15047279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 21144625 - 21144739
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    |||||||||||| |||||||| | || | ||||||||| |  |||||||||||||||   | ||||||||||||||| ||||||||||   |||||||||    
T  21144625 ttttcctcggcacttaactgccgccggaattctaattccttcgcagttaactgccgagaag-caaaaacgtaaattagtcgtgtgccagaaccttatcaa 21144723  T
Q  131 atgtgggaacaacaat 146  Q
    ||||||||||||||||    
T  21144724 atgtgggaacaacaat 21144739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 27487663 - 27487771
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatg 133  Q
    |||||||||||||||||||| || | || |||||| || ||||    ||||||| ||  |||||||||||||||||||||||||||  ||||||||||||    
T  27487663 tcctcggcagttaactgcagccggaattttaattcctcagcag----ctgccgagggagcaaaaacgtaaattactcgtgtgccacaaccttatcaaatg 27487758  T
Q  134 tgggaacaacaat 146  Q
    |||||||| ||||    
T  27487759 tgggaacatcaat 27487771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 35 - 146
Target Start/End: Complemental strand, 30905820 - 30905709
Alignment:
Q  35 cctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgt 134  Q
    ||||||||||||||||||| || ||||| ||||  |||||||||||||||||| |||| |||| ||||  ||||| ||||| |||  |||||||| ||||    
T  30905820 cctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgaggggataaaatcgtattttactggtgtggcacagccttatcacatgt 30905721  T
Q  135 gggaacaacaat 146  Q
    ||||||| ||||    
T  30905720 gggaacagcaat 30905709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 11183261 - 11183124
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggga-caaaaacgtaaatta 107  Q
    ||||| ||||||||| ||||| ||||||||||||||||||||||| || |||| |||||| || ||||||||||| | |||||| ||||||||||  |||    
T  11183261 cctcgacagttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcagcagttaactgtc-aagggagcaaaaacgtatttta 11183163  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||| |  | |  ||||||||||||||  |||||||||    
T  11183162 ctcgtatttctcagccttatcaaatgtgtcaacaacaat 11183124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 44598903 - 44599041
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| || ||| ||||   |||| ||| ||||||||||  || |||||| || | |||    
T  44598903 tcctcggcagttaactcccgaagttttcctcggcagttaactgcagccggattactaaaatttcgacaggtaactgccgagagggcaaaaatgtcattta 44599002  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  || |||  |||||||| ||||||||    
T  44599003 ctcgtgtggcacaaccctatgtaatgtgggtacaacaat 44599041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 13636116 - 13636201
Alignment:
Q  5 agatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||| || |||| | ||   |||||||||||||||||||||    
T  13636116 agatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 13636201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 19159706 - 19159617
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| || |||| | ||   |||||||||||||||||||||    
T  19159706 cagaagatcctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttttcaaaatttcggcagttaactgccgaag 19159617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 8 - 97
Target Start/End: Original strand, 23359346 - 23359435
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaa 97  Q
    |||||||||||| ||| ||||| |||||||||| |||||||||||| || ||||| ||||| |||||| ||||||||||| ||| |||||    
T  23359346 tcctcggcagtttactaccgaggttttcctcggtagttaactgcagccggatttcaaattcctcggcaattaactgccgagggggcaaaa 23359435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 30194474 - 30194414
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||    
T  30194474 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaaggg 30194414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 9710654 - 9710596
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaat 66  Q
    |||||||||||||||||||||  ||||||||||||||||||||||| || |||||||||    
T  9710654 tcctcggcagttaactcccgaagttttcctcggcagttaactgcagccggatttctaat 9710596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 18609892 - 18610029
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||  |||||||||| |||||||||| | ||  || ||||  |||||||||||||||||| ||||| |||  | ||||| ||    
T  18609892 tcctcggcagttaactgccgaagttttcctcggtagttaactgccgccggtttactaaaacttcggcagttaactgccaaaggg-caattaggtaaaata 18609990  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
     ||||||| |||  ||||||||||||||  |||||||||    
T  18609991 ttcgtgtgacacagccttatcaaatgtgtaaacaacaat 18610029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 40 - 146
Target Start/End: Complemental strand, 44596905 - 44596799
Alignment:
Q  40 gcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaa 139  Q
    |||||||||||||  || ||||||||  ||||||||||||||||||||  || ||||||||| | ||||||||||| |||   |||||  ||||||||||    
T  44596905 gcagttaactgcaaccggatttctaaaacttcggcagttaactgccgagcgggcaaaaacgtcatttactcgtgtggcacagtcttatgtaatgtgggaa 44596806  T
Q  140 caacaat 146  Q
    |||||||    
T  44596805 caacaat 44596799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 13972145 - 13972046
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||| ||| | | ||||| ||||||||||| ||||||||||| | | ||| |||||| ||||||| |||||||||||||| ||||||||    
T  13972145 cagaagatcctcggctgtttaataccgaggttttcctcggctgttaactgcag-ccagtttttaattcctcggcag-taactgccgaaggggcaaaaacg 13972048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 49426763 - 49426663
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatg 133  Q
    |||||||||||||| ||||| || ||||||||  ||||||| ||||||||||||||||| ||| |||| | |||||||||||  ||  ||||||||||||    
T  49426763 tcctcggcagttaattgcagccggatttctaaaacttcggcggttaactgccgaaggga-aaacacgtcatttactcgtgtggtacagccttatcaaatg 49426665  T
Q  134 tg 135  Q
    ||    
T  49426664 tg 49426663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 30 - 146
Target Start/End: Complemental strand, 44465650 - 44465534
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatca 129  Q
    ||||||||||||||| |||||||| || | ||| ||||| |||| ||||||||||||| |||  |||| ||||  ||||| || || |||  ||||||||    
T  44465650 attttcctcggcagtaaactgcagccggaattcaaattcctcggtagttaactgccgagggggtaaaatcgtattttactagtatggcacaaccttatca 44465551  T
Q  130 aatgtgggaacaacaat 146  Q
     ||||||||||||||||    
T  44465550 catgtgggaacaacaat 44465534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 4883309 - 4883234
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||||||||||||||||    
T  4883309 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactg 4883234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 35258870 - 35258949
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaa 88  Q
    ||||||||||||||   |||| ||||||||||  ||||||||||| || |||| |||||| |||||||||||||||||||    
T  35258870 cctcggcagttaaccatcgaggttttcctcgggtgttaactgcagccggatttttaattcctcggcagttaactgccgaa 35258949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 38771705 - 38771662
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  38771705 tcctcggcagttaactcccgaggttttcctcggcagttaactgc 38771662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 19521685 - 19521563
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||||||| |||| ||||| ||||||||| || |||||||||||        |||  |||||| ||| |  ||||||||||||    
T  19521685 tcctcggcagttaactaccgagattatccttggcaggtaactgcagccggatttctaattc-------cttagttgccgagggggc--aaacgtaaatta 19521595  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaa 139  Q
    | ||||||||||  ||||||||||||||||||    
T  19521594 cccgtgtgccacagccttatcaaatgtgggaa 19521563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 23913909 - 23913795
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    ||||||| |||||||||||||| || | ||| ||||| |||| |||||||||| || |||  |||| ||||  ||||| ||||| |||  |||||||| |    
T  23913909 tttcctcagcagttaactgcagccggaattcaaattcctcggtagttaactgctgagggggtaaaatcgtattttactagtgtggcacaaccttatcaca 23913810  T
Q  132 tgtgggaacaacaat 146  Q
    |||||||||||||||    
T  23913809 tgtgggaacaacaat 23913795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 31783712 - 31783794
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagg 90  Q
    |||||||||||||||||||||| ||||||||||||||||||| | | | | || ||||  ||||| |||||||||| ||||||    
T  31783712 tcctcggcagttaactcccgaggttttcctcggcagttaactaccgccaatttactaaaacttcgacagttaactgtcgaagg 31783794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 32161349 - 32161427
Alignment:
Q  68 cttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||| |||||||||||| |||| ||||||||| | ||||||||||| |||  ||||||  |||||||||||||||||    
T  32161349 cttcggtagttaactgccgcaggggcaaaaacgtcatttactcgtgtggcacagccttatgtaatgtgggaacaacaat 32161427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 471095 - 471136
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||||||| |||||||||||||||||||||    
T  471095 ctcggcagttaactcccgaggttttcctcggcagttaactgc 471136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 14 - 51
Target Start/End: Complemental strand, 11197466 - 11197429
Alignment:
Q  14 gcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||||||||||||||||||||||||||||    
T  11197466 gcagttaactcccgagattttcctcggcagttaactgc 11197429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 20349511 - 20349454
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||||| || ||||| ||||| |||| |||||||||||||    
T  20349511 attttcctcggcagttaactgcagccggatttcaaattcctcggtagttaactgccga 20349454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 26633600 - 26633468
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||| ||||||||||||||||||||||  ||  |||  |||||||||| ||||||   |||| ||| ||||| ||||  |||||     
T  26633600 tcggcagttaactaccgaggttttcctcggcagttaactgcaaccggtttttgaattcttcggtagttaa---ccgagggggcaaaagcgtattttactt 26633504  T
Q  111 gtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||| |  |||||| |||||||  |||||||||    
T  26633503 gtgtgcctcaaccttatgaaatgtgtcaacaacaat 26633468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 65 - 146
Target Start/End: Complemental strand, 37014969 - 37014888
Alignment:
Q  65 attcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||| |||||||||||||| ||| ||| ||||| ||||  ||||| |||||||||  | |||||||||||||||||||||||    
T  37014969 attcctcggcagttaactgtcgagggggcaaaatcgtattttactagtgtgccacaacattatcaaatgtgggaacaacaat 37014888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 41453892 - 41453835
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||||| || ||||| ||||| ||||||||||||| ||||    
T  41453892 attttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactaccga 41453835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 8459037 - 8458954
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    ||||||||||||||||||||||||||  |||| |||||  |||||||||||| | || |||| |||||||||  |||||||||||    
T  8459037 ttttcctcggcagttaactgcagtcg-gtttcaaattccacggcagttaacttctgaggggataaaaacgtattttactcgtgtg 8458954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 19914519 - 19914463
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||||||| || ||||||||  |||||| |||||||||||||    
T  19914519 ttttcctcggcagttaactgcagccgtatttctaaaacttcggaagttaactgccga 19914463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 38 - 146
Target Start/End: Complemental strand, 23272895 - 23272787
Alignment:
Q  38 cggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtggg 137  Q
    ||||||||||||||||  | || | |||||| |||||||||||||| ||| |||| |||||||||  |||||||| |  | | ||||||||||||||  |    
T  23272895 cggcagttaactgcagctggatatttaattcctcggcagttaactggcgaggggaaaaaaacgtattttactcgtatttctcatccttatcaaatgtatg 23272796  T
Q  138 aacaacaat 146  Q
    |||||||||    
T  23272795 aacaacaat 23272787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 30910023 - 30910079
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||||||| || ||||| ||||| ||| ||||||||||||||    
T  30910023 ttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccga 30910079  T

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Target: chr1; HSP #59
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 35 - 135
Target Start/End: Complemental strand, 36908627 - 36908527
Alignment:
Q  35 cctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgt 134  Q
    ||||||||||||||||||| ||  |||  ||||||||| |||||||||||||| | | |||||| |||  ||||| ||||||| | ||||||| ||||||    
T  36908627 cctcggcagttaactgcagccggtttttgaattcttcgacagttaactgccgaggaggcaaaaatgtattttacttgtgtgcctcatccttataaaatgt 36908528  T
Q  135 g 135  Q
    |    
T  36908527 g 36908527  T

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Target: chr1; HSP #60
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 46141855 - 46141779
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||| ||||  ||||||||||||||||||||||| ||  | |  ||||| ||||||||||||||||||    
T  46141855 tcggcagttaactaccgatgttttcctcggcagttaactgcagccggttattgaattcctcggcagttaactgccga 46141779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 88
Target Start/End: Original strand, 46217315 - 46217395
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaa 88  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||| ||| ||| | |  |||||||| ||||||||||||    
T  46217315 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccgattttttcaaacttcggcaattaactgccgaa 46217395  T

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Target: chr1; HSP #62
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 51289960 - 51290036
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| ||||| ||||| ||||||||||||||||||||||  || |||| |||||| || | |||||||||||||    
T  51289960 tcggcagctaactaccgaggttttcctcggcagttaactgcaaccggatttttaattcctcagtagttaactgccga 51290036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 3728811 - 3728768
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  3728811 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 3728768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 3944050 - 3944007
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  3944050 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 3944007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 3993840 - 3993883
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  3993840 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 3993883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 8548666 - 8548709
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  8548666 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 8548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 75 - 146
Target Start/End: Complemental strand, 26944488 - 26944417
Alignment:
Q  75 agttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||| |||| ||||||||| | ||||||||||| |||  ||||||  |||||||||||||||||    
T  26944488 agttaactgccgtaggggcaaaaacgtcatttactcgtgtggcacagccttatgtaatgtgggaacaacaat 26944417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 29424456 - 29424373
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||| ||  ||| | |  |||||||| |||||||||||||||    
T  29424456 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttttttaaacttcggcaattaactgccgaaggg 29424373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 29425333 - 29425416
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||  ||| ||| | |  ||||| ||||||||||||||||||    
T  29425333 tcctcggcagttaactaccgaagttttcctcggtagttaactgcaaccgattttttcaaacttcgacagttaactgccgaaggg 29425416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 30 - 89
Target Start/End: Original strand, 49429154 - 49429213
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaag 89  Q
    |||||||||||||  ||||||||| || ||||||||  ||||||||||||||||||||||    
T  49429154 attttcctcggcaactaactgcagccggatttctaaaacttcggcagttaactgccgaag 49429213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 85
Target Start/End: Complemental strand, 50113381 - 50113306
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgcc 85  Q
    |||||||||||||| |||||||||||||||||| |||||| ||| |||| ||| ||||| ||  || |||||||||    
T  50113381 ctcggcagttaactaccgagattttcctcggcaattaactacagccgaaattcaaattcctcaccaattaactgcc 50113306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 50117843 - 50117886
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||| |||||| |||||||||||||||||||||||||||    
T  50117843 tcctcggcatttaactaccgagattttcctcggcagttaactgc 50117886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 68
Target Start/End: Complemental strand, 50617281 - 50617219
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcg--aatttctaattc 68  Q
    |||||||||||||||||||||| ||||||| | ||||||||||||| ||  ||||||||||||    
T  50617281 tcctcggcagttaactcccgaggttttccttgacagttaactgcagccggaaatttctaattc 50617219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 117
Target Start/End: Original strand, 6437539 - 6437645
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||| ||||| ||||| ||||||| || |||||||||||||||| | |  | ||| ||||||||||||||||||  || ||||| ||||  |||||     
T  6437539 tcggcagataactaccgaggttttccttggtagttaactgcagtcgattattgacttcctcggcagttaactgccgagagggcaaaagcgtattttactt 6437638  T
Q  111 gtgtgcc 117  Q
    |||||||    
T  6437639 gtgtgcc 6437645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 10 - 112
Target Start/End: Original strand, 13178131 - 13178233
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    ||||||||||||||| |||| |||||||| ||||||||||||||  |  |||  ||||  || ||||||||||||||| ||  ||||||||||  |||||    
T  13178131 ctcggcagttaactctcgaggttttcctcagcagttaactgcagctggtttttaaatttctcagcagttaactgccgagggagcaaaaacgtattttact 13178230  T
Q  110 cgt 112  Q
    |||    
T  13178231 cgt 13178233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 20114621 - 20114543
Alignment:
Q  68 cttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||| |||||||| ||| |||| ||||||||| | ||||||||||| |||  ||||||  |||||||||||||||||    
T  20114621 cttcggtagttaactaccgcaggggcaaaaacgtcatttactcgtgtggcacagccttatgtaatgtgggaacaacaat 20114543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 36072442 - 36072400
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||| |||||||||||||||||||||||    
T  36072442 tcggcagttaactaccgaggttttcctcggcagttaactgcag 36072400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 10 - 135
Target Start/End: Complemental strand, 22524200 - 22524076
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||| |||||||||| |||||||||| | ||  || ||||  |||||||| ||||||| || |||| ||   | ||||||||||    
T  22524200 ctcggcagttaactaccgaggttttcctcgggagttaactgccgccggtttactaaaacttcggcacttaactgtcg-aggggcatttaggtaaattact 22524102  T
Q  110 cgtgtgccacgtccttatcaaatgtg 135  Q
    |||||| |||  |||||| |||||||    
T  22524101 cgtgtggcacaaccttatgaaatgtg 22524076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 38690007 - 38689962
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||||    
T  38690007 tcctcggcagttaactaccgaggttttccttggcagttaactgcag 38689962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 41909702 - 41909747
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| |||| |||||||||| |||||||||||||    
T  41909702 tcctcggcagttaactgccgaaattttcctcgccagttaactgcag 41909747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 46973277 - 46973173
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    ||||||||||||||   ||| ||||||||||||||||||||||| ||  |||  ||||| |||||||||||||||| | ||| ||||| ||||  |||||    
T  46973277 ctcggcagttaactat-gaggttttcctcggcagttaactgcagccggtttttgaattcctcggcagttaactgccaagggggcaaaatcgtattttact 46973179  T
Q  110 cgtgtg 115  Q
     |||||    
T  46973178 tgtgtg 46973173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 37 - 90
Target Start/End: Original strand, 48228328 - 48228381
Alignment:
Q  37 tcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagg 90  Q
    ||||||||||||||||| |  ||||||||  |||||||||||||||||||||||    
T  48228328 tcggcagttaactgcagccagatttctaaaacttcggcagttaactgccgaagg 48228381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 471122 - 471198
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||||||| ||| ||||||||| | |||| || ||| |||  ||||||  |||||||||||||||||    
T  471122 tcggcagttaactgccgatggggcaaaaacgtcatttacccgcgtggcacaaccttatgtaatgtgggaacaacaat 471198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 10 - 78
Target Start/End: Original strand, 7981138 - 7981206
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagtt 78  Q
    |||||| ||||||| ||||| ||||||||||||||||| ||||| ||| ||| |||||  |||||||||    
T  7981138 ctcggcggttaactaccgaggttttcctcggcagttaattgcagccgattttttaatttctcggcagtt 7981206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 15549936 - 15549860
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    ||||||| |||||||  ||||| |||||||| |||||||||||||| | | ||| |  |||||||||||||||||||    
T  15549936 tcctcggtagttaacagccgaggttttcctctgcagttaactgcagcctattttatctttcttcggcagttaactgc 15549860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 117
Target Start/End: Original strand, 22346037 - 22346119
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgcc 117  Q
    ||||||||||||||||||||||| ||  |||| ||||| |||||||||   |||||| |||| || ||||||||||||| |||||||    
T  22346037 ttttcctcggcagttaactgcagccg-gtttcaaattcctcggcagtt---tgccgaggggaaaagaacgtaaattacttgtgtgcc 22346119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 51666659 - 51666742
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    |||||||| |||||||||||||| ||| |||| ||||  |||||| ||||||||||| ||| ||||| ||||  |||||||||||    
T  51666659 ttttcctcagcagttaactgcagccga-tttcgaattactcggcatttaactgccgagggggcaaaagcgtattttactcgtgtg 51666742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13147579 - 13147524
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcg 56  Q
    ||||||||| ||| |||||||||  |||| |||||||||| |||||||||||||||    
T  13147579 cagaagatcatcgacagttaactgtcgaggttttcctcggtagttaactgcagtcg 13147524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 51
Target Start/End: Original strand, 15051349 - 15051388
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||| ||||| |||||||||||||||||||||    
T  15051349 cggcagttaactaccgaggttttcctcggcagttaactgc 15051388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 19054249 - 19054292
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||| ||||| ||||||| |||||||||||||||    
T  19054249 ctcggcagttaactaccgaggttttccttggcagttaactgcag 19054292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 20353932 - 20353975
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||  |||||||||||||||||||||    
T  20353932 tcctcggcagttaactaccgaagttttcctcggcagttaactgc 20353975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 26879292 - 26879335
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||    
T  26879292 tccttggcagttaactaccgaggttttcctcggcagttaactgc 26879335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 29622421 - 29622464
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  29622421 tcctcggcagttaactaccgaggttttcctcggcaattaactgc 29622464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #94
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 49
Target Start/End: Complemental strand, 13633942 - 13633904
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaact 49  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  13633942 tcggcagttaactaccgaggttttcctcggcagttaact 13633904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #95
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 16270025 - 16270067
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||| ||||| |||||||||||||||||    
T  16270025 tcggcagttaactgccgaggttttcttcggcagttaactgcag 16270067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #96
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 3 - 45
Target Start/End: Complemental strand, 18974138 - 18974096
Alignment:
Q  3 gaagatcctcggcagttaactcccgagattttcctcggcagtt 45  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||    
T  18974138 gaagatcctcgacagttaactaccgagattttcctcgacagtt 18974096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #97
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 14 - 115
Target Start/End: Original strand, 19499115 - 19499214
Alignment:
Q  14 gcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtg 113  Q
    |||||||||  | ||| ||||||||||||||||||||||| |||||||  ||||  || ||||||||||| |||  || ||||||||||  ||||| |||    
T  19499115 gcagttaacgactgaggttttcctcggcagttaactgcagccgaattttaaatttctcagcagttaactgtcga--gggcaaaaacgtattttacttgtg 19499212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #98
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Complemental strand, 46319766 - 46319688
Alignment:
Q  68 cttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||| |||||||| ||| ||| |||||||||| | ||||||||||| |||  || |||  |||||||||||||||||    
T  46319766 cttcggtagttaactaccgcaggaacaaaaacgtcatttactcgtgtggcacagccatatgtaatgtgggaacaacaat 46319688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #99
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 68 - 146
Target Start/End: Original strand, 46320510 - 46320588
Alignment:
Q  68 cttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||| |||||||| ||| |||| ||||||||| | ||||||||||| |||  ||||||  |||||||||||| ||||    
T  46320510 cttcggtagttaactaccgcaggggcaaaaacgtcatttactcgtgtggcacaaccttatgtaatgtgggaacagcaat 46320588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #100
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 47586237 - 47586283
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcga 57  Q
    ||||||||||||| ||||| |||| ||||| ||||||||||||||||    
T  47586237 tcggcagttaactgccgaggtttttctcggtagttaactgcagtcga 47586283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #101
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 1656086 - 1656131
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| ||||| |||| |||| |||||||||||||    
T  1656086 tcctcggcagttaactaccgaggtttttctcgacagttaactgcag 1656131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #102
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 3941147 - 3941192
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| ||||  |||||||||| ||||||||||||    
T  3941147 tcctcggcagttaactaccgaagttttcctcggtagttaactgcag 3941192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #103
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 26770550 - 26770595
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| || | ||||||||||| ||||||||||||    
T  26770550 tcctcggcagttaactgccaaaattttcctcggtagttaactgcag 26770595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #104
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 85
Target Start/End: Complemental strand, 27114118 - 27114041
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgcc 85  Q
    ||||| |||||||||| |||| ||||||| |||||||| |||  || ||  ||| |||||| ||||||||||||||||    
T  27114118 tcctcagcagttaactgccgaaattttccacggcagtttactatagccgtgtttttaattcatcggcagttaactgcc 27114041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #105
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 88
Target Start/End: Complemental strand, 29352312 - 29352255
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaa 88  Q
    |||||||||||||||||||| || || ||||| ||||| ||| || ||||||||||||    
T  29352312 ttttcctcggcagttaactggagccggatttcaaattcctcgacaattaactgccgaa 29352255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #106
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 36076557 - 36076638
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||| |||  |||| ||||||||||||||||||||||| ||  |||  ||||| ||||  ||||||| ||||||||    
T  36076557 ctcggcagtttactagcgaggttttcctcggcagttaactgcagccggtttttgaattcctcggtggttaactaccgaaggg 36076638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #107
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 51
Target Start/End: Original strand, 38119614 - 38119651
Alignment:
Q  14 gcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||| ||||| |||||||||||||||||||||    
T  38119614 gcagttaactaccgaggttttcctcggcagttaactgc 38119651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #108
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 47653704 - 47653780
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| ||  ||| |||   |||||||||||||||||||    
T  47653704 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccggttttataa---ttcggcagttaactgccga 47653780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #109
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 6434831 - 6434755
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagt 77  Q
    ||||||||||| ||||||||||| ||||  |||||||  |||| ||||||||| ||| ||| |||||| ||| ||||    
T  6434831 cagaagatccttggcagttaactaccgaagttttccttagcagataactgcagccgattttttaattcatcgacagt 6434755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #110
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 114
Target Start/End: Complemental strand, 19054101 - 19054029
Alignment:
Q  42 agttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgt 114  Q
    |||||||||||| ||  |||  ||||| |||||||||||||| ||| ||| ||||||||||  ||||||||||    
T  19054101 agttaactgcagccggtttttgaattcctcggcagttaactgtcgagggggcaaaaacgtattttactcgtgt 19054029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #111
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 15 - 135
Target Start/End: Original strand, 25040080 - 25040200
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgt 114  Q
    ||||||||| || || ||||||||| || ||||||| || ||  |||  ||||  ||| ||||||||||||||||||||||||  |||  ||||| ||||    
T  25040080 cagttaactaccaaggttttcctcgacaattaactgaagccggttttaaaatttctcgacagttaactgccgaagggacaaaattgtattttacttgtgt 25040179  T
Q  115 gccacgtccttatcaaatgtg 135  Q
    ||| || | |||| |||||||    
T  25040180 gcctcggctttatgaaatgtg 25040200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #112
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 30 - 78
Target Start/End: Original strand, 29356684 - 29356732
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagtt 78  Q
    ||||||||||||||||||||||||  | ||||| ||||| |||||||||    
T  29356684 attttcctcggcagttaactgcagctggatttcaaattcctcggcagtt 29356732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #113
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 7 - 143
Target Start/End: Complemental strand, 29435050 - 29434914
Alignment:
Q  7 atcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatt 106  Q
    |||||| |||||||||| ||||| || || |||| |||||||||||||||  | |  |||||||||  ||||||||||| |  ||  |||||||||  ||    
T  29435050 atcctctgcagttaactaccgaggttgtcatcggaagttaactgcagtcggttattgaattcttcgaaagttaactgccaagagggtaaaaacgtatttt 29434951  T
Q  107 actcgtgtgccacgtccttatcaaatgtgggaacaac 143  Q
    | ||||||| | |   ||||| |||||||||||||||    
T  29434950 attcgtgtgtctcagtcttattaaatgtgggaacaac 29434914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #114
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 35 - 87
Target Start/End: Original strand, 49857873 - 49857925
Alignment:
Q  35 cctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||  || |||  ||||| ||||||||||||||||||    
T  49857873 cctcggcagttaactgcagctgatttttaaattcatcggcagttaactgccga 49857925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #115
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 44
Target Start/End: Original strand, 50117774 - 50117810
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagt 44  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  50117774 tcctcggcatttaactaccgagattttcctcggcagt 50117810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #116
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 50117872 - 50117948
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||||||| |  ||||||| || | ||||||||||| |||  ||||||  |||||||||||| ||||    
T  50117872 tcggcagttaactgccgaggaaacaaaaatgtcatttactcgtgtggcacaaccttatgtaatgtgggaacagcaat 50117948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #117
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 82 - 146
Target Start/End: Complemental strand, 50617191 - 50617127
Alignment:
Q  82 tgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| | | |||| |||||||||||||||||||   |||||| |||| |||||||||||||    
T  50617191 tgccgaagaggcgaaaaagtaaattactcgtgtgccaaagccttattaaatatgggaacaacaat 50617127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 146
Target Start/End: Original strand, 18292 - 18428
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||| ||||| ||| |||| ||||||||||| ||||||||  |||||||||||||| ||||||||||||||||||| |||||||    
T  18292 ctcggcagttaactaccgaggttttcttcgacagtaaactgcagtcggatttctaaaacttcggcagttaaccgccgaagggacaaaaacgtcaattact 18391  T
Q  110 cgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
     ||||||||| |||||||  || ||||||||||||||    
T  18392 tgtgtgccacatccttatgcaacgtgggaacaacaat 18428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 16 - 146
Target Start/End: Complemental strand, 18099 - 17969
Alignment:
Q  16 agttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    ||||||||||||||  ||| |||||||||||||||||| ||  |||||||||| |||||||||||||| ||| ||| |||||||||||||||||||||||    
T  18099 agttaactcccgaggatttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtg 18000  T
Q  116 ccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||  | |||||||||||||||||| ||||    
T  17999 ccacaactttatcaaatgtgggaacatcaat 17969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 77; Significance: 2e-35; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 10 - 146
Target Start/End: Complemental strand, 54552 - 54416
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||| ||||| ||| |||| ||||||||||| ||||||||  |||||||||||||| ||||||||||||||||||| |||||||    
T  54552 ctcggcagttaactaccgaggttttcttcgacagtaaactgcagtcggatttctaaaacttcggcagttaaccgccgaagggacaaaaacgtcaattact 54453  T
Q  110 cgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
     ||||||||| |||||||  || ||||||||||||||    
T  54452 tgtgtgccacatccttatgcaacgtgggaacaacaat 54416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 54745 - 54875
Alignment:
Q  16 agttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    ||||||||||||||  ||| |||||||||||||||||| ||  |||||||||| |||||||||||||| ||| ||| |||||||||||||||||||||||    
T  54745 agttaactcccgaggatttactcggcagttaactgcagccgggtttctaattcctcggcagttaactgtcgagggggcaaaaacgtaaattactcgtgtg 54844  T
Q  116 ccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||  | |||||||||||||||||| ||||    
T  54845 ccacaactttatcaaatgtgggaacatcaat 54875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 77; Significance: 2e-35; HSPs: 92)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 41276879 - 41276995
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatca 129  Q
    ||||| |||||||||||||||||| |||||||||||||| ||  |||||||||||||| ||| |||||| ||||||||||||||||| || |||||||||    
T  41276879 atttttctcggcagttaactgcagccgaatttctaattcctcaacagttaactgccgagggggcaaaaaagtaaattactcgtgtgcaacatccttatca 41276978  T
Q  130 aatgtgggaacaacaat 146  Q
    |||||||||||||||||    
T  41276979 aatgtgggaacaacaat 41276995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 3641719 - 3641584
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||| ||||||| |||||||| |||||||||||||| |||| ||||||||| || | | ||||||| ||| ||| ||||||||||||||||||    
T  3641719 tcggcagttaattcccgaggttttcctcagcagttaactgcagccgaagttctaattcatcagtaattaactgtcgagggggcaaaaacgtaaattactc 3641620  T
Q  111 gtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||||   |||||||||||||||||||| ||||    
T  3641619 gtgtgccatagccttatcaaatgtgggaacatcaat 3641584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 22550862 - 22550999
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||  |||||||||||||||||||||||| ||   | ||||||||    
T  22550862 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaaggg-catttaggtaaatta 22550960  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  ||||||||||||||  |||||||||    
T  22550961 ctcgtgtggcacagccttatcaaatgtgtaaacaacaat 22550999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 26451563 - 26451424
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||||||||| || |||||||||| |      | ||||||      
T  26451563 cagaagatcctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttctaattcctcagcagttaactac------ggcaaaaaaa 26451470  T
Q  101 taaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||    
T  26451469 taaattactcgtgtgccacaaccttatcaaatgtgggaagaacaat 26451424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 41250069 - 41250206
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||   |||| |||||||||||||| ||||||||||| ||||||||  ||||| ||||||||| ||| |||| ||||||||| |||||    
T  41250069 tcctcggcagttaaccatcgaggttttcctcggcagtaaactgcagtcggatttctaaaacttcgacagttaactaccg-aggggcaaaaacgtcaatta 41250167  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||||||||  ||||||  |||||||||||||||||    
T  41250168 ctcgtgtgccacaaccttatgcaatgtgggaacaacaat 41250206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 9 - 146
Target Start/End: Complemental strand, 1114818 - 1114681
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattac 108  Q
    ||||||||||||||| |||||  |||||||||||||||||||||| || ||||| ||||  |||||||||||||||||| |||  |||| ||||  ||||    
T  1114818 cctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaatttctcggcagttaactgccgagggggtaaaatcgtattttac 1114719  T
Q  109 tcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    | ||||| |||  |||||||| ||||||||||||||||    
T  1114718 tggtgtggcacagccttatcacatgtgggaacaacaat 1114681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 8 - 139
Target Start/End: Complemental strand, 39601780 - 39601649
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||  |||||||||||||||| |||   |  |||||||| | |||    
T  39601780 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgtcgagaaggtaaaaacgtcattta 39601681  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaa 139  Q
    |||||||| |||  ||||||  ||||||||||    
T  39601680 ctcgtgtggcacagccttatgtaatgtgggaa 39601649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 42602543 - 42602430
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||  ||  |||  ||||||||||||||||||||||||  | ||||||| |    
T  42602543 cagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcatccggtttttgaattcttcggcagttaactgccgatagaacaaaaatg 42602444  T
Q  101 taaattactcgtgt 114  Q
    ||  ||||||||||    
T  42602443 tattttactcgtgt 42602430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41858113 - 41858224
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||| ||||||||||||||| ||  ||||||||||||||||||| ||  |||  ||||||||| |||||||||||||| ||| ||||||||    
T  41858113 cagaagatcctcgacagttaactcccgaggtt--cctcggcagttaactgcagccggtttttgaattcttcgccagttaactgccgagggggcaaaaacg 41858210  T
Q  101 taaattactcgtgt 114  Q
    ||  ||||||||||    
T  41858211 tattttactcgtgt 41858224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 16 - 146
Target Start/End: Original strand, 44052231 - 44052361
Alignment:
Q  16 agttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    |||||||| ||||| |||||||||| || ||||||||| || ||| | ||||| |||||| |||||| |||| ||| ||||||||| | |||||||||||    
T  44052231 agttaactaccgaggttttcctcggtaggtaactgcagccggattgcaaattcctcggcaattaactaccgagggggcaaaaacgtcatttactcgtgtg 44052330  T
Q  116 ccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||  ||||||  |||||||||||||||||    
T  44052331 ccacaaccttatgtaatgtgggaacaacaat 44052361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 34823014 - 34823151
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattac 108  Q
    ||||||||||||||| ||||| ||||||||| || |||||||||| || |||| |||||| ||| ||||||||||||||  ||||||||||||| |||||    
T  34823014 cctcggcagttaactaccgaggttttcctcgacaattaactgcagccgtatttttaattcctcgacagttaactgccgagaggacaaaaacgtatattac 34823113  T
Q  109 tcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
      ||||||| |  ||||||  ||||||  |||||||||    
T  34823114 gtgtgtgcctcaaccttatacaatgtgtcaacaacaat 34823151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 33 - 146
Target Start/End: Complemental strand, 45454457 - 45454344
Alignment:
Q  33 ttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaat 132  Q
    ||||||||||||||||||||  || ||||| ||||| |||||||||||||||||| | | ||||| ||||  ||||| |||||||||   ||||||||||    
T  45454457 ttcctcggcagttaactgcatccggatttcaaattcctcggcagttaactgccgaggaggcaaaatcgtattttactagtgtgccacagtcttatcaaat 45454358  T
Q  133 gtgggaacaacaat 146  Q
    ||||||||||||||    
T  45454357 gtgggaacaacaat 45454344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 546418 - 546524
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||| |||||||||||||||| ||||||||||||||||||   || |||||||||||  ||||||||||||| || ||||||| ||||||||| | |||    
T  546418 tcctcagcagttaactcccgaggttttcctcggcagttaacaatagccgaatttctaaaacttcggcagttaattgtcgaaggg-caaaaacgtcattta 546516  T
Q  108 ctcgtgtg 115  Q
    ||||||||    
T  546517 ctcgtgtg 546524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 11 - 146
Target Start/End: Original strand, 2146957 - 2147091
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||| ||  |||| |||||  |||||||||||||| || |||| ||||||| |||||||||    
T  2146957 tcggcagttaactaccgaggttttcctcggcagtttactgcagccgg-tttcaaattccccggcagttaactgctgaggggaaaaaaacgaaaattactc 2147055  T
Q  111 gtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||| |  ||||||  ||||||  |||||||||    
T  2147056 gtgtgcctcaaccttatacaatgtgtcaacaacaat 2147091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 35962383 - 35962304
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||| |||||||||||||||||||| || || ||||| ||||| ||| ||||||||||||||    
T  35962383 tcctcggcagttaactcccgaggttttcctcggcagttaactgtagccggatttcaaattcctcgacagttaactgccga 35962304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 146
Target Start/End: Original strand, 35966753 - 35966884
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgt 114  Q
    ||||||||| |||||  |||| ||| || ||||||||||||| ||||| ||||| |||||||||||||||||| ||| |||||  |||  ||||| ||||    
T  35966753 cagttaactaccgaggatttcttcgacaattaactgcagtcggatttcaaattcctcggcagttaactgccgagggggcaaaattgtattttactagtgt 35966852  T
Q  115 gccacgtccttatcaaatgtgggaacaacaat 146  Q
    | |||  ||||||||||| |||||||||||||    
T  35966853 gacacaaccttatcaaatatgggaacaacaat 35966884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 18441431 - 18441576
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||| || |||  | |  ||||  |||||||||||||||||| ||| ||||||||    
T  18441431 cagaagatcctcggcagttaactgccgaggtttttctcggcagttaactacaatcggttattgaatttctcggcagttaactgccgagggggcaaaaacg 18441530  T
Q  101 taaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||  ||||| ||||| | |  |||||| |||||||  |||||||||    
T  18441531 tattttacttgtgtgtctcagccttatgaaatgtgtcaacaacaat 18441576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 13 - 142
Target Start/End: Original strand, 39939217 - 39939346
Alignment:
Q  13 ggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgt 112  Q
    ||||||||||| || || ||||||| ||||||||||||||| || ||||||||  ||||| || ||||||| ||| ||  ||||||||| | ||||||||    
T  39939217 ggcagttaactacctaggttttccttggcagttaactgcagccggatttctaaaacttcgacaattaactgtcgagggagcaaaaacgtcatttactcgt 39939316  T
Q  113 gtgccacgtccttatcaaatgtgggaacaa 142  Q
    ||| ||| |||||||  |||||||||||||    
T  39939317 gtgacacatccttatgtaatgtgggaacaa 39939346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 31 - 115
Target Start/End: Original strand, 20549252 - 20549336
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    |||||||||| |||||||||||| |||||||| ||||| |||||||||||||||||| ||| |||||  ||||| ||||||||||    
T  20549252 ttttcctcggtagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaatactcgtgtg 20549336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 41855442 - 41855350
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    ||||| |||||||| ||||| ||||||||||||||||||||||| ||| |||  ||||||||| |||||||||||||| | | ||||||||||    
T  41855442 ctcggtagttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgaggaggcaaaaacgta 41855350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 11 - 146
Target Start/End: Complemental strand, 34366984 - 34366850
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||| |||||||||| |||||||||||| || |||| |||  |||||||||||||||| || |||| |||||| ||   ||||||    
T  34366984 tcggcagttaactaccgaggttttcctcggaagttaactgcagccggatttataaaacttcggcagttaactgacg-aggggcaaaaaggtcttttactc 34366886  T
Q  111 gtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||| |||  ||||||  |||||||||||| ||||    
T  34366885 gtgtggcacagccttatgtaatgtgggaacatcaat 34366850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Complemental strand, 41016490 - 41016415
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    |||||||||||||||| ||||| |||||||||||||||||||||||| | ||||||||  |||||| |||||||||    
T  41016490 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagttggatttctaaaacttcggtagttaactg 41016415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 11 - 109
Target Start/End: Original strand, 42605234 - 42605332
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    ||||||||||||| ||||  ||||| ||||||||||||||||| ||| |||  ||||||||| |||||||||||||| |||  |||||| |||||||||    
T  42605234 tcggcagttaactaccgatgttttcatcggcagttaactgcagccgatttttgaattcttcgacagttaactgccgagggggtaaaaacataaattact 42605332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 11 - 116
Target Start/End: Complemental strand, 18438707 - 18438602
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||||||||| ||||||||||||||||||||||| ||  | |  ||||| ||  |||||||||||||||||| ||||| ||||  |||||     
T  18438707 tcggcagttaactcccgaggttttcctcggcagttaactgcagccggttattgaattcctcaacagttaactgccgaaggggcaaaagcgtattttactt 18438608  T
Q  111 gtgtgc 116  Q
    ||||||    
T  18438607 gtgtgc 18438602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 9 - 146
Target Start/End: Original strand, 40077248 - 40077385
Alignment:
Q  9 cctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattac 108  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||| |||| |||| | | | ||||| || |  || ||| ||||||||||  ||||    
T  40077248 cctcggcagttaactaccgaggttttcctcggcagttaactgcagtcggatttttaataccttgacagtttaccgttgagggggcaaaaacgtattttac 40077347  T
Q  109 tcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||  | |  ||||||||||||||  |||||||||    
T  40077348 tcgtgtttctcagccttatcaaatgtgtcaacaacaat 40077385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 70 - 135
Target Start/End: Complemental strand, 41274639 - 41274574
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtg 135  Q
    |||||| ||||||||||||||| |||||| ||||||||||||||||||||  ||||||||||||||    
T  41274639 tcggcaattaactgccgaaggggcaaaaaagtaaattactcgtgtgccacagccttatcaaatgtg 41274574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 10 - 114
Target Start/End: Complemental strand, 18205860 - 18205756
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||| ||||||| ||||||||||||||| ||  |||  |||||||||||||||||| ||||| | |  |||||||||  |||||    
T  18205860 ctcggcagttaactaccgaggttttccttggcagttaactgcagccggtttttgaattcttcggcagttaaccgccgaggtggtaaaaacgtattttact 18205761  T
Q  110 cgtgt 114  Q
    |||||    
T  18205760 cgtgt 18205756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 31 - 91
Target Start/End: Complemental strand, 28617621 - 28617561
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||||||    
T  28617621 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccgaaggg 28617561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 33 - 117
Target Start/End: Original strand, 39753020 - 39753103
Alignment:
Q  33 ttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgcc 117  Q
    |||||||| | |||||||||| ||  |||| ||||| |||||||||||||||||| |||||||||| ||||||||||||||||||    
T  39753020 ttcctcggtatttaactgcagccgg-tttcaaattcctcggcagttaactgccgatgggacaaaaatgtaaattactcgtgtgcc 39753103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 10 - 146
Target Start/End: Complemental strand, 7168162 - 7168026
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    ||||| ||| |||| ||||| ||||||||||||||||||||||| ||  |||  ||||||||||||| |||| | ||| ||| ||||| ||||  |||||    
T  7168162 ctcggtagtcaactaccgaggttttcctcggcagttaactgcagccggtttttgaattcttcggcagctaacagtcgagggggcaaaatcgtattttact 7168063  T
Q  110 cgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
     ||||||| |  |||||| |||||||  |||||||||    
T  7168062 tgtgtgcctcagccttatgaaatgtgtcaacaacaat 7168026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 25 - 117
Target Start/End: Complemental strand, 39751132 - 39751041
Alignment:
Q  25 ccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgcc 117  Q
    ||||| ||||||||||||||||||||||| ||  |||| ||||| ||||||||||| |||| | ||| ||||||||||  |||||||||||||    
T  39751132 ccgaggttttcctcggcagttaactgcagccgg-tttcaaattcatcggcagttaattgccaagggggcaaaaacgtattttactcgtgtgcc 39751041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Complemental strand, 44933912 - 44933856
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||    
T  44933912 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 44933856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 2335145 - 2335224
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  |||||| |||||||||||||    
T  2335145 tcctcggtagtttactaccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccga 2335224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 7344554 - 7344597
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  7344554 tcctcggcagttaactcccgaggttttcctcggcagttaactgc 7344597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 15030960 - 15030917
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  15030960 tcctcggcagttaactcccgaggttttcctcggcagttaactgc 15030917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 27501676 - 27501597
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  |||||| |||||||||||||    
T  27501676 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggtagttaactgccga 27501597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 38604245 - 38604320
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||||||||||||||||    
T  38604245 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactg 38604320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 10 - 84
Target Start/End: Original strand, 5533024 - 5533098
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    ||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  |||||||||||||||||    
T  5533024 ctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgc 5533098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 34 - 91
Target Start/End: Complemental strand, 22547519 - 22547462
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||| |||||||||||| || ||||||||  ||||||||||||||||||||||||    
T  22547519 tcctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccgaaggg 22547462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 31 - 112
Target Start/End: Complemental strand, 35389561 - 35389480
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgt 112  Q
    |||||||||||||||||||||||  |  |||  ||||  |||||||||||||| ||||| | ||||||||||||||||||||    
T  35389561 ttttcctcggcagttaactgcagctggtttttgaatttctcggcagttaactgtcgaagaggcaaaaacgtaaattactcgt 35389480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 13 - 98
Target Start/End: Original strand, 38872932 - 38873017
Alignment:
Q  13 ggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaa 98  Q
    ||||||||| | ||||| ||||||||||||||||||||||| ||  |||  ||||| |||| ||||||||| ||| ||||||||||    
T  38872932 ggcagttaattaccgaggttttcctcggcagttaactgcagccggtttttaaattcctcggtagttaactgacgaggggacaaaaa 38873017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 2 - 51
Target Start/End: Complemental strand, 41274674 - 41274625
Alignment:
Q  2 agaagatcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||| |||||||||||||| |||||||||||||||||| ||||||||    
T  41274674 agaagattctcggcagttaactaccgagattttcctcggcaattaactgc 41274625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 43262497 - 43262363
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||  | ||||| ||| | |||| |||    |||||| |||  |||||||| | |||    
T  43262497 tcctcggcagttaactaccgaagttttcctcggcagttaactgcagctggatttcaaatacctcggaagt----tgccgagggggtaaaaacgtcattta 43262402  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  ||||||  |||||| ||||||||||    
T  43262401 ctcgtgtggcacagccttatgtaatgtgagaacaacaat 43262363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 5 - 61
Target Start/End: Original strand, 15033141 - 15033197
Alignment:
Q  5 agatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt 61  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||| ||||| |||||||    
T  15033141 agatcctcggcagttaactaccgaggtttccctcggcagttaattgcagccgaattt 15033197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 102
Target Start/End: Complemental strand, 22577739 - 22577647
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    |||||||||||||| ||||| ||||||||| ||||||||||||  | | |||  ||||| || ||| ||||||||||| || |||||||||||    
T  22577739 ctcggcagttaactaccgaggttttcctcgacagttaactgcaaccaatttttgaattcctcagcaattaactgccgagggaacaaaaacgta 22577647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 28646246 - 28646330
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggaca 94  Q
    ||||| |||||||| ||||  ||||||||||||||||||||||| ||| |||  ||||| |||||| |||||||| | |||||||    
T  28646246 ctcggtagttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactgctgcagggaca 28646330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 94
Target Start/End: Original strand, 28650830 - 28650914
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggaca 94  Q
    ||||| |||||||| ||||  ||||||||||||||||||||||| ||| |||  ||||| |||||| |||||||| | |||||||    
T  28650830 ctcggtagttaactgccgaagttttcctcggcagttaactgcagccgatttttaaattcctcggcaattaactgctgcagggaca 28650914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 34235143 - 34235199
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||| ||||||||||| || |||||||||||  ||||||||||||||||||||    
T  34235143 ttttcctcagcagttaactgtagccgaatttctaaaacttcggcagttaactgccga 34235199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 56
Target Start/End: Original strand, 34892806 - 34892854
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcg 56  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||||||    
T  34892806 tcctcggcagttaactgccgaagttttcctcggcagttaactgcagtcg 34892854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 86
Target Start/End: Complemental strand, 35047232 - 35047156
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccg 86  Q
    ||||| ||||||||  ||| ||||||||||||||||||||||||| || |||  |||||||||||| |||| |||||    
T  35047232 ctcggtagttaactgtcgaaattttcctcggcagttaactgcagttgatttttaaattcttcggcaattaattgccg 35047156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 115
Target Start/End: Complemental strand, 41743943 - 41743859
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    ||||| ||||||||||||||||| || ||||| ||||| |||||||||||||  ||| ||| |||||  ||||| ||||||||||    
T  41743943 ttttcttcggcagttaactgcagccggatttcaaattcctcggcagttaactatcgagggggcaaaagagtaaaatactcgtgtg 41743859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 184549 - 184592
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  184549 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 184592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 66 - 145
Target Start/End: Original strand, 2713097 - 2713176
Alignment:
Q  66 ttcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaa 145  Q
    |||||||||||||||||| ||| ||| |||||| |||| ||||||||||||||   ||  || |||||||||||||||||    
T  2713097 ttcttcggcagttaactgtcgagggggcaaaaatgtaacttactcgtgtgccatagccaaatgaaatgtgggaacaacaa 2713176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 35 - 146
Target Start/End: Original strand, 5304168 - 5304279
Alignment:
Q  35 cctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgt 134  Q
    ||||||||||||||  |||||  |||| |||||| | |||||||||||||||| |||  |||||||||  ||||||||||    |  |||||||||||||    
T  5304168 cctcggcagttaacaacagtcagatttttaattccttggcagttaactgccgagggggtaaaaacgtattttactcgtgtttttcagccttatcaaatgt 5304267  T
Q  135 gggaacaacaat 146  Q
    | ||||||||||    
T  5304268 gtgaacaacaat 5304279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 8419480 - 8419437
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  8419480 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 8419437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 26663030 - 26663073
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  26663030 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 26663073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 32375727 - 32375684
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  32375727 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 32375684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 32584128 - 32584049
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||||| ||||||||| ||||    
T  32584128 tcctcggaagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccga 32584049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 7 - 90
Target Start/End: Complemental strand, 40740983 - 40740900
Alignment:
Q  7 atcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagg 90  Q
    ||||||||||||||||| ||||  ||||||||||||||||||||||| ||  | | |||   ||||||||||||||| ||||||    
T  40740983 atcctcggcagttaactgccgaagttttcctcggcagttaactgcagccggttctttaaaatttcggcagttaactgtcgaagg 40740900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 31957886 - 31957772
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    ||||||||| |||||||||||| || | ||| ||||| |||| ||||| ||| ||| |||  |||| ||||  ||||| ||||| |||  |||||||| |    
T  31957886 tttcctcggtagttaactgcagccggaattcaaattcctcggtagttagctgtcgagggggtaaaatcgtattttactagtgtggcacaaccttatcaca 31957787  T
Q  132 tgtgggaacaacaat 146  Q
    |||||||||||||||    
T  31957786 tgtgggaacaacaat 31957772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 41744715 - 41744829
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    ||||||| ||||||||| |||| |||| ||| ||||| ||| ||||||  || |||||||  |||| ||||  ||||| ||||| |||  | ||||||||    
T  41744715 tttcctcagcagttaacggcagccgaaattcaaattcctcgacagttatttgtcgaaggggtaaaatcgtattttactagtgtgacacaactttatcaaa 41744814  T
Q  132 tgtgggaacaacaat 146  Q
    |||||||||||||||    
T  41744815 tgtgggaacaacaat 41744829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 2712478 - 2712433
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||||    
T  2712478 tcctcggcagttaactgccgaaattttcctcggtagttaactgcag 2712433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 34 - 135
Target Start/End: Complemental strand, 3395942 - 3395841
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatg 133  Q
    ||||||||||||||||||| || | |||  ||||| ||||||||||||||| || ||| ||||||| ||  ||||| ||||||| |  |||||| |||||    
T  3395942 tcctcggcagttaactgcaatcaatttttaaattcctcggcagttaactgctgagggggcaaaaacatattttacttgtgtgcctcaaccttatgaaatg 3395843  T
Q  134 tg 135  Q
    ||    
T  3395842 tg 3395841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 1116208 - 1116264
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||| |||||||||||||||||| || ||||| ||||| ||| ||||||||||||||    
T  1116208 tttttctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccga 1116264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 56
Target Start/End: Complemental strand, 13782311 - 13782263
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcg 56  Q
    |||||||||||||||| ||||  ||||||||||||||||| ||||||||    
T  13782311 tcctcggcagttaactgccgaagttttcctcggcagttaattgcagtcg 13782263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 16940273 - 16940317
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgca 52  Q
    |||||||||||||||| |||| |||||||||| ||||||||||||    
T  16940273 tcctcggcagttaactgccgaaattttcctcgacagttaactgca 16940317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 21406343 - 21406267
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||| ||  ||   ||||| |||||||||||||||    
T  21406343 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgc 21406267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 21800835 - 21800759
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    |||||||||||||||| ||||  |||||||||| |||||||||||| ||  ||   ||||| |||||||||||||||    
T  21800835 tcctcggcagttaactaccgaagttttcctcggtagttaactgcagccggtttatgaattcctcggcagttaactgc 21800759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 34234597 - 34234521
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||||||||| |||| |||  |||||||| | ||||||||||| |||  ||||||||||||||  |||||||||    
T  34234597 tcggcagttaactaccgagggggtaaaaacgtcatttactcgtgtggcacagccttatcaaatgtgtaaacaacaat 34234521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Complemental strand, 36127445 - 36127369
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||| ||||||||  ||||||||||||| |||||||||| ||| ||  |||||||  ||||| ||||||||||||||    
T  36127445 tcggtagttaactgtcgagattttcctcagcagttaacttcagccggttttctaaaacttcgtcagttaactgccga 36127369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 39491141 - 39491177
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||| |||||||||||||||||||||||||||    
T  39491141 cagttaacttccgagattttcctcggcagttaactgc 39491177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 91
Target Start/End: Original strand, 40039684 - 40039764
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    |||||||||||||  |||| |||||||||| |||||||||||||||| |||  | ||| ||| |||||||||  |||||||    
T  40039684 tcggcagttaactatcgaggttttcctcggtagttaactgcagtcgattttggacttcctcgacagttaactatcgaaggg 40039764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 43363280 - 43363336
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||| |||||||||||| || ||||||||  ||||||||||||| ||||||    
T  43363280 ttttcctcggtagttaactgcagccgtatttctaaaacttcggcagttaagtgccga 43363336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 35 - 91
Target Start/End: Complemental strand, 45409920 - 45409864
Alignment:
Q  35 cctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||||||||||||| | ||| || ||||  ||||||||||||||||||||||||    
T  45409920 cctcggcagttaactgccgccgatttactaaaacttcggcagttaactgccgaaggg 45409864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 483892 - 483849
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  483892 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 483849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 1056198 - 1056241
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||| ||||||||||||| || |||||||||||||||||||||    
T  1056198 tcctcagcagttaactcccaaggttttcctcggcagttaactgc 1056241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 17924280 - 17924323
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||| ||||||||||||||||    
T  17924280 tcctcggcagttaactaccgaggtttttctcggcagttaactgc 17924323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 22014322 - 22014279
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||    
T  22014322 tcctcggtagttaactaccgaggttttcctcggcagttaactgc 22014279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 22519559 - 22519602
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  22519559 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 22519602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 36677926 - 36677969
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||| ||||||||||| ||||| |||||||||||||||||||||    
T  36677926 tccttggcagttaactaccgaggttttcctcggcagttaactgc 36677969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #81
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 43188126 - 43188011
Alignment:
Q  32 tttcctcggcagttaactgc-agtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    |||||||||||||||||| | || || |||| |||||| ||| || ||||||| ||| ||| ||||| ||||  ||||||||||  | |  |||||||||    
T  43188126 tttcctcggcagttaactaccagccggatttttaattcctcgacaattaactgtcgagggggcaaaatcgtattttactcgtgtttctcagccttatcaa 43188027  T
Q  131 atgtgggaacaacaat 146  Q
    ||||| ||||||||||    
T  43188026 atgtgagaacaacaat 43188011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #82
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 43520773 - 43520852
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||||||| ||||  |||||||| |||||||||||||| ||| | | |||   |||||||||||||||||||    
T  43520773 tcctcggtagttaactgccgaagttttcctcagcagttaactgcagccgattctttaaaatttcggcagttaactgccga 43520852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #83
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 45066358 - 45066401
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||| | ||||| |||||||||||||||||||||    
T  45066358 tcctcggcagttaattaccgaggttttcctcggcagttaactgc 45066401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 64 - 146
Target Start/End: Complemental strand, 20546873 - 20546791
Alignment:
Q  64 aattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||| |||| ||||||||||||| |||  |||| ||||  ||||| ||||| |||  |||||||| ||||||||||||||||    
T  20546873 aattcctcggtagttaactgccgagggggtaaaatcgtattttactagtgtggcacaaccttatcacatgtgggaacaacaat 20546791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 32383205 - 32383247
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||    
T  32383205 tcggcagttaactaccgaggttttcctcggtagttaactgcag 32383247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 32437160 - 32437202
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||    
T  32437160 tcggcagttaactaccgaggttttcctcggtagttaactgcag 32437202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Complemental strand, 40039199 - 40039157
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||    
T  40039199 tcggcagttaacttccgaggttttcctcggtagttaactgcag 40039157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 7121783 - 7121828
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| ||||  |||||||| ||||||||||||||    
T  7121783 tcctcggcagttaactgccgaagttttcctcagcagttaactgcag 7121828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 31 - 84
Target Start/End: Original strand, 44841894 - 44841947
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    |||| |||||||||||||||||  || ||||||||  |||||||||||||||||    
T  44841894 tttttctcggcagttaactgcaaccgtatttctaaaacttcggcagttaactgc 44841947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 70 - 146
Target Start/End: Complemental strand, 545948 - 545873
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||| |||||| |||||||||| | |||| | |||| |||  ||||||||||||||  |||||||||    
T  545948 tcggcagttaactgtcgaagg-acaaaaacgtcatttacacatgtggcacagccttatcaaatgtgtaaacaacaat 545873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 42 - 146
Target Start/End: Complemental strand, 20854659 - 20854556
Alignment:
Q  42 agttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaaca 141  Q
    |||||||||| | ||  |||||||  ||||||||||||||||||| |||||||   |  ||||||||||||||  | |  |||||||||||||| |||||    
T  20854659 agttaactgccgccggttttctaaaacttcggcagttaactgccg-agggacatgtagataaattactcgtgtttctcagccttatcaaatgtgtgaaca 20854561  T
Q  142 acaat 146  Q
    |||||    
T  20854560 acaat 20854556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 70 - 146
Target Start/End: Original strand, 39846990 - 39847066
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||||||||| ||| ||| ||||| | ||  ||||||||||  | |  |||||||||||||||||||||||||    
T  39846990 tcggcagttaactggcgagggggcaaaatcttattttactcgtgtttctcagccttatcaaatgtgggaacaacaat 39847066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 7e-32; HSPs: 96)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 7189948 - 7190085
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||  ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||| |||| ||||||||||| |||    
T  7189948 tcctcggcagttaactaccgaagttttcctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccg-aggggcaaaaacgtaattta 7190046  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  ||||||  |||||||||||| ||||    
T  7190047 ctcgtgtggcacaaccttatgtaatgtgggaacatcaat 7190085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 23346856 - 23346719
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| ||||||| ||||||||||||||| || |||| |||  |||||||||||||||||||||||| ||||||||| | |||    
T  23346856 tcctcggcagttaactaccgaggttttccttggcagttaactgcagccggatttataaaacttcggcagttaactgccgaaggg-caaaaacgtcattta 23346758  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| |||  ||||||||||||||  |||||||||    
T  23346757 ctcgtgtggcacaaccttatcaaatgtgtaaacaacaat 23346719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 29397986 - 29397852
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||  || ||| ||||||| |||  || |||||| ||||||||    
T  29397986 tcctcggcagttaactcccgaggttttcctcggcagttaactgcagtcggatttctaatttctcagcaattaactgtcgatagggcaaaaaagtaaatta 29397887  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaa 142  Q
    |||||||| |||   ||| ||||||||||||||||    
T  29397886 ctcgtgtgacacaatcttgtcaaatgtgggaacaa 29397852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 10 - 146
Target Start/End: Original strand, 34639313 - 34639449
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||||||||  |||||||| |||||||||||||| || |||| |||||  |||||||||| ||||||| ||| |||||| ||||||||||    
T  34639313 ctcggcagttaactcccgatgttttcctcagcagttaactgcagccggatttttaatttctcggcagttacctgccgagggggcaaaaaagtaaattact 34639412  T
Q  110 cgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
     ||||| |||  |||||||||||||||||||| ||||    
T  34639413 agtgtggcacagccttatcaaatgtgggaacatcaat 34639449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 135
Target Start/End: Original strand, 23347325 - 23347451
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||||||||||| || ||||| |||||||||| |||||||||||| || ||||||||  |||||||||||||||||||||||| ||||||||| | |||    
T  23347325 tcctcggcagttagctaccgaggttttcctcggtagttaactgcagccggatttctaaaacttcggcagttaactgccgaaggg-caaaaacgtcattta 23347423  T
Q  108 ctcgtgtgccacgtccttatcaaatgtg 135  Q
    |||||||| |||  ||||||||||||||    
T  23347424 ctcgtgtggcacagccttatcaaatgtg 23347451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 3943189 - 3943326
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| |||| |||||||||||||||||| || ||||||||  ||||||||||||||||||| |||  ||||||||| | |||    
T  3943189 tcctcggcagttaactaccgaggtttttctcggcagttaactgcagccggatttctaaaacttcggcagttaactgccg-aggagcaaaaacgtcattta 3943287  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||||| ||   ||||||| |||||||||||||||||    
T  3943288 ctcgtgtggcatagccttatctaatgtgggaacaacaat 3943326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 27276371 - 27276509
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||||||| |||||||||||| ||||||||||||||||||||||| || ||||| ||||| || ||||||||||||||| |||  |||| ||||  |||    
T  27276371 tcctcggcaattaactcccgaggttttcctcggcagttaactgcagccggatttcaaattcctcagcagttaactgccgagggggtaaaatcgtatttta 27276470  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||| |||  |||||||| ||||||||||||||||    
T  27276471 ctagtgtggcacagccttatcacatgtgggaacaacaat 27276509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 31 - 147
Target Start/End: Complemental strand, 1096648 - 1096532
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    ||||||||||||||||||||||| || ||||| ||||| |||||||||||| ||||| ||| ||||| ||||  ||||| |||||||||  |||||||||    
T  1096648 ttttcctcggcagttaactgcagccggatttcaaattcctcggcagttaacagccgagggggcaaaatcgtattttactagtgtgccacaaccttatcaa 1096549  T
Q  131 atgtgggaacaacaata 147  Q
    |||||| ||||||||||    
T  1096548 atgtggaaacaacaata 1096532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 43870141 - 43870256
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    ||||||||||||| |||||||||||| ||||||||  |||||||||||||||||||| ||| ||||||||| | ||||||||||| |||  ||||||  |    
T  43870141 ttttcctcggcagctaactgcagtcggatttctaaaacttcggcagttaactgccgatggggcaaaaacgtcatttactcgtgtggcacaaccttatgta 43870240  T
Q  131 atgtgggaacaacaat 146  Q
    ||||||||||| ||||    
T  43870241 atgtgggaacatcaat 43870256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 146
Target Start/End: Original strand, 29093818 - 29093968
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtc-----gaatttctaattcttcggcagttaactgccgaagggacaa 95  Q
    ||||||||||||||||||||||| || || |||||||||||| ||||||||||||     || |||  ||||  |||||||||||||| ||| ||| |||    
T  29093818 cagaagatcctcggcagttaactgccaaggttttcctcggcaattaactgcagtcagccggatttttaaatttatcggcagttaactgtcgagggggcaa 29093917  T
Q  96 aaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||  ||||||||||||||||||||  ||||||  |||||||||||||||||    
T  29093918 aagagtaaattactcgtgtgccacagccttatgtaatgtgggaacaacaat 29093968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 25 - 146
Target Start/End: Complemental strand, 1149531 - 1149410
Alignment:
Q  25 ccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtcct 124  Q
    ||||| ||||||||| |||||||||||| ||| ||||| ||||| |||||||||||||||||| ||  ||||| ||||  ||||| ||||| |||  |||    
T  1149531 ccgaggttttcctcgacagttaactgcaatcggatttcaaattcctcggcagttaactgccgagggagcaaaatcgtattttactagtgtggcacaacct 1149432  T
Q  125 tatcaaatgtgggaacaacaat 146  Q
    ||||||||||||||||||||||    
T  1149431 tatcaaatgtgggaacaacaat 1149410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 8 - 109
Target Start/End: Complemental strand, 28342599 - 28342498
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| || ||| |||||||||||||||| ||||| ||  |||  ||||||||| |||||||||||||||||| |||||||||||||||    
T  28342599 tcctcggcagttaactaccaagaatttcctcggcagttaattgcagccggtttttgaattcttcgacagttaactgccgaaggggcaaaaacgtaaatta 28342500  T
Q  108 ct 109  Q
    ||    
T  28342499 ct 28342498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 25184827 - 25184935
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| ||||||||||||||||||||||| ||  |||| ||||| ||| ||||||||||| || ||| ||||||||||  |||    
T  25184827 tcctcggcagttaactaccgaggttttcctcggcagttaactgcagccg-gtttcaaattcctcgacagttaactgctgagggggcaaaaacgtatttta 25184925  T
Q  108 ctcgtgtgcc 117  Q
    ||||||||||    
T  25184926 ctcgtgtgcc 25184935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 10 - 135
Target Start/End: Original strand, 41008927 - 41009051
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||  ||||||||||||||||| ||||| ||  || | ||||| |||||||||||||||||| | | |||||||||||||||||    
T  41008927 ctcggcagttaactaccgaagttttcctcggcagttaaatgcagccgg-ttacaaattcctcggcagttaactgccgaggaggcaaaaacgtaaattact 41009025  T
Q  110 cgtgtgccacgtccttatcaaatgtg 135  Q
    |||||| | ||  |||||||||||||    
T  41009026 cgtgtgtctcggtcttatcaaatgtg 41009051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 114
Target Start/End: Original strand, 41500224 - 41500337
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| ||||| |||| |||||||||||||||||| || ||||  ||||||| |  ||||||||||||| ||| ||||| ||    
T  41500224 cagaagatcctcggcagttaactaccgaggtttttctcggcagttaactgcagccggattttgaattctttgatagttaactgccgagggggcaaaagcg 41500323  T
Q  101 taaattactcgtgt 114  Q
    ||  ||||||||||    
T  41500324 tattttactcgtgt 41500337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 10 - 117
Target Start/End: Complemental strand, 435416 - 435310
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    ||||||||| ||||  |||| |||||||||| |||| ||||||| ||| |||| ||||| |||||||||||||||| | ||| |||||||||||||||||    
T  435416 ctcggcagtcaactatcgaggttttcctcggtagtttactgcagccga-tttcaaattcatcggcagttaactgccaagggggcaaaaacgtaaattact 435318  T
Q  110 cgtgtgcc 117  Q
    ||||||||    
T  435317 cgtgtgcc 435310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 17424215 - 17424126
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtc-gaatttctaattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||| | || |||| ||   |||||||||||||||||||||    
T  17424215 cagaagatcctcggcagttaactaccgaggttttcctcggcagttaactgcagccggattttccaaaatttcggcagttaactgccgaag 17424126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 32956340 - 32956488
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaat----------tcttcggcagttaactgccgaagggacaaaa 97  Q
    |||||||||||| ||| ||||||||||||||||||||||||| ||| || |||||||||          | ||||||| |||||| |||| |||||||||    
T  32956340 tcctcggcagttgactaccgagattttcctcggcagttaactacagccggatttctaatttatcggcagttttcggcaattaactaccgaggggacaaaa 32956439  T
Q  98 acgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||| ||||||||||||||||   || |||| || ||||||||||||||    
T  32956440 acgtcaattactcgtgtgccagagccgtatctaacgtgggaacaacaat 32956488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 41497540 - 41497439
Alignment:
Q  16 agttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtg 115  Q
    |||||||| ||||| |||||||||||| |||||||||| ||  |||  ||||||||||||||||| || ||| | | |||||||||||||||||||||||    
T  41497540 agttaactaccgaggttttcctcggcaattaactgcagccggtttttgaattcttcggcagttaagtgtcgaggtggcaaaaacgtaaattactcgtgtg 41497441  T
Q  116 cc 117  Q
    ||    
T  41497440 cc 41497439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 8 - 92
Target Start/End: Complemental strand, 3795413 - 3795329
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggga 92  Q
    |||||||||||||||| || || ||||||||||||||||||||||| || ||||| ||||| ||| |||||||||||||| ||||    
T  3795413 tcctcggcagttaacttccaaggttttcctcggcagttaactgcagccggatttcaaattcctcgacagttaactgccgagggga 3795329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 34638223 - 34638136
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaag 89  Q
    ||||||||||||| || |||||| ||||  |||||||||||||||||||| |  |||||||||||||| ||||||||||||||||||||    
T  34638223 cagaagatcctcgacaattaactaccgaagttttcctcggcagttaactgaac-cgaatttctaattcctcggcagttaactgccgaag 34638136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 83
Target Start/End: Original strand, 28477064 - 28477139
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    |||| ||||||||||| ||||| ||||||||||||||||||||||| || ||||||||  ||||||||||||||||    
T  28477064 tccttggcagttaactaccgaggttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactg 28477139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 34 - 146
Target Start/End: Original strand, 20951069 - 20951180
Alignment:
Q  34 tcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaatg 133  Q
    |||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||| ||   | |||| ||||| ||||| |||  |||||||| |||    
T  20951069 tcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgaaggg-catttaggtaatttactggtgtggcacagccttatcacatg 20951167  T
Q  134 tgggaacaacaat 146  Q
    |||||||| ||||    
T  20951168 tgggaacagcaat 20951180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 11 - 115
Target Start/End: Original strand, 35493341 - 35493445
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| |||| ||||||||||||||||||||||||  |  |||  ||||| ||||||||||||| |||| ||| ||||| ||||  ||||||    
T  35493341 tcggcagttaactaccgatattttcctcggcagttaactgcagctggtttttgaattcctcggcagttaactaccgagggggcaaaagcgtattttactc 35493440  T
Q  111 gtgtg 115  Q
    |||||    
T  35493441 gtgtg 35493445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 31 - 146
Target Start/End: Original strand, 30803038 - 30803152
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaa 130  Q
    ||||||||||||||||||||||| || ||||||||  |||||||||||||||||||| ||||||     |||| ||||||||||| |||  ||  | |||    
T  30803038 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga-gggacatttgagtaatttactcgtgtggcacagccaaaccaa 30803136  T
Q  131 atgtgggaacaacaat 146  Q
    ||||||||||||||||    
T  30803137 atgtgggaacaacaat 30803152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 41183221 - 41183299
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||| ||  |||| ||||||||||||||||| ||||||    
T  41183221 tcctcggcagttaactaccgaggttttcctcggtagttaactgcagccg-gtttcaaattcttcggcagttaattgccga 41183299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 146
Target Start/End: Original strand, 24607589 - 24607703
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    |||||||||||||||||||||| ||  ||| ||| |||||||||||||||||| || |||  |||||||||||||||  ||||||| |  ||||||  ||    
T  24607589 tttcctcggcagttaactgcagccggttttttaaatcttcggcagttaactgctgagggggaaaaaacgtaaattacctgtgtgcctcagccttatgcaa 24607688  T
Q  132 tgtgggaacaacaat 146  Q
    ||||  |||||||||    
T  24607689 tgtgtcaacaacaat 24607703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 24749738 - 24749624
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    |||||||||||||||||| |||||| | ||| ||||| |||| ||||||||||||| |||  |||| ||||  ||||| ||||| |||  |||||||| |    
T  24749738 tttcctcggcagttaactacagtcggaattcaaattcctcggtagttaactgccgagggggtaaaatcgtattttactagtgtggcacagccttatcaca 24749639  T
Q  132 tgtgggaacaacaat 146  Q
    |||||||||| ||||    
T  24749638 tgtgggaacagcaat 24749624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 115
Target Start/End: Original strand, 19187222 - 19187327
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||   | ||||  ||||  |||||||||||||||||| ||| ||||||||||  |||||    
T  19187222 ctcggcagttaactaccgaggttttcctcggcaggtaactgcaactggattttgaatttctcggcagttaactgccgagggggcaaaaacgtattttact 19187321  T
Q  110 cgtgtg 115  Q
     |||||    
T  19187322 tgtgtg 19187327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 18 - 146
Target Start/End: Complemental strand, 25964877 - 25964742
Alignment:
Q  18 ttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcgg-------cagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    |||||| ||||| ||||||||||||||||||||||| || |||| |||||| ||||       | |||||||||||| ||| ||||| ||||  ||||||    
T  25964877 ttaactaccgaggttttcctcggcagttaactgcagccggatttttaattcctcggtccttgacggttaactgccgagggggcaaaatcgtattttactc 25964778  T
Q  111 gtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||  | |  |||||||||||||||||||||||||    
T  25964777 gtgtttctcagccttatcaaatgtgggaacaacaat 25964742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 38945816 - 38945759
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||||| || ||||| ||||| ||||||||||||||||||    
T  38945816 attttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccga 38945759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 10 - 91
Target Start/End: Complemental strand, 39489257 - 39489176
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||| |||| ||| ||||  ||||||||| |||||||||||||||| |||| |||  ||||||||||||||||||||||||    
T  39489257 ctcggtagtttactgccgaagttttcctcgacagttaactgcagtcgtatttgtaaaacttcggcagttaactgccgaaggg 39489176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 30 - 146
Target Start/End: Original strand, 1101071 - 1101187
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatca 129  Q
    |||||||||||||||||||| ||| || ||||| ||||| |||||||||||||||||| ||  ||||| | ||  ||||| || |  |||  ||||||||    
T  1101071 attttcctcggcagttaactacagccggatttcaaattcatcggcagttaactgccgagggagcaaaatcatattttactagtatagcacaaccttatca 1101170  T
Q  130 aatgtgggaacaacaat 146  Q
    ||| |||||||||||||    
T  1101171 aatatgggaacaacaat 1101187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 32 - 92
Target Start/End: Original strand, 3803564 - 3803624
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggga 92  Q
    |||||||||||||||||||||| || ||||| ||||| |||||||||||||||||| ||||    
T  3803564 tttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgatggga 3803624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 87
Target Start/End: Original strand, 36510876 - 36510932
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||||||||||||| || ||||||||  ||||||||||||||||||||    
T  36510876 ttttcctcggcagttaactgcagccgtatttctaaaacttcggcagttaactgccga 36510932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 112
Target Start/End: Complemental strand, 41004604 - 41004501
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||  ||||  ||||||||||||||||| ||  || | ||||| |||||||||||||||||| |   |||||||||||||||    
T  41004604 tcctcggcagttaactaccgaagtttttttcggcagttaactgcagccgg-ttacaaattcctcggcagttaactgccgaggaagcaaaaacgtaaatta 41004506  T
Q  108 ctcgt 112  Q
    |||||    
T  41004505 ctcgt 41004501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43982282 - 43982230
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||| |||||||||||||||| ||||| |||||||||||||||||||||||    
T  43982282 cagaagttcctcggcagttaactaccgaggttttcctcggcagttaactgcag 43982230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 15 - 146
Target Start/End: Complemental strand, 2917752 - 2917621
Alignment:
Q  15 cagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgt 114  Q
    ||||||||| | ||| |||||||||||||||||||| || ||  |||  ||||  |||||||||||||||||| ||| ||||||||||  |||||  |||    
T  2917752 cagttaactactgaggttttcctcggcagttaactgtagccggtttttcaatttctcggcagttaactgccgagggggcaaaaacgtattttacttttgt 2917653  T
Q  115 gccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||| |  |||||| |||||||  |||||||||    
T  2917652 gcctcagccttatgaaatgtgtcaacaacaat 2917621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 79
Target Start/End: Original strand, 24754021 - 24754092
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagtta 79  Q
    |||||||||||| | | ||||| |||||||||| |||||||||||| |||||||| ||||| ||||||||||    
T  24754021 tcctcggcagtttattaccgaggttttcctcggtagttaactgcagccgaatttcaaattcctcggcagtta 24754092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 91
Target Start/End: Original strand, 30273147 - 30273230
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||||| |||||| ||||| |||||||||||||||||||| || || |||| |||||||| | ||||||| | ||||||||    
T  30273147 tcctcggcaattaactaccgaggttttcctcggcagttaactgtagccggatttttaattctttgacagttaattaccgaaggg 30273230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 11 - 114
Target Start/End: Original strand, 45137433 - 45137536
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    |||||||||||||  |||  ||||| ||||||||||||||||| ||||||| |||||| |||||| ||||||||| | | | ||||| ||||  ||||||    
T  45137433 tcggcagttaactatcgaagttttcatcggcagttaactgcagccgaatttttaattcctcggcaattaactgccaaggaggcaaaatcgtattttactc 45137532  T
Q  111 gtgt 114  Q
    ||||    
T  45137533 gtgt 45137536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 9660052 - 9660158
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||||||| |||||| || || |||||||||||||| |||||||| ||  | |   |||| ||||||||||||||||||  || |||||| ||||||||    
T  9660052 tcctcggcaattaactaccaaggttttcctcggcagtcaactgcagccggttattgtattcctcggcagttaactgccgagagggcaaaaaagtaaatta 9660151  T
Q  108 ctcgtgt 114  Q
    |||||||    
T  9660152 ctcgtgt 9660158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 3937842 - 3937931
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaattt-ctaattcttcggcagttaactgccgaag 89  Q
    |||||| |||||||||||||||| ||||| ||| ||||||||||||||||||| || ||||   ||   |||||||||||||||||||||    
T  3937842 cagaagttcctcggcagttaacttccgaggtttacctcggcagttaactgcagccggatttgagaaaatttcggcagttaactgccgaag 3937931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 7263093 - 7263048
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||    
T  7263093 tcctcggcagttaactcccgaggatttcctcggcagttaactgcag 7263048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 30493435 - 30493394
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaact 49  Q
    |||||||||||||||| |||||||||||||||||||||||||    
T  30493435 tcctcggcagttaactaccgagattttcctcggcagttaact 30493394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 31974244 - 31974289
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| |||||||||||||||| ||||||||||||    
T  31974244 tcctcggcagttaactgccgagattttcctcggtagttaactgcag 31974289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 10 - 115
Target Start/End: Complemental strand, 45475514 - 45475409
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    ||||| |||||||| ||||| |||||||||||||||||||| || ||  |||  ||||  |||||||||||||||||| ||| ||||| ||||  |||||    
T  45475514 ctcggaagttaactaccgaggttttcctcggcagttaactgtagccggtttttgaatttctcggcagttaactgccgagggggcaaaatcgtattttact 45475415  T
Q  110 cgtgtg 115  Q
     |||||    
T  45475414 tgtgtg 45475409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2648200 - 2648152
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaact 49  Q
    ||||||||| |||||| |||||| |||||||||||||||||||||||||    
T  2648200 cagaagatcatcggcaattaactaccgagattttcctcggcagttaact 2648152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 8 - 84
Target Start/End: Complemental strand, 10424915 - 10424839
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgc 84  Q
    ||||||| |||| ||| ||||  |||||||||||||||||||| || || ||||||||  |||||||||||||||||    
T  10424915 tcctcggtagtttactgccgaagttttcctcggcagttaactgtagccgtatttctaaaacttcggcagttaactgc 10424839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 11 - 135
Target Start/End: Complemental strand, 28419480 - 28419357
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactc 110  Q
    ||||||||||||| ||||  |||||||||| |||||||| | | ||  || ||||  |||||||||||||||||||||||| ||   | ||||| |||||    
T  28419480 tcggcagttaactgccgaagttttcctcggtagttaactaccgccggtttactaaaacttcggcagttaactgccgaaggg-catttaggtaaaatactc 28419382  T
Q  111 gtgtgccacgtccttatcaaatgtg 135  Q
    ||||| |||  ||||||||||||||    
T  28419381 gtgtggcacagccttatcaaatgtg 28419357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 114
Target Start/End: Original strand, 34921758 - 34921861
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattact 109  Q
    |||||||||||||| ||||| |||||||| |||||||||||||| ||  |||  ||||  ||||||||||||| |||  ||| ||||||||||  |||||    
T  34921758 ctcggcagttaactaccgaggttttcctcagcagttaactgcagccggtttttgaatttctcggcagttaactaccg-gggggcaaaaacgtattttact 34921856  T
Q  110 cgtgt 114  Q
    |||||    
T  34921857 cgtgt 34921861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 2 - 78
Target Start/End: Complemental strand, 39393119 - 39393043
Alignment:
Q  2 agaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagtt 78  Q
    |||||||||||| ||||||||| ||||| |||| |||| ||||||||| ||  |||||||||||| | |||||||||    
T  39393119 agaagatcctcgacagttaactaccgaggtttttctcgacagttaactacatccgaatttctaatacctcggcagtt 39393043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 41273268 - 41273328
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||||||||||||||||| | ||| || ||||  ||||||||||||||||||||||||    
T  41273268 ttttcctcggcagttaactgccgccgatttactaaaacttcggcagttaactgccgaaggg 41273328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 7267441 - 7267484
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||||||||||| |||||||||||||    
T  7267441 tcctcggcagttaactaccgagattttccttggcagttaactgc 7267484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 10425816 - 10425895
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||||||||||||||||||||| || ||||||||  ||||| ||||||||| ||||    
T  10425816 tcctcggtagtttactgccgaagttttcctcggcagttaactgcagccgtatttctaaaacttcgacagttaactaccga 10425895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 10 - 101
Target Start/End: Complemental strand, 10825292 - 10825201
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgt 101  Q
    |||||||||||||| ||||| ||||||||| ||||||  ||||| || ||||||||  |||||| |||||||| |||| ||  |||||||||    
T  10825292 ctcggcagttaactgccgaggttttcctcgacagttaggtgcagccggatttctaaaacttcggtagttaactaccgagggagcaaaaacgt 10825201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 22003398 - 22003441
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  22003398 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 22003441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 28468717 - 28468674
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  28468717 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 28468674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 12 - 51
Target Start/End: Complemental strand, 29401647 - 29401608
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  29401647 cggcagttaactcccgagaatttcctcggcagttaactgc 29401608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 29947843 - 29947764
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||||||| ||||  |||||||| || ||||||| ||| || ||||||||  ||||||||||||||||||||    
T  29947843 tcctcggtagttaactgccgaagttttcctcagcggttaactccagccgtatttctaaaacttcggcagttaactgccga 29947764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 35490756 - 35490649
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| || || ||||| || |||||||||||||| ||  |||  |||||||||||||||||| | ||| | | |||||| |||  |||    
T  35490756 tcctcggcagttaactaccaaggttttcttcagcagttaactgcagccggtttttgaattcttcggcagttaaccgtcgaggaggcaaaaatgtatttta 35490657  T
Q  108 ctcgtgtg 115  Q
    ||||||||    
T  35490656 ctcgtgtg 35490649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 39798519 - 39798476
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||||||||||||  ||||||||||||||||||||    
T  39798519 tcctcggcagttaactcccgaggatttcctcggcagttaactgc 39798476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 70 - 116
Target Start/End: Complemental strand, 41052695 - 41052649
Alignment:
Q  70 tcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgc 116  Q
    |||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  41052695 tcggcaattaactgccgaggggacaaaaacgtaaattacttgtgtgc 41052649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 31 - 117
Target Start/End: Complemental strand, 41181490 - 41181404
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgcc 117  Q
    ||||||||||||||||| || || ||  | |  ||||| |||||||||||||||||| ||| ||||||||||  |||||||||||||    
T  41181490 ttttcctcggcagttaaatgtagccggttattgaattcctcggcagttaactgccgagggggcaaaaacgtattttactcgtgtgcc 41181404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 8 - 50
Target Start/End: Complemental strand, 43536178 - 43536136
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactg 50  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  43536178 tcctcggcagttaactaccgaggttttcctcggcagttaactg 43536136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 5351729 - 5351770
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaact 49  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  5351729 tcctcggcagttaactaccgaggttttcctcggcagttaact 5351770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 14456578 - 14456533
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||    
T  14456578 tcctcggtagttaactgccgaggttttcctcggcagttaactgcag 14456533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 24512250 - 24512149
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacg 100  Q
    ||||||||||||||||||||||| ||||| ||||  |||||| ||||||||||  |  ||| |||||| ||  |||||||||| ||| |||  |||||||    
T  24512250 cagaagatcctcggcagttaactaccgaggtttttttcggcaattaactgcagctggttttttaattcctcaacagttaactgtcgagggggtaaaaacg 24512151  T
Q  101 ta 102  Q
    ||    
T  24512150 ta 24512149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 113
Target Start/End: Complemental strand, 24601715 - 24601610
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||   ||||||||| |||||||||||| |   |||  ||||| ||| ||||||||| ||||| ||  |||||| |||||||    
T  24601715 tcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccgaatgggaaaaaacataaatta 24601616  T
Q  108 ctcgtg 113  Q
    ||||||    
T  24601615 ctcgtg 24601610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 113
Target Start/End: Original strand, 24612399 - 24612504
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||   ||||||||| |||||||||||| |   |||  ||||| ||| ||||||||| ||||| ||  |||||| |||||||    
T  24612399 tcctcggcagttaactaccgaagatttcctcggtagttaactgcagccagtttttaaattcctcgacagttaactaccgaatgggaaaaaacataaatta 24612498  T
Q  108 ctcgtg 113  Q
    ||||||    
T  24612499 ctcgtg 24612504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 33222692 - 33222647
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| ||||  |||||||||||||||||||||||    
T  33222692 tcctcggcagttaactgccgaagttttcctcggcagttaactgcag 33222647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 43943765 - 43943720
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||||||| ||||| ||||||||| |||||||||||||    
T  43943765 tcctcggcagttaactaccgagtttttcctcgacagttaactgcag 43943720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 11 - 87
Target Start/End: Original strand, 23409501 - 23409577
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||| ||| ||||| ||||||||||||||||||||||| |   |||  ||||| |||||| |||||||||||    
T  23409501 tcggcagtttacttccgaggttttcctcggcagttaactgcagccagtttttgaattcctcggcaattaactgccga 23409577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35490789 - 35490741
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaact 49  Q
    |||||||||||||  |||||||| ||||| |||||||||||||||||||    
T  35490789 cagaagatcctcgatagttaactaccgaggttttcctcggcagttaact 35490741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 82259 - 82365
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||| |||||||||| | ||| ||||||||| ||||||||||||| ||  |||| ||||  ||| ||||||||| |||| |  |||||||||||  |||    
T  82259 tcctcagcagttaactacggaggttttcctcgacagttaactgcagccg-gtttcaaattactcgacagttaactaccgaggaaacaaaaacgtatttta 82357  T
Q  108 ctcgtgtg 115  Q
    ||||||||    
T  82358 ctcgtgtg 82365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 3935939 - 3935896
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  3935939 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 3935896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 18000308 - 18000265
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||| ||||||||| ||||| |||||||||||||||||||||    
T  18000308 tcctcgccagttaactaccgaggttttcctcggcagttaactgc 18000265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 42499862 - 42499819
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  42499862 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 42499819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 44100795 - 44100838
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||    
T  44100795 tcctcggtagttaactaccgaggttttcctcggcagttaactgc 44100838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 3086083 - 3086033
Alignment:
Q  37 tcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||| ||| || ||||||||  ||||||||||||||||||||    
T  3086083 tcggcagttaactacagccgtatttctaaaacttcggcagttaactgccga 3086033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 36 - 102
Target Start/End: Complemental strand, 12905597 - 12905531
Alignment:
Q  36 ctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    |||||||||||||||||| ||| |||  ||||  |||||||||||||||||| |||| |||| ||||    
T  12905597 ctcggcagttaactgcagccgatttttcaatttctcggcagttaactgccgaggggaaaaaagcgta 12905531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 88
Target Start/End: Original strand, 12908428 - 12908506
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaa 88  Q
    ||||||||||||||  | || ||||||||||||||||||||||| | | |||  ||||  ||| |||||||||||||||    
T  12908428 ctcggcagttaactatcaaggttttcctcggcagttaactgcagccaatttttgaatttctcgacagttaactgccgaa 12908506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 30 - 80
Target Start/End: Original strand, 16583588 - 16583638
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaa 80  Q
    ||||| |||||||||||||||||| ||||||| |||||| ||| |||||||    
T  16583588 atttttctcggcagttaactgcagccgaatttttaattcctcgacagttaa 16583638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 10 - 147
Target Start/End: Complemental strand, 23786198 - 23786061
Alignment:
Q  10 ctcggcagttaactcccga-gattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattac 108  Q
    |||||||||||||| |||| ||||||| ||  || |||||||  | || |||| |||||| |||||||||||||||||| ||||||||| | ||  ||||    
T  23786198 ctcggcagttaactaccgaagattttc-tcaacaattaactgtcgccggatttttaattcctcggcagttaactgccgaggggacaaaatcatattttac 23786100  T
Q  109 tcgtgtgccacgtccttatcaaatgtgggaacaacaata 147  Q
    |  |||  | |  |||||||||| |||||||||||||||    
T  23786099 taatgtttctcagccttatcaaacgtgggaacaacaata 23786061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 57 - 87
Target Start/End: Original strand, 34638125 - 34638155
Alignment:
Q  57 aatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||||||||||||    
T  34638125 aatttctaattcttcggcagttaactgccga 34638155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 11 - 53
Target Start/End: Original strand, 40221130 - 40221172
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||| ||||| |||||||||| ||||||||||||    
T  40221130 tcggcagttaactgccgaggttttcctcggtagttaactgcag 40221172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 90
Target Start/End: Original strand, 43258730 - 43258812
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagg 90  Q
    |||||||||||||||| || |  ||||| |||| |||||||||||| ||  ||| | |  |||||||||||||||||||||||    
T  43258730 tcctcggcagttaactaccaaagttttcttcggtagttaactgcagccggttttttcaaacttcggcagttaactgccgaagg 43258812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 83
Target Start/End: Complemental strand, 43491192 - 43491110
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactg 83  Q
    |||||||| |||||||||||||| || || ||||||||| ||||||| ||||| ||  | |  ||||| ||||||||||||||    
T  43491192 cagaagattctcggcagttaactaccaaggttttcctcgacagttaattgcagccggttattaaattcctcggcagttaactg 43491110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 12 - 53
Target Start/End: Complemental strand, 2983472 - 2983431
Alignment:
Q  12 cggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    |||||||||||| ||||| |||||||||| ||||||||||||    
T  2983472 cggcagttaactgccgaggttttcctcggtagttaactgcag 2983431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 10365785 - 10365830
Alignment:
Q  4 aagatcctcggcagttaactcccgagattttcctcggcagttaact 49  Q
    ||||||||||||| |||||| || || |||||||||||||||||||    
T  10365785 aagatcctcggcatttaactaccaaggttttcctcggcagttaact 10365830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 29090600 - 29090547
Alignment:
Q  93 caaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||| |||||||||| ||||| |||  ||||||||||||| |||||||||||    
T  29090600 caaaaaagtaaattactagtgtggcacaaccttatcaaatgtaggaacaacaat 29090547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 32952783 - 32952730
Alignment:
Q  93 caaaaacgtaaattactcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    |||||| ||||||||||| || |||||  |||||||||||||||||||| ||||    
T  32952783 caaaaaagtaaattactcttgcgccacagccttatcaaatgtgggaacagcaat 32952730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 28138656 - 28138612
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgca 52  Q
    |||||||||||||||| ||||  ||||||||||||||||| ||||    
T  28138656 tcctcggcagttaactgccgaagttttcctcggcagttaattgca 28138612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 31 - 91
Target Start/End: Original strand, 36255733 - 36255793
Alignment:
Q  31 ttttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||||||||||||||||||  ||  ||| |||||| ||| ||||||||||||| ||||    
T  36255733 ttttcctcggcagttaactgcaaccgtgtttttaattcctcgacagttaactgccgcaggg 36255793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Complemental strand, 41565391 - 41565351
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||| ||||| |||||||||| ||||||||||    
T  41565391 tcggcagttaactgccgaggttttcctcggtagttaactgc 41565351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 11 - 51
Target Start/End: Original strand, 43984301 - 43984341
Alignment:
Q  11 tcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    ||||||||||||| ||||| |||||||||||| ||||||||    
T  43984301 tcggcagttaactaccgaggttttcctcggcacttaactgc 43984341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0201 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 8 - 115
Target Start/End: Complemental strand, 22479 - 22372
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||||||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||| ||| |||||  ||||| ||    
T  22479 tcctcggcagttaactaccgagattttcctcagcagttaactgcagccgaatttcaaattcctcggcagttaactgccgagggggcaaaagagtaaaata 22380  T
Q  108 ctcgtgtg 115  Q
    ||||||||    
T  22379 ctcgtgtg 22372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 66; Significance: 6e-29; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 8 - 117
Target Start/End: Original strand, 1178 - 1286
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||| | ||  |||| ||||| |||||||||||||||||| |||||||||||||||||||    
T  1178 tcctcggcagttaacttccgaggttttcctcggcagttaattgctgccgg-tttcaaattcctcggcagttaactgccgaggggacaaaaacgtaaatta 1276  T
Q  108 ctcgtgtgcc 117  Q
    ||||||||||    
T  1277 ctcgtgtgcc 1286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494 (Bit Score: 63; Significance: 4e-27; HSPs: 3)
Name: scaffold0494
Description:

Target: scaffold0494; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 146
Target Start/End: Complemental strand, 907 - 769
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| ||||| ||||||||||||||||||| ||| |||||||| ||||| | |||||||||||||||| |||  |||| ||||  |||    
T  907 tcctcggcagttaactaccgaggttttcctcggcagttaactacagccgaatttcaaattcctaggcagttaactgccgagggggtaaaatcgtatttta 808  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||| |||  |||||||| ||||||||||| ||||    
T  807 ctggtgtggcacagccttatcacatgtgggaacagcaat 769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 5407 - 5364
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  5407 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 5364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0494; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 49
Target Start/End: Complemental strand, 933 - 892
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaact 49  Q
    |||||||||||||||| ||||| |||||||||||||||||||    
T  933 tcctcggcagttaactaccgaggttttcctcggcagttaact 892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 63; Significance: 4e-27; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 17348 - 17486
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||||  |||||||||||||||||||||| || ||||| ||||| |||||||||||||||||| |||  |||| ||||  |||    
T  17348 tcctcggcagttaactaccgaggatttcctcggcagttaactgcagccggatttcaaattcctcggcagttaactgccgagggggtaaaatcgtatttta 17447  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||| |||  |||||||| ||||||||||| ||||    
T  17448 ctagtgtggcacaaccttatcacatgtgggaacagcaat 17486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 61; Significance: 6e-26; HSPs: 2)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 12378 - 12466
Alignment:
Q  1 cagaagatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||||||| ||||| ||||| ||||||||||||||||| || ||||||||  ||||||||||||||||||||||    
T  12378 cagaagatcctcggcagttaactaccgaggttttcatcggcagttaactgcagccggatttctaaaacttcggcagttaactgccgaag 12466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199; HSP #2
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 7 - 146
Target Start/End: Complemental strand, 10729 - 10591
Alignment:
Q  7 atcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatt 106  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||| | ||  || ||||  ||||||||||||| |||||||||| ||   | |||| ||    
T  10729 atcctcggcagttaactaccgaggtttccctcggcagttaactgccgccggtttactaaaacttcggcagttaattgccgaaggg-catttaagtaattt 10631  T
Q  107 actcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    ||||||||| |||  ||  | |||||||||||||||||||    
T  10630 actcgtgtgacacaaccaaaccaaatgtgggaacaacaat 10591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1379 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold1379
Description:

Target: scaffold1379; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 8 - 114
Target Start/End: Original strand, 431 - 537
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    ||||||| |||||||||||||| ||||||||| ||||||||||||| || |||  ||||||||||||||||||||||||| ||  ||||| ||||  |||    
T  431 tcctcggtagttaactcccgaggttttcctcgacagttaactgcagccggattattaattcttcggcagttaactgccgagggagcaaaatcgtatttta 530  T
Q  108 ctcgtgt 114  Q
    |||||||    
T  531 ctcgtgt 537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 51; Significance: 6e-20; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 8 - 146
Target Start/End: Original strand, 4397 - 4535
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaatta 107  Q
    |||||||||||||||| |||||  ||||||||| | |||||||||| || | ||| ||||| |||||||||||||||||| ||   |||| ||||  |||    
T  4397 tcctcggcagttaactaccgaggatttcctcggtatttaactgcagccggagttcaaattcctcggcagttaactgccgagggagtaaaatcgtatttta 4496  T
Q  108 ctcgtgtgccacgtccttatcaaatgtgggaacaacaat 146  Q
    || ||||| |||  |||||||| ||||||||||||||||    
T  4497 ctagtgtggcacaaccttatcacatgtgggaacaacaat 4535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 48; Significance: 4e-18; HSPs: 2)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 15952 - 16031
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||||||| ||||| |||||||||||||||||||||||  | ||||| ||||| ||||||||||||||||||    
T  15952 tcctcggaagttaactaccgaggttttcctcggcagttaactgcagctggatttcaaattcctcggcagttaactgccga 16031  T

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Target: scaffold0116; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 32 - 146
Target Start/End: Complemental strand, 11353 - 11239
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccacgtccttatcaaa 131  Q
    ||||||||| |||||||||||| || | ||| ||||| |||||||||||||||||| |||  |||| ||||  ||||| ||||| |||  ||||||||||    
T  11353 tttcctcggaagttaactgcagccggaattcaaattcctcggcagttaactgccgagggggtaaaatcgtattttactagtgtggcacagccttatcaaa 11254  T
Q  132 tgtgggaacaacaat 146  Q
    |||||||||| ||||    
T  11253 tgtgggaacagcaat 11239  T

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Target: scaffold0618 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0618
Description:

Target: scaffold0618; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 18 - 98
Target Start/End: Complemental strand, 3951 - 3871
Alignment:
Q  18 ttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaa 98  Q
    |||||| ||||| ||||||||||||||||||||||| ||| |||  ||||| ||| |||||||||||||| ||||||||||    
T  3951 ttaactaccgaggttttcctcggcagttaactgcagccgatttttgaattcctcgacagttaactgccgaggggacaaaaa 3871  T

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Target: scaffold0794 (Bit Score: 44; Significance: 9e-16; HSPs: 1)
Name: scaffold0794
Description:

Target: scaffold0794; HSP #1
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 5347 - 5269
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||| ||||| |||||||||| |||||||||||| ||  |||| ||||||||||||||||| ||||||    
T  5347 tcctcggcagttaactaccgaggttttcctcggtagttaactgcagccg-gtttcaaattcttcggcagttaattgccga 5269  T

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Target: scaffold0012 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 32 - 102
Target Start/End: Complemental strand, 232600 - 232530
Alignment:
Q  32 tttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgta 102  Q
    ||||||||||||||||||||||||| |||| |||||| ||| |||||||||||||| |||| |||| ||||    
T  232600 tttcctcggcagttaactgcagtcggatttttaattcctcgacagttaactgccgaggggataaaatcgta 232530  T

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Target: scaffold0012; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 8 - 74
Target Start/End: Original strand, 232829 - 232895
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggc 74  Q
    |||||||||||||||| ||||| ||||||||||||||||| ||||| ||||||| |||||| |||||    
T  232829 tcctcggcagttaactaccgaggttttcctcggcagttaattgcagccgaatttttaattcctcggc 232895  T

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Target: scaffold0101 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 2)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 89
Target Start/End: Original strand, 36528 - 36613
Alignment:
Q  5 agatcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttct-aattcttcggcagttaactgccgaag 89  Q
    ||||||||||||||||||| ||||| ||||||||||||||||| ||||| || |||| | ||   |||||||||||||||||||||    
T  36528 agatcctcggcagttaactaccgaggttttcctcggcagttaattgcagccggatttttcaaaatttcggcagttaactgccgaag 36613  T

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Target: scaffold0101; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 41019 - 41062
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||||||||| |||||||||||||||||||||    
T  41019 tcctcggcagttaactcccgaggttttcctcggcagttaactgc 41062  T

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Target: scaffold0219 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 2)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 8 - 115
Target Start/End: Original strand, 20109 - 20217
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaag-ggacaaaaacgtaaatt 106  Q
    ||||||||||| |||| |||||  |||||||| |||||||||| || ||| |||  ||||| |||||||||||||||  ||| ||  |||||||||||||    
T  20109 tcctcggcagtaaactaccgaggatttcctcgacagttaactgtagccgatttttgaattcctcggcagttaactgctaaagaggcaaaaaacgtaaatt 20208  T
Q  107 actcgtgtg 115  Q
    |||||||||    
T  20209 actcgtgtg 20217  T

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Target: scaffold0219; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 33 - 119
Target Start/End: Complemental strand, 15754 - 15668
Alignment:
Q  33 ttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaaacgtaaattactcgtgtgccac 119  Q
    ||||||||||||||||||||  ||  |||  ||||| ||| |||||||||| | | | | |||||||||||||||||||||||||||    
T  15754 ttcctcggcagttaactgcaaccggtttttgaattcctcgacagttaactgtcaatgaggcaaaaacgtaaattactcgtgtgccac 15668  T

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Target: scaffold0260 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 87
Target Start/End: Complemental strand, 11834 - 11777
Alignment:
Q  30 attttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||||||||||||||||||||||| || ||||| ||||| |||| |||||||||||||    
T  11834 attttcctcggcagttaactgcagccggatttcaaattcctcggtagttaactgccga 11777  T

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Target: scaffold0180 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 10 - 90
Target Start/End: Original strand, 15621 - 15701
Alignment:
Q  10 ctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagg 90  Q
    |||||||||||||| || || ||||||||||||||||||||| | ||  || ||||  ||||| |||||||||||||||||    
T  15621 ctcggcagttaactaccaaggttttcctcggcagttaactgccgccggtttactaaaacttcgacagttaactgccgaagg 15701  T

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Target: scaffold0744 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0744
Description:

Target: scaffold0744; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 420 - 463
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  420 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 463  T

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Target: scaffold0513 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0513
Description:

Target: scaffold0513; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 87
Target Start/End: Complemental strand, 8275 - 8196
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    |||| ||||||||||| ||||| ||||| || |||||||||||||  || ||||| ||||| | ||||||||||||||||    
T  8275 tccttggcagttaactaccgaggttttcttcagcagttaactgcatccggatttcaaattccttggcagttaactgccga 8196  T

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Target: scaffold0504 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 91
Target Start/End: Complemental strand, 12458 - 12375
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaaggg 91  Q
    ||||||| |||||||||||||| ||||||||||||||||| ||| | ||  || ||||   |||| ||||||||||||||||||    
T  12458 tcctcgggagttaactcccgaggttttcctcggcagttaattgccgccggtttactaaaatttcgacagttaactgccgaaggg 12375  T

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Target: scaffold0038 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 50123 - 50080
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||||||||||||    
T  50123 tcctcggcagttaactaccgaggttttcctcggcagttaactgc 50080  T

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Target: scaffold0065 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 65394 - 65314
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaat-ttctaattcttcggcagttaactgccgaa 88  Q
    |||||||||||||||| ||||  ||||||||| ||||||||||||| ||| | || ||| | ||||||||||||||||||||    
T  65394 tcctcggcagttaactgccgaagttttcctcgacagttaactgcagccgattcttttaaat-ttcggcagttaactgccgaa 65314  T

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Target: scaffold0293 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0293
Description:

Target: scaffold0293; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Original strand, 719 - 762
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| ||||||| |||||||||||||    
T  719 tcctcggcagttaactaccgaggttttcctgggcagttaactgc 762  T

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Target: scaffold0016 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 87
Target Start/End: Original strand, 69218 - 69297
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||| |||| ||| ||||  ||||| ||| ||||||||||||  || ||||||||  ||||||||||||||||||||    
T  69218 tcctcggtagtttactgccgaagttttcttcgacagttaactgcatccgtatttctaaaacttcggcagttaactgccga 69297  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 8 - 51
Target Start/End: Complemental strand, 84656 - 84613
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgc 51  Q
    |||||||||||||||| ||||| |||||||||||| ||||||||    
T  84656 tcctcggcagttaactaccgaggttttcctcggcacttaactgc 84613  T

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Target: scaffold0388 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 8 - 86
Target Start/End: Original strand, 13906 - 13984
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcagtcgaatttctaattcttcggcagttaactgccg 86  Q
    ||||||| |||||||| ||||  |||| |||||||||||||||||| ||  ||| |||||  ||||||||| |||||||    
T  13906 tcctcggtagttaactgccgatgtttttctcggcagttaactgcagccgtgtttttaatttctcggcagttcactgccg 13984  T

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Target: scaffold0388; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 97
Target Start/End: Original strand, 11739 - 11796
Alignment:
Q  40 gcagttaactgcagtcgaatttctaattcttcggcagttaactgccgaagggacaaaa 97  Q
    |||||||||||||| ||  |||  |||||||| ||||||||||||||||||| |||||    
T  11739 gcagttaactgcagccggtttttgaattcttcagcagttaactgccgaaggggcaaaa 11796  T

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Target: scaffold0092 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 54641 - 54596
Alignment:
Q  8 tcctcggcagttaactcccgagattttcctcggcagttaactgcag 53  Q
    ||||||||||||||||  |||  |||||||||||||||||||||||    
T  54641 tcctcggcagttaactgtcgatgttttcctcggcagttaactgcag 54596  T

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Target: scaffold0268 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 15441 - 15489
Alignment:
Q  39 ggcagttaactgcagtcgaatttctaattcttcggcagttaactgccga 87  Q
    ||||||||||||| | || ||||||||| |||| |||||||||||||||    
T  15441 ggcagttaactgccgccggatttctaatacttcagcagttaactgccga 15489  T

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Target: scaffold0011 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 235969 - 235933
Alignment:
Q  14 gcagttaactcccgagattttcctcggcagttaactg 50  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  235969 gcagttaactaccgaggttttcctcggcagttaactg 235933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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