View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7996_low_24 (Length: 298)
Name: NF7996_low_24
Description: NF7996
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7996_low_24 |
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Alignment Details
Target: chr6 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 27773143 - 27773422
Alignment:
| Q |
1 |
acaaatggaggagaatttaatggtaacgtataaaaatatcataaaacattaatggtaagttgaattcctactggttgaggttaggaagtcacggtgttac |
100 |
Q |
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| T |
27773143 |
acaaatggaggagaatttaatgataacgtataaaaatatcataaaacattaatgataagttgaattcctactggttgaggttaggaagtcacggtgttac |
27773242 |
T |
|
| Q |
101 |
tgttagctatagctccgatggttcagcttttggtgtttgagtagttggaacttagaaaatacttatcatagaagtaatgagtagttgagctaataatctg |
200 |
Q |
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||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27773243 |
tgttagctatagctccgttggttcagcttttggtgtttgagtagttggaacttagaaaatacttatcatagaagtaatgagtagttgagctaataatctg |
27773342 |
T |
|
| Q |
201 |
tgccagttaaattttgagcctttccatgtgctgacttctgaatcactacactagtagtgtgtagaagctcatgttcatcc |
280 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
27773343 |
tgccagttaaattttgagcctttccatgtgctgacttctgaatcactacactagtagtgtgtagaagctcatgttcatcc |
27773422 |
T |
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