View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8004_low_1 (Length: 582)

Name: NF8004_low_1
Description: NF8004
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8004_low_1
NF8004_low_1
[»] chr1 (58 HSPs)
chr1 (121-435)||(16964902-16965220)
chr1 (219-435)||(15232775-15232990)
chr1 (152-435)||(49801640-49801920)
chr1 (157-304)||(46318435-46318582)
chr1 (246-422)||(45584913-45585089)
chr1 (349-435)||(15234048-15234134)
chr1 (197-433)||(48096890-48097122)
chr1 (153-321)||(14478401-14478570)
chr1 (200-321)||(48527669-48527790)
chr1 (199-321)||(52078003-52078125)
chr1 (197-321)||(9226071-9226196)
chr1 (255-433)||(16963859-16964034)
chr1 (128-341)||(51445707-51445918)
chr1 (153-341)||(5612897-5613082)
chr1 (195-416)||(44999315-44999535)
chr1 (199-422)||(15072647-15072870)
chr1 (189-432)||(35943295-35943537)
chr1 (179-322)||(9485149-9485286)
chr1 (290-435)||(49802846-49802988)
chr1 (260-321)||(13147336-13147397)
chr1 (125-321)||(46467281-46467477)
chr1 (198-309)||(13894760-13894872)
chr1 (281-341)||(34350228-34350288)
chr1 (197-316)||(10722233-10722352)
chr1 (153-341)||(26286530-26286715)
chr1 (219-313)||(26802083-26802178)
chr1 (283-422)||(16123323-16123460)
chr1 (260-321)||(3617417-3617478)
chr1 (183-321)||(6049267-6049406)
chr1 (121-230)||(23091569-23091679)
chr1 (153-301)||(24517428-24517578)
chr1 (178-305)||(40109509-40109638)
chr1 (202-294)||(7306116-7306209)
chr1 (248-321)||(15746675-15746747)
chr1 (349-422)||(24499662-24499735)
chr1 (197-309)||(10711935-10712047)
chr1 (234-321)||(18821632-18821720)
chr1 (197-316)||(46110421-46110543)
chr1 (265-312)||(9482599-9482646)
chr1 (248-341)||(41873879-41873969)
chr1 (219-432)||(50444577-50444788)
chr1 (283-422)||(14470892-14471029)
chr1 (347-433)||(51042348-51042433)
chr1 (248-301)||(12665945-12665998)
chr1 (198-294)||(27556431-27556527)
chr1 (323-422)||(52628854-52628953)
chr1 (157-254)||(42245778-42245872)
chr1 (244-321)||(27814427-27814504)
chr1 (239-316)||(46111395-46111472)
chr1 (281-321)||(23091487-23091527)
chr1 (248-312)||(28050465-28050529)
chr1 (252-422)||(41872612-41872780)
chr1 (153-295)||(51299441-51299584)
chr1 (349-422)||(15071378-15071451)
chr1 (121-166)||(16123587-16123632)
chr1 (248-313)||(51300168-51300233)
chr1 (393-422)||(52627551-52627580)
chr1 (394-422)||(34352008-34352036)
[»] chr3 (58 HSPs)
chr3 (152-435)||(10731940-10732222)
chr3 (120-435)||(53614053-53614366)
chr3 (152-435)||(35370936-35371212)
chr3 (152-435)||(26886295-26886576)
chr3 (154-435)||(41264468-41264746)
chr3 (152-415)||(27841518-27841783)
chr3 (154-422)||(3208520-3208788)
chr3 (151-341)||(34819094-34819285)
chr3 (198-420)||(53622700-53622910)
chr3 (244-422)||(38242419-38242596)
chr3 (121-432)||(53420342-53420655)
chr3 (153-311)||(46368953-46369110)
chr3 (349-435)||(27837943-27838029)
chr3 (349-435)||(53612894-53612980)
chr3 (188-422)||(53624210-53624441)
chr3 (153-341)||(49379819-49380005)
chr3 (153-321)||(13621055-13621223)
chr3 (239-316)||(10301074-10301151)
chr3 (239-308)||(10338886-10338955)
chr3 (349-434)||(35372165-35372250)
chr3 (235-314)||(14745095-14745174)
chr3 (241-316)||(3455526-3455600)
chr3 (235-422)||(42684912-42685097)
chr3 (260-431)||(10730912-10731080)
chr3 (248-341)||(12107887-12107979)
chr3 (349-422)||(18458664-18458737)
chr3 (330-435)||(26887543-26887648)
chr3 (201-294)||(37415157-37415252)
chr3 (255-321)||(48083362-48083428)
chr3 (198-294)||(44602901-44602997)
chr3 (153-242)||(50809563-50809652)
chr3 (153-242)||(50866210-50866299)
chr3 (153-301)||(53194425-53194573)
chr3 (198-342)||(21074137-21074280)
chr3 (197-302)||(24487176-24487280)
chr3 (349-422)||(50809457-50809530)
chr3 (349-422)||(50866332-50866405)
chr3 (379-435)||(41263661-41263717)
chr3 (255-432)||(38240932-38241105)
chr3 (199-290)||(54110143-54110233)
chr3 (303-422)||(18442288-18442401)
chr3 (303-422)||(19487362-19487475)
chr3 (350-432)||(37736089-37736171)
chr3 (274-315)||(11224776-11224817)
chr3 (153-242)||(50810719-50810808)
chr3 (349-422)||(50810841-50810914)
chr3 (349-422)||(50864950-50865023)
chr3 (153-242)||(50865056-50865145)
chr3 (219-295)||(11219588-11219664)
chr3 (330-422)||(34818122-34818214)
chr3 (155-242)||(43174593-43174679)
chr3 (234-312)||(7270467-7270546)
chr3 (349-432)||(18197173-18197256)
chr3 (232-294)||(28909498-28909561)
chr3 (394-433)||(36176559-36176598)
chr3 (323-382)||(53187634-53187693)
chr3 (394-423)||(3209983-3210012)
chr3 (165-270)||(40245745-40245852)
[»] chr2 (45 HSPs)
chr2 (152-435)||(18616817-18617099)
chr2 (152-435)||(29219408-29219689)
chr2 (152-435)||(29332707-29332988)
chr2 (152-435)||(1085198-1085479)
chr2 (151-422)||(17459289-17459565)
chr2 (154-432)||(42641672-42641950)
chr2 (154-422)||(32469184-32469452)
chr2 (219-422)||(43033118-43033319)
chr2 (125-341)||(34513336-34513551)
chr2 (153-341)||(8320871-8321064)
chr2 (250-432)||(11317277-11317458)
chr2 (349-435)||(18615539-18615625)
chr2 (353-435)||(29220887-29220969)
chr2 (353-435)||(29334186-29334268)
chr2 (197-341)||(4920916-4921057)
chr2 (248-422)||(6030377-6030550)
chr2 (349-435)||(34468981-34469067)
chr2 (153-275)||(35903719-35903844)
chr2 (153-321)||(28611066-28611233)
chr2 (347-435)||(44192451-44192539)
chr2 (349-435)||(6030628-6030714)
chr2 (248-341)||(11547776-11547868)
chr2 (197-321)||(43034336-43034451)
chr2 (248-304)||(35903659-35903715)
chr2 (330-435)||(1083011-1083116)
chr2 (123-321)||(34467641-34467848)
chr2 (154-432)||(28562620-28562899)
chr2 (349-431)||(6032321-6032403)
chr2 (270-422)||(11315969-11316118)
chr2 (377-435)||(44191159-44191217)
chr2 (248-341)||(34464086-34464176)
chr2 (157-238)||(7436685-7436766)
chr2 (148-321)||(7753334-7753507)
chr2 (273-314)||(16295150-16295191)
chr2 (349-422)||(17460691-17460764)
chr2 (391-430)||(249052-249091)
chr2 (232-295)||(7983590-7983653)
chr2 (377-432)||(12359714-12359769)
chr2 (232-314)||(30748621-30748704)
chr2 (125-321)||(34512947-34513149)
chr2 (244-294)||(23232330-23232380)
chr2 (251-288)||(16290705-16290742)
chr2 (221-313)||(25570753-25570846)
chr2 (178-308)||(30749161-30749293)
chr2 (394-422)||(7437813-7437841)
[»] chr6 (31 HSPs)
chr6 (153-435)||(17837639-17837920)
chr6 (153-435)||(29381542-29381823)
chr6 (152-435)||(5187433-5187715)
chr6 (152-435)||(18346563-18346843)
chr6 (153-435)||(23392237-23392520)
chr6 (255-435)||(29380214-29380391)
chr6 (182-422)||(7311565-7311804)
chr6 (153-341)||(11722903-11723090)
chr6 (255-435)||(23397270-23397447)
chr6 (349-435)||(17839146-17839232)
chr6 (349-435)||(6701403-6701489)
chr6 (323-435)||(6702852-6702963)
chr6 (349-435)||(2687253-2687339)
chr6 (283-435)||(32506969-32507119)
chr6 (349-435)||(2687931-2688017)
chr6 (349-435)||(29722686-29722772)
chr6 (273-423)||(12669758-12669906)
chr6 (153-321)||(11967351-11967523)
chr6 (349-435)||(5186591-5186677)
chr6 (377-435)||(12256619-12256677)
chr6 (153-242)||(232316-232405)
chr6 (344-422)||(232212-232288)
chr6 (153-228)||(1367567-1367642)
chr6 (393-432)||(27082195-27082234)
chr6 (349-422)||(15730036-15730110)
chr6 (394-432)||(34024116-34024154)
chr6 (153-242)||(233454-233543)
chr6 (377-422)||(233599-233644)
chr6 (349-422)||(6452320-6452393)
chr6 (349-422)||(6452518-6452591)
chr6 (220-313)||(7312923-7313016)
[»] chr7 (57 HSPs)
chr7 (121-435)||(13564020-13564332)
chr7 (154-432)||(32255015-32255290)
chr7 (152-435)||(22537582-22537862)
chr7 (161-435)||(22336002-22336274)
chr7 (152-432)||(11502235-11502512)
chr7 (154-422)||(43460636-43460903)
chr7 (152-341)||(46835791-46835980)
chr7 (192-321)||(44372864-44372994)
chr7 (192-321)||(44381720-44381850)
chr7 (153-422)||(47060288-47060555)
chr7 (330-435)||(13562845-13562950)
chr7 (248-373)||(40811405-40811529)
chr7 (197-321)||(43441481-43441605)
chr7 (248-432)||(3413558-3413740)
chr7 (235-314)||(35295841-35295920)
chr7 (198-321)||(16756006-16756128)
chr7 (244-341)||(39981434-39981529)
chr7 (197-341)||(41328336-41328478)
chr7 (323-435)||(22538829-22538941)
chr7 (281-422)||(40509675-40509814)
chr7 (249-341)||(46201249-46201338)
chr7 (322-435)||(24844284-24844397)
chr7 (200-321)||(30334503-30334622)
chr7 (291-433)||(11501205-11501344)
chr7 (349-432)||(3414841-3414924)
chr7 (281-422)||(22115105-22115244)
chr7 (349-435)||(22337378-22337463)
chr7 (121-341)||(25533306-25533523)
chr7 (248-321)||(669297-669369)
chr7 (198-422)||(47059144-47059371)
chr7 (244-311)||(2414890-2414957)
chr7 (283-422)||(41078792-41078930)
chr7 (197-294)||(48312202-48312300)
chr7 (233-421)||(47454374-47454559)
chr7 (248-422)||(40508414-40508586)
chr7 (288-422)||(32256344-32256475)
chr7 (349-432)||(24282983-24283065)
chr7 (349-422)||(43459491-43459564)
chr7 (232-295)||(4167609-4167672)
chr7 (248-422)||(4299956-4300128)
chr7 (263-321)||(15992270-15992328)
chr7 (349-422)||(45454074-45454147)
chr7 (349-431)||(40738845-40738928)
chr7 (394-433)||(45455424-45455463)
chr7 (233-316)||(47456276-47456359)
chr7 (153-295)||(26406283-26406425)
chr7 (394-432)||(30311521-30311559)
chr7 (360-433)||(534084-534157)
chr7 (360-433)||(537339-537412)
chr7 (349-422)||(32602969-32603042)
chr7 (377-422)||(33779119-33779164)
chr7 (349-422)||(47456382-47456455)
chr7 (255-295)||(10957070-10957110)
chr7 (394-422)||(11344543-11344571)
chr7 (377-432)||(24281100-24281156)
chr7 (391-435)||(24844399-24844443)
chr7 (394-422)||(30333321-30333349)
[»] chr5 (32 HSPs)
chr5 (152-435)||(30910764-30911048)
chr5 (152-422)||(30858982-30859252)
chr5 (152-422)||(22047768-22048038)
chr5 (151-422)||(39603889-39604158)
chr5 (154-316)||(36898791-36898957)
chr5 (178-432)||(22308636-22308889)
chr5 (152-341)||(11262509-11262705)
chr5 (197-341)||(1102736-1102877)
chr5 (153-321)||(9220270-9220441)
chr5 (261-435)||(30912084-30912255)
chr5 (248-422)||(27705223-27705396)
chr5 (248-435)||(33173867-33174053)
chr5 (182-301)||(4127089-4127214)
chr5 (219-341)||(15548354-15548478)
chr5 (182-305)||(13520640-13520764)
chr5 (248-422)||(8521291-8521461)
chr5 (248-357)||(1010274-1010379)
chr5 (201-316)||(10735903-10736018)
chr5 (197-422)||(325041-325265)
chr5 (241-316)||(1009325-1009399)
chr5 (244-321)||(324174-324251)
chr5 (349-422)||(39605476-39605549)
chr5 (203-268)||(11797395-11797461)
chr5 (197-295)||(223384-223484)
chr5 (322-422)||(22049116-22049216)
chr5 (232-295)||(7426799-7426862)
chr5 (227-285)||(17420474-17420531)
chr5 (349-431)||(22307535-22307617)
chr5 (148-248)||(22048942-22049043)
chr5 (393-433)||(20538078-20538118)
chr5 (255-295)||(28702729-28702769)
chr5 (394-422)||(30857836-30857864)
[»] chr4 (70 HSPs)
chr4 (152-435)||(7707611-7707893)
chr4 (151-418)||(2312295-2312558)
chr4 (152-435)||(23201869-23202150)
chr4 (156-321)||(44498596-44498762)
chr4 (199-422)||(6349407-6349633)
chr4 (244-432)||(52239903-52240090)
chr4 (153-341)||(56085465-56085650)
chr4 (221-354)||(27850816-27850951)
chr4 (248-422)||(1794447-1794621)
chr4 (153-422)||(27847714-27847979)
chr4 (349-435)||(10168790-10168876)
chr4 (178-435)||(13165519-13165774)
chr4 (153-341)||(26496122-26496308)
chr4 (194-315)||(34326868-34326989)
chr4 (197-309)||(36845557-36845669)
chr4 (250-389)||(15449984-15450122)
chr4 (248-435)||(33231412-33231597)
chr4 (349-430)||(33232704-33232785)
chr4 (153-341)||(1519929-1520114)
chr4 (197-341)||(40723345-40723484)
chr4 (197-316)||(52138648-52138769)
chr4 (349-435)||(54866638-54866723)
chr4 (248-422)||(6348191-6348362)
chr4 (197-342)||(26629908-26630049)
chr4 (252-422)||(42810115-42810283)
chr4 (198-316)||(49896441-49896560)
chr4 (248-435)||(50546929-50547114)
chr4 (298-422)||(1588045-1588169)
chr4 (281-435)||(4714042-4714195)
chr4 (197-422)||(1829789-1830009)
chr4 (182-321)||(19750135-19750275)
chr4 (182-321)||(19789531-19789671)
chr4 (261-422)||(7708710-7708868)
chr4 (255-422)||(11968547-11968713)
chr4 (255-321)||(4871629-4871695)
chr4 (349-435)||(10167448-10167534)
chr4 (232-341)||(28590795-28590904)
chr4 (198-294)||(23103866-23103962)
chr4 (161-423)||(37884098-37884358)
chr4 (197-295)||(38555134-38555234)
chr4 (349-422)||(50548230-50548303)
chr4 (379-435)||(23203990-23204046)
chr4 (349-432)||(53205490-53205573)
chr4 (237-342)||(53432179-53432281)
chr4 (153-305)||(41349339-41349493)
chr4 (232-312)||(7053321-7053402)
chr4 (198-294)||(45535207-45535303)
chr4 (349-435)||(54865128-54865213)
chr4 (349-433)||(42871120-42871204)
chr4 (229-312)||(56157384-56157468)
chr4 (248-340)||(8682756-8682845)
chr4 (349-422)||(2310959-2311032)
chr4 (349-422)||(4129029-4129102)
chr4 (148-258)||(392522-392633)
chr4 (248-423)||(1587217-1587390)
chr4 (229-312)||(36243663-36243747)
chr4 (393-432)||(393689-393728)
chr4 (351-422)||(42872308-42872379)
chr4 (349-422)||(1188879-1188952)
chr4 (349-422)||(37882870-37882943)
chr4 (153-210)||(40724729-40724786)
chr4 (349-422)||(40792787-40792860)
chr4 (349-417)||(49344016-49344085)
chr4 (349-422)||(53204397-53204470)
chr4 (248-321)||(53435661-53435734)
chr4 (394-422)||(390253-390281)
chr4 (394-422)||(27850984-27851012)
chr4 (255-295)||(35350024-35350064)
chr4 (235-295)||(38370441-38370501)
chr4 (255-295)||(39057683-39057723)
[»] chr8 (63 HSPs)
chr8 (152-422)||(32695087-32695355)
chr8 (219-435)||(13117511-13117726)
chr8 (156-321)||(24192478-24192644)
chr8 (244-435)||(42098586-42098776)
chr8 (154-422)||(32798344-32798612)
chr8 (192-321)||(20180525-20180655)
chr8 (153-422)||(42870849-42871119)
chr8 (181-301)||(17455202-17455322)
chr8 (446-564)||(30403897-30404013)
chr8 (121-432)||(8571394-8571707)
chr8 (197-341)||(9854735-9854878)
chr8 (349-435)||(17338064-17338150)
chr8 (248-422)||(45281096-45281268)
chr8 (322-435)||(13116353-13116466)
chr8 (232-423)||(4810504-4810691)
chr8 (323-435)||(17339530-17339642)
chr8 (248-432)||(44076269-44076453)
chr8 (197-342)||(31845652-31845793)
chr8 (248-357)||(42877720-42877825)
chr8 (255-435)||(42100022-42100199)
chr8 (154-309)||(40437409-40437565)
chr8 (198-432)||(6397809-6398041)
chr8 (248-321)||(10669353-10669426)
chr8 (349-432)||(211621-211704)
chr8 (349-432)||(240552-240635)
chr8 (349-432)||(725244-725327)
chr8 (349-432)||(793907-793990)
chr8 (239-341)||(43202214-43202313)
chr8 (235-422)||(26697728-26697912)
chr8 (248-422)||(32693866-32694037)
chr8 (241-316)||(42878732-42878806)
chr8 (257-322)||(42362668-42362732)
chr8 (270-389)||(42872120-42872236)
chr8 (248-340)||(14840807-14840896)
chr8 (153-305)||(22620035-22620191)
chr8 (244-340)||(38696427-38696520)
chr8 (148-295)||(6398323-6398471)
chr8 (349-422)||(28418842-28418915)
chr8 (351-422)||(32797174-32797245)
chr8 (248-294)||(37400942-37400988)
chr8 (121-166)||(22551298-22551343)
chr8 (233-321)||(24305177-24305266)
chr8 (248-321)||(30786812-30786885)
chr8 (349-432)||(212719-212802)
chr8 (349-432)||(239452-239535)
chr8 (349-432)||(726342-726425)
chr8 (349-432)||(792807-792890)
chr8 (349-432)||(798843-798926)
chr8 (235-302)||(13513571-13513638)
chr8 (235-302)||(13603104-13603171)
chr8 (377-432)||(23702983-23703038)
chr8 (377-432)||(23708784-23708839)
chr8 (235-422)||(22551043-22551227)
chr8 (244-294)||(32552457-32552507)
chr8 (349-422)||(6398504-6398577)
chr8 (349-422)||(26696568-26696641)
chr8 (153-242)||(28418948-28419037)
chr8 (349-422)||(28420181-28420254)
chr8 (248-296)||(14030478-14030526)
chr8 (148-192)||(37473703-37473747)
chr8 (148-192)||(37473811-37473855)
chr8 (148-192)||(37473919-37473963)
chr8 (238-294)||(39173277-39173333)
[»] scaffold0118 (1 HSPs)
scaffold0118 (152-422)||(43386-43655)
[»] scaffold0077 (2 HSPs)
scaffold0077 (151-422)||(53997-54265)
scaffold0077 (298-422)||(52628-52749)
[»] scaffold0031 (2 HSPs)
scaffold0031 (248-432)||(125138-125323)
scaffold0031 (184-422)||(124005-124240)
[»] scaffold0011 (1 HSPs)
scaffold0011 (197-321)||(127568-127692)
[»] scaffold0219 (1 HSPs)
scaffold0219 (153-341)||(8000-8188)
[»] scaffold2071 (1 HSPs)
scaffold2071 (121-321)||(461-662)
[»] scaffold0034 (1 HSPs)
scaffold0034 (245-341)||(108630-108725)
[»] scaffold0019 (2 HSPs)
scaffold0019 (124-432)||(62914-63221)
scaffold0019 (349-432)||(61877-61960)
[»] scaffold1152 (1 HSPs)
scaffold1152 (290-423)||(2426-2557)
[»] scaffold0201 (1 HSPs)
scaffold0201 (248-422)||(21163-21335)
[»] scaffold0013 (1 HSPs)
scaffold0013 (238-321)||(32705-32790)
[»] scaffold0472 (1 HSPs)
scaffold0472 (386-435)||(787-836)
[»] scaffold0128 (2 HSPs)
scaffold0128 (127-166)||(23047-23086)
scaffold0128 (246-316)||(22120-22190)
[»] scaffold0078 (1 HSPs)
scaffold0078 (349-422)||(18848-18921)


Alignment Details
Target: chr1 (Bit Score: 270; Significance: 1e-150; HSPs: 58)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 270; E-Value: 1e-150
Query Start/End: Original strand, 121 - 435
Target Start/End: Original strand, 16964902 - 16965220
Alignment:
Q  121 tgtgagttgaagatgatgaagatttataaggtagaa----gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttg 216  Q
    ||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||    
T  16964902 tgtgagttgaagatgatgaagatttataaggtagaaagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaatataaaatagacctg 16965001  T
Q  217 tgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 316  Q
     ||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16965002 cgtaatacaatggttctcttttaaaagaaaaaacaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 16965101  T
Q  317 tacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaa 416  Q
    |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16965102 tacatcatttggggttaaacttaaccatcggaatttatttgataaacggaagaaaatgtaagggactaaaacgtcatttttattaattgtgggaccaaaa 16965201  T
Q  417 tgaaaataagaaattaaat 435  Q
    |||||||||||||||||||    
T  16965202 tgaaaataagaaattaaat 16965220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 219 - 435
Target Start/End: Complemental strand, 15232990 - 15232775
Alignment:
Q  219 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatata 318  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  15232990 taatccaatggttctcttttaaaaaaaatatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccactatata 15232891  T
Q  319 catcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatg 418  Q
    |||||||| ||||||||||||||  |    |||||||||| |||| || |||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  15232890 catcattt-gggttaaacttaacggtcatgatttatttggcaaacagaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatg 15232792  T
Q  419 aaaataagaaattaaat 435  Q
    |||| | ||||||||||    
T  15232791 aaaacatgaaattaaat 15232775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 152 - 435
Target Start/End: Complemental strand, 49801920 - 49801640
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    |||||||||||||||| |||||| ||| || ||||||||||||||||||||||||||||||| ||  | |||||||||||| |||| | || ||||||||    
T  49801920 tagaagatgaagaaaatgaaaaaaatt-agatgttggtggtacatcgtaagataaaatagacctgcatgatccaatggttccctttaacaa-aaaaatca 49801823  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||| ||||||||||||||||||| || |||||||||||||| |||| ||||||  ||| || |||||||||| ||||||| |||| || | | |||    
T  49801822 aacggtttaaattaaaataattaatagaatttatggtggaccacttttaaggttggtttaccgtaaacatcatttgaggttaaaattaa-cagtcggatt 49801724  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||| |||| ||   ||| || |||||  ||||| |||||||||||||||||||||||||||||||||||  |||||||||    
T  49801723 tatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgtgggaccaaaatgaaaatataaaattaaat 49801640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 157 - 304
Target Start/End: Original strand, 46318435 - 46318582
Alignment:
Q  157 gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacgg 256  Q
    |||||||||||||||||| | |||||||||| ||||||||| ||||||||||||||| ||| ||||| ||||||||| ||  |||| ||| ||||||||     
T  46318435 gatgaagaaaaggaaaaaaagttaggtgttgctggtacatcataagataaaatagacatgtataatctaatggttcttttaaaaaaaaaagatcaaacga 46318534  T
Q  257 ttgaaattaaaataattaataggatctatggtggaccactcttaaagt 304  Q
    || ||||||||||| ||||||||||||||||||||||||||| |||||    
T  46318535 tttaaattaaaatatttaataggatctatggtggaccactctaaaagt 46318582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 246 - 422
Target Start/End: Original strand, 45584913 - 45585089
Alignment:
Q  246 aaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatt 345  Q
    |||||||||| || | |||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||| |||||||||||  |     
T  45584913 aaatcaaacgatttatattaaaataattaataggatctatggtggagcactcttaaagttgggccaccatagacatcatttgggtttaaacttaacggtc 45585012  T
Q  346 ggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     | |||||||||| ||||||| ||||| || | |||| |||| |    |||||||||||||| ||||||||||||||    
T  45585013 aggatttatttggcaaacggaggaaaaagtgaaggaccaaaaggtacgttttattaattgtgagaccaaaatgaaaa 45585089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 349 - 435
Target Start/End: Original strand, 15234048 - 15234134
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  15234048 atttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 15234134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 197 - 433
Target Start/End: Original strand, 48096890 - 48097122
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||| || | |||||||||||||| ||| |  |||| ||| |||||||| || | ||| ||||||||||||||||||||||| |||||||    
T  48096890 cgtaagataaaatacacctatgtaatccaatggtcctcgtaaaaaa-aaagatcaaacgattaatatttaaataattaataggatctatggtagaccact 48096988  T
Q  297 cttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttt 396  Q
    ||||| ||||||||||||||||   |||||| |||||||||||||  | || |||||||||    |||||   |||  ||||||||||||||   | |||    
T  48096989 cttaaggttggtccaccatata---catttgaggttaaacttaacagtagggatttatttgaccgacggagacaaacctaagggactaaaacatgagttt 48097085  T
Q  397 tattaattgtgggaccaaaatgaaaataagaaattaa 433  Q
    ||||| || |||||||||||| |||||  ||||||||    
T  48097086 tattagttatgggaccaaaataaaaattggaaattaa 48097122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 153 - 321
Target Start/End: Complemental strand, 14478570 - 14478401
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 251  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| || || ||||| |||||   ||| |||||||| ||||||||    
T  14478570 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacacctgcgtaattcaatgaccctccttttaaaaaaaaaatca 14478471  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||||| |||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||    
T  14478470 aacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat 14478401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 200 - 321
Target Start/End: Complemental strand, 48527790 - 48527669
Alignment:
Q  200 aagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactctt 299  Q
    ||||||||||| |||||  ||||||||||||  || ||||||| ||| ||||||| ||| |||||||||||||| ||| |||||||||||||||||||||    
T  48527790 aagataaaatacacttgcataatccaatggtcatcatttaaaaaaaagatcaaacagtttaaattaaaataattgataagatctatggtggaccactctt 48527691  T
Q  300 aaagttggtccaccatatacat 321  Q
    |||||||||| |||||| ||||    
T  48527690 aaagttggtcgaccatagacat 48527669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 199 - 321
Target Start/End: Original strand, 52078003 - 52078125
Alignment:
Q  199 taagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactct 298  Q
    |||||||||||| ||||  |||||| |||||| ||| |||  || ||||||||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  52078003 taagataaaatacacttacgtaatctaatggtcctcctttttaaaaaaaatcaaacggttaaaattaaaataattaataggatctatggtgtatcactct 52078102  T
Q  299 taaagttggtccaccatatacat 321  Q
    ||| |||||| ||||||| ||||    
T  52078103 taaggttggttcaccatagacat 52078125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 9226071 - 9226196
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    ||||||||||||||||| || || ||  |||||||||||||||| | |||| |||||||  || ||||||||||||||||||||||||||||||||||||    
T  9226071 cgtaagataaaatagacatgcgtgatttaatggttctcttttaataaaaaagatcaaacaatttaaattaaaataattaataggatctatggtggaccac 9226170  T
Q  296 tcttaaagttggtccaccatatacat 321  Q
    | |||| |||| ||||||||| ||||    
T  9226171 ttttaaggttgatccaccatagacat 9226196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 255 - 433
Target Start/End: Complemental strand, 16964034 - 16963859
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 354  Q
    |||| ||||||| | |||||||| | |||||| ||||||||| |||| ||||||||| |||| ||||   || | |||||| |||||  |  | ||||||    
T  16964034 ggttaaaattaacaaaattaataaggtctatgatggaccacttttaaggttggtccatcataaacat---ttagagttaaagttaacagtcagcatttat 16963938  T
Q  355 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaa 433  Q
    |||| ||||||| |||||  | |||||||||||| ||||||||||||||||||||||||||||||||| | ||||||||    
T  16963937 ttggcaaacggaggaaaagatgagggactaaaacaccatttttattaattgtgggaccaaaatgaaaacatgaaattaa 16963859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 128 - 341
Target Start/End: Complemental strand, 51445918 - 51445707
Alignment:
Q  128 tgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaat 227  Q
    |||||||||||||||    | ||| |||||||||||||| ||| ||  | |||| ||||| ||   || |||||||||||||| || || ||||||||||    
T  51445918 tgaagatgatgaagaagggtgaggaagaagatgaagaaagggagaattaattagttgttgttgactcaccgtaagataaaatacacctgcgtaatccaat 51445819  T
Q  228 ggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttg 327  Q
    |   ||| | |  || ||||||||||||||| |||||| |||||||||||||||||||||||||||| | ||||||||| ||||||||| ||||  || |    
T  51445818 gaccctcctgtttaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggaccatttttaaagttgatccaccatagacat--ttgg 51445721  T
Q  328 gggttaaacttaac 341  Q
    |||||||| |||||    
T  51445720 gggttaaagttaac 51445707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 153 - 341
Target Start/End: Original strand, 5612897 - 5613082
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 251  Q
    |||||||||||||| ||| | | | ||| |||||| || | || | |||||||||||| ||||  |||||| ||||||  || ||||||||  | |||||    
T  5612897 agaagatgaagaaagggagacataattaagtgttgttgattcaccataagataaaatacacttacgtaatctaatggtcatccttttaaaaatataatca 5612996  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||||| || |||||||||   | |||||||||||||| |||||    
T  5612997 aacggtttaaattaaaataattaataggatctatggtggatcact-ttaaaggtgatccaccata---aacatttggggttaaagttaac 5613082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 195 - 416
Target Start/End: Original strand, 44999315 - 44999535
Alignment:
Q  195 atcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa--tcaaacggttgaaattaaaataattaataggatctatggtggac 292  Q
    ||||||||||| |||||||||| |||||||||||||  |||||| ||| || ||  ||||| |||| || ||||||||||||||| ||||||||||| ||    
T  44999315 atcgtaagatataatagacttgcgtaatccaatggtcatcttttgaaaaaacaagatcaaatggtttaagttaaaataattaataagatctatggtgaac 44999414  T
Q  293 cactcttaaagttggtccaccatatacatcatttggggttaaacttaac-cattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgcc 391  Q
    ||||||||   ||||||||||||| |   |||||  ||||||| |||||   | || |||||||||| |||| || |||||  | | |||| ||||||||    
T  44999415 cactcttacgattggtccaccataga---catttaaggttaaagttaacagctagggatttatttggcaaacagaggaaaaaatga-ggacgaaaacgcc 44999510  T
Q  392 atttttattaattgtgggaccaaaa 416  Q
    | |||||||||||||||||| ||||    
T  44999511 aattttattaattgtgggactaaaa 44999535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 199 - 422
Target Start/End: Original strand, 15072647 - 15072870
Alignment:
Q  199 taagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa--tcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    ||||||||||||||| ||||||||| || ||||  ||||||| | |||||  ||||||  || ||||||| | |||||||||  |||| |||||||||||    
T  15072647 taagataaaatagacctgtgtaatcaaagggttaccttttaataaaaaaagatcaaacaatttaaattaagaaaattaatagagtctacggtggaccact 15072746  T
Q  297 cttaaagttggtccaccatatacatcatttggggttaaacttaac---cattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccat 393  Q
    ||| | |||||||||||||| |   |||||| ||||||| |||||   |||  | |||||||||| ||||||| |||||  |||||||| |||| |        
T  15072747 ctttaggttggtccaccataga---catttgaggttaaagttaacagacat--ggatttatttggcaaacggaggaaaaaataagggaccaaaatgtacg 15072841  T
Q  394 ttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||||||||||||||    
T  15072842 ttttattaattgtgggaccaaaatgaaaa 15072870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 189 - 432
Target Start/End: Original strand, 35943295 - 35943537
Alignment:
Q  189 tggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacgg-ttgaaattaaaataattaataggatctatgg 287  Q
    |||| |||||||||||||||||||| || ||||| |||||||  || ||| ||| ||| ||||||||| || ||| ||||| | |||||| | |||||||    
T  35943295 tggttcatcgtaagataaaatagacctgcgtaattcaatggtcatcctttcaaaaaaagatcaaacggttttaaaataaaaaatttaataaggtctatgg 35943394  T
Q  288 tggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac--cattggaatttatttggtaaacggaagaaaatgtaagggactaa 385  Q
    |||| ||||||||| |||||||||||||| |   ||||| ||||||||||||||  |   || |||||||||| ||||| | ||||| || | |||| ||    
T  35943395 tggatcactcttaaggttggtccaccataga---catttagggttaaacttaacagccaggggatttatttggcaaacgaaggaaaaagtga-ggaccaa 35943490  T
Q  386 aacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    || |    |||||||||||||||||||||||| |||||  |||||||    
T  35943491 aatgtacgttttattaattgtgggaccaaaataaaaatttgaaatta 35943537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 179 - 322
Target Start/End: Original strand, 9485149 - 9485286
Alignment:
Q  179 taggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaatag 278  Q
    |||||||||||||||||||||||||||||||| || || ||||  ||| |||  ||||| ||||  |||||| |    || |||||||||||||||||||    
T  9485149 taggtgttggtggtacatcgtaagataaaataaacatgcgtaactcaaaggtaatctttaaaaa--aaaatcga----tttaaattaaaataattaatag 9485242  T
Q  279 gatctatggtggaccactcttaaagttggtccaccatatacatc 322  Q
    ||| ||||||  |||||||||||||||| ||||||||| |||||    
T  9485243 gatttatggttaaccactcttaaagttgatccaccatagacatc 9485286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 290 - 435
Target Start/End: Original strand, 49802846 - 49802988
Alignment:
Q  290 gaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacg 389  Q
    ||||||| |||| |||||| ||||||| ||||   || | ||| || |||||| | || |||||||||| |||||||  ||||  | |||||||||||||    
T  49802846 gaccacttttaaggttggtacaccatagacat---ttagagttgaagttaaccgtcgggatttatttggcaaacggagaaaaagatgagggactaaaacg 49802942  T
Q  390 ccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
     |||||||||||||||||||||||||||||||| | ||||||||||    
T  49802943 tcatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 49802988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 13147336 - 13147397
Alignment:
Q  260 aaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||    
T  13147336 aaattaaaataattaataggatctatggtggaccactattaaggttggtccaccatagacat 13147397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 125 - 321
Target Start/End: Complemental strand, 46467477 - 46467281
Alignment:
Q  125 agttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatcc 224  Q
    ||||||||||||||||||||  ||||||||||||||||||||   | ||| | |||| ||||| |||| || |||||| || |||||||  || |||| |    
T  46467477 agttgaagatgatgaagattagtaaggtagaagatgaagaaagaaagaaagaattagttgttgttggtgcaccgtaagttacaatagacacgtataattc 46467378  T
Q  225 aatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||||  || ||||| || | | ||||||||||| ||||||||| | ||||||  ||||| |||||| |||| |||| |||||||||||||| ||||    
T  46467377 aatggtcatctttttagaaaatatatcaaacggtttaaattaaaa-atttaataacatctacggtggatcacttttaatgttggtccaccatagacat 46467281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 198 - 309
Target Start/End: Complemental strand, 13894872 - 13894760
Alignment:
Q  198 gtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    ||||||||||||| || || ||||| |||||||| | | ||||||| ||| ||||||||||| |||||||||||||||| |||||||||||| ||| |||    
T  13894872 gtaagataaaatacacatgcgtaattcaatggtttttcatttaaaaaaaagatcaaacggtttaaattaaaataattaacaggatctatggtagacaact 13894773  T
Q  297 cttaaagttggtc 309  Q
    ||| | |||||||    
T  13894772 ctttaggttggtc 13894760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 281 - 341
Target Start/End: Complemental strand, 34350288 - 34350228
Alignment:
Q  281 tctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||||||||||||||||| |||| ||||||||| ||||||||||||||||||||||||    
T  34350288 tctatggtggaccactcttaaggttgatccaccatagacatcatttggggttaaacttaac 34350228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 10722233 - 10722352
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||| || | ||||||| |||||||||| ||| |||  |||||| || |||| ||||||||| ||||| ||| ||||||| |||||||||    
T  10722233 cgtaagataaaataaacctatgtaatctaatggttctcattttaaaataaaatctaaaggtttaaattaaaaaaattagtagaatctatgatggaccact 10722332  T
Q  297 cttaaagttggtccaccata 316  Q
    ||| | ||||||||| ||||    
T  10722333 ctttaggttggtccatcata 10722352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 153 - 341
Target Start/End: Complemental strand, 26286715 - 26286530
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 251  Q
    |||||||||||||| ||| | | | |||||| ||| || | || |||| ||||||||| ||||  |||||| ||||||  || ||||||||  | |||||    
T  26286715 agaagatgaagaaagggagacataattaggttttgttgattcaccgtacgataaaatacacttacgtaatctaatggtcatccttttaaaaatataatca 26286616  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||| |||||| || |||||||||   | |||||||||||||| |||||    
T  26286615 aacggtttaaattaaaataattaatagagtctatggtggatcact-ttaaaggtgatccaccata---aacatttggggttaaagttaac 26286530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 219 - 313
Target Start/End: Complemental strand, 26802178 - 26802083
Alignment:
Q  219 taatccaatggttctcttttaaaagaaa-aatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 313  Q
    ||||| |||||| ||||||||||| ||| |||||||||||| |||||||||| ||||||| ||||||| |||||| |||||||| |||||| ||||    
T  26802178 taatcaaatggtcctcttttaaaaaaaataatcaaacggtttaaattaaaatgattaatatgatctatagtggacaactcttaaggttggttcacc 26802083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 283 - 422
Target Start/End: Complemental strand, 16123460 - 16123323
Alignment:
Q  283 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatt-ggaatttatttggtaaacggaagaaaatgtaaggga 381  Q
    ||||||||| |||| |||||||||||| |||||| ||||   ||| | ||||||||||| |   || |||||||||| |||||||||||||  | |||||    
T  16123460 tatggtggatcacttttaaagttggtctaccatagacat---ttgagattaaacttaacaaccagggatttatttggcaaacggaagaaaaaatgaggga 16123364  T
Q  382 ctaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||||  | ||||||||||||||| |||||||||||||    
T  16123363 ctaaaacgtgaattttattaattgtggaaccaaaatgaaaa 16123323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 260 - 321
Target Start/End: Original strand, 3617417 - 3617478
Alignment:
Q  260 aaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||| ||||    
T  3617417 aaattaaaataattaataggatctatagtggaccactcttaaggttggttcaccatagacat 3617478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 183 - 321
Target Start/End: Original strand, 6049267 - 6049406
Alignment:
Q  183 tgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggat 281  Q
    ||||| |||| ||| |||||||| | ||||| ||  | ||| |||||| ||||||||| | |||| ||||| ||||| |||||||||||||||| |||||    
T  6049267 tgttgttggttcattgtaagatacagtagacatgcatgatctaatggtcctcttttaataaaaaatatcaatcggtttaaattaaaataattaacaggat 6049366  T
Q  282 ctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||| ||||||||||| || |  ||||||||||||| ||||    
T  6049367 ctacggtggaccactatttagattggtccaccatagacat 6049406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 121 - 230
Target Start/End: Complemental strand, 23091679 - 23091569
Alignment:
Q  121 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaagga-aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 219  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||   | |||| | |||| ||||| |||||||||||||| || |||||||  || |    
T  23091679 tgtgagttgaagatgatgaagattattaaggtagaagatgaagaaagaaataaaagaattagttgttgttggtacatcgtaagttacaatagacacgtat 23091580  T
Q  220 aatccaatggt 230  Q
    ||| |||||||    
T  23091579 aattcaatggt 23091569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 301
Target Start/End: Original strand, 24517428 - 24517578
Alignment:
Q  153 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatc 250  Q
    ||||||||||||||| | | ||| | |||||||||| |||| || | | ||||| ||||||| ||  ||||| |||||| ||||||| ||| ||| ||||    
T  24517428 agaagatgaagaaaatgtacaaaaaattaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctctttttaaaaaaataatc 24517527  T
Q  251 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaa 301  Q
    |||||||| |||| ||||| ||||||| ||||||| |||||| ||||||||    
T  24517528 aaacggtttaaataaaaatgattaatatgatctatagtggacaactcttaa 24517578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 178 - 305
Target Start/End: Complemental strand, 40109638 - 40109509
Alignment:
Q  178 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa--atcaaacggttgaaattaaaataattaa 275  Q
    |||||||||| |||| || | | ||||| ||||||| ||  ||||| |||||| ||||||| ||| ||||  ||||||||||| |||| ||||| |||||    
T  40109638 ttaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctctttttaaaaaaaataatcaaacggtttaaataaaaatgattaa 40109539  T
Q  276 taggatctatggtggaccactcttaaagtt 305  Q
    || ||||||| |||||| ||||||||||||    
T  40109538 tatgatctatagtggacaactcttaaagtt 40109509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 202 - 294
Target Start/End: Original strand, 7306116 - 7306209
Alignment:
Q  202 gataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    |||||||||||  ||||||||| | |||| ||||||||||| ||| ||||||| || | ||||||||| |||||||| ||||||||||||||||    
T  7306116 gataaaatagaaatgtgtaatcaattggtcctcttttaaaaaaaacaatcaaatggctaaaattaaaagaattaataagatctatggtggacca 7306209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 15746675 - 15746747
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||||| |||| ||||||||| | ||||||||||||||||||||||||||||||  ||||||||||||| ||||    
T  15746675 atcaaagggttaaaattaaaaga-ttaataggatctatggtggaccactcttaagattggtccaccatagacat 15746747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 24499662 - 24499735
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||| ||||| || |||||| ||||||  | |||||||||||||| ||||||||||||||    
T  24499662 atttatttggtaaacggaggaaaaagtgagggaccaaaacgtgagttttattaattgtgagaccaaaatgaaaa 24499735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 10712047 - 10711935
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||| || | ||||||| |||||||||| ||| |||  |||||| || |||| ||||||||| ||||| ||| || |||| |||||||||    
T  10712047 cgtaagataaaataaacctatgtaatctaatggttctcattttaaaataaaatctaaaggtttaaattaaaaaaattagtagaatttatgatggaccact 10711948  T
Q  297 cttaaagttggtc 309  Q
    ||| | |||||||    
T  10711947 ctttaggttggtc 10711935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 18821632 - 18821720
Alignment:
Q  234 cttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||||||| |||| ||||||||||| || || ||| |||||||||||||| |||| |||||||||||| ||| |||||||||| ||||    
T  18821632 cttttaaaacaaaagatcaaacggttaaattttaaaaaattaataggatctttggtagaccactcttaaggttagtccaccatagacat 18821720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 197 - 316
Target Start/End: Complemental strand, 46110543 - 46110421
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctct---tttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacc 293  Q
    ||||||||| ||||||||||| | ||| || ||| | ||   ||||||| ||| ||||||||||| ||||||| | |||||||| | |||| | ||||||    
T  46110543 cgtaagatataatagacttgtatgatctaacggtccactttctttaaaaaaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggacc 46110444  T
Q  294 actcttaaagttggtccaccata 316  Q
    |||||||| ||||||||||||||    
T  46110443 actcttaaggttggtccaccata 46110421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 265 - 312
Target Start/End: Complemental strand, 9482646 - 9482599
Alignment:
Q  265 aaaataattaataggatctatggtggaccactcttaaagttggtccac 312  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||    
T  9482646 aaaataattaataagatctatggtgaaccactcttaaagttggtccac 9482599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 341
Target Start/End: Original strand, 41873879 - 41873969
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||||||| ||||| ||| |||||||    ||||||||||||||||||||| |||||||||||||| |   |||||| |||||||||||||    
T  41873879 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactcttaaggttggtccaccataga---catttgtggttaaacttaac 41873969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 219 - 432
Target Start/End: Original strand, 50444577 - 50444788
Alignment:
Q  219 taatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatat 317  Q
    |||||||||| |  |||||||||| |||| ||||||||||| |||| || | |||||||| | |||| | ||||| |||||||| ||||||||| ||||     
T  50444577 taatccaatgatcatcttttaaaacaaaagatcaaacggttaaaatgaacaaaattaataaggtctacgatggac-actcttaaggttggtccaacatag 50444675  T
Q  318 acatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaat 417  Q
    || |  ||||| |||||| |||||  || | |||||||||| || |||| |||||  | |||||| |||| |    |||||||||||||||||| |||||    
T  50444676 acgt--tttggagttaaagttaacggtttggatttatttggcaatcggaggaaaaaatgagggaccaaaatgtacgttttattaattgtgggactaaaat 50444773  T
Q  418 gaaaataagaaatta 432  Q
    ||||||  |||||||    
T  50444774 gaaaatttgaaatta 50444788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 283 - 422
Target Start/End: Complemental strand, 14471029 - 14470892
Alignment:
Q  283 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac-cattggaatttatttggtaaacggaagaaaatgtaaggga 381  Q
    ||||||||||||||||||| |||||||||| ||| || |   ||||||||||||||||| |    | |||||||||| ||||| | ||||| || |||||    
T  14471029 tatggtggaccactcttaaggttggtccactatagacgt---ttggggttaaacttaacaccgaaggatttatttggcaaacgaaggaaaaagtgaggga 14470933  T
Q  382 ctaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    || || ||    |||||||||||||||||||||||||||||    
T  14470932 cttaaccgtacgttttattaattgtgggaccaaaatgaaaa 14470892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 347 - 433
Target Start/End: Original strand, 51042348 - 51042433
Alignment:
Q  347 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaa 433  Q
    |||||||||||| ||||||| |||||    |||||||||||||  | ||||||||||||||||||||||||||||||  ||||||||    
T  51042348 gaatttatttggcaaacgga-gaaaaaaagagggactaaaacgtgagttttattaattgtgggaccaaaatgaaaattggaaattaa 51042433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 248 - 301
Target Start/End: Complemental strand, 12665998 - 12665945
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaa 301  Q
    ||||||||||| ||||||| | |||||||| |||||||||||||||||||||||    
T  12665998 atcaaacggtttaaattaacaaaattaataagatctatggtggaccactcttaa 12665945  T

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Target: chr1; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 198 - 294
Target Start/End: Complemental strand, 27556527 - 27556431
Alignment:
Q  198 gtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||||||||||  |  ||||||||| ||| | ||||||||  ||| ||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  27556527 gtaagataaaatagacacgcttaatccaatagttattcttttaaattaaagatcaaactgtttaaattaaaa-aattaataggatctatggtggacca 27556431  T

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Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 323 - 422
Target Start/End: Original strand, 52628854 - 52628953
Alignment:
Q  323 atttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||||  |||  |||||||||| ||||||| |||||  | |||||| |||| |    |||||||||||||||||||||||| ||||    
T  52628854 atttggggttaaacttaacggttgagatttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaattaaaa 52628953  T

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Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 42245778 - 42245872
Alignment:
Q  157 gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaac 254  Q
    ||||||||||||| |||| | |||| |||||||||||||| |||| ||||||||||||  |||||| ||||||| ||| ||||| | ||| |||||||    
T  42245778 gatgaagaaaagggaaaaaaattagatgttggtggtacat-gtaaaataaaatagact--tgtaattcaatggtcctcctttaacaaaaagatcaaac 42245872  T

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Target: chr1; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 27814504 - 27814427
Alignment:
Q  244 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||||| |||||||| ||||||| | |||||||| | | || | ||||||||| ||||||||||||||||||| ||||    
T  27814504 aaaaatgaaacggttaaaattaacaaaattaataaggtttacgatggaccacttttaaagttggtccaccatagacat 27814427  T

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Target: chr1; HSP #49
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 239 - 316
Target Start/End: Original strand, 46111395 - 46111472
Alignment:
Q  239 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 316  Q
    |||| ||||||||||| ||| | ||||| | |||||||| |||||||  ||||||||| ||||||||| |||||||||    
T  46111395 aaaaaaaaaatcaaacagttaagattaacacaattaataagatctatcatggaccacttttaaagttgatccaccata 46111472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 281 - 321
Target Start/End: Complemental strand, 23091527 - 23091487
Alignment:
Q  281 tctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  23091527 tctatggtggaccacttttaaagttggtccaccatagacat 23091487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 312
Target Start/End: Complemental strand, 28050529 - 28050465
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 312  Q
    ||||||||||| || |||| | ||| |||||||||||||||||| |||||||||  |||||||||    
T  28050529 atcaaacggttaaagttaagaaaatcaataggatctatggtggaacactcttaagattggtccac 28050465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 252 - 422
Target Start/End: Complemental strand, 41872780 - 41872612
Alignment:
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac--cattggaa 349  Q
    ||||||| ||||||||| | |||||| | ||||||||| || | ||||||  ||||| ||||||| ||||  || |||||||||||||||  || ||  |    
T  41872780 aacggtttaaattaaaaaatttaataaggtctatggtgaactaatcttaagattggttcaccatagacat--ttgggggttaaacttaacaccaatg--a 41872685  T
Q  350 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||||| ||||||| ||||| || || |||| |||||    |||||||||||||  || |||||||||||    
T  41872684 tttatttggcaaacggaggaaaaagtgagagacttaaacgtacgttttattaattgtatgatcaaaatgaaaa 41872612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 295
Target Start/End: Complemental strand, 51299584 - 51299441
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 251  Q
    |||||||||||||| || |||| ||||| ||||||||| | ||  |||||||| |||||||  |  | |||||||| ||||| |||||||  ||| ||||    
T  51299584 agaagatgaagaaaggggaaaaaatttaagtgttggtgattcactgtaagatacaatagaccagcatgatccaatgattctcattttaaataaaagatca 51299485  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    || |||| |||||||||   || ||| | |||||||||||||||    
T  51299484 aagggtttaaattaaaaagttttataaggtctatggtggaccac 51299441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 15071451 - 15071378
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||| ||||| || |||||| |||||     ||||||||||| || ||||||||||||||    
T  15071451 atttatttggtaaacggaggaaaaagtgagggaccaaaacatacgttttattaattatgtgaccaaaatgaaaa 15071378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 16123632 - 16123587
Alignment:
Q  121 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaa 166  Q
    |||||||||||||||||||||||   |||||||||||| |||||||    
T  16123632 tgtgagttgaagatgatgaagatcggtaaggtagaagacgaagaaa 16123587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 313
Target Start/End: Original strand, 51300168 - 51300233
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 313  Q
    |||||| |||| ||||| | | |||||||| | |||||||||||||||| |||| |||||||||||    
T  51300168 atcaaatggttaaaattcataaaattaataaggtctatggtggaccacttttaatgttggtccacc 51300233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 393 - 422
Target Start/End: Complemental strand, 52627580 - 52627551
Alignment:
Q  393 tttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||||||||||||||||||||||||||    
T  52627580 tttttattaattgtgggaccaaaatgaaaa 52627551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 422
Target Start/End: Original strand, 34352008 - 34352036
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||||||||||||||    
T  34352008 ttttattaattgtgggaccaaaatgaaaa 34352036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 192; Significance: 1e-104; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 152 - 435
Target Start/End: Original strand, 10731940 - 10732222
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    ||||||||||||||||||||||| | ||||||||||||| ||| || ||||||||||||||||||  ||||||||||||||| | |||||||||||||||    
T  10731940 tagaagatgaagaaaaggaaaaaaaattaggtgttggtgatacttcttaagataaaatagacttgcctaatccaatggttctttgttaaaagaaaaatca 10732039  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    |||||| ||||||||||||||||||||||||||||||||||| |||| || |||||||||||||| ||||||||| ||||||||||||||| | ||||||    
T  10732040 aacggtcgaaattaaaataattaataggatctatggtggaccgctctaaaggttggtccaccatagacatcattt-gggttaaacttaaccgtcggaatt 10732138  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||    
T  10732139 tatttggtaaacggaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatgaaaacaataaattaaat 10732222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 120 - 435
Target Start/End: Original strand, 53614053 - 53614366
Alignment:
Q  120 gtgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 219  Q
    |||||||||||||||||||||||||  ||| | |||||||||||||| ||||||  ||| |||||||||| ||||||| |||| |||||||  | ||| |    
T  53614053 gtgtgagttgaagatgatgaagattattaaaggagaagatgaagaaagggaaaataatt-aggtgttggtagtacatcataagctaaaataagcatgtct 53614151  T
Q  220 aatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatac 319  Q
    |||| |||||||||||||| ||| || |||| ||||||||||||||||||||||| |||||||||||||||||||||||||| | || ||||||||| ||    
T  53614152 aatctaatggttctctttttaaaaaataatctaacggttgaaattaaaataattactaggatctatggtggaccactcttaaggatgatccaccatagac 53614251  T
Q  320 atcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatga 419  Q
    || |||||||||||||||||||   ||| |||||||||| |||  || |||||||| |||||||||||||||| |||||||||||||||||||||||| |    
T  53614252 attatttggggttaaacttaacgcctgg-atttatttggcaaatagaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaataa 53614350  T
Q  420 aaataagaaattaaat 435  Q
    ||| ||||||||||||    
T  53614351 aaacaagaaattaaat 53614366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 152 - 435
Target Start/End: Complemental strand, 35371212 - 35370936
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt-aaaagaaaaatc 250  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| |||| |||||||    
T  35371212 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacttgcctaatccaatggttctctttttaaaaaaaaaatc 35371114  T
Q  251 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 350  Q
    |||  ||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| ||| |||||||||||       |    
T  35371113 aaaaagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcattt-gggctaaacttaacc------gt 35371021  T
Q  351 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
     ||||||  |||| || ||||| || | |||||||||| ||||||||||||||||||||| ||||||||||| | ||||||||||    
T  35371020 ctatttgacaaacagaggaaaaggtgaaggactaaaacaccatttttattaattgtgggatcaaaatgaaaacatgaaattaaat 35370936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 140; E-Value: 5e-73
Query Start/End: Original strand, 152 - 435
Target Start/End: Complemental strand, 26886576 - 26886295
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    |||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||| ||  |||||||||||||| ||||||||| ||||||||    
T  26886576 tagaagatgaagaaaatgaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacatgcataatccaatggttcccttttaaaaaaaaaatca 26886478  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||| |||||||||||||||||||||| ||||||||||||||||||| |||||| |||| || |||||||||| |||| || |||| || | | |||    
T  26886477 aacggtttaaattaaaataattaataggatttatggtggaccactcttaaggttggttcaccgtaaacatcatttgaggttgaaattaa-cagtcggatt 26886379  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||| |||| ||   ||| || |||||  ||||| |||||||||||||||||  |||||||||||||||| ||||||||||    
T  26886378 tatttggcaaacagagacaaacgtgagggatcaaaacaccatttttattaattgttagaccaaaatgaaaatatgaaattaaat 26886295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 154 - 435
Target Start/End: Original strand, 41264468 - 41264746
Alignment:
Q  154 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 253  Q
    ||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||| ||| ||||||||||    
T  41264468 gaagatgaagaaaagaaaaaaa--ttaggtgttggtggtacatcgtaagataaaatagacctgcttaattcaatggttctctttttaaaaaaaaatcaaa 41264565  T
Q  254 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattta 353  Q
    |||| ||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||    |||||||||||  |||  |||||    
T  41264566 cggtcgaaattaaaataattaataggatctatggtgtaccactcttaaagatgatccaccataaacatcattt-ttattaaacttaacggttgagattta 41264664  T
Q  354 tttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||| |||||||  |||| || |||||  ||||||||||||||||||| |||| |||||||||||||| | ||||||||||    
T  41264665 tttggcaaacggagaaaaaggtgagggatcaaaacgccatttttattaaatgtgagaccaaaatgaaaacatgaaattaaat 41264746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 152 - 415
Target Start/End: Original strand, 27841518 - 27841783
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaaga--aaaa 248  Q
    |||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||||||        ||||    
T  27841518 tagaagatgaagaaaaagaaaaaaaaattaggtgttggtggtacatcgtaagataaaatagacttgcctaatccaatagttctcttttttttttttaaaa 27841617  T
Q  249 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgga 348  Q
    |||||| ||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||| ||||  | |||||||||||||| |||    
T  27841618 tcaaacagttaaaattaaaataattattaggatctatggtggaccactcttaaggttggtccaccataaacataattt-agattaaacttaaccatcgga 27841716  T
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaa 415  Q
    |||||||||  ||||| ||||||| || | ||||||||| || ||||||||||||||||||||||||    
T  27841717 atttatttgacaaacgaaagaaaaggtgaaggactaaaaagctatttttattaattgtgggaccaaa 27841783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 115; E-Value: 4e-58
Query Start/End: Original strand, 154 - 422
Target Start/End: Complemental strand, 3208788 - 3208520
Alignment:
Q  154 gaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaaga-aaaatca 251  Q
    ||||||||||||||||||||| |  |||||||||| ||||||||||||||||||| ||||||||  || |||||||||||| |||| ||| | |||||||    
T  3208788 gaagatgaagaaaaggaaaaaaaaattaggtgttgatggtacatcgtaagataaattagacttgccta-tccaatggttctatttttaaaaataaaatca 3208690  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||| |||||| ||||||||||||||| ||||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||  |  | |||    
T  3208689 aacggtttaaattataataattaataggatttatggtggaccactcttaaggttggtccaccata-atatcatttggggttaaacttaacggtaaggatt 3208591  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||  ||||||| |||||  |||||||  ||||||    ||||||||||| |||||||||||||||||    
T  3208590 tatttgacaaacggaggaaaaaataagggatcaaaacgtacgttttattaattatgggaccaaaatgaaaa 3208520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 151 - 341
Target Start/End: Original strand, 34819094 - 34819285
Alignment:
Q  151 gtagaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaat 249  Q
    |||||||||||||||||| ||||| |  |||||||||||||||||| | ||||||||||||||||||  ||||||||||||||| |||| | | |||||     
T  34819094 gtagaagatgaagaaaagaaaaaaaaaattaggtgttggtggtacaccataagataaaatagacttgcctaatccaatggttctttttttataaaaaaaa 34819193  T
Q  250 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||| ||| |||||||||||| ||||||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||||||||||||    
T  34819194 caaacagtttaaattaaaataagtaataggatctatggtggaccactcttaaggttgatccactatagacatcatttggggttaaacttaac 34819285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 198 - 420
Target Start/End: Complemental strand, 53622910 - 53622700
Alignment:
Q  198 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactc 297  Q
    |||||||||||||||| || |||||||||| || ||| ||||||| || |||||||||||| ||||||||| |||||||||            |||||||    
T  53622910 gtaagataaaatagacatgcgtaatccaatcgtactcctttaaaataagaatcaaacggtttaaattaaaacaattaatag------------accactc 53622823  T
Q  298 ttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccattttt 397  Q
    |||| |||||||||||||| ||||||||||||||||||||||||| |||| ||||| |||| ||||||| |||||| |||||||  ||||     |||||    
T  53622822 ttaaggttggtccaccatagacatcatttggggttaaacttaaccgttgggatttagttggcaaacggaggaaaatctaagggatcaaaatatatttttt 53622723  T
Q  398 attaattgtgggaccaaaatgaa 420  Q
    |||||||||| ||||||||||||    
T  53622722 attaattgtgcgaccaaaatgaa 53622700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 244 - 422
Target Start/End: Original strand, 38242419 - 38242596
Alignment:
Q  244 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaacca 343  Q
    ||||||||||||||| ||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| ||||||||| | ||||||||||||      
T  38242419 aaaaatcaaacggtttaaattaaaataattaatagaatttatggtggaccactcttaaggttggtccaccatagacatcattt-gagttaaacttaactg 38242517  T
Q  344 ttggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |  | |||||||||| |||| ||  |||| || |||||| |||| |    ||||||||||||||||| |||||||||||    
T  38242518 tgaggatttatttggcaaacagataaaaaagtgagggaccaaaaggtacgttttattaattgtgggatcaaaatgaaaa 38242596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 121 - 432
Target Start/End: Complemental strand, 53420655 - 53420342
Alignment:
Q  121 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaagga-aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 219  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||   | |||| | |||| ||||| |||||||||||||| || |||||||  || |    
T  53420655 tgtgagttgaagatgatgaagattattaaggtagaagatgaagaaagaaataaaagaattagttgttgttggtacatcgtaagttacaatagacacgtat 53420556  T
Q  220 aatccaatggt--tctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatat 317  Q
    |||  ||||||  | | |||||| | | | ||||||| ||| |||||||||   |||||| | ||||||||||| |||| |||||||||||||||||||     
T  53420555 aatttaatggtcattttttttaagaaacagatcaaacagtttaaattaaaaagtttaataaggtctatggtggatcacttttaaagttggtccaccatag 53420456  T
Q  318 acatcatttggggttaaactta--accattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaa 415  Q
    |   |||||| |||||||||||  |   | || ||||||||| ||||||||  |||| || |||||| ||||||    ||||||||||||| ||||||||    
T  53420455 a---catttgtggttaaacttaatagactagggatttatttgataaacggagaaaaaagtgagggaccaaaacgtacgttttattaattgtaggaccaaa 53420359  T
Q  416 atgaaaataagaaatta 432  Q
    ||||||||| |||||||    
T  53420358 atgaaaatatgaaatta 53420342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 153 - 311
Target Start/End: Complemental strand, 46369110 - 46368953
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 252  Q
    ||||||||| |||||| ||||| | ||| |||||||||||||||||||||||||||||||  | ||||||| ||||||||||| |||||| || ||| ||    
T  46369110 agaagatgatgaaaagaaaaaaaagttacgtgttggtggtacatcgtaagataaaatagatatttgtaatctaatggttctctcttaaaa-aataataaa 46369012  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtcca 311  Q
    | | || |||||||||||||||||| ||| ||||||||| ||||||| |||||| ||||    
T  46369011 atgatttaaattaaaataattaatatgatatatggtggaacactctttaagttgatcca 46368953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 27838029 - 27837943
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| ||||||| ||||| || ||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||    
T  27838029 atttatttggcaaacggaggaaaaggtgagggactaaaacgccatatttattaattgtgggaccaaaatgaaaacatgaaattaaat 27837943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 53612980 - 53612894
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| |||| || |||||||| ||||| |||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  53612980 atttatttggcaaacagaggaaaatgtgagggaataaaacgccatttttattaattatgggaccaaaatgaaaacaagaaattaaat 53612894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 188 - 422
Target Start/End: Original strand, 53624210 - 53624441
Alignment:
Q  188 gtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttt-taaaagaaaaatcaaacggttgaaattaaaataattaataggatctatg 286  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||||| | ||| ||| |||||| |||| ||||| ||| |||||||| | ||||||    
T  53624210 gtggtacatcgtaagataaaatagacacgtgtaatccaacggttctctttcttaaaaaaagatcaaaaggttaaaattgaaa-aattaataaggtctatg 53624308  T
Q  287 gtggaccactct-taaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaa 385  Q
    |||||| | ||| ||| ||||||||||||||||   ||||||||||||||| ||||| |  | |||||||||| |||| ||  |||| || || ||| ||    
T  53624309 gtggacta-tctataatgttggtccaccatata---catttggggttaaacctaaccgtctggatttatttggcaaaccgagaaaaaagtgagtgaccaa 53624404  T
Q  386 aacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    || |    |||||||||||||| || |||||||||||    
T  53624405 aatgtacgttttattaattgtgagatcaaaatgaaaa 53624441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 153 - 341
Target Start/End: Complemental strand, 49380005 - 49379819
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 252  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| |  || |||||||||||   ||| ||| ||| ||| |||||    
T  49380005 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacatctgcgtaatccaatgaccctccttttaaaaaaatatcaa 49379906  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    || ||| |||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||  || ||||||||| |||||    
T  49379905 acagtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat--ttgggggttaaagttaac 49379819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 153 - 321
Target Start/End: Complemental strand, 13621223 - 13621055
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 252  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| |  || |||||||||||   ||| ||| ||| |||||| ||    
T  13621223 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacatctgcgtaatccaatgaccctccttttaaaaaaaaattaa 13621124  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||||| |||||| |||||||||||||||||||||||||||| | || |||| ||||||||||| ||||    
T  13621123 acggtttaaattagaataattaataggatctatggtggaccattttttaagtcggtccaccatagacat 13621055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 239 - 316
Target Start/End: Complemental strand, 10301151 - 10301074
Alignment:
Q  239 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 316  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||| |||||| |||||||    
T  10301151 aaaaaaaaaatcaaacagtttaaattaaaataattaataggatctatggtggatcactcttaaggttggttcaccata 10301074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 10338955 - 10338886
Alignment:
Q  239 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggt 308  Q
    |||| ||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||| ||||||    
T  10338955 aaaaaaaaaatcaaacagttaaaattaaaataattaataggatctatggtggaccactcttaaggttggt 10338886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 349 - 434
Target Start/End: Original strand, 35372165 - 35372250
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaa 434  Q
    |||||||||| |||| || ||||| || ||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||    
T  35372165 atttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaattaaa 35372250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 235 - 314
Target Start/End: Original strand, 14745095 - 14745174
Alignment:
Q  235 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacca 314  Q
    |||||||| | | ||||||| ||| |||||||||||||||||||||||||||||| ||||||||||| ||||||||||||    
T  14745095 ttttaaaatatagatcaaacagtttaaattaaaataattaataggatctatggtgaaccactcttaaggttggtccacca 14745174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 316
Target Start/End: Original strand, 3455526 - 3455600
Alignment:
Q  241 aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 316  Q
    |||||| |||||| |||||| |||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||    
T  3455526 aagaaagatcaaagggttgagattaaa-taattaatatgatctatggtggaccactcttaaggttggtccaccata 3455600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 422
Target Start/End: Complemental strand, 42685097 - 42684912
Alignment:
Q  235 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaa 334  Q
    |||||||| | | ||||||||||| ||||||||| | |||||| | | |||||||||||||||||||  ||||| ||||||| |   |||||||||||||    
T  42685097 ttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtttatggtggaccactcttaagcttggttcaccataga---catttggggttaa 42685001  T
Q  335 acttaaccat-tggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||  |   | |||||||||||||||  |  ||||  | ||||||||||||| || ||||||| ||| ||| |||||||||||||    
T  42685000 acttaacagtcaaggatttatttggtaaacatagaaaaaaatgagggactaaaacgtcagttttattcattatggaaccaaaatgaaaa 42684912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 260 - 431
Target Start/End: Complemental strand, 10731080 - 10730912
Alignment:
Q  260 aaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggt 359  Q
    ||||||| | |||||||| | | |||| | ||||||| |||| |||||| ||||||| ||||   |||  |||||| |||||  | || ||||||||||     
T  10731080 aaattaacaaaattaataaggtatatgatagaccacttttaaggttggttcaccatagacat---ttgaagttaaagttaacagtcgggatttatttggc 10730984  T
Q  360 aaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatt 431  Q
    |||||||  |||| || | |||| |||| |||||||||||||||| ||||||||||||||||| ||||||||    
T  10730983 aaacggagaaaaaagtgaaggaccaaaatgccatttttattaattatgggaccaaaatgaaaacaagaaatt 10730912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 248 - 341
Target Start/End: Original strand, 12107887 - 12107979
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||||||| | ||||||| ||  |||||| |||||||||||||||| |||| |||||||||||||| | |||||||||||||||| |||||    
T  12107887 atcaaacggtttatattaaaaaaaa-aatagggtctatggtggaccacttttaaggttggtccaccataaatatcatttggggttaaatttaac 12107979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 18458664 - 18458737
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| ||||| || |||||||||||||| | |||||||||||||||||||||||| ||||    
T  18458664 atttatttggcaaacggaggaaaaagtgagggactaaaacgcaagttttattaattgtgggaccaaaataaaaa 18458737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 330 - 435
Target Start/End: Original strand, 26887543 - 26887648
Alignment:
Q  330 gttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaa 429  Q
    |||||| |||||| |  |||||||||||| |||| || |||||  | ||||||||||  ||||||||||||||||||||||| |||||||||| | ||||    
T  26887543 gttaaagttaaccgtcagaatttatttgggaaacagaggaaaagatgagggactaaattgccatttttattaattgtgggacaaaaatgaaaacatgaaa 26887642  T
Q  430 ttaaat 435  Q
    ||||||    
T  26887643 ttaaat 26887648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 201 - 294
Target Start/End: Complemental strand, 37415252 - 37415157
Alignment:
Q  201 agataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa--atcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    |||||||||| || |||||||| ||||||| ||||||||||| ||||  ||  ||||||| ||||||||| |||||||| ||||||||||||||||    
T  37415252 agataaaataaacatgtgtaattcaatggtcctcttttaaaaaaaaacaatttaacggttaaaattaaaagaattaataagatctatggtggacca 37415157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 48083428 - 48083362
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||| ||||||||||||||||||||||||||||| |||||||||||| ||| || ||||||| ||||    
T  48083428 ggtttaaattaaaataattaataggatctatggtagaccactcttaaggttagtgcaccatagacat 48083362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 44602901 - 44602997
Alignment:
Q  198 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||||||||||  | |||||||||| ||| || ||| ||| |||| ||||||||||| ||||||||| ||||||||||||||||||| |||||    
T  44602901 gtaagataaaatagacacgcgtaatccaatagttatccttttaaataaaagatcaaacggtttaaattaaaa-aattaataggatctatggtagacca 44602997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 50809652 - 50809563
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 242  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || |||||||||||||||||||||||||    
T  50809652 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggttctcttttaaaa 50809563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 50866210 - 50866299
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 242  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || |||||||||||||||||||||||||    
T  50866210 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggttctcttttaaaa 50866299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 153 - 301
Target Start/End: Original strand, 53194425 - 53194573
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 252  Q
    |||||||||||||| ||||||  | ||| |||||  |||| |||||||||||| |||| || || || ||| || | |  || ||| ||| ||| |||||    
T  53194425 agaagatgaagaaagggaaaaggaattaagtgttcatggttcatcgtaagatagaatacacatgcgtgatctaacgatcttcattttaaaaaaagatcaa 53194524  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccactcttaa 301  Q
    |||||| ||| ||||||||||||||| |||||||||||| |||| ||||    
T  53194525 acggtttaaaataaaataattaatagaatctatggtggatcacttttaa 53194573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 198 - 342
Target Start/End: Original strand, 21074137 - 21074280
Alignment:
Q  198 gtaagataaaatagacttgtgtaatccaatggttctcttt-taaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||||| || || || |||||||  ||||| | ||| ||| |||||| |||| ||||| ||| |||||||| | |||||||||||| | |    
T  21074137 gtaagataaaatagacatgcgtgattcaatggtcatctttcttaaaaaaatatcaaagggttaaaattgaaaaaattaataaggtctatggtggacta-t 21074235  T
Q  297 ct-taaagttggtccaccatatacatcatttggggttaaacttaacc 342  Q
    || ||| |||||||||||||||||||  || ||||||||||||||||    
T  21074236 ctataatgttggtccaccatatacat--ttgggggttaaacttaacc 21074280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 197 - 302
Target Start/End: Original strand, 24487176 - 24487280
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    ||||||||||||||||  ||  ||||| |||||| ||| ||||||| ||| |||| ||  || ||||||||| ||||||||||||||||||| ||||| |    
T  24487176 cgtaagataaaatagatctgcttaatcaaatggtcctcctttaaaaaaaagatcatacaatttaaattaaaa-aattaataggatctatggttgaccaat 24487274  T
Q  297 cttaaa 302  Q
    ||||||    
T  24487275 cttaaa 24487280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 50809530 - 50809457
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| |||||||||||||||||    
T  50809530 atttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50809457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 50866332 - 50866405
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| |||||||||||||||||    
T  50866332 atttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50866405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 379 - 435
Target Start/End: Complemental strand, 41263717 - 41263661
Alignment:
Q  379 ggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||| |||| |||||||||| ||| ||||||||||||||||||||| ||||||||||    
T  41263717 ggaccaaaatgccatttttaataaatgtgggaccaaaatgaaaatatgaaattaaat 41263661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 255 - 432
Target Start/End: Complemental strand, 38241105 - 38240932
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 354  Q
    |||| ||||||| | |||||||| | |||| | ||||||| | |||| |||||| ||||||| ||||   |||| ||||||||||||    || ||||||    
T  38241105 ggttaaaattaacaaaattaataagctctacgatggaccatttttaa-gttggttcaccatagacat---ttggagttaaacttaacagccgggatttat 38241010  T
Q  355 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||| ||||||| |||||| | | ||||| |||||    |||||||||||||||||||||||| |||||  |||||||    
T  38241009 ttggcaaacggaggaaaatctgaaggacttaaacgtacgttttattaattgtgggaccaaaataaaaatttgaaatta 38240932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 199 - 290
Target Start/End: Original strand, 54110143 - 54110233
Alignment:
Q  199 taagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtgg 290  Q
    ||||||||||||||| |    |||||||||||  || ||| ||| |||||||||||| || ||||||||| |||||||||||||||||||||    
T  54110143 taagataaaatagacctacaaaatccaatggtcatcgttttaaaaaaaaatcaaacgatttaaattaaaa-aattaataggatctatggtgg 54110233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 422
Target Start/End: Complemental strand, 18442401 - 18442288
Alignment:
Q  303 gttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaa 402  Q
    |||||||||||||| ||||   ||||||||||||||||| |   |||||||||||| ||  |||| ||||||  | |||||||||||    |||||||||    
T  18442401 gttggtccaccatagacat---ttggggttaaacttaacaacatgaatttatttggcaagaggaa-aaaatg--atggactaaaacgtgggttttattaa 18442308  T
Q  403 ttgtgggaccaaaatgaaaa 422  Q
    ||||||||||||||||||||    
T  18442307 ttgtgggaccaaaatgaaaa 18442288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 422
Target Start/End: Complemental strand, 19487475 - 19487362
Alignment:
Q  303 gttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaa 402  Q
    |||||||||||||| ||||   ||||||||||||||||| |   |||||||||||| ||  |||| ||||||  | |||||||||||    |||||||||    
T  19487475 gttggtccaccatagacat---ttggggttaaacttaacaacatgaatttatttggcaagaggaa-aaaatg--atggactaaaacgtgggttttattaa 19487382  T
Q  403 ttgtgggaccaaaatgaaaa 422  Q
    ||||||||||||||||||||    
T  19487381 ttgtgggaccaaaatgaaaa 19487362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 350 - 432
Target Start/End: Original strand, 37736089 - 37736171
Alignment:
Q  350 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||||| |||||||  |||| || |||||||||||||    |||||||||||||| |||||||||||||| | |||||||    
T  37736089 tttatttggcaaacggagaaaaaagtgagggactaaaacgtacgttttattaattgtgagaccaaaatgaaaacatgaaatta 37736171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 274 - 315
Target Start/End: Original strand, 11224776 - 11224817
Alignment:
Q  274 aataggatctatggtggaccactcttaaagttggtccaccat 315  Q
    |||| ||||||||||||||||||||||| |||||||||||||    
T  11224776 aatatgatctatggtggaccactcttaaggttggtccaccat 11224817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 50810719 - 50810808
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 242  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || ||||||||||||| ||| |||||||    
T  50810719 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggtcctcctttaaaa 50810808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 50810841 - 50810914
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| |||||  | |||||||||||||    ||||||||||| |||||||||||||||||    
T  50810841 atttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50810914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 50865023 - 50864950
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| |||||  | |||||||||||||    ||||||||||| |||||||||||||||||    
T  50865023 atttatttggcaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 50864950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 50865145 - 50865056
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 242  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || ||||||||||||| ||| |||||||    
T  50865145 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggtcctcctttaaaa 50865056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 219 - 295
Target Start/End: Complemental strand, 11219664 - 11219588
Alignment:
Q  219 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    |||| ||| ||| ||||||||||  |||||||||| |||| ||||||||| | |||||| ||||||||||| |||||    
T  11219664 taattcaacggtcctcttttaaagaaaaaatcaaatggttaaaattaaaaaatttaatacgatctatggtgaaccac 11219588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 330 - 422
Target Start/End: Complemental strand, 34818214 - 34818122
Alignment:
Q  330 gttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||| ||||| ||||| |||||||||| ||| ||| |||||| | |||||| ||| |     |||||||||||||||||||||||||||||    
T  34818214 gttaaagttaactattgggatttatttggcaaatggaggaaaatctgagggaccaaatcatacgttttattaattgtgggaccaaaatgaaaa 34818122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 155 - 242
Target Start/End: Original strand, 43174593 - 43174679
Alignment:
Q  155 aagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 242  Q
    ||||||||||| |||||||| |  |||||||||||| |||||| || ||||||||||||| || | ||||||||||| |||||||||||    
T  43174593 aagatgaagaagaggaaaaaaaagttaggtgttggtagtacat-gttagataaaatagacatgag-aatccaatggtcctcttttaaaa 43174679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 312
Target Start/End: Complemental strand, 7270546 - 7270467
Alignment:
Q  234 cttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 312  Q
    ||||||||| |||| ||||||| ||| || | |||| | |||||| |||||||||| |||||||||||| ||||||||||    
T  7270546 cttttaaaacaaaagatcaaacagttaaagtcaaaaaagttaataagatctatggtagaccactcttaaggttggtccac 7270467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 18197256 - 18197173
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||| ||||||| |||||  | |||||| |||| |    ||||||||||||||||||||||||||||||  |||||||    
T  18197256 atttatttggcaaacggaggaaaaaatgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaatta 18197173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 294
Target Start/End: Original strand, 28909498 - 28909561
Alignment:
Q  232 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||| | |||| ||||| | ||| ||||||||| |||||||||||||||||||||||||    
T  28909498 ctcttttaataaaaaagatcaaccagtttaaattaaaaaaattaataggatctatggtggacca 28909561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Original strand, 36176559 - 36176598
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaataagaaattaa 433  Q
    ||||||||||||||||||||||||||||| | ||||||||    
T  36176559 ttttattaattgtgggaccaaaatgaaaacatgaaattaa 36176598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 323 - 382
Target Start/End: Complemental strand, 53187693 - 53187634
Alignment:
Q  323 atttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggac 382  Q
    |||||||||||||||||||  | || |||||||||| ||||||||||||| || ||||||    
T  53187693 atttggggttaaacttaacggtagggatttatttggcaaacggaagaaaaagtgagggac 53187634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 394 - 423
Target Start/End: Original strand, 3209983 - 3210012
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaat 423  Q
    ||||||||||||||||||||||||||||||    
T  3209983 ttttattaattgtgggaccaaaatgaaaat 3210012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 165 - 270
Target Start/End: Original strand, 40245745 - 40245852
Alignment:
Q  165 aaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa--aagaaaaatcaaacggttgaaa 262  Q
    ||||| |||| | |||||||||| | ||| || |||||||||||||||| ||| ||||| |||  |||||||||    || ||||||||||||||| |||    
T  40245745 aaaggtaaaataattaggtgttgatagtatatagtaagataaaatagacctgtctaatcgaatcattctcttttttttaaaaaaaatcaaacggtttaaa 40245844  T
Q  263 ttaaaata 270  Q
    ||| ||||    
T  40245845 ttataata 40245852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 188; Significance: 1e-101; HSPs: 45)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 188; E-Value: 1e-101
Query Start/End: Original strand, 152 - 435
Target Start/End: Original strand, 18616817 - 18617099
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||  || ||||||||    
T  18616817 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctcttttttaaaaaaaatca 18616915  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||   |||||||||||| |||||||||||||||||||||||   |||| |||    
T  18616916 aacggttgaaattaaaataattaataggatctatggtggaccacttttaagactggtccaccatagacatcatttggggttaaacttaatagttgggatt 18617015  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  18617016 tatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 18617099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 152 - 435
Target Start/End: Complemental strand, 29219689 - 29219408
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||     |||| |||    
T  29219689 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctctttttttttaaaa-tca 29219592  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||  |||| |||    
T  29219591 aacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatt 29219492  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  29219491 tatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 29219408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 180; E-Value: 6e-97
Query Start/End: Original strand, 152 - 435
Target Start/End: Complemental strand, 29332988 - 29332707
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||||||||     |||| |||    
T  29332988 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtacatcgtaagataaaatagacctatctaatccaatggttctctttttttttaaaa-tca 29332891  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||  |||| |||    
T  29332890 aacggttgaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacagttgggatt 29332791  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  29332790 tatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 29332707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 152 - 435
Target Start/End: Original strand, 1085198 - 1085479
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaag--aaaaat 249  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| || ||  ||||||||| ||||||||||       ||||||    
T  1085198 tagaagatgaagaaaagaaaaaaaatt-aggtgttggtggtacatcgtaagataaaataaacctgcttaatccaattgttctcttttttttttaaaaaat 1085296  T
Q  250 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaa 349  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| || ||||||||| |||||||||    |||||||||||  |||  |    
T  1085297 caaacggtcgaaattaaaataattaataggatctatggtgtaccactcttaaagatgatccaccataaacatcattt-ttattaaacttaacggttgtga 1085395  T
Q  350 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||||| ||||||| |||||||  |||||| ||||||||| ||||||||| ||||| ||||||||||||| | ||||||||||    
T  1085396 tttatttggcaaacggaggaaaatg--agggaccaaaacgccaattttattaaatgtggtaccaaaatgaaaacatgaaattaaat 1085479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 151 - 422
Target Start/End: Complemental strand, 17459565 - 17459289
Alignment:
Q  151 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt---------aaa 241  Q
    |||||||||||||||| | |||||   |||||||||||||||| ||| || ||||||||||    || ||||||||||||||||||||         |||    
T  17459565 gtagaagatgaagaaaggaaaaaa---ttaggtgttggtggtatatcata-gataaaataggtcagtctaatccaatggttctctttttttaaaaaaaaa 17459470  T
Q  242 agaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
      ||||||||||||||| |||||| |||||||||||||||||||| | || |||| ||||  || |||||||||| |||||||||||||||||||||||     
T  17459469 taaaaaatcaaacggtttaaattataataattaataggatctatgttagatcacttttaagattcgtccaccatagacatcatttggggttaaacttaaa 17459370  T
Q  342 cattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
      |  |||||||||||| ||||||| ||||| || ||||||| |||||    |||||||||||||| ||||||||||||||    
T  17459369 agtcagaatttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgtgaccaaaatgaaaa 17459289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 154 - 432
Target Start/End: Original strand, 42641672 - 42641950
Alignment:
Q  154 gaagatgaagaaaaggaaaaacat-ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atca 251  Q
    |||||||||||||| |||||| |  ||| ||||||  ||| || |||||||||||||| || |  || |||||| | ||||||||||||| |||| ||||    
T  42641672 gaagatgaagaaaaagaaaaaaaagttaagtgttgaaggttcaacgtaagataaaatacacctacgtgatccaacgattctcttttaaaaaaaaagatca 42641771  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||||| |||||||| ||||||||| ||||| |||||||   |  | |||    
T  42641772 aacagtttaaattaaaataattaataggatctatggtagaccactcttaaggttggcccaccatagacatcattt-gggttgaacttaattgtgaggatt 42641870  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||| |||||||| |||| ||  ||||| |||| |    ||||||||||| |||||||||||| |||||  |||||||    
T  42641871 tatttggcaaacggaa-aaaaagtgggggaccaaaaggtgcgttttattaattatgggaccaaaataaaaatttgaaatta 42641950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 154 - 422
Target Start/End: Complemental strand, 32469452 - 32469184
Alignment:
Q  154 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 253  Q
    |||||||||||||| |||||| | ||| |||||| |||| ||  |||||||| |||| || | ||| ||| || ||| |||  || ||  ||| ||||||    
T  32469452 gaagatgaagaaaaagaaaaaaagttaagtgttgatggttcaatgtaagatacaatacacctatgtgatctaacggtcctccatttaataaaatatcaaa 32469353  T
Q  254 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattta 353  Q
     |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| | |||||||||||| ||  | |||||    
T  32469352 gggtttaaattaaaataattaataggatctatagtggaccactcttaaagttggtccaccatatacataattt-gagttaaacttaactataaggattta 32469254  T
Q  354 tttggtaaacggaagaaaatgtaagggactaaaacg--ccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||  |||||| ||||| || | |||| |||| |  |   ||||||||||||||||| |||||||||||    
T  32469253 tttgg-caacggaggaaaaagtgaaggaccaaaaggtacacgttttattaattgtgggatcaaaatgaaaa 32469184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 219 - 422
Target Start/End: Complemental strand, 43033319 - 43033118
Alignment:
Q  219 taatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatat 317  Q
    |||||||||||| |||||||| ||||||  |||| | |||| |||||||||||||||||||| | ||||||||||||||||||| ||||||| ||||||     
T  43033319 taatccaatggtcctcttttagaagaaatgatcacaaggtttaaattaaaataattaatagggtttatggtggaccactcttaaggttggtctaccatag 43033220  T
Q  318 acatcatttggggttaaacttaaccattg-gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaa 416  Q
    ||||   ||| ||||||||||||| || | | |||||||||| ||||||| ||||| || |||||| |||| |    |||||||||||||||||||||||    
T  43033219 acat---ttgaggttaaacttaac-atcgaggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaa 43033124  T
Q  417 tgaaaa 422  Q
    ||||||    
T  43033123 tgaaaa 43033118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 125 - 341
Target Start/End: Original strand, 34513336 - 34513551
Alignment:
Q  125 agttgaagatgatgaagatttataaggtagaagatgaagaaa--aggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaat 222  Q
    ||||||||||||||||||||  ||||||||||||||||||||  | |||||| ||| || ||||| ||||||| |||||| || |||||||  |  ||||    
T  34513336 agttgaagatgatgaagattagtaaggtagaagatgaagaaagaaagaaaaaaatt-agttgttgttggtacaccgtaagttacaatagacacgcataat 34513434  T
Q  223 ccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||||| |  |||||| ||| || | ||||||||||| ||||||||| |||||||| | ||||||||||| ||||||||| ||||||| ||||||||       
T  34513435 ccaatgatcatctttttaaaaaacagatcaaacggtttaaattaaaaaaattaataaggtctatggtggatcactcttaaggttggtcaaccatata--- 34513531  T
Q  322 catttggggttaaacttaac 341  Q
    ||||||||||||| ||||||    
T  34513532 catttggggttaagcttaac 34513551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 153 - 341
Target Start/End: Complemental strand, 8321064 - 8320871
Alignment:
Q  153 agaagatgaagaaaagga---aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aa 248  Q
    ||||||||||||||| ||   |||| | |||||||||| |||| || | | |||||||||||||||| || ||| |||| | ||||||||||| ||| ||    
T  8321064 agaagatgaagaaaaagataaaaaaaaattaggtgttgatggtgcaccattagataaaatagacttgcgtgatcaaatgttcctcttttaaaaaaaacaa 8320965  T
Q  249 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatataca-tcatttggggttaaacttaac 341  Q
    |||||||||| ||||||||||||||||||  |||||||||||||| ||||||| | |||||||||||| | |  |||||||||||||| |||||    
T  8320964 tcaaacggtttaaattaaaataattaatataatctatggtggaccgctcttaaggatggtccaccatagatagacatttggggttaaaattaac 8320871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 250 - 432
Target Start/End: Original strand, 11317277 - 11317458
Alignment:
Q  250 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaa 349  Q
    |||||| || ||||||||||||||||||||||||||||| |||||||||||| ||||||| |||||| ||||||||| | ||||||||||||  |  | |    
T  11317277 caaacgatttaaattaaaataattaataggatctatggtagaccactcttaaggttggtctaccatagacatcattt-gagttaaacttaactgtgagga 11317375  T
Q  350 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||||  ||||||| |||||  | |||||| ||||      ||||||||||||||||||||||||||||||  |||||||    
T  11317376 tttatttgccaaacggaggaaaaattgagggaccaaaatatatgttttattaattgtgggaccaaaatgaaaatttgaaatta 11317458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 18615625 - 18615539
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| ||||||| ||||||||| |||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||    
T  18615625 atttatttggcaaacggaggaaaatgtaggggactaaaaagccatttttattaattgtgagaccaaaatgaaaatatgaaattaaat 18615539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 353 - 435
Target Start/End: Original strand, 29220887 - 29220969
Alignment:
Q  353 atttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  29220887 atttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaatatgaaattaaat 29220969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 353 - 435
Target Start/End: Original strand, 29334186 - 29334268
Alignment:
Q  353 atttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||| |||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  29334186 atttggcaaacagaggaaaatgtaagggactaaaaagccatttttattaattgtgggaccaaaatgaaaatatgaaattaaat 29334268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 4920916 - 4921057
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||| || || ||||||||||| | ||| ||| ||| ||||||||||||||| |||||| ||||||||||||||| |||||||||||| |    
T  4920916 cgtaagataaaatacacctgcgtaatccaatgatcctccttttaaa-aaaaatcaaacggtttaaattagaataattaataggatttatggtggaccatt 4921014  T
Q  297 cttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
     |||||||||||| |||||| ||||  || ||||||||| |||||    
T  4921015 tttaaagttggtctaccatagacat--ttgggggttaaagttaac 4921057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 248 - 422
Target Start/End: Original strand, 6030377 - 6030550
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    ||||||||||| |||||||||  |||||||||||||||||| || ||||||||| ||||||||||| || ||||||||| |||||||| |||||  |||     
T  6030377 atcaaacggtttaaattaaaaatattaataggatctatggtagatcactcttaaggttggtccaccgtagacatcattt-gggttaaagttaactgttga 6030475  T
Q  348 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     |||||||||| |||  || |||||| | | |||  ||||||   |||| ||||||||||||| |||||||||||    
T  6030476 gatttatttggcaaatagaggaaaatatgaaggatcaaaacgtacttttaattaattgtgggatcaaaatgaaaa 6030550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 34469067 - 34468981
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| |||| ||||||||||| ||||||||||||| ||||||||||||||||| |||||||||||||| | ||||||||||    
T  34469067 atttatttggcaaacagaagaaaatgtgagggactaaaacgtcatttttattaattgtgcgaccaaaatgaaaacatgaaattaaat 34468981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 153 - 275
Target Start/End: Complemental strand, 35903844 - 35903719
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctt---ttaaaagaaaaat 249  Q
    |||||||||||||||||||||| | |||||| ||| ||||||||| ||||||||||||||| ||| ||||| ||||||||| ||     |||| ||||||    
T  35903844 agaagatgaagaaaaggaaaaaaagttaggtattgctggtacatcataagataaaatagacatgtataatctaatggttcttttaaaaaaaaaaaaaaat 35903745  T
Q  250 caaacggttgaaattaaaataattaa 275  Q
    ||||||||| ||||||||||| ||||    
T  35903744 caaacggtttaaattaaaatatttaa 35903719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 153 - 321
Target Start/End: Original strand, 28611066 - 28611233
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 252  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || | |||||||||||| || || ||||| |||||   ||| ||| ||| |||||||||    
T  28611066 agaagatgaagaaagggagaaataattaagtgttgttgactcaccataagataaaatacacctgcgtaattcaatgaccctccttttaaaaaaaaatcaa 28611165  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||||| |||||||| ||||||||||||||||| |||||||| | ||||||| ||||||||||| ||||    
T  28611166 acggtttaaattaaa-taattaataggatctatagtggaccatttttaaagtcggtccaccatagacat 28611233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 347 - 435
Target Start/End: Original strand, 44192451 - 44192539
Alignment:
Q  347 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||||  ||||||| |||||||| ||||||||||| |||||||||||||||| ||||| ||||||||||| | ||||||||||    
T  44192451 gaatttatttgacaaacggaggaaaatgtgagggactaaaatgccatttttattaattttgggatcaaaatgaaaacatgaaattaaat 44192539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 6030714 - 6030628
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| ||||||| |||||  ||||| |||||||||||| |||||||||||||||||| |||||||||| | ||||||||||    
T  6030714 atttatttggcaaacggaggaaaaaataaggaactaaaacgccaattttattaattgtgggactaaaatgaaaacatgaaattaaat 6030628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 341
Target Start/End: Complemental strand, 11547868 - 11547776
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||||||| |||||| || | |||||| ||||||||||||||||||| ||| |||||||||  ||| ||||||||||||||||||||||||    
T  11547868 atcaaacggtttaaattataa-atttaatacgatctatggtggaccactcctaaggttggtccatgatagacatcatttggggttaaacttaac 11547776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 197 - 321
Target Start/End: Original strand, 43034336 - 43034451
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    ||||||||||||||||| ||  ||||||||||||  |||||||||| |  |||||||||||| |||||         |||||||||||||||||||||||    
T  43034336 cgtaagataaaatagacatgcataatccaatggtcatcttttaaaaaattaatcaaacggtttaaatt---------aataggatctatggtggaccact 43034426  T
Q  297 cttaaagttggtccaccatatacat 321  Q
    |||||||||| ||||||||| ||||    
T  43034427 cttaaagttgatccaccatagacat 43034451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 304
Target Start/End: Complemental strand, 35903715 - 35903659
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagt 304  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||    
T  35903715 atcaaacggtttaaattaaaatatttaataggatctatggtggaccactctaaaagt 35903659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 330 - 435
Target Start/End: Complemental strand, 1083116 - 1083011
Alignment:
Q  330 gttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaa 429  Q
    |||||| |||||  |||| ||||| |||| |||||||  ||||  | | |||| ||||| ||||||||||||| ||||||||||||||||||||| ||||    
T  1083116 gttaaagttaacacttgggatttaattggcaaacggagaaaaagatgacggaccaaaacaccatttttattaaatgtgggaccaaaatgaaaatatgaaa 1083017  T
Q  430 ttaaat 435  Q
    ||||||    
T  1083016 ttaaat 1083011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 123 - 321
Target Start/End: Complemental strand, 34467848 - 34467641
Alignment:
Q  123 tgagttgaagatgatgaagatttataaggtagaagatgaagaaa------aggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttg 216  Q
    |||||| |||||||||||||||  |||||||||| |  ||||||      | |||||| |||||| ||||| |||||||||||||| || |||||||       
T  34467848 tgagttaaagatgatgaagattagtaaggtagaatactaagaaagaaagaaagaaaaaaatttagttgttgttggtacatcgtaagttacaatagacaca 34467749  T
Q  217 tgtaatccaatggttctc-ttttaaaagaaaaat--caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 313  Q
    | ||||||| ||||  || |||||||| ||||||  ||||| ||| ||||||||| | |||||| | | ||||||||||||||||||| ||| ||||| |    
T  34467748 tataatccagtggtcatcattttaaaaaaaaaatatcaaacagtttaaattaaaaaacttaataaggtttatggtggaccactcttaaggtttgtccatc 34467649  T
Q  314 atatacat 321  Q
    ||| ||||    
T  34467648 atagacat 34467641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 154 - 432
Target Start/End: Original strand, 28562620 - 28562899
Alignment:
Q  154 gaagatgaagaaaaggaaaaacat---ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttt-taaaagaaaaat 249  Q
    ||||| ||||||||||||||| |    ||||||| | |||||| || ||||||||||||| || | || |||||||  || |||||| | ||| ||| ||    
T  28562620 gaagaggaagaaaaggaaaaaaaaaaattaggtgctagtggtatatggtaagataaaataaacatatgcaatccaaccgtcctctttcttaaaaaaagat 28562719  T
Q  250 caaacggttgaaattaaaataattaataggatctatggtggaccactct-taaagttggtccaccatatacatcatttggggttaaacttaaccattgga 348  Q
    |||| |||| |||||  || | |||||| | |||||||||||| | ||| ||| |||||||||||||||| ||   ||||| |||||||||||  |  |     
T  28562720 caaagggttaaaattggaaaatttaataaggtctatggtggacta-tctataatgttggtccaccatatatat---ttgggattaaacttaacagtctgg 28562815  T
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||  ||||||| ||||| || |||||| |||| |    ||||||||||| ||||||||||||||||||  |||||||    
T  28562816 atttatttgacaaacggaggaaaaagtgagggaccaaaaggtatgttttattaattatgggaccaaaatgaaaatttgaaatta 28562899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 349 - 431
Target Start/End: Original strand, 6032321 - 6032403
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatt 431  Q
    |||||||||| |||| || |||||  || ||||||||||| ||||||||||||||||||| |||||||| |||| | ||||||    
T  6032321 atttatttggcaaacagaggaaaaaatacgggactaaaacaccatttttattaattgtggaaccaaaataaaaacatgaaatt 6032403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 270 - 422
Target Start/End: Complemental strand, 11316118 - 11315969
Alignment:
Q  270 aattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaaga 369  Q
    |||||||| | |||| ||||||||| | |||| |||| ||||||||| ||||   ||||  |||||||||||    || |||||||||| ||||||| ||    
T  11316118 aattaataaggtctacggtggaccatttttaaggttgatccaccatagacat---ttggaattaaacttaacagccgggatttatttggcaaacggagga 11316022  T
Q  370 aaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||  | ||||||| |||||    |||||||||||||||||||||||||||||    
T  11316021 aaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 11315969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 377 - 435
Target Start/End: Complemental strand, 44191217 - 44191159
Alignment:
Q  377 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||||||| || |||||||||||||||||||| |||||||||| | ||||||||||    
T  44191217 agggactaaaatgcaatttttattaattgtgggactaaaatgaaaacatgaaattaaat 44191159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 341
Target Start/End: Complemental strand, 34464176 - 34464086
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||| ||| ||||||||| |  ||||| | ||||||||||||||||||||| ||||||| || ||| |   ||||||||||||||||||||    
T  34464176 atcaaacagtttaaattaaaaaatctaataaggtctatggtggaccactcttaaggttggtcaacgataga---catttggggttaaacttaac 34464086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 157 - 238
Target Start/End: Complemental strand, 7436766 - 7436685
Alignment:
Q  157 gatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt 238  Q
    ||||| ||||| ||| || | ||||||| | |||||||||| ||||||||||||||  |||||||||||| ||| |||||||    
T  7436766 gatgaggaaaatgaagaaaagttaggtggtagtggtacatcctaagataaaatagatatgtgtaatccaacggtcctctttt 7436685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 148 - 321
Target Start/End: Original strand, 7753334 - 7753507
Alignment:
Q  148 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatgg-----ttctcttttaaaa 242  Q
    |||| |||||||||||||||||||| | | |||||||||| || | ||| |||||||||| |||| | |  |||| ||||||     ||||||||    |    
T  7753334 aaggaagaagatgaagaaaaggaaataaaattaggtgttgttgattcattgtaagataaactagattcgcataattcaatggtagcattctcttt----a 7753429  T
Q  243 gaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||||||||| ||||| ||||||||| |||||||| | ||||||||||| |||    || |||| ||||||||||||||    
T  7753430 gaaaaatcaagcggtttaaattaaaa-aattaatacggtctatggtggatcacctacaatgttgatccaccatatacat 7753507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 273 - 314
Target Start/End: Original strand, 16295150 - 16295191
Alignment:
Q  273 taataggatctatggtggaccactcttaaagttggtccacca 314  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  16295150 taataggatctatggtggaccactgttaaggttggtccacca 16295191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 17460691 - 17460764
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| |||||| | |||||| ||||||    ||||||||||||||||| |||||||||||    
T  17460691 atttatttgggaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaa 17460764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 391 - 430
Target Start/End: Complemental strand, 249091 - 249052
Alignment:
Q  391 catttttattaattgtgggaccaaaatgaaaataagaaat 430  Q
    |||||||||||| | |||||||||||||||||||||||||    
T  249091 catttttattaaatatgggaccaaaatgaaaataagaaat 249052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Original strand, 7983590 - 7983653
Alignment:
Q  232 ctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    ||||||||||  |||||||||| || ||||||| ||| | |||||| |||||||||||||||||    
T  7983590 ctcttttaaagaaaaaatcaaaaggatgaaatttaaaaatttaataagatctatggtggaccac 7983653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Original strand, 12359714 - 12359769
Alignment:
Q  377 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||| ||||||||| |||||||||||||||||| |||| ||||| | |||||||    
T  12359714 agggaccaaaacgccaattttattaattgtgggactaaaacgaaaacatgaaatta 12359769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 314
Target Start/End: Complemental strand, 30748704 - 30748621
Alignment:
Q  232 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacca 314  Q
    ||||||||| | |||| |||||||  || |||||||||||||||||| |||||||||||  |||||||||| ||| || |||||    
T  30748704 ctcttttaataaaaaagatcaaacaatttaaattaaaataattaatatgatctatggtgtgccactcttaaggtttgttcacca 30748621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 321
Target Start/End: Complemental strand, 34513149 - 34512947
Alignment:
Q  125 agttgaagatgatgaagatttataaggtagaagatgaagaa--aaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaat 222  Q
    |||||||||||||||| |||  |||||||||||||||||||  || |||||| | |||| ||||| ||||||| |||||| |  ||||||| ||   |||    
T  34513149 agttgaagatgatgaaaattagtaaggtagaagatgaagaaagaaagaaaaata-ttagttgttgttggtacaccgtaagttgcaatagacatgcacaat 34513051  T
Q  223 ccaatgg----ttctcttttaaaagaa-aaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatat 317  Q
     |||  |    || | |||||||| || ||||||||  ||| ||||||||| | |||||| | | ||||||||||||||||||  |||| ||||||||||    
T  34513050 tcaaatgtcattttttttttaaaaaaacaaatcaaatagtttaaattaaaaaatttaataaggtatatggtggaccactcttatggttgatccaccatat 34512951  T
Q  318 acat 321  Q
    ||||    
T  34512950 acat 34512947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 23232380 - 23232330
Alignment:
Q  244 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||||||||| ||||||||| |||||||| | | ||||||||||||    
T  23232380 aaaaatcaaacggttaaaattaaaagaattaataaggtttatggtggacca 23232330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 288
Target Start/End: Original strand, 16290705 - 16290742
Alignment:
Q  251 aaacggttgaaattaaaataattaataggatctatggt 288  Q
    ||||| || |||||||||||||||||||||||||||||    
T  16290705 aaacgatttaaattaaaataattaataggatctatggt 16290742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 221 - 313
Target Start/End: Original strand, 25570753 - 25570846
Alignment:
Q  221 atccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 313  Q
    ||||||||||| || |||||||| ||| |||||||  || ||| ||||||| |||||| | |||||||||||||||   |||||||||| ||||    
T  25570753 atccaatggttttcattttaaaaaaaagatcaaacctttaaaaataaaatatttaataaggtctatggtggaccacctataaagttggttcacc 25570846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 178 - 308
Target Start/End: Original strand, 30749161 - 30749293
Alignment:
Q  178 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa--aagaaaaatcaaacggttgaaattaaaataattaa 275  Q
    |||| ||||| |||| || ||||||||| | ||||| ||  | ||| || ||| |||||||||  || ||| |||| |||||| ||||||||||||||||    
T  30749161 ttagatgttgttggttcaccgtaagatacagtagacatgcatgatctaacggtcctcttttaatcaaaaaagatcatacggtttaaattaaaataattaa 30749260  T
Q  276 taggatctatggtggaccactcttaaagttggt 308  Q
    ||||  || | ||| ||||||||||| ||||||    
T  30749261 taggccctgtagtgaaccactcttaaggttggt 30749293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 422
Target Start/End: Original strand, 7437813 - 7437841
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||||||||||||||    
T  7437813 ttttattaattgtgggaccaaaatgaaaa 7437841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 187; Significance: 1e-101; HSPs: 31)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 153 - 435
Target Start/End: Complemental strand, 17837920 - 17837639
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 252  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||| ||  ||||||||||||| || |||  ||||||||||||    
T  17837920 agaagatgaagaaaaggacaaaaaattagatgttggtggtacatcgtaagataaaatagacctgcctaatccaatggttatcgtttttaagaaaaatcaa 17837821  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattt 352  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||  |||| ||||    
T  17837820 acggttgaaattaaaataattaataggatctatggtggaccactcttaatgtttgtccaccatagacatcatttggggttaaacttaactgttgg-attt 17837722  T
Q  353 atttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||||||||||||||||  | |||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||    
T  17837721 atttggtaaacggaagaaaagatgagggactaaaacgccatttttattaattgtggaaccaaaatgaaaacaataaattaaat 17837639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 153 - 435
Target Start/End: Original strand, 29381542 - 29381823
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 252  Q
    |||||||||||||||||| ||| | |||| ||||||||||||||||||||||||||||||| ||  ||||||||||||| ||||||  || |||||||||    
T  29381542 agaagatgaagaaaaggacaaaaaattagatgttggtggtacatcgtaagataaaatagacctgcctaatccaatggttatctttttgaaaaaaaatcaa 29381641  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattt 352  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||| ||| |||||||| | ||||||||||||||||||||||||  |||| ||||    
T  29381642 acggttgaaattaaaataattaataggatctatggtggatcactcttaaggtttgtccaccacagacatcatttggggttaaacttaactgttgg-attt 29381740  T
Q  353 atttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||||||| |||||  | | ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  29381741 atttggtaaacggaggaaaagatgaaggactaaaacgtcatttttattaattgtgggatcaaaatgaaaataagaaattaaat 29381823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 152 - 435
Target Start/End: Original strand, 5187433 - 5187715
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    ||||||||||||||||| ||||| | |||||||||| ||||||||  ||||||||||||||  ||  |||||||||| | ||||||||||| ||||||||    
T  5187433 tagaagatgaagaaaagaaaaaaaaattaggtgttgatggtacatgataagataaaatagagctgcttaatccaatgatgctcttttaaaataaaaatca 5187532  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||| ||||||||||| |||||||||||||||||||||| |||||| |||| |||||||||| ||| ||| ||||| ||||||||||||||| |  | |||    
T  5187533 aacagttgaaattaatataattaataggatctatggtgaaccacttttaaggttggtccactatagacaacattt-gggttaaacttaaccgtcaggatt 5187631  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||| |||||||  |||| |||||| |||||||||||||||||||||||| ||||||||||||||||| | ||||||||||    
T  5187632 tatttggcaaacggacaaaaaggtaaggaactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaattaaat 5187715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 152 - 435
Target Start/End: Original strand, 18346563 - 18346843
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    |||||||||||||||| |||| | ||| |||||||||||||||||||||||||||||||||||||  |||||||||||||  ||||||||| ||||||||    
T  18346563 tagaagatgaagaaaatgaaacaaatt-aggtgttggtggtacatcgtaagataaaatagacttgcataatccaatggtttacttttaaaa-aaaaatca 18346660  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||| |||||||||||||||||||||| ||| ||||||||||||||| |||||| |||| || |||||||||| ||||||| |||| || | | |||    
T  18346661 aacggtttaaattaaaataattaataggatttatagtggaccactcttaaggttggttcaccgtaaacatcatttgaggttaaaattaa-cagtcggatt 18346759  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||| |||| ||   ||| || |||||  ||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  18346760 tatttggcaaacagagacaaacgtgagggatcaaaacgccatttttattaattgtgggaccaaaatgaaaatatgaaattaaat 18346843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 153 - 435
Target Start/End: Complemental strand, 23392520 - 23392237
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaat--c 250  Q
    |||||||||||||||| |||   | ||| |||||| ||||  |  |||||||||||||||||||  ||||| ||||||| |||||||||| ||||||  |    
T  23392520 agaagatgaagaaaagaaaattaaattacgtgttgttggtttacagtaagataaaatagacttgcataatctaatggttatcttttaaaaaaaaaatatc 23392421  T
Q  251 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 350  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||| ||  |||||||||||||||||||||||  || | ||    
T  23392420 aaacggttgaaattaaaataattaataggatctatggtggaccacttttaaggttgatccaccttag-catcatttggggttaaacttaacatttaggat 23392322  T
Q  351 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||| ||||||| ||||| || ||||||| |||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  23392321 ttatttggcaaacggaggaaaaggtgagggacttaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaat 23392237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 255 - 435
Target Start/End: Complemental strand, 29380391 - 29380214
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 354  Q
    |||| ||||||| | |||||||| | |||| | ||||| ||| |||| |||| ||||||||||||||   |||  |||||| |||||  | || ||||||    
T  29380391 ggttaaaattaacaaaattaataaggtctacgatggactacttttaaggttgatccaccatatacat---ttgaagttaaaattaacggtcgggatttat 29380295  T
Q  355 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||| ||||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  29380294 ttggcaaacggaagaaaaggtgagggactaaaacgccatttttgttaattgtgggaccaaaatgaaaacaagaaattaaat 29380214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 182 - 422
Target Start/End: Original strand, 7311565 - 7311804
Alignment:
Q  182 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaa-agaaaaatcaaacggttgaaattaaaataattaatagga 280  Q
    |||||| |||| || |||||||||||||| |  | ||| |||||| ||| ||  |||||| | ||||||||||||||| |||||||||||||||||||||    
T  7311565 gtgttgatggttcaacgtaagataaaatacatctatgtgatccaacggtcctgctttaaacaaaaaaatcaaacggtttaaattaaaataattaatagga 7311664  T
Q  281 tctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaaggg 380  Q
    | ||||||||||||||||||| |||||| ||||||| ||||||||| || |||||||||||  |  | |||||||||| |||  ||  |||| |||||||    
T  7311665 tttatggtggaccactcttaaggttggttcaccatagacatcattt-ggattaaacttaactgtgaggatttatttggcaaatagataaaaaagtaaggg 7311763  T
Q  381 actaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    || |||| |  |  |||||||||||||||| |||||||||||    
T  7311764 accaaaa-ggtacgtttattaattgtgggatcaaaatgaaaa 7311804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 153 - 341
Target Start/End: Complemental strand, 11723090 - 11722903
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 251  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || ||||||| |||||| || ||||||||||||||   ||| |||||||| ||||||||    
T  11723090 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagagaaaatacacctgtgtaatccaatgaccctccttttaaaaaaaaaatca 11722991  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||| |||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||  || ||||||||| |||||    
T  11722990 aacggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat--ttgggggttaaagttaac 11722903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 255 - 435
Target Start/End: Original strand, 23397270 - 23397447
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 354  Q
    |||| ||||||| | |||||||| | | || ||||||| ||| |||| |||||||||||||| ||||   |||  |||||| |||||  | || ||||||    
T  23397270 ggttaaaattaacaaaattaataaggtatacggtggactacttttaaggttggtccaccatagacat---ttgaagttaaatttaacggtcgggatttat 23397366  T
Q  355 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  23397367 ttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaat 23397447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 349 - 435
Target Start/End: Original strand, 17839146 - 17839232
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| ||||||| ||||| || |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  17839146 atttatttggcaaacggaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacaagaaattaaat 17839232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 6701489 - 6701403
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| ||||||| |||||||| |||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||    
T  6701489 atttatttggcaaacggaggaaaatgtgagggactaaaataccatttttattaattgtgggaccaaaatgaaaatatgaaattaaat 6701403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 323 - 435
Target Start/End: Original strand, 6702852 - 6702963
Alignment:
Q  323 atttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||| ||||||||||||  |  | |||||||||| ||||||| ||||| || ||||| ||||||||||||||||||||||||||||||||||||||||    
T  6702852 atttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgaggga-taaaacgccatttttattaattgtgggaccaaaatgaaaa 6702950  T
Q  423 taagaaattaaat 435  Q
    || ||||||||||    
T  6702951 tatgaaattaaat 6702963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 2687339 - 2687253
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| ||||||| |||||||| | |||||||||||||||||||||||||||||||| ||||||||||| | ||||||||||    
T  2687339 atttatttggcaaacggaggaaaatgtgaaggactaaaacgccatttttattaattgtgggatcaaaatgaaaacatgaaattaaat 2687253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 283 - 435
Target Start/End: Original strand, 32506969 - 32507119
Alignment:
Q  283 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattg-gaatttatttggtaaacggaagaaaatgtaaggga 381  Q
    |||||| |||||||||||| |||||||||||||| | ||   |||||||||||||||||  |   | |||||||||| |||| ||  ||||||| |||||    
T  32506969 tatggtagaccactcttaaggttggtccaccatagatat---ttggggttaaacttaacagtcaaggatttatttggcaaactgagaaaaatgtgaggga 32507065  T
Q  382 ctaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||| ||||||||||||| ||||||| ||||||||||| | ||||||||||    
T  32507066 ctaaaacaccatttttattaaatgtgggatcaaaatgaaaacatgaaattaaat 32507119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 349 - 435
Target Start/End: Original strand, 2687931 - 2688017
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| |||||||  |||| || ||||||||||||||||||||||||||||||||||| |||||||||| | ||||||||||    
T  2687931 atttatttggcaaacggataaaaaggtgagggactaaaacgccatttttattaattgtgggactaaaatgaaaacatgaaattaaat 2688017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 29722772 - 29722686
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||  ||| ||| |||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| | ||||||||||    
T  29722772 atttatttgcaaaatggaggaaaatgtgagggactaaaacgccatttttattaattatgggatcaaaatgaaaacatgaaattaaat 29722686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 273 - 423
Target Start/End: Complemental strand, 12669906 - 12669758
Alignment:
Q  273 taataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgga-atttatttggtaaacggaagaaa 371  Q
    ||||| ||||||||||||||||||||||| |||||||||||||| |   |||||| ||||||| |||||  || || |||||||| | ||||||| ||||    
T  12669906 taatatgatctatggtggaccactcttaaggttggtccaccataca---catttgaggttaaagttaacagttagagatttatttagcaaacggaggaaa 12669810  T
Q  372 atgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaat 423  Q
    | || | ||||||||||   | |||||||||||||| ||||||||| |||||    
T  12669809 aagtgacggactaaaacttgagttttattaattgtgagaccaaaataaaaat 12669758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 153 - 321
Target Start/End: Complemental strand, 11967523 - 11967351
Alignment:
Q  153 agaagatgaagaaaaggaa--aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa--- 247  Q
    ||||||||||||||||| |  ||| | |||||||||| |||| || | | ||||||||| ||||||  ||||| ||||||  |||||| ||| ||||       
T  11967523 agaagatgaagaaaaggtacaaaaaaattaggtgttgatggtgcaccattagataaaat-gacttgcttaatcaaatggtcatctttttaaaaaaaatta 11967425  T
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||||| ||| |||||||||||||||||| |||||||| |||||| |||| || |||||||||| ||| ||||    
T  11967424 atcaaacagtttaaattaaaataattaatatgatctatgatggacccctctcaaggttggtccacaatagacat 11967351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 5186677 - 5186591
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| ||||||| |||||  | | ||| ||||||| || |||||||||||||| |||||||||||||| | ||||||||||    
T  5186677 atttatttggcaaacggaggaaaagatgatggattaaaacgtcacttttattaattgtgtgaccaaaatgaaaacatgaaattaaat 5186591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 377 - 435
Target Start/End: Original strand, 12256619 - 12256677
Alignment:
Q  377 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||||||| |||||||||||||||| |||||||| ||||| | ||||||||||    
T  12256619 agggactaaaacgctatttttattaattgtgcgaccaaaacgaaaacatgaaattaaat 12256677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 232405 - 232316
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 242  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||||| || ||||||||||||||||| |||||||    
T  232405 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaatagacatgcgtaatccaatggttctcctttaaaa 232316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 344 - 422
Target Start/End: Complemental strand, 232288 - 232212
Alignment:
Q  344 ttggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||| |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| |||||||||||||||||    
T  232288 ttgggatttatttggcaaacggaggaaaaagtgagggactaaaacg--tgttttattaattatgggaccaaaatgaaaa 232212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 153 - 228
Target Start/End: Complemental strand, 1367642 - 1367567
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatg 228  Q
    |||||||||||||||||||| | | |||  |||||||||||||||| |||||| |||| || || || ||||||||    
T  1367642 agaagatgaagaaaaggaaacaaagttatatgttggtggtacatcgcaagatataatacacatgcgtgatccaatg 1367567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 432
Target Start/End: Original strand, 27082195 - 27082234
Alignment:
Q  393 tttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  27082195 tttttattaattgtgggaccaaaatgaaaattcgaaatta 27082234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 15730036 - 15730110
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacg-ccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||| | ||||||||||||| || |||||| |||| |    ||||||||||||||||||||||||||||||    
T  15730036 atttatttagcaaacggaagaaaaagtgagggaccaaaatgtatttttttattaattgtgggaccaaaatgaaaa 15730110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 432
Target Start/End: Original strand, 34024116 - 34024154
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  34024116 ttttattaattgtgggaccaaaatgaaaatttgaaatta 34024154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 242
Target Start/End: Original strand, 233454 - 233543
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 242  Q
    ||||||||||||||  |||||  | |||| ||||| || | ||  |||||||||||||||| |||||||||||||||  ||| |||||||    
T  233454 agaagatgaagaaagagaaaattaattagatgttgttgattcactgtaagataaaatagacatgtgtaatccaatggccctcctttaaaa 233543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 422
Target Start/End: Original strand, 233599 - 233644
Alignment:
Q  377 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||   |||||||||||| |||||||||||||||||    
T  233599 agggactaaaacgtgttttttattaattatgggaccaaaatgaaaa 233644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 6452393 - 6452320
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| | ||||||||| |||||    
T  6452393 atttatttggcaaacggaggaaaaagtgagggactaaaacgtaccttttattaattataggaccaaaacgaaaa 6452320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 6452518 - 6452591
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| |||||  | ||||||| |||||    ||||||||||| |||||||||||||||||    
T  6452518 atttatttggcaaacggaggaaaaaatgagggactcaaacgtacgttttattaattatgggaccaaaatgaaaa 6452591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 220 - 313
Target Start/End: Original strand, 7312923 - 7313016
Alignment:
Q  220 aatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacc 313  Q
    |||||||||||||||| ||  || ||||||||||| ||| ||||||||| ||||| ||    ||||||||||||||   ||| |||||||||||    
T  7312923 aatccaatggttctctatttgaacaaaaatcaaacagtttaaattaaaaaaattattaaagcctatggtggaccacatataatgttggtccacc 7313016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 175; Significance: 6e-94; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 175; E-Value: 6e-94
Query Start/End: Original strand, 121 - 435
Target Start/End: Original strand, 13564020 - 13564332
Alignment:
Q  121 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgta 220  Q
    ||||||||||||||||||||||||  ||| |  ||||||||||||| ||||||  ||| |||||||||| ||||||| |||| |||||||||| ||| ||    
T  13564020 tgtgagttgaagatgatgaagattattaaaggggaagatgaagaaagggaaaataatt-aggtgttggtagtacatcataagctaaaatagacatgtcta 13564118  T
Q  221 atccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatataca 320  Q
    |||||||||||||||||| ||| || |||| ||||||| |||||||||||||||||||||||||||||||||||||||||| | || ||||||||| |||    
T  13564119 atccaatggttctctttttaaaaaataatctaacggttcaaattaaaataattaataggatctatggtggaccactcttaaggatgatccaccatagaca 13564218  T
Q  321 tcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaa 420  Q
    | |||||||||||||||||| | | || |||||||||| ||||||| |||||||| |||||||||||||||| |||||||||||||||||||||||||||    
T  13564219 ttatttggggttaaacttaa-cgtcgggatttatttggcaaacggaggaaaatgtgagggactaaaacgccagttttattaattgtgggaccaaaatgaa 13564317  T
Q  421 aataagaaattaaat 435  Q
    || ||||||||||||    
T  13564318 aacaagaaattaaat 13564332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 154 - 432
Target Start/End: Complemental strand, 32255290 - 32255015
Alignment:
Q  154 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 253  Q
    |||||||||||||||||||||   ||||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||||||| || ||||||||||    
T  32255290 gaagatgaagaaaaggaaaaaa--ttaggtgttggtggtacatcgtaagattaaatagacctgtctaatccaatggttatcttttacaa-aaaaatcaaa 32255194  T
Q  254 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattta 353  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||| | || |||||    
T  32255193 cggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccataaacatcatttggggttaaacttaaccgtcgggattta 32255094  T
Q  354 tttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||| ||||||| ||||| || |||||  |||| |    ||||||||||| |||||||||||| |||||  |||||||    
T  32255093 tttggcaaacggaggaaaaagtgagggatcaaaatgtacgttttattaattatgggaccaaaataaaaatttgaaatta 32255015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 133; E-Value: 7e-69
Query Start/End: Original strand, 152 - 435
Target Start/End: Complemental strand, 22537862 - 22537582
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    |||||||||||||||| |||||| | ||||||||||||||| |||||||||||||||||||| ||  |||||||||||||| |||||||||  |||||||    
T  22537862 tagaagatgaagaaaatgaaaaaaaattaggtgttggtggttcatcgtaagataaaatagacctgcataatccaatggttcccttttaaaa--aaaatca 22537765  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||| |||||| |||| || |||||||||| ||||||| |||||  |||| |||    
T  22537764 aacggtttaaattaaaataattaataggatctatggtggatcactattaaggttggttcaccgtaaacatcatttgaggttaaaattaacagttgg-att 22537666  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||| |||| ||   ||| || |||||  |||| | |||||||| |||||||||||||||||||||||||  |||||||||    
T  22537665 tatttggcaaacagagacaaacgtgagggatcaaaatgtcatttttagtaattgtgggaccaaaatgaaaatataaaattaaat 22537582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 161 - 435
Target Start/End: Complemental strand, 22336274 - 22336002
Alignment:
Q  161 aagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttga 260  Q
    ||||||||||||   | |||||||||| ||||  |  |||||||||||||||||||   |||| ||||||| |||||| ||| ||| ||||| |||||||    
T  22336274 aagaaaaggaaattaaattaggtgttgttggtttacagtaagataaaatagacttgcacaatctaatggttatctttttaaaaaaatatcaa-cggttga 22336176  T
Q  261 aattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggta 360  Q
    |||||||||||||||||||||||||||||||||||| |||| |||| |||||||||  |||||||||||||||||||||||  | || |||||||||| |    
T  22336175 aattaaaataattaataggatctatggtggaccacttttaaggttgatccaccatag-catcatttggggttaaacttaacattcgggatttatttggca 22336077  T
Q  361 aacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||| || ||||| || |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  22336076 aactgaggaaaaggtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacacgaaattaaat 22336002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 152 - 432
Target Start/End: Original strand, 11502235 - 11502512
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    |||||||||||||||||||||||   | |||||||||| |||||| ||||||||||||| || ||  |||||||||||||||||||| |||  |||||||    
T  11502235 tagaagatgaagaaaaggaaaaaa--tcaggtgttggtcgtacat-gtaagataaaataaacctgcctaatccaatggttctctttttaaaagaaaatca 11502331  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||| ||||||||||||||||| |||||||||||||||||||||||||| ||||||| |||||| |||||||||| |||||||||||||  |||| |||    
T  11502332 aacggctgaaattaaaataattactaggatctatggtggaccactcttaaggttggtctaccatagacatcatttgaggttaaacttaactgttgggatt 11502431  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||| |||| ||  ||||  | |||||||||  ||| ||||||||||| ||||||| ||||||||||| | |||||||    
T  11502432 tatttggcaaacagagcaaaagttgagggactaattcgcaatttttattaaatgtgggatcaaaatgaaaacatgaaatta 11502512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 154 - 422
Target Start/End: Original strand, 43460636 - 43460903
Alignment:
Q  154 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaa 253  Q
    ||||||||||||||||||||| | ||| |||||| |||| ||  ||||||||||||| || |  || ||  || ||| |||  || ||  ||| ||||||    
T  43460636 gaagatgaagaaaaggaaaaaaagttaagtgttgatggttcaatgtaagataaaatatacctacgtgatttaacggtcctccatttaataaaagatcaaa 43460735  T
Q  254 cggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattta 353  Q
     |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| | ||||||||||||  |  | |||||    
T  43460736 gggtttaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatagacataattt-gagttaaacttaactgtgaggattta 43460834  T
Q  354 tttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||| ||| ||| ||||| || ||||||||||| |    |||||||||||||||||||||||||||||    
T  43460835 tttggcaaatggaggaaaaagtgagggactaaaatgtacgttttattaattgtgggaccaaaatgaaaa 43460903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 152 - 341
Target Start/End: Complemental strand, 46835980 - 46835791
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt-aaaagaaaaatc 250  Q
    ||||||||||| |||||| |||| ||| || |||||||||||||||||| |||||||||||||||| |||| ||||  ||||||||| |||| ||||||     
T  46835980 tagaagatgaataaaagggaaaaaattaag-tgttggtggtacatcgtatgataaaatagacttgtctaatacaataattctcttttaaaaataaaaatt 46835882  T
Q  251 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    || | ||| |||||||||||||||||||||| |||||| |||||   ||||   || ||||||||| ||||||||||||||||||||||||    
T  46835881 aatcagtttaaattaaaataattaataggatatatggtagaccaactttaagaatgatccaccataaacatcatttggggttaaacttaac 46835791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 192 - 321
Target Start/End: Complemental strand, 44372994 - 44372864
Alignment:
Q  192 tacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtgg 290  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||  ||||||||||||||||||||||||||||||    
T  44372994 tacatcctaagataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtgg 44372895  T
Q  291 accactcttaaagttggtccaccatatacat 321  Q
    ||||||||||| ||| |||||| ||| ||||    
T  44372894 accactcttaatgttagtccactatagacat 44372864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 192 - 321
Target Start/End: Complemental strand, 44381850 - 44381720
Alignment:
Q  192 tacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtgg 290  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||  ||||||||||||||||||||||||||||||    
T  44381850 tacatcctaagataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtgg 44381751  T
Q  291 accactcttaaagttggtccaccatatacat 321  Q
    ||||||||||| ||| |||||| ||| ||||    
T  44381750 accactcttaatgttagtccactatagacat 44381720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 153 - 422
Target Start/End: Original strand, 47060288 - 47060555
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 251  Q
    ||||||| |||||| ||| ||| | |||||||||| ||  ||| | |||||||||||| ||||||||||| |||||||  || |||||||| | ||||||    
T  47060288 agaagataaagaaagggagaaataattaggtgttgttgacacaccataagataaaatacacttgtgtaattcaatggtcatccttttaaaaaacaaatca 47060387  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    |||| || || || ||| | |||||| | |||||||||||| | |||||| ||||||||||||||||   ||||||| ||||||||||||  |  | |||    
T  47060388 aacgattaaattttaaaaatttaataaggtctatggtggactattcttaaggttggtccaccatata---catttggtgttaaacttaacagtccggatt 47060484  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||| |||||||| |||  || |||||| ||||||    ||||||||||| | |||||||||||||||    
T  47060485 tatttggcaaacggaaaaaagggtgagggaccaaaacgtacgttttattaattataggaccaaaatgaaaa 47060555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 330 - 435
Target Start/End: Complemental strand, 13562950 - 13562845
Alignment:
Q  330 gttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaa 429  Q
    |||||| ||||| || || ||||||||||||||| ||  ||||||| ||||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  13562950 gttaaagttaacaatcgggatttatttggtaaacagagaaaaatgtgagggactaaaacgccatttttattacttgtgggaccaaaataaaaacaagaaa 13562851  T
Q  430 ttaaat 435  Q
    ||||||    
T  13562850 ttaaat 13562845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 248 - 373
Target Start/End: Complemental strand, 40811529 - 40811405
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    ||||||||||| |||||||||  |||||||| |||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| |||||| |  |    
T  40811529 atcaaacggtttaaattaaaaatattaatagaatctatggtggaccactcttaaggttggtccaccatagacatcattt-gggttaaagttaaccgtcag 40811431  T
Q  348 aatttatttggtaaacggaagaaaat 373  Q
     |||||||| ||| ||||| ||||||    
T  40811430 gatttatttagtatacggaggaaaat 40811405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 197 - 321
Target Start/End: Complemental strand, 43441605 - 43441481
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||| ||||| |||||||||| ||  || ||||||| ||| ||||||| ||| | |||||||||||||||||||  ||||||||||||||    
T  43441605 cgtaagataaaatacacttgcgtaatccaatagtcatcctttaaaaaaaatatcaaacagtttacattaaaataattaataggacttatggtggaccact 43441506  T
Q  297 cttaaagttggtccaccatatacat 321  Q
    ||||| |||||| ||||||| ||||    
T  43441505 cttaaggttggtacaccatagacat 43441481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 248 - 432
Target Start/End: Complemental strand, 3413740 - 3413558
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatt-g 346  Q
    ||||||||||| ||||| ||| |||||||    |||||||||||| ||||||||  ||| ||||||||| |||||   ||  ||||||||||||  || |    
T  3413740 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggacaactcttaagattgatccaccatagacatc---tgaagttaaacttaacagttag 3413644  T
Q  347 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    | |||||||||| |||| ||  |||| || |||||||||||||||||||||||||||||| ||||||||||||||| | |||||||    
T  3413643 ggatttatttggcaaacagagtaaaaggtgagggactaaaacgccatttttattaattgtaggaccaaaatgaaaacacgaaatta 3413558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 235 - 314
Target Start/End: Complemental strand, 35295920 - 35295841
Alignment:
Q  235 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccacca 314  Q
    |||||||| | | ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  35295920 ttttaaaatatagatcaaacggtttaaattaaaataattaataggatctatggtggaccactcttaaggttggtccacca 35295841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 198 - 321
Target Start/End: Complemental strand, 16756128 - 16756006
Alignment:
Q  198 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactc 297  Q
    ||||||||||||| ||||| |||||| |||||| ||| ||| ||| |||||||||| |||| ||||||||||||||||||||||||||||| ||| |||     
T  16756128 gtaagataaaatacacttgcgtaatctaatggtcctccttttaaa-aaaaatcaaatggttaaaattaaaataattaataggatctatggtagacaactt 16756030  T
Q  298 ttaaagttggtccaccatatacat 321  Q
    |||| |||| | ||||||| ||||    
T  16756029 ttaaggttgtttcaccatagacat 16756006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 341
Target Start/End: Complemental strand, 39981529 - 39981434
Alignment:
Q  244 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||||||||||| |||||| |||||||||| ||||||||||||||||| | ||||||||||||||||||| ||||  || ||||||||| |||||    
T  39981529 aaaaatcaaacggtttaaattagaataattaattggatctatggtggaccatttttaaagttggtccaccatagacat--ttgggggttaaagttaac 39981434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 41328478 - 41328336
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||| |  || ||||||||| |   ||| ||| ||| ||| ||||||||||| |||||| |||||||||||||||||||||||||||| |    
T  41328478 cgtaagataaaatacatatgcgtaatccaacgaccctccttttaaaaaaatatcaaacggtttaaattagaataattaataggatctatggtggaccatt 41328379  T
Q  297 cttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
     ||||||||| ||||||||| ||||  || ||||||||| |||||    
T  41328378 tttaaagttgttccaccatagacat--ttgggggttaaagttaac 41328336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 323 - 435
Target Start/End: Original strand, 22538829 - 22538941
Alignment:
Q  323 atttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||| |||||| |||||| | |  |||||||||| ||||||| |||||  | ||||||||||||| |||||||||||||||||||||||||| |||||    
T  22538829 atttggagttaaagttaaccgtcgagatttatttggcaaacggaggaaaagatgagggactaaaacgtcatttttattaattgtgggaccaaaaagaaaa 22538928  T
Q  423 taagaaattaaat 435  Q
     | ||||||||||    
T  22538929 catgaaattaaat 22538941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 281 - 422
Target Start/End: Original strand, 40509675 - 40509814
Alignment:
Q  281 tctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgga--atttatttggtaaacggaagaaaatgtaag 378  Q
    ||||||||||||||||||||| |||||||||| ||| ||||   ||||||||||||||||| |  | |  |||||||||||||||||| ||||| || ||    
T  40509675 tctatggtggaccactcttaaggttggtccactatagacat---ttggggttaaacttaac-accgaatgatttatttggtaaacggaggaaaaagtgag 40509770  T
Q  379 ggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    | ||| |||||    |||||||||||||||||||||||||||||    
T  40509771 gaacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 40509814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 249 - 341
Target Start/End: Complemental strand, 46201338 - 46201249
Alignment:
Q  249 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    |||||| ||| | |||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| |   ||||||||||||||||||||    
T  46201338 tcaaacagtttatattaaaataattaatatgatctatggtggaccactcttaaggttggttcaccataga---catttggggttaaacttaac 46201249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 24844397 - 24844284
Alignment:
Q  322 catttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 421  Q
    |||||| |||||||||||||  |  | |||||||||| |||||||||||||||| ||||||||||||||||||| |||||||||| | || ||||| |||    
T  24844397 catttgaggttaaacttaacagtgaggatttatttggcaaacggaagaaaatgtgagggactaaaacgccatttgtattaattgtagaacaaaaataaaa 24844298  T
Q  422 ataagaaattaaat 435  Q
    | |  |||||||||    
T  24844297 acataaaattaaat 24844284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 200 - 321
Target Start/End: Original strand, 30334503 - 30334622
Alignment:
Q  200 aagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactctt 299  Q
    |||||||||||||| || |||||||||  || ||| || |||| ||||||| ||||||| ||||||||| |||||||||||||||||||||||   ||||    
T  30334503 aagataaaatagacatgggtaatccaagcgtcctccttaaaaa-aaaaatctaacggtttaaattaaaa-aattaataggatctatggtggactgttctt 30334600  T
Q  300 aaagttggtccaccatatacat 321  Q
    ||||||||||| ||||| ||||    
T  30334601 aaagttggtcctccatagacat 30334622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 291 - 433
Target Start/End: Complemental strand, 11501344 - 11501205
Alignment:
Q  291 accactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgc 390  Q
    |||||| |||| |||||||||||||| ||||   |||  |||||| |||||  | || |||||||||| ||| ||| ||||| || ||||||||||| ||    
T  11501344 accacttttaaggttggtccaccatagacat---ttgaagttaaagttaacagtcgggatttatttggcaaatggaggaaaaggtgagggactaaaatgc 11501248  T
Q  391 catttttattaattgtgggaccaaaatgaaaataagaaattaa 433  Q
     ||||||||||| ||||||||||||||||||| | ||||||||    
T  11501247 tatttttattaactgtgggaccaaaatgaaaacatgaaattaa 11501205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 3414841 - 3414924
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||| ||| ||| ||||| || | |||||||||||||||||||||||||| ||||||||||||||||| | |||||||    
T  3414841 atttatttggcaaatggaggaaaaagtgaaggactaaaacgccatttttattaattatgggaccaaaatgaaaacatgaaatta 3414924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 281 - 422
Target Start/End: Original strand, 22115105 - 22115244
Alignment:
Q  281 tctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgga--atttatttggtaaacggaagaaaatgtaag 378  Q
    ||||||||||||||||||||| |||||||||| ||| |   ||||||||||||||||||| ||  | |  ||||||||||| |||||| ||||| || ||    
T  22115105 tctatggtggaccactcttaaggttggtccactataga---catttggggttaaacttaa-caccgaangatttatttggtnaacggaggaaaaagtgag 22115200  T
Q  379 ggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    | ||| |||||    |||||||||||||||||||||||||||||    
T  22115201 gaacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 22115244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 435
Target Start/End: Original strand, 22337378 - 22337463
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| ||||||| |||||||||||||||| ||  |||||||||||||||||||||| ||||||||||| | |||| |||||    
T  22337378 atttatttggcaaacggaggaaaatgtaagggactgaat-gccatttttattaattgtgggatcaaaatgaaaacatgaaactaaat 22337463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 121 - 341
Target Start/End: Complemental strand, 25533523 - 25533306
Alignment:
Q  121 tgtgagttgaagatgatgaagatttataaggtagaagatgaaga---aaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgt 217  Q
    ||||||||||||||||||||||||  ||||||||||||||||||   ||||| |||| | |||   |||| |||||||  ||||| || ||||||| ||     
T  25533523 tgtgagttgaagatgatgaagattagtaaggtagaagatgaagaaagaaagggaaaaaaatta---gttgttggtacacggtaagttataatagacatgc 25533427  T
Q  218 gtaatccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 316  Q
     ||||| ||||||  || |||||||| | | ||||||||||| ||||| ||| | |||||| | ||||| ||||||||| ||||||||| || ||| |||    
T  25533426 ataatcaaatggtcatctttttaaaaaatatatcaaacggtttaaatt-aaagatttaataaggtctatagtggaccacccttaaagttagttcactata 25533328  T
Q  317 tacatcatttggggttaaacttaac 341  Q
       | ||||||||||||||||||||    
T  25533327 ---agcatttggggttaaacttaac 25533306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 669297 - 669369
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||||||||| ||||||| | |||||||||||||||||||||||||||||| ||| |||||||||||| ||||    
T  669297 atcaaacggtttaaattaacaaaattaataggatctatggtggaccactctt-aagatggtccaccatagacat 669369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 198 - 422
Target Start/End: Complemental strand, 47059371 - 47059144
Alignment:
Q  198 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaa--aaatcaaacggttgaaatt--aaaataattaataggatctatggtggacc 293  Q
    ||||||||||||| || || |||||||||||||  || ||| ||| ||  | ||||||||||| |||||  |||| |||||||| | |||||||||| |     
T  47059371 gtaagataaaatacacatgcgtaatccaatggtcatccttttaaataaacagatcaaacggtttaaattaaaaaaaaattaataaggtctatggtgggct 47059272  T
Q  294 actcttaaagttggtccaccatatacatcatttg-gggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgcca 392  Q
    |||||||| |||| ||||||||| || |  || | ||||||||||||||  |  | |||||||||| ||||||| ||||| || |||||  ||||||       
T  47059271 actcttaaggttgctccaccatagactt--ttggagggttaaacttaacggtcaggatttatttggcaaacggaggaaaaagtgagggatcaaaacgtac 47059174  T
Q  393 tttttattaattgtgggaccaaaatgaaaa 422  Q
     ||||||||||||| |||||||||||||||    
T  47059173 attttattaattgtaggaccaaaatgaaaa 47059144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 2414957 - 2414890
Alignment:
Q  244 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtcca 311  Q
    |||| |||||||||| ||||||| | ||||||||||||||||||||||||||| |||| |||||||||    
T  2414957 aaaattcaaacggtttaaattaagaaaattaataggatctatggtggaccacttttaaggttggtcca 2414890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 283 - 422
Target Start/End: Complemental strand, 41078930 - 41078792
Alignment:
Q  283 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggac 382  Q
    |||||||||||| | ||||  ||||||||||||||||||||||| |||||||| |||||| | || ||||||| || ||| ||| |||||| ||| |||     
T  41078930 tatggtggaccatttttaagattggtccaccatatacatcattt-gggttaaagttaaccgtcgggatttattcggcaaatggaggaaaatctaaaggat 41078832  T
Q  383 taaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     ||||     ||||||| ||||||||||||||||||||||    
T  41078831 caaaagatactttttatcaattgtgggaccaaaatgaaaa 41078792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 197 - 294
Target Start/End: Complemental strand, 48312300 - 48312202
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||||||||||| || |||||||||||||  | ||||||||| |||| |||||||  || ||||||||| |||||||||||||||||||||||||    
T  48312300 cgtaagataaaatagacctgcgtaatccaatggtcatccttttaaaaaaaaagatcaaaccatttaaattaaaa-aattaataggatctatggtggacca 48312202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 233 - 421
Target Start/End: Complemental strand, 47454559 - 47454374
Alignment:
Q  233 tcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggtt 332  Q
    ||||| |||| ||||||||||||||| ||||||| | |||||||| | |||| | |||||||||||||| ||||||| |||||| |   ||||| | |||    
T  47454559 tctttaaaaaaaaaaatcaaacggttaaaattaataaaattaataaggtctacgatggaccactcttaaggttggtctaccataga---catttagagtt 47454463  T
Q  333 aaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 421  Q
    ||| ||||   | || |||||||||| ||||| |  ||||  | |||||| |||| |    ||||||||||||||||||||||||||||    
T  47454462 aaagttaatagtcgggatttatttggcaaacgaagaaaaacttgagggaccaaaatgtacgttttattaattgtgggaccaaaatgaaa 47454374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 248 - 422
Target Start/End: Complemental strand, 40508586 - 40508414
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac-cattg 346  Q
    ||||||||||| ||||| ||| |||||||   ||||||||||||| ||||||||  ||| ||||||||| |   |||||||| ||||||||||| |        
T  40508586 atcaaacggttaaaatttaaaaaattaatgaaatctatggtggacaactcttaagattgatccaccataga---catttgggattaaacttaacaccgaa 40508490  T
Q  347 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    | ||||||||||  |||||| ||||| || ||||||| |||||    |||||||||||||||||| ||||||||||    
T  40508489 ggatttatttggctaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggacaaaaatgaaaa 40508414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 288 - 422
Target Start/End: Original strand, 32256344 - 32256475
Alignment:
Q  288 tggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaa 387  Q
    ||||||||| |||| |||||||||||||| ||||   |||  |||||| |||||  ||||||||||||||| ||| ||| ||||| || |||||| ||||    
T  32256344 tggaccacttttaatgttggtccaccatagacat---ttgaagttaaagttaacggttggaatttatttggcaaatggaggaaaaagtgagggaccaaaa 32256440  T
Q  388 cgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     |    ||||||||||| |||||||||||||||||    
T  32256441 ggtacattttattaattatgggaccaaaatgaaaa 32256475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 24282983 - 24283065
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||| ||||||| |||||||| |||||||||| ||||  |||| |||||||||| ||||||||||||||  |||||||    
T  24282983 atttatttggcaaacggaggaaaatgtgagggactaaagcgcctgtttt-ttaattgtggaaccaaaatgaaaatctgaaatta 24283065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 43459564 - 43459491
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| |||||  | ||||||| ||||||   |||||||||||||||||||||||||||||    
T  43459564 atttatttggcaaacggaggaaaacatgagggacttaaacgcacgttttattaattgtgggaccaaaatgaaaa 43459491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 4167672 - 4167609
Alignment:
Q  232 ctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    ||||||||||  |||||||||| |||||||||| ||| | |||||| |||||||||||||||||    
T  4167672 ctcttttaaagaaaaaatcaaaaggttgaaatttaaaaatttaataagatctatggtggaccac 4167609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 422
Target Start/End: Original strand, 4299956 - 4300128
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    ||||||||||  ||||| ||| |||||||    |||||||||| |||||||||| |||| ||||| ||| || |   ||||||||||||||||| |  |     
T  4299956 atcaaacggtcaaaatttaaaaaattaatgaagtctatggtgggccactcttaaggttgatccactatagacgt---ttggggttaaacttaac-accga 4300051  T
Q  348 aa--tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||  ||||||||| |||| || ||||| || ||||||| |||||    |||||||||||||||||||||||||||||    
T  4300052 aagatttatttggcaaacagaggaaaaagtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 4300128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 263 - 321
Target Start/End: Complemental strand, 15992328 - 15992270
Alignment:
Q  263 ttaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||||||||||||||||||| ||||  | ||||||||| |||||||||||||| ||||    
T  15992328 ttaaaataattaataggatctttggtaaatcactcttaaggttggtccaccatagacat 15992270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 45454147 - 45454074
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| || ||||||||||||||    
T  45454147 atttatttggcaaacggaggaaaaagtgagggactaaaacgtatgttttattaattatgagaccaaaatgaaaa 45454074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 431
Target Start/End: Original strand, 40738845 - 40738928
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgcca-tttttattaattgtgggaccaaaatgaaaataagaaatt 431  Q
    |||||||||| |||| ||  |||| || |||||||||||||||  |||||||||||| |||||||||||| |||| | ||||||    
T  40738845 atttatttggcaaacagagcaaaaagtgagggactaaaacgcctgtttttattaattatgggaccaaaataaaaacatgaaatt 40738928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 394 - 433
Target Start/End: Original strand, 45455424 - 45455463
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaataagaaattaa 433  Q
    ||||||||||||||||||||||||||||||  ||||||||    
T  45455424 ttttattaattgtgggaccaaaatgaaaatttgaaattaa 45455463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 233 - 316
Target Start/End: Original strand, 47456276 - 47456359
Alignment:
Q  233 tcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 316  Q
    ||||| |||| |||||||||||  || | ||||| | |||||||| | |||||| ||||||||| ||||||||| |||||||||    
T  47456276 tctttaaaaaaaaaaatcaaacaattaagattaatacaattaataaggtctatgatggaccacttttaaagttgttccaccata 47456359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 153 - 295
Target Start/End: Complemental strand, 26406425 - 26406283
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 252  Q
    |||||||||||||| ||| ||| | |||||||||| | || ||  ||| |||| || |||| | | | |||||| |||||||||||  || ||| |||||    
T  26406425 agaagatgaagaaatggagaaaaaattaggtgttgattgttcactgtatgatacaacagacatatatgatccaacggttctcttttttaaaaaatatcaa 26406326  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    | |||| ||||||||  |||| |||  ||||||||||||||||    
T  26406325 agggttaaaattaaatgaatttataatatctatggtggaccac 26406283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 394 - 432
Target Start/End: Original strand, 30311521 - 30311559
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||||||||||||||||||||||||||  |||||||    
T  30311521 ttttattaattgtgggaccaaaatgaaaatttgaaatta 30311559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 433
Target Start/End: Original strand, 534084 - 534157
Alignment:
Q  360 aaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaa 433  Q
    ||||| || ||||| | |||||||||  | ||||||||||||| |||| |||||||||||||| | ||||||||    
T  534084 aaacgaaacaaaatttgagggactaattcaccatttttattaaatgtgagaccaaaatgaaaagatgaaattaa 534157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 433
Target Start/End: Complemental strand, 537412 - 537339
Alignment:
Q  360 aaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaa 433  Q
    ||||| || ||||| | |||||||||  | ||||||||||||| |||| |||||||||||||| | ||||||||    
T  537412 aaacgaaacaaaatttgagggactaattcaccatttttattaaatgtgagaccaaaatgaaaagatgaaattaa 537339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 32603042 - 32602969
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| |||||||  |||| || |||||||||||||    ||||||||||| |||||||||||| ||||    
T  32603042 atttatttggcaaacggagtaaaaagtgagggactaaaacgtacgttttattaattatgggaccaaaataaaaa 32602969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 377 - 422
Target Start/End: Original strand, 33779119 - 33779164
Alignment:
Q  377 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||  | |||||||||||||||| ||||||||||||    
T  33779119 agggactaaaacgtgagttttattaattgtggggccaaaatgaaaa 33779164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 47456382 - 47456455
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| |||| ||||||||  | |||||| |||| |    |||||||||||||||||||||||||||||    
T  47456382 atttatttggcaaacagaagaaaaaatgagggaccaaaaagtacgttttattaattgtgggaccaaaatgaaaa 47456455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 10957070 - 10957110
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    |||| ||||||||| |||||||| |||||||||||||||||    
T  10957070 ggttaaaattaaaagaattaataagatctatggtggaccac 10957110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 422
Target Start/End: Complemental strand, 11344571 - 11344543
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||||||||||||||    
T  11344571 ttttattaattgtgggaccaaaatgaaaa 11344543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 377 - 432
Target Start/End: Complemental strand, 24281156 - 24281100
Alignment:
Q  377 agggactaaaacgcca-tttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||||||||||   ||||||||||||||||||||||||| |||| | |||||||    
T  24281156 agggactaaaacgcttgtttttattaattgtgggaccaaaataaaaacatgaaatta 24281100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 391 - 435
Target Start/End: Original strand, 24844399 - 24844443
Alignment:
Q  391 catttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||||||||| ||| ||||||||||| | ||||||||||    
T  24844399 catttttattaattgtaggatcaaaatgaaaacatgaaattaaat 24844443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 422
Target Start/End: Complemental strand, 30333349 - 30333321
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||||||||||||||    
T  30333349 ttttattaattgtgggaccaaaatgaaaa 30333321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 169; Significance: 2e-90; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 152 - 435
Target Start/End: Complemental strand, 30911048 - 30910764
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttag-gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatc 250  Q
    ||||||||||||||||||||||| |   |  |||||||||||||||||||||||||||||||| ||  |||| ||||||||||||||||||  |||| ||    
T  30911048 tagaagatgaagaaaaggaaaaaaagaaaatgtgttggtggtacatcgtaagataaaatagacatgcctaattcaatggttctcttttaaagaaaaactc 30910949  T
Q  251 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 350  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||||||| |||||| |||||  | |  ||    
T  30910948 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccaaagacatcatttggtgttaaagttaacagtcgagat 30910849  T
Q  351 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||||||||| || |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  30910848 ttatttggtaaacagaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 30910764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 152 - 422
Target Start/End: Original strand, 30858982 - 30859252
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaaga-aaaatc 250  Q
    ||||||||||||||||||||||| ||| |||||||||||||| || |||||||||||||||||||| |||||||||||||||||||| ||| | ||||||    
T  30858982 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtatattgtaagataaaatagacttgtctaatccaatggttctctttttaaaaagaaaatc 30859080  T
Q  251 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 350  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||||||||  |    |     
T  30859081 aaacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcatttggggttaaacttaacggtcaagac 30859180  T
Q  351 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||| |||| || |||||||| ||||||| |||||    |||||||||||||||||||||||||||||    
T  30859181 ttatttggcaaacagaggaaaatgtgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 30859252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 152 - 422
Target Start/End: Complemental strand, 22048038 - 22047768
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt--aaaagaaaaat 249  Q
    |||||||||||||||||||||||   |||||||||| |||||||| |||||||||||||||| | | |||| |||||||||||||||  |||| ||||||    
T  22048038 tagaagatgaagaaaaggaaaaaa--ttaggtgttgatggtacattgtaagataaaatagacctttctaattcaatggttctcttttcaaaaaaaaaaat 22047941  T
Q  250 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaa 349  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||||||||||| |||| ||||||||| ||||||||| | ||||||||||||     | |    
T  22047940 caaacggtttaaattaaaataattcataggatttatggtggaccactcttaaggttgatccaccatagacatcatttagagttaaacttaacagccagga 22047841  T
Q  350 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||||| ||||||| |||||  | |||||| ||||||    |||||||||||||||||||||||||||||    
T  22047840 tttatttggcaaacggaggaaaaaatgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaa 22047768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 151 - 422
Target Start/End: Complemental strand, 39604158 - 39603889
Alignment:
Q  151 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttta---aaagaaaa 247  Q
    |||||||||||||||||| |||||   | |||||||||||||||||| || ||||| |||||||||   | |  |||| || ||||||    ||| ||||    
T  39604158 gtagaagatgaagaaaagaaaaaa---tcaggtgttggtggtacatcatatgataagatagacttgctgatt--aatgattatcttttttttaaaaaaaa 39604064  T
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    ||||||| ||| |||||||||||||||||||||||||||||||| |||| |||| ||||||| |||||| ||||||||||||||||||||||||  |       
T  39604063 atcaaacagtttaaattaaaataattaataggatctatggtggatcacttttaaggttggtctaccatagacatcatttggggttaaacttaacagtcat 39603964  T
Q  348 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     |||||||||| ||||||| |||||| | |||||| ||||||    ||||||||||||||||| |||||||||||    
T  39603963 gatttatttggcaaacggaggaaaatttgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaa 39603889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 154 - 316
Target Start/End: Original strand, 36898791 - 36898957
Alignment:
Q  154 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttta----aaagaaaaat 249  Q
    ||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||| || |||||||||||||  |||||||    ||| ||||||    
T  36898791 gaagatgaagaaaagaaaaaaaaattaggtgttggtggtacatcgtaagataaaatagacatgcgtaatccaatggtcatcttttagaagaaaaaaaaat 36898890  T
Q  250 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 316  Q
    |||| |||| ||| |||||||||||| || ||||||||||||| ||| |||| ||||| ||||||||    
T  36898891 caaagggtttaaactaaaataattaacagaatctatggtggactacttttaaggttgggccaccata 36898957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 178 - 432
Target Start/End: Original strand, 22308636 - 22308889
Alignment:
Q  178 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaat 276  Q
    |||||||||| ||||||| ||||||  | ||||||| ||  ||||||||||||  |||||| ||| || | |||||| |||| | ||||||| | |||||    
T  22308636 ttaggtgttgttggtacaccgtaagtaacaatagacatgcataatccaatggtcatctttttaaaaaacagatcaaatggtttacattaaaaaatttaat 22308735  T
Q  277 aggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccat--tggaatttatttggtaaacggaagaaaatg 374  Q
    |   ||||||||||||||||||||| || ||||||||||| ||||   ||||||||||||||||| |   |||| ||||||||| |||||||  ||||||    
T  22308736 aatgtctatggtggaccactcttaaggtaggtccaccatagacat---ttggggttaaacttaacaaccatgga-tttatttggcaaacggagcaaaatg 22308831  T
Q  375 taagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    | |||||||||||||||  ||||||||||| ||||||||||||||||| | |||||||    
T  22308832 tgagggactaaaacgcctgttttattaattatgggaccaaaatgaaaacatgaaatta 22308889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 152 - 341
Target Start/End: Complemental strand, 11262705 - 11262509
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt---------aaaa 242  Q
    ||||||||||||||||||||||| ||| ||||||||||||||  | |||||||||||||||| ||| |||||||||  |||| ||||         ||||    
T  11262705 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtatgtagtaagataaaatagacctgtctaatccaatcattctttttttttttttttaaaa 11262607  T
Q  243 gaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
     ||| |||||| |||| |||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||  ||| |||||||||| || |||||    
T  11262606 aaaagatcaaatggtttaaattataataattaataggatctatggtggaccactcttaaggttggtccaccata-gcatgatttggggttgaagttaac 11262509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 1102877 - 1102736
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||| |||||  ||||||| ||||  || ||||||| ||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  1102877 cgtaagataaaatacacttgcataatccactggtcatcatttaaaaaaaagatcaaacggtttaaattaaaataattaataagatctatggtggaccact 1102778  T
Q  297 cttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||| ||||||| |||||| |   |||||||||||||| |||||    
T  1102777 cttaaggttggtctaccataga---catttggggttaaagttaac 1102736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 153 - 321
Target Start/End: Original strand, 9220270 - 9220441
Alignment:
Q  153 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    ||||||||||||||| ||| ||| | ||||||||||||  ||||||||| | |||||||||| |||||||||||| |||  ||||||||  |||||||||    
T  9220270 agaagatgaagaaaatgaataaaaagttaggtgttggtaatacatcgtatggtaaaatagacatgtgtaatccaacggtcgtcttttaag-gaaaaatca 9220368  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccac---tcttaaagttggtccaccatatacat 321  Q
    ||||||| |||||||||||||||||| ||| ||||| |||||||   |||||| |||||||||||||| ||||    
T  9220369 aacggtttaaattaaaataattaataagatttatgggggaccactcttcttaatgttggtccaccatagacat 9220441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 261 - 435
Target Start/End: Original strand, 30912084 - 30912255
Alignment:
Q  261 aattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggta 360  Q
    |||||| | |||||||| | |||||| || |||||| |||| |||||||||||||| | ||   |||| |||||| |||||  |||| |||||||||| |    
T  30912084 aattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatat---ttggagttaaagttaacacttgggatttatttggca 30912180  T
Q  361 aacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||  |||| || |||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  30912181 aacggagaaaaaggtgagggactaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaat 30912255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 248 - 422
Target Start/End: Original strand, 27705223 - 27705396
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    ||||||||||| |||||||||  |||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||  ||||| |||||  |  |    
T  27705223 atcaaacggtttaaattaaaaatattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttgga-ttaaagttaactgtctg 27705321  T
Q  348 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     |||||||||| ||| ||| |||||| | |||||| ||||||    |||||||||||||  ||||||||||||||    
T  27705322 tatttatttggcaaaaggaggaaaatctgagggaccaaaacgtacgttttattaattgtatgaccaaaatgaaaa 27705396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 248 - 435
Target Start/End: Original strand, 33173867 - 33174053
Alignment:
Q  248 atcaaacggttgaaatt-aaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac--cat 344  Q
    ||||||||||| ||||| |||| |||||||    |||||||| |||||||||||| |||||||||||||| ||||   |||||||||||||||||  |      
T  33173867 atcaaacggttaaaatttaaaaaaattaatgaagtctatggtagaccactcttaaggttggtccaccatagacat---ttggggttaaacttaacagcca 33173963  T
Q  345 tggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
     ||| ||||||||| |||| || ||||| || |||||||||||||||||||||||||| ||||||| ||||||||||| | ||||||||||    
T  33173964 agga-tttatttggcaaacagaggaaaaggtgagggactaaaacgccatttttattaaatgtgggatcaaaatgaaaacatgaaattaaat 33174053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 182 - 301
Target Start/End: Original strand, 4127089 - 4127214
Alignment:
Q  182 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctctttt------aaaagaaaaatcaaacggttgaaattaaaataattaa 275  Q
    |||||||||||||||| ||||||||||||||| |||| |||| ||||||||||||||      |||| |||||||||| |||| |||||||| |||||||    
T  4127089 gtgttggtggtacatcataagataaaatagacctgtgcaatctaatggttctcttttacaaaaaaaataaaaatcaaatggtttaaattaaattaattaa 4127188  T
Q  276 taggatctatggtggaccactcttaa 301  Q
     |||||||||||||||||||| ||||    
T  4127189 caggatctatggtggaccacttttaa 4127214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 219 - 341
Target Start/End: Complemental strand, 15548478 - 15548354
Alignment:
Q  219 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaat----aggatctatggtggaccactcttaaagttggtccacca 314  Q
    ||||||||||||||||||||||||  ||||||||| |||| |||||||||||||||||    ||||| ||||||||| || |||||| ||||||||||||    
T  15548478 taatccaatggttctcttttaaaa--aaaatcaaatggtttaaattaaaataattaattaataggatttatggtggatcattcttaaggttggtccacca 15548381  T
Q  315 tatacatcatttggggttaaacttaac 341  Q
     | ||||||||| ||||||||||||||    
T  15548380 gagacatcatttagggttaaacttaac 15548354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 182 - 305
Target Start/End: Original strand, 13520640 - 13520764
Alignment:
Q  182 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaaaatcaaacggttgaaattaaaataattaatagga 280  Q
    ||||||||| |||||| ||||||||||||||| |  ||||||||| ||||||||||| | || ||||||| ||| ||| |||| ||| ||||||||||||    
T  13520640 gtgttggtgatacatcataagataaaatagaccttcgtaatccaacggttctctttttataaaaaaaatccaacagtttaaatcaaattaattaatagga 13520739  T
Q  281 tctatggtggaccactcttaaagtt 305  Q
    ||||||||| |||||||||||||||    
T  13520740 tctatggtgaaccactcttaaagtt 13520764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 248 - 422
Target Start/End: Complemental strand, 8521461 - 8521291
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||| |   |||||||||||||| |||||| | ||    
T  8521461 atcaaagggttgaaattaaa-taattaataggatctatggtggaccattcttaaggttggtccaccataca---catttggggttaaagttaaccgtcgg 8521366  T
Q  348 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     |||||||||    |||||   ||| || |||||| |||||   | |||||||| || |||||||||||||||||    
T  8521365 gatttatttgactgacggagacaaacgtgagggaccaaaacatgagttttattagttatgggaccaaaatgaaaa 8521291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 357
Target Start/End: Original strand, 1010274 - 1010379
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    |||||| ||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||| |   |||||||||||||| |||||| | ||    
T  1010274 atcaaagggttgaaattaaa-taattaataggatctatggcggaccactcttaaggttggtccaccataca---catttggggttaaagttaaccgtcgg 1010369  T
Q  348 aatttatttg 357  Q
     |||||||||    
T  1010370 gatttatttg 1010379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 10736018 - 10735903
Alignment:
Q  201 agataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactctta 300  Q
    |||||||||| || || |||||| |||||| || |||||||| |  ||||| |||||| |||||||||||||||||| ||||||||||||||  || |||    
T  10736018 agataaaatacacctgcgtaatcaaatggtccttttttaaaaaattaatcagacggtttaaattaaaataattaatatgatctatggtggactgctgtta 10735919  T
Q  301 aagttggtccaccata 316  Q
    | ||||||||||||||    
T  10735918 acgttggtccaccata 10735903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 197 - 422
Target Start/End: Original strand, 325041 - 325265
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttt--taaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||| ||||||||||| | ||||||  || | ||||  | ||| ||| ||||||||||| ||||||| | |||||||| | |||| | |||||||    
T  325041 cgtaagatataatagacttgtatgatccaacagtccactttctttaaaaaaagatcaaacggttaaaattaacaaaattaataaggtctacgatggacca 325140  T
Q  295 ctcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatt 394  Q
    || |||| |||||||||||||| |   ||||| | |||||| |||||  | || |||||||||| ||||||| |||||  | |||||| |||| |    |    
T  325141 ctattaaggttggtccaccataga---catttagagttaaagttaacagtcgggatttatttggcaaacggaggaaaacttgagggaccaaaaggtacgt 325237  T
Q  395 tttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||||||||||||||||||||||||    
T  325238 tttattaattgtgggaccaaaatgaaaa 325265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 241 - 316
Target Start/End: Complemental strand, 1009399 - 1009325
Alignment:
Q  241 aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 316  Q
    |||||| |||||| | |||| |||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  1009399 aagaaagatcaaaggattgagattaaa-taattaataggatctatggtggaccactcttaaggttggtccaccata 1009325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 324251 - 324174
Alignment:
Q  244 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||||||||||||| | |||||   |||||||| | |||||| ||||||||| ||||||||||||||||||| ||||    
T  324251 aaaaatcaaacggttaagattaacgcaattaataaggtctatgatggaccactattaaagttggtccaccatagacat 324174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 39605476 - 39605549
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| |||||| | |||||| ||||||    |||||||||||||||||||||||||||||    
T  39605476 atttatttggcaaacggaggaaaatctgagggaccaaaacgtatgttttattaattgtgggaccaaaatgaaaa 39605549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 203 - 268
Target Start/End: Original strand, 11797395 - 11797461
Alignment:
Q  203 ataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatcaaacggttgaaattaaaa 268  Q
    |||||||| || |||||||||||||||| ||||||||||| ||| |||| ||||||| |||||||||    
T  11797395 ataaaataaacatgtgtaatccaatggtcctcttttaaaaaaaataatctaacggttaaaattaaaa 11797461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 197 - 295
Target Start/End: Complemental strand, 223484 - 223384
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaa--aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||||||||||| || ||||||||| ||||||  |||||  || ||| ||||||||||| ||||||||| | ||||||   |||||||| |||||    
T  223484 cgtaagataaaatagacatgagtaatccaaaggttctactttaaataaaaaagatcaaacggtttaaattaaaaaatttaataaagtctatggtagacca 223385  T
Q  295 c 295  Q
    |    
T  223384 c 223384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 322 - 422
Target Start/End: Original strand, 22049116 - 22049216
Alignment:
Q  322 catttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 421  Q
    ||||||||||||||||||||    || |||||||||  |||| || ||||| || |||||| ||||||    ||||||||||| ||||||||||||||||    
T  22049116 catttggggttaaacttaacagcagggatttatttgccaaacagaggaaaaagtgagggaccaaaacgtacgttttattaattatgggaccaaaatgaaa 22049215  T
Q  422 a 422  Q
    |    
T  22049216 a 22049216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 232 - 295
Target Start/End: Complemental strand, 7426862 - 7426799
Alignment:
Q  232 ctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    ||||||||||  |||||||||| |||||||||| ||| | |||||| | |||||||||||||||    
T  7426862 ctcttttaaagaaaaaatcaaaaggttgaaatttaaaaatttaataaggtctatggtggaccac 7426799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 227 - 285
Target Start/End: Original strand, 17420474 - 17420531
Alignment:
Q  227 tggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctat 285  Q
    ||||||||||| |||| |||||||||||  || ||||||||||||||||||||| ||||    
T  17420474 tggttctctttaaaaa-aaaaatcaaacaatttaaattaaaataattaataggacctat 17420531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 349 - 431
Target Start/End: Complemental strand, 22307617 - 22307535
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatt 431  Q
    |||||||||| |||| ||  |||| || |||||||||||| ||  ||||||||||| ||| ||||||||||||| | ||||||    
T  22307617 atttatttggcaaacagagcaaaaagtgagggactaaaacacctgttttattaattatggaaccaaaatgaaaacatgaaatt 22307535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 22048942 - 22049043
Alignment:
Q  148 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaa 246  Q
    |||| |||||||||||| | ||||||  | |||| || || |||| ||  |||||||||||||||| || ||||||||||| || |||||||| ||||||    
T  22048942 aaggaagaagatgaagagagggaaaataaattagctgatgttggttcactgtaagataaaatagacatgcgtaatccaatgattgtcttttaagaagaaa 22049041  T
Q  247 aa 248  Q
    ||    
T  22049042 aa 22049043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 393 - 433
Target Start/End: Complemental strand, 20538118 - 20538078
Alignment:
Q  393 tttttattaattgtgggaccaaaatgaaaataagaaattaa 433  Q
    |||||||||||| ||||||||||||||||||  ||||||||    
T  20538118 tttttattaattatgggaccaaaatgaaaatttgaaattaa 20538078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 28702769 - 28702729
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    |||| ||||||||| |||||||| |||||||||||||||||    
T  28702769 ggttaaaattaaaagaattaataagatctatggtggaccac 28702729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 422
Target Start/End: Complemental strand, 30857864 - 30857836
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||||||||||||||    
T  30857864 ttttattaattgtgggaccaaaatgaaaa 30857836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 160; Significance: 5e-85; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 160; E-Value: 5e-85
Query Start/End: Original strand, 152 - 435
Target Start/End: Complemental strand, 7707893 - 7707611
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    ||||||||||||||||| ||||| ||  | |||||| ||||||||||||||||||||||||| ||  |||||||||||||||||||||||  ||||||||    
T  7707893 tagaagatgaagaaaagaaaaaaaata-atgtgttgatggtacatcgtaagataaaatagacctgcctaatccaatggttctcttttaaagaaaaaatca 7707795  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||| | ||||||||||| ||||||  ||||| |  | |||    
T  7707794 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaggttggtctaccaaagacatcatttggtgttaaagctaaccgtcaggatt 7707695  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||| |||| || |||||||| | ||||||||||| |||||||||||||||||||||||||||||||| | ||||||||||    
T  7707694 tatttggcaaacagaggaaaatgtgatggactaaaacgtcatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 7707611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 151 - 418
Target Start/End: Original strand, 2312295 - 2312558
Alignment:
Q  151 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatc 250  Q
    |||||||||||||||| | |||||   |||||||||||||||||||| ||||||||||||| | ||| |||||||||||||||||||| ||| |||||||    
T  2312295 gtagaagatgaagaaaggaaaaaa---ttaggtgttggtggtacatcataagataaaataggcctgtctaatccaatggttctctttttaaa-aaaaatc 2312390  T
Q  251 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 350  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||| ||||||||||||||||||||||||  |    ||    
T  2312391 aaacagtttaaattaaaataattaataggatctatggtggaccacttttaagattggtccaccatagacatcatttggggttaaacttaacggtcatgat 2312490  T
Q  351 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatg 418  Q
    |||||||| ||||||| ||||| || ||||||| |||||    |||||||||||||||||| ||||||    
T  2312491 ttatttggcaaacggaggaaaaagtgagggacttaaacgtacgttttattaattgtgggactaaaatg 2312558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 152 - 435
Target Start/End: Complemental strand, 23202150 - 23201869
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaa--aaat 249  Q
    ||||||||||||||||| |||||   |||||||||||||||||||||||||||||||||||| ||  |||| |||||||||||||||         ||||    
T  23202150 tagaagatgaagaaaagaaaaaa---ttaggtgttggtggtacatcgtaagataaaatagacctgcttaattcaatggttctctttttttttttttaaat 23202054  T
Q  250 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaa 349  Q
    |||||||| |||||||||||||||||||||| |||||||| ||||||||||||| || ||||||||| |||||||||    |||||||||||  |||| |    
T  23202053 caaacggtcgaaattaaaataattaataggacctatggtgtaccactcttaaagatgatccaccataaacatcattt-ttattaaacttaacggttggga 23201955  T
Q  350 tttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    ||||||||| ||||||| ||||| || |||||| |||| |||||||||||||| |||||||||||||| |||| | ||||||||||    
T  23201954 tttatttggcaaacggaggaaaaggtgagggaccaaaatgccatttttattaaatgtgggaccaaaataaaaacatgaaattaaat 23201869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 156 - 321
Target Start/End: Complemental strand, 44498762 - 44498596
Alignment:
Q  156 agatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaaaatcaaac 254  Q
    ||||||| |||||||| || ||||||||||||||| |||||| ||||||||||||||| || |||||| ||||||  |||||||| || |||||||||||    
T  44498762 agatgaaaaaaaggaagaaaatttaggtgttggtgatacatcctaagataaaatagacatgcgtaatctaatggtcatcttttaagaaaaaaaatcaaac 44498663  T
Q  255 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||    
T  44498662 ggttttaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacat 44498596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 199 - 422
Target Start/End: Original strand, 6349407 - 6349633
Alignment:
Q  199 taagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataatta---ataggatctatggtggaccac 295  Q
    |||||||||||| ||||| ||||||||| | | ||||||  ||| ||| ||||||| ||| |||||||||||  ||   ||| | |||||||||||||||    
T  6349407 taagataaaatacacttgcgtaatccaacgatcctctttagaaaaaaagatcaaacagtttaaattaaaatatatatatatatggtctatggtggaccac 6349506  T
Q  296 tcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccattt 395  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||  | || || ||||||||||||||||||||| || |||||| |||| |    ||    
T  6349507 tcttaaggttgatccaccatatacatcatttggggttaaacttaacgttcgggatctatttggtaaacggaagaaaaggtgagggaccaaaaggtacgtt 6349606  T
Q  396 ttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||||||||||||    
T  6349607 ttattaattgtgggaccaaaatgaaaa 6349633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 244 - 432
Target Start/End: Complemental strand, 52240090 - 52239903
Alignment:
Q  244 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaacca 343  Q
    ||||||||||||||| |||||||||  ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||||| ||||||     
T  52240090 aaaaatcaaacggtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccaccatagacatcattt-gggttaaagttaaccc 52239992  T
Q  344 ttggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||||||||||| |||||||  ||||  | | | || ||||||    ||||||||||||||||| |||||| |||||  |||||||    
T  52239991 ttggaatttatttggcaaacggagaaaaacctgaagaaccaaaacgtacgttttattaattgtgggatcaaaataaaaatttgaaatta 52239903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 153 - 341
Target Start/End: Complemental strand, 56085650 - 56085465
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 252  Q
    |||||||||||||| | | ||| | ||| |||||| |||| ||  ||||||||||||| || ||||| |||||| |||  || ||| ||| |||||||||    
T  56085650 agaagatgaagaaaggaataaagaattaagtgttgatggttcactgtaagataaaatacacatgtgtgatccaacggtcatccttttaaaaaaaaatcaa 56085551  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |   |||||||||||||| |||||    
T  56085550 acggtttaaattaaaataattaataggatctatggtggaccactcttaaggttagtccaccataga---catttggggttaaagttaac 56085465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 221 - 354
Target Start/End: Original strand, 27850816 - 27850951
Alignment:
Q  221 atccaatggttctcttttaaaagaaaa--atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatata 318  Q
    |||||||| | ||| ||||||| ||||  ||||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |    
T  27850816 atccaatgatcctcctttaaaaaaaaagaatcaaacggtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccataga 27850915  T
Q  319 catcatttggggttaaacttaaccattggaatttat 354  Q
    ||||||||| |||||||||||||  |||| ||||||    
T  27850916 catcatttgaggttaaacttaactgttgggatttat 27850951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 248 - 422
Target Start/End: Complemental strand, 1794621 - 1794447
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    ||||||||||| ||||||||| | |||||| | ||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| || |    
T  1794621 atcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccaccatatacatcatttgggattaaacttaaccgttag 1794522  T
Q  348 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     |||||||||  |||| || ||||| || |||||  |||| |    |||||||||||||| || |||||||||||    
T  1794521 gatttatttgacaaacagaggaaaaagtgagggatcaaaaggtatattttattaattgtgagatcaaaatgaaaa 1794447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 153 - 422
Target Start/End: Complemental strand, 27847979 - 27847714
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 252  Q
    |||||||||||||||||||||| | ||||||| | |||||||||  ||||||||||||||| ||||||||| || ||| ||||||   || ||| |||||    
T  27847979 agaagatgaagaaaaggaaaaaaagttaggtggtagtggtacattataagataaaatagacatgtgtaatctaacggtcctctttcttaaaaaagatcaa 27847880  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccactct-taaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    | |||| ||||| ||| |||||||| | |||||||||||| | ||| |||  |||| ||||||||||   ||||||||||||||||||||| |  | |||    
T  27847879 agggttaaaattgaaa-aattaataaggtctatggtggacta-tctataatcttggcccaccatata---catttggggttaaacttaaccgtctggatt 27847785  T
Q  352 tatttggtaaacggaagaaaatgtaaggga-ctaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||| |||||||||||||  ||||||| | ||||   || |||||||||||||||||||||||| ||||    
T  27847784 tatttggcaaacggaagaaaaattaagggaccgaaaaataca-ttttattaattgtgggaccaaaataaaaa 27847714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 349 - 435
Target Start/End: Original strand, 10168790 - 10168876
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  10168790 atttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 10168876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 178 - 435
Target Start/End: Complemental strand, 13165774 - 13165519
Alignment:
Q  178 ttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaat 276  Q
    ||||||| | ||||||||  ||||||||||||| |  || |||||||||||  | | ||||||||| ||| ||||||||||| |||||||||||||||||    
T  13165774 ttaggtggtagtggtacacagtaagataaaatacatctgcgtaatccaatgactattcttttaaaaaaaagatcaaacggtttaaattaaaataattaat 13165675  T
Q  277 aggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccat-tggaatttatttggtaaacggaagaaaatgt 375  Q
        ||||||||||||||||||||| |||||||||||||| |    |||||  ||||||||||||  |   | |||||||||  ||||||| |||||  |    
T  13165674 gaagtctatggtggaccactcttaaggttggtccaccataga---aatttgaagttaaacttaacagtcaaggatttatttgacaaacggaggaaaagat 13165578  T
Q  376 aagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
     | |||| |||||||||||||||||||||  |||||||||||||||| | ||||||||||    
T  13165577 gaaggacgaaaacgccatttttattaatt-agggaccaaaatgaaaacatgaaattaaat 13165519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 153 - 341
Target Start/End: Original strand, 26496122 - 26496308
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaa 252  Q
    |||||||||||||| ||| ||| | ||| |||||| ||   || |||||||||||||| |  ||||||||||||||   ||| ||| ||| ||| |||||    
T  26496122 agaagatgaagaaagggagaaataattaagtgttgttgactcaccgtaagataaaatacatctgtgtaatccaatgaccctcattttaaaaaaatatcaa 26496221  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    |||||| |||||| |||||||||||||||||||||||||||| | ||||||| ||||||||||| ||||  || ||||||||| |||||    
T  26496222 acggtttaaattagaataattaataggatctatggtggaccatttttaaagtcggtccaccatagacat--ttgggggttaaagttaac 26496308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 194 - 315
Target Start/End: Complemental strand, 34326989 - 34326868
Alignment:
Q  194 catcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacc 293  Q
    ||||||||||||||||| ||||| ||||| ||||||| ||| || |||| ||||  |||||| || ||||| |||||||||||||||||||| || ||||    
T  34326989 catcgtaagataaaatacacttgcgtaattcaatggtcctcgttaaaaaaaaaatacaaacgattaaaatttaaataattaataggatctatagtagacc 34326890  T
Q  294 actcttaaagttggtccaccat 315  Q
    ||||||||||||||||||||||    
T  34326889 actcttaaagttggtccaccat 34326868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 197 - 309
Target Start/End: Complemental strand, 36845669 - 36845557
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||| || || |||||||||||||  |||||||||| ||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  36845669 cgtaagataaaatacacctgcgtaatccaatggtcatcttttaaaaaaaatatcaaacagtttacattaaaataattaataggacctatggtggaccact 36845570  T
Q  297 cttaaagttggtc 309  Q
    ||||| |||||||    
T  36845569 cttaatgttggtc 36845557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 250 - 389
Target Start/End: Original strand, 15449984 - 15450122
Alignment:
Q  250 caaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaa 349  Q
    ||||| ||| |||||||||  ||||||||||||||||||||||||||||||| |||||||||| ||| ||| ||||||| ||||||||||||| |  | |    
T  15449984 caaacagtttaaattaaaaatattaataggatctatggtggaccactcttaaggttggtccacgatagacaacatttggagttaaacttaaccgtaag-a 15450082  T
Q  350 tttatttggtaaacggaagaaaatgtaagggactaaaacg 389  Q
    ||||||||| ||||||| ||||| ||||| |||| |||||    
T  15450083 tttatttggcaaacggaggaaaaggtaagcgacttaaacg 15450122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 248 - 435
Target Start/End: Complemental strand, 33231597 - 33231412
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattg- 346  Q
    |||||| |||||||||||||| |||||||||  | ||||||||||||||  ||| ||| |||||||||| ||||  ||  |||||||||||||| | |      
T  33231597 atcaaatggttgaaattaaaa-aattaatagagtttatggtggaccacttctaaggtttgtccaccatagacat--ttgagggttaaacttaacaagtat 33231501  T
Q  347 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||||| ||||||   ||||  | |||||||||||| |||||||||||||||||||||| |||||||||| | ||||||||||    
T  33231500 gaatttatttggcaaacggtgaaaaagatgagggactaaaacaccatttttattaattgtgggactaaaatgaaaacatgaaattaaat 33231412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 349 - 430
Target Start/End: Original strand, 33232704 - 33232785
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaat 430  Q
    |||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |||||    
T  33232704 atttatttggcaaacggaggaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaataaaaatatgaaat 33232785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 153 - 341
Target Start/End: Complemental strand, 1520114 - 1519929
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 251  Q
    |||||||||||||| ||| | | | |||||||||| || | || |||||||||||||| ||||  |||||| ||||||  || ||||||||  | |||||    
T  1520114 agaagatgaagaaagggagacataattaggtgttgttgattcaccgtaagataaaatacacttacgtaatctaatggtcatccttttaaaaatataatca 1520015  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||| |||||||||||||||||||||||||||||||| |||| |||||| || || ||||||   | |||||||||||||| |||||    
T  1520014 aacggtttaaattaaaataattaataggatctatggtggatcact-ttaaaggtgatctaccata---aacatttggggttaaagttaac 1519929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 197 - 341
Target Start/End: Complemental strand, 40723484 - 40723345
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||| ||  | ||||||||||||| ||| |  |||| ||| |||||||| || | ||| ||||||||||||||||||||||| |||||||    
T  40723484 cgtaagataaaatacaccagcgtaatccaatggtcctcgt--aaaaaaaagatcaaacgattaacatttaaataattaataggatctatggtagaccact 40723387  T
Q  297 cttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||| ||||||||||||||||   |||||| |||||||||||||    
T  40723386 cttaaggttggtccaccatata---catttgaggttaaacttaac 40723345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 197 - 316
Target Start/End: Original strand, 52138648 - 52138769
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctctttt--aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    |||||||||||||| || || ||||||||||    ||| |||  |||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  52138648 cgtaagataaaatacacatgcgtaatccaataaccctccttttaaaaaaaaaaatcaaacggtttaaattagaataattaataggatctatggtggacca 52138747  T
Q  295 ctcttaaagttggtccaccata 316  Q
     |||||||||||||| ||||||    
T  52138748 ttcttaaagttggtctaccata 52138769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 349 - 435
Target Start/End: Original strand, 54866638 - 54866723
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| ||||||| ||||| ||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||    
T  54866638 atttatttggcaaacggaggaaaacgtaagggactaaaacaccatttttattaattgt-ggaccaaaatgaaaatatgaaattaaat 54866723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 248 - 422
Target Start/End: Complemental strand, 6348362 - 6348191
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    |||||| |||| |||||| ||  ||||||| | |||| |||||||||||||||| |||||||||||||| |   |||||| ||||||||||||||||  |    
T  6348362 atcaaagggttaaaattagaaatattaataaggtctacggtggaccactcttaaggttggtccaccataga---catttgaggttaaacttaaccatcag 6348266  T
Q  348 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||||||  |||| || ||||| || ||| || |||| |    |||||||||||||||||||||||||||||    
T  6348265 aatttatttgacaaacagaggaaaaagtgaggaaccaaaaggtacgttttattaattgtgggaccaaaatgaaaa 6348191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 197 - 342
Target Start/End: Complemental strand, 26630049 - 26629908
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||| || |  |||||| ||||||  || ||||||| ||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  26630049 cgtaagataaaatacacctacgtaatctaatggtcatcctttaaaaaaaagatcaaacagtttacattaaaataattaataggacctatggtggaccact 26629950  T
Q  297 cttaaagttggtccaccatatacatcatttggggttaaacttaacc 342  Q
    ||| |||||||| |||||||   | |||||||||||||| ||||||    
T  26629949 ctt-aagttggttcaccata---aacatttggggttaaagttaacc 26629908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 252 - 422
Target Start/End: Original strand, 42810115 - 42810283
Alignment:
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||| ||||||||| | |||||| | |||||||||||| ||||||||  ||||| ||||||| |||||  | |||||||||||||||     | |||    
T  42810115 aacggtttaaattaaaaaatttaataaggtctatggtggactactcttaagattggttcaccatagacatc--tgggggttaaacttaacaccaaggatt 42810212  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||| ||||||| |||||||| ||||||| ||| |    |||||||||||||||||||||||||||||    
T  42810213 tatttggcaaacggaggaaaatgtgagggacttaaaagtacgttttattaattgtgggaccaaaatgaaaa 42810283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 198 - 316
Target Start/End: Original strand, 49896441 - 49896560
Alignment:
Q  198 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||| ||||||| ||  | ||| |||||||||||||||| | |||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  49896441 gtaagatacaatagacatgcatgatctaatggttctcttttaataaaaaatatcaaacggtttaaattaaaataattaacaggatctacagtggaccact 49896540  T
Q  297 cttaaagttggtccaccata 316  Q
    ||| | ||||||||||||||    
T  49896541 ctttaggttggtccaccata 49896560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 248 - 435
Target Start/End: Complemental strand, 50547114 - 50546929
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccatt-g 346  Q
    |||||| |||||||||||||| |||||||||  | ||||||||||||||  ||| |||  ||| ||||| ||||  ||  ||||||||||||||   | |    
T  50547114 atcaaatggttgaaattaaaa-aattaatagagtttatggtggaccacttctaaggtttatccgccatagacat--ttgagggttaaacttaacaggtag 50547018  T
Q  347 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    | |||||||||| ||||||  |||||  | ||||||||||||||||||||||||||||||||||| |||||||| | | ||||||||||    
T  50547017 ggatttatttggcaaacggtggaaaagatgagggactaaaacgccatttttattaattgtgggactaaaatgaagacatgaaattaaat 50546929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 298 - 422
Target Start/End: Original strand, 1588045 - 1588169
Alignment:
Q  298 ttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccattttt 397  Q
    |||| ||||||| |||||| ||||||||||||||||||||||||  |   ||||||||||||||||||| ||||| || ||||| | |||||    ||||    
T  1588045 ttaaggttggtctaccatagacatcatttggggttaaacttaacagtcataatttatttggtaaacggaggaaaaagtgagggatttaaacgtacatttt 1588144  T
Q  398 attaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||| ||||||||||    
T  1588145 attaattgtgggactaaaatgaaaa 1588169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 281 - 435
Target Start/End: Complemental strand, 4714195 - 4714042
Alignment:
Q  281 tctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgga--atttatttggtaaac-ggaagaaaatgtaa 377  Q
    ||||||||||||||||||||| |||| ||||||||| ||||   |||  |||||||||||  | | ||  |||||||||| |||  ||| || || ||||    
T  4714195 tctatggtggaccactcttaaggttgatccaccatagacat---ttgaagttaaacttaat-agtcgatgatttatttggcaaaaaggaggataaggtaa 4714100  T
Q  378 gggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||| ||||||||||||||||||||||||||||||||||| |||||| ||||||||||    
T  4714099 gggattaaaacgccatttttattaattgtgggaccaaaataaaaatatgaaattaaat 4714042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 197 - 422
Target Start/End: Complemental strand, 1830009 - 1829789
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    ||||||||||||||||| |  |||||| |||||| ||| |||||||   |||||||| |||| | ||||| | |||||||| | |||| | |||||||||    
T  1830009 cgtaagataaaatagacctacgtaatctaatggtcctcctttaaaa---aaatcaaatggttaagattaataaaattaataaggtctacgatggaccact 1829913  T
Q  297 cttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttt 396  Q
     ||||||||||||||| ||| ||||  || | | | ||| |||||  | ||||||||||||  ||||| | ||||| || |||||||||||      |||    
T  1829912 tttaaagttggtccacgatagacat--ttagagttaaaagttaacagtcggaatttatttgacaaacgtaggaaaaagtgagggactaaaagatacgttt 1829815  T
Q  397 tattaattgtgggaccaaaatgaaaa 422  Q
    ||||||||||||||||||||||||||    
T  1829814 tattaattgtgggaccaaaatgaaaa 1829789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 182 - 321
Target Start/End: Original strand, 19750135 - 19750275
Alignment:
Q  182 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaatagga 280  Q
    |||||| |||| |||||||||||| |||| || || || ||||||   | || ||||||||| ||| |||||||| || |||||||||||||||||||||    
T  19750135 gtgttgatggttcatcgtaagatagaatacacctgcgtgatccaacaatcctccttttaaaaaaaagatcaaacgatttaaattaaaataattaatagga 19750234  T
Q  281 tctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||||||||||| ||| ||||  || |||||||||| ||||    
T  19750235 tctatggtggacaacttttaagatttgtccaccatagacat 19750275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 182 - 321
Target Start/End: Complemental strand, 19789671 - 19789531
Alignment:
Q  182 gtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaatagga 280  Q
    |||||| |||| |||||||||||| |||| || || || ||||||   | || ||||||||| ||| |||||||| || |||||||||||||||||||||    
T  19789671 gtgttgatggttcatcgtaagatagaatacacctgcgtgatccaacaatcctccttttaaaaaaaagatcaaacgatttaaattaaaataattaatagga 19789572  T
Q  281 tctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||||||||||| ||| ||||  || |||||||||| ||||    
T  19789571 tctatggtggacaacttttaagatttgtccaccatagacat 19789531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 261 - 422
Target Start/End: Original strand, 7708710 - 7708868
Alignment:
Q  261 aattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggta 360  Q
    |||||| | |||||||| | |||||| || |||||| |||| |||||||||||||| | ||   || | |||||| |||||  |||| |||||||||| |    
T  7708710 aattaacaaaattaataaggtctatgatgtaccacttttaaggttggtccaccatagatat---ttagagttaaagttaacacttgggatttatttggca 7708806  T
Q  361 aacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||| ||  |||| || |||||||||||||||| ||||||||||||| | |||||||||||||    
T  7708807 aacagagaaaaaggtgagggactaaaacgccacttttattaattgtagaaccaaaatgaaaa 7708868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 255 - 422
Target Start/End: Complemental strand, 11968713 - 11968547
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 354  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||| |||| || | | |||||| || ||    |||||||||    
T  11968713 ggtttaaattaaaataattaataggatctatgatggaccactcttaaggttggtccatcatagacataatct-gagttaaagttgacagccggaatttat 11968615  T
Q  355 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||   |||||||  ||||| | |||||| |||| |    |||||||||||||| ||||||||||||||    
T  11968614 tttacaaacggagcaaaatctgagggaccaaaaagtatgttttattaattgtgagaccaaaatgaaaa 11968547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 255 - 321
Target Start/End: Complemental strand, 4871695 - 4871629
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||| ||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||||    
T  4871695 ggtttaaattaaaataattaataggatctacggtggaccactctttaggttggtccaccatagacat 4871629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 10167534 - 10167448
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||  ||||||| |||||| | ||||||||||| || ||||||||||||||||| ||||||||||||| | ||||||||||    
T  10167534 atttatttgacaaacggaggaaaatatgagggactaaaatgcaatttttattaattgtggtaccaaaatgaaaacatgaaattaaat 10167448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 232 - 341
Target Start/End: Original strand, 28590795 - 28590904
Alignment:
Q  232 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttgggg 330  Q
    ||||||||| | |||| ||||||| ||| | ||||||||||||||||||||||||| || | |||||||||||||||| ||||||||| | ||||| |||    
T  28590795 ctcttttaataaaaaagatcaaacagtttatattaaaataattaataggatctatgatgaatcactcttaaagttggttcaccatataga-catttaggg 28590893  T
Q  331 ttaaacttaac 341  Q
    ||||| |||||    
T  28590894 ttaaatttaac 28590904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 198 - 294
Target Start/End: Original strand, 23103866 - 23103962
Alignment:
Q  198 gtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||||||||||  | |||||||||| ||| || |||||||  ||| ||||||||||| ||||||||| |||||||||||||||||||||||||    
T  23103866 gtaagataaaatagacacgcgtaatccaatagttatccttttaaatcaaagatcaaacggtttaaattaaaa-aattaataggatctatggtggacca 23103962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 161 - 423
Target Start/End: Original strand, 37884098 - 37884358
Alignment:
Q  161 aagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttt-taaaagaaaaatcaaacggttg 259  Q
    |||||||||||||| | ||||||| | |||||| || |||||||||| ||||| |||| |||||||  || |||||| | ||| ||| |||||| ||||     
T  37884098 aagaaaaggaaaaaaaattaggtggtagtggtatatggtaagataaattagacatgtgcaatccaaccgtcctctttcttaaaaaaagatcaaagggtta 37884197  T
Q  260 aaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggt 359  Q
    |||||  || | |||||| | |||||||||||| |    |||  ||||| |||||||||    |||||||||||||||||||  |  | ||||||||||     
T  37884198 aaattggaaaatttaataaggtctatggtggactatatataatattggttcaccatata---tatttggggttaaacttaacagtctggatttatttggc 37884294  T
Q  360 aaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaat 423  Q
    ||||||| ||||| |||| |||| |||| |    ||||||||||| |||||| |||||||||||    
T  37884295 aaacggaggaaaaagtaaaggaccaaaaggtacattttattaattatgggacaaaaatgaaaat 37884358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 197 - 295
Target Start/End: Original strand, 38555134 - 38555234
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaa--aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||||||||||| |||||||||||||||||||| |||||  || ||| ||||||||||| ||||||||| | ||||||   |||||||| |||||    
T  38555134 cgtaagataaaatagacatgtgtaatccaatggttctcctttaaataaaaaagatcaaacggtttaaattaaaaaatttaataaagtctatggtagacca 38555233  T
Q  295 c 295  Q
    |    
T  38555234 c 38555234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 50548230 - 50548303
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| |||| || |||||||| |||||||||||||  ||| |||||||||||||||||||||||||||    
T  50548230 atttatttggcaaacagaggaaaatgtgagggactaaaacgttattcttattaattgtgggaccaaaatgaaaa 50548303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 379 - 435
Target Start/End: Original strand, 23203990 - 23204046
Alignment:
Q  379 ggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||| ||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  23203990 ggaccaaaacgccatttttattaaatgtgggaccaaaatgaaaatatgaaattaaat 23204046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 53205490 - 53205573
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||| ||||||| ||||| || |||||||||||||||  |||| ||||||||||||| |||||||||||  |||||||    
T  53205490 atttatttggcaaacggaggaaaaagtgagggactaaaacgcctatttttttaattgtgggacgaaaatgaaaatctgaaatta 53205573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 237 - 342
Target Start/End: Complemental strand, 53432281 - 53432179
Alignment:
Q  237 ttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaac 336  Q
    |||||| ||| ||||||||||| ||||| ||| |||||||| | | |||||||  ||||||||||||||||| ||||||| |   |||||||||||||||    
T  53432281 ttaaaaaaaagatcaaacggttaaaattgaaaaaattaataaggtgtatggtgagccactcttaaagttggttcaccataga---catttggggttaaac 53432185  T
Q  337 ttaacc 342  Q
    ||||||    
T  53432184 ttaacc 53432179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 153 - 305
Target Start/End: Original strand, 41349339 - 41349493
Alignment:
Q  153 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aatc 250  Q
    ||||||||||||||| | | ||| | |||||||||| | || || | | ||||| ||||||| ||  ||||| |||||| ||||||||||| ||| ||||    
T  41349339 agaagatgaagaaaatgtacaaaaaattaggtgttgatagtgcaccattagatagaatagacctgcataatcaaatggtcctcttttaaaaaaaataatc 41349438  T
Q  251 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagtt 305  Q
    |||||||| |||| ||||| ||||||| ||||||| ||||||  |||||||||||    
T  41349439 aaacggtttaaataaaaatgattaatatgatctatagtggacatctcttaaagtt 41349493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 232 - 312
Target Start/End: Complemental strand, 7053402 - 7053321
Alignment:
Q  232 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 312  Q
    ||||||||| | |||| |||||||| || ||||||||| |||||||||||||||||||||| |||||||||  |||||||||    
T  7053402 ctcttttaataaaaaagatcaaacgatttaaattaaaaaaattaataggatctatggtggatcactcttaagattggtccac 7053321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 198 - 294
Target Start/End: Complemental strand, 45535303 - 45535207
Alignment:
Q  198 gtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||||||||||  | |||||||||| ||| || ||| ||| |||| ||||||| ||| ||||||||| |||||||||||||||||||||||||    
T  45535303 gtaagataaaatagacacgcgtaatccaatagttatccttttaaataaaagatcaaacagtttaaattaaaa-aattaataggatctatggtggacca 45535207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 54865213 - 54865128
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||  ||||||| |||||||| |||||||||||| | ||||| ||||||| ||||||||||||||||| |  |||||||||    
T  54865213 atttatttgacaaacggaggaaaatgtgagggactaaaacacaatttt-attaattatgggaccaaaatgaaaacataaaattaaat 54865128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 349 - 433
Target Start/End: Complemental strand, 42871204 - 42871120
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaa 433  Q
    |||||||||| ||||||| ||||| || |||||| ||||||    ||||||||||||||||| ||||||||||||  ||||||||    
T  42871204 atttatttggcaaacggaggaaaaagtgagggaccaaaacgtacgttttattaattgtgggatcaaaatgaaaatttgaaattaa 42871120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 229 - 312
Target Start/End: Original strand, 56157384 - 56157468
Alignment:
Q  229 gttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 312  Q
    |||| ||||||||| |||| ||||||  ||| || |||||| |||||||||||||||||||||| |||||||||  |||||||||    
T  56157384 gttcccttttaaaataaaagatcaaatagttaaagttaaaaaaattaataggatctatggtggaacactcttaagattggtccac 56157468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 340
Target Start/End: Original strand, 8682756 - 8682845
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaa-agttggtccaccatatacatcatttggggttaaacttaa 340  Q
    |||||| |||||||||||||| |||||||| |||||||| |||||||||||||| | || |||||||||| |   ||||||| |||||||||||    
T  8682756 atcaaagggttgaaattaaaa-aattaatatgatctatgatggaccactcttaagatttagtccaccataga---catttggtgttaaacttaa 8682845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 2311032 - 2310959
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| || |||| |||||| | |||||| ||||||    |||||||||||||||||||||||||||||    
T  2311032 atttatttggcaatcggaggaaaatctgagggaccaaaacgtacgttttattaattgtgggaccaaaatgaaaa 2310959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 4129102 - 4129029
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| |||||||  |||| ||||||||| |||| |    |||||||||||||||||||||||||||||    
T  4129102 atttatttggcaaacggagaaaaaagtaagggaccaaaatgtacattttattaattgtgggaccaaaatgaaaa 4129029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 148 - 258
Target Start/End: Complemental strand, 392633 - 392522
Alignment:
Q  148 aaggtagaagatgaagaa-aag-gaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaa 245  Q
    |||||||||||||||||| ||| |||||| | ||||||||||| || |    |||||||||||||||| | | ||||||| ||||| |||||||||| ||    
T  392633 aaggtagaagatgaagaagaagagaaaaaaaattaggtgttggaggcattcggtaagataaaatagacctctctaatccattggttatcttttaaaa-aa 392535  T
Q  246 aaatcaaacggtt 258  Q
    |||| ||||||||    
T  392534 aaatgaaacggtt 392522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 423
Target Start/End: Complemental strand, 1587390 - 1587217
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    ||||||||||| | ||||| | |||||||| | | || | |||| |||| |||||||||||| || ||| ||||  || | | | ||| |||||||| ||    
T  1587390 atcaaacggttaagattaacaaaattaataaggtatacgatggaacacttttaaagttggtctactatagacat--ttagagttaaaagttaaccatcgg 1587293  T
Q  348 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaat 423  Q
     |||||||||| ||||||| ||||| || |||||| |||| |    |||||||||||||| ||| |||||||||||    
T  1587292 gatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgagactaaaatgaaaat 1587217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 229 - 312
Target Start/End: Complemental strand, 36243747 - 36243663
Alignment:
Q  229 gttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccac 312  Q
    |||| ||||||||| |||| ||||||||||| || |||||| | | ||||| |||||||||||| |||||||||  |||||||||    
T  36243747 gttcccttttaaaataaaagatcaaacggttaaagttaaaaaattcaatagaatctatggtggaacactcttaagattggtccac 36243663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 432
Target Start/End: Original strand, 393689 - 393728
Alignment:
Q  393 tttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||||||||||||||||||||||||  |||||||    
T  393689 tttttattaattgtgggaccaaaatgaaaatttgaaatta 393728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 351 - 422
Target Start/End: Original strand, 42872308 - 42872379
Alignment:
Q  351 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||| ||||||| ||||| || |||||| ||||||    ||||||||||| |||||||||||||||||    
T  42872308 ttatttggcaaacggaggaaaaagtgagggaccaaaacgtacattttattaattatgggaccaaaatgaaaa 42872379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 1188952 - 1188879
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| ||||| || |||||| |||| |    |||||||||||||||||||||||| ||||    
T  1188952 atttatttggcaaacggaggaaaaagtgagggaccaaaatgtacgttttattaattgtgggaccaaaataaaaa 1188879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 37882943 - 37882870
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| ||||| || |||||| |||| |    |||||||||||||||||| ||||||||||    
T  37882943 atttatttggcaaacggaggaaaaggtgagggaccaaaaggtacgttttattaattgtgggactaaaatgaaaa 37882870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 40724729 - 40724786
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaata 210  Q
    |||||||||||||||||||| | | |||  |||||||||||||||| |||||| ||||    
T  40724729 agaagatgaagaaaaggaaacaaagttatatgttggtggtacatcgcaagatataata 40724786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 40792860 - 40792787
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| |||||||  ||||| | |||||| |||| |    |||||||||||||||||||||||||||||    
T  40792860 atttatttggcaaacggagaaaaatctgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaa 40792787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 417
Target Start/End: Original strand, 49344016 - 49344085
Alignment:
Q  349 atttatttggtaaacggaagaaaatgt-aagggactaaaacgccatttttattaattgtgggaccaaaat 417  Q
    |||||||||| ||||||| ||||| || |||||||| |||| |   ||||||||||||||||||||||||    
T  49344016 atttatttggcaaacggaggaaaaagtgaagggacttaaacccacgttttattaattgtgggaccaaaat 49344085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 53204470 - 53204397
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| |||||||  ||||  | ||| |||||||||||  |||||||||||||| || |||||||||||    
T  53204470 atttatttggcaaacggagaaaaaattgaggaactaaaacgcctgttttattaattgtgagatcaaaatgaaaa 53204397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 53435661 - 53435734
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||||||||| ||||| ||| |||||||    |||| |||||||||||||||| ||||||| |||||| ||||    
T  53435661 atcaaacggttaaaatttaaaaaattaatgaagtctacggtggaccactcttaaggttggtctaccatagacat 53435734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 422
Target Start/End: Complemental strand, 390281 - 390253
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||||||||||||||    
T  390281 ttttattaattgtgggaccaaaatgaaaa 390253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 394 - 422
Target Start/End: Original strand, 27850984 - 27851012
Alignment:
Q  394 ttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||||||||||||||||    
T  27850984 ttttattaattgtgggaccaaaatgaaaa 27851012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 35350024 - 35350064
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    |||| ||||||||| |||||||| |||||||||||||||||    
T  35350024 ggttaaaattaaaagaattaataagatctatggtggaccac 35350064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 235 - 295
Target Start/End: Complemental strand, 38370501 - 38370441
Alignment:
Q  235 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    |||||||| ||| |||||| |||| ||||||||  |||| ||| |||||||||||||||||    
T  38370501 ttttaaaaaaaatatcaaagggttaaaattaaatgaatttataagatctatggtggaccac 38370441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 255 - 295
Target Start/End: Original strand, 39057683 - 39057723
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    |||| ||||||||| |||||||| |||||||||||||||||    
T  39057683 ggttaaaattaaaagaattaataagatctatggtggaccac 39057723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 143; Significance: 8e-75; HSPs: 63)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 143; E-Value: 8e-75
Query Start/End: Original strand, 152 - 422
Target Start/End: Original strand, 32695087 - 32695355
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    ||||||||||||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||    
T  32695087 tagaagatgaagaaaaggaaaaaaatt-aggtgttggtggtatatcgtaagataaaatagacttgtctaatccaatggttctcttttaaaa-aaaaatca 32695184  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||| ||||||||||||||||||||||||||||||||||| ||||||  ||||| ||||||| ||||||||||||||||||||||||  |  | | |    
T  32695185 aacggtttaaattaaaataattaataggatctatggtggaccaatcttaagattggttcaccatagacatcatttggggttaaacttaacggtcaggact 32695284  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     |||||| |||| || ||||| || | ||||| |||||    |||||||||||||| ||||||||||||||    
T  32695285 aatttggcaaacagaggaaaacgtgaaggacttaaacgtacgttttattaattgtgagaccaaaatgaaaa 32695355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 219 - 435
Target Start/End: Original strand, 13117511 - 13117726
Alignment:
Q  219 taatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatata 318  Q
    |||||||||||||||||||||||| ||| ||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||    
T  13117511 taatccaatggttctcttttaaaaaaaacatcaaacggttgatattaaaataattaataggatctatgatggaccacttttaaagttggtccactatata 13117610  T
Q  319 catcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatg 418  Q
     ||||||| ||||||||||| |   | || |||||||||| |||| || |||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  13117611 gatcattt-gggttaaacttgatggtcgggatttatttggcaaacagaggaaaatgtgagggactaaaacgccatttttattaattatgggaccaaaatg 13117709  T
Q  419 aaaataagaaattaaat 435  Q
    |||| | ||||||||||    
T  13117710 aaaacatgaaattaaat 13117726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 156 - 321
Target Start/End: Original strand, 24192478 - 24192644
Alignment:
Q  156 agatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaa-aagaaaaatcaaac 254  Q
    ||||||||||||| ||||| | ||||||||||||| |||||| ||| ||||||||||| || |||||| |||||||||||||||| || |||||||||||    
T  24192478 agatgaagaaaagtaaaaaaaattaggtgttggtgatacatcctaaaataaaatagacatgcgtaatctaatggttctcttttaagaaaaaaaatcaaac 24192577  T
Q  255 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||  ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||    
T  24192578 ggttttaattaaaataattaataggatctatggtggaccactcttaaggttggtccaccatagacat 24192644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 244 - 435
Target Start/End: Complemental strand, 42098776 - 42098586
Alignment:
Q  244 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaacca 343  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| |||||||||||| | |||||||||||||||||| |||| ||    
T  42098776 aaaaatcaaacggttgaaattaaagtaattaataggatctatggtggaccacttttaaggttggtccaccaaagacatcatttggggttaaaattaa-ca 42098678  T
Q  344 ttggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
     | | |||||||||| |||||||   ||| ||  ||||  ||||||||| ||||||||||||||||||||||||||||| | ||||||||||    
T  42098677 gtcggatttatttggcaaacggagacaaacgtgggggatcaaaacgccacttttattaattgtgggaccaaaatgaaaacatgaaattaaat 42098586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 154 - 422
Target Start/End: Original strand, 32798344 - 32798612
Alignment:
Q  154 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaa 252  Q
    |||||||||||||| |||||| | ||| ||| || |||| || |||||||||||||| || |  | ||||||  ||| ||| ||| |||||||| |||||    
T  32798344 gaagatgaagaaaaagaaaaaaagttaagtggtgatggttcaacgtaagataaaatacacctacgcaatccagcggtcctccttttaaagaaaagatcaa 32798443  T
Q  253 acggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaattt 352  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||||| | ||||||||||||| |  | ||||    
T  32798444 acggtttaaattaaaataattaataggatctatggtggaccactcttaaggttgatccaccatagacatcattt-gagttaaacttaaccgtgaggattt 32798542  T
Q  353 atttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||  |||||||  ||||  | ||||||||||| |    |||||||||||||||||||||||||||||    
T  32798543 atttgacaaacggagaaaaaattgagggactaaaaggtacgttttattaattgtgggaccaaaatgaaaa 32798612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 192 - 321
Target Start/End: Original strand, 20180525 - 20180655
Alignment:
Q  192 tacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtgg 290  Q
    |||||| ||||||||||||||| ||||||||| |||||| ||||||||| | |||| |||||||||||  ||||||||||||||||||||||||||||||    
T  20180525 tacatcctaagataaaatagacatgtgtaatctaatggtcctcttttaagaaaaaagatcaaacggttttaattaaaataattaataggatctatggtgg 20180624  T
Q  291 accactcttaaagttggtccaccatatacat 321  Q
    ||||||||||| ||| |||||| ||| ||||    
T  20180625 accactcttaatgttagtccactatagacat 20180655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 153 - 422
Target Start/End: Complemental strand, 42871119 - 42870849
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatca 251  Q
    |||||||||||||| ||| ||| | |||||||||| ||   |   ||||||||||||| || || ||||| |||||||  || |||||||| | | ||||    
T  42871119 agaagatgaagaaagggagaaataattaggtgttgttgactcgcggtaagataaaatacacatgcgtaattcaatggtcatccttttaaaacacagatca 42871020  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||| |||||| || | |||||| | |||| ||||||||||||||||  ||||||||| ||| ||||| ||||||||||||||||||  |  | |||    
T  42871019 aacggtttaaattacaaaatttaataaggtctacggtggaccactcttaagattggtccacaatagacatcttttggggttaaacttaacagtcaggatt 42870920  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     ||| || |||| || ||||| ||||||||||||||||    |||||||||||||||||||||||||||||    
T  42870919 cattcggcaaacagacgaaaaagtaagggactaaaacgtacgttttattaattgtgggaccaaaatgaaaa 42870849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 181 - 301
Target Start/End: Complemental strand, 17455322 - 17455202
Alignment:
Q  181 ggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaatagga 280  Q
    |||||| |||||||||||||||||||||||||| || |||||| |||||| ||||||||||| | | || |||||||| |||||||||||||||||| ||    
T  17455322 ggtgttagtggtacatcgtaagataaaatagacctgcgtaatctaatggtcctcttttaaaaaatagataaaacggttcaaattaaaataattaataaga 17455223  T
Q  281 tctatggtggaccactcttaa 301  Q
    |||||||||||||||| ||||    
T  17455222 tctatggtggaccacttttaa 17455202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 30404013 - 30403897
Alignment:
Q  446 ttttagaaaatagttatgtgcacctggaatacttgtaaagaacaagatattgattataacgtacaaattgtagagtttttgtctaactcgtaatatattt 545  Q
    ||||| ||||||||||| ||||||| |||| |||||||||||||| | ||||||||||||  |||||||||||||| |||||||||||| ||||||||||    
T  30404013 ttttataaaatagttatatgcacctagaattcttgtaaagaacaaaacattgattataac--acaaattgtagagtgtttgtctaactcataatatattt 30403916  T
Q  546 aaacgtctgttagaatatc 564  Q
    |||| ||||||||||||||    
T  30403915 aaacatctgttagaatatc 30403897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 121 - 432
Target Start/End: Original strand, 8571394 - 8571707
Alignment:
Q  121 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaaagga-aaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgt 219  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||   | |||| | |||| ||||| |||||||||||||| || |||||||  || |    
T  8571394 tgtgagttgaagatgatgaagattattaaggtagaagatgaagaaagaaataaaagaattagttgttgttggtacatcgtaagttacaatagacacgtat 8571493  T
Q  220 aatccaatgg---ttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 316  Q
    ||||||||||   |||| |||||| | | | ||||||| ||| |||||||||   |||||| | | |||||||||||| | |||||||||||||||||||    
T  8571494 aatccaatggtcattct-ttttaagaaacagatcaaacagtttaaattaaaaagtttaataaggtatatggtggaccatttttaaagttggtccaccata 8571592  T
Q  317 tacatcatttggggttaaacttaac--cattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaa 414  Q
     |   ||||||||||||||||||||    | || ||||||||||||||||||  ||||  | | |||| ||||||    |||||||||||||  ||||||    
T  8571593 ga---catttggggttaaacttaacagactagggatttatttggtaaacggagaaaaaaatgaaggaccaaaacgtacgttttattaattgtatgaccaa 8571689  T
Q  415 aatgaaaataagaaatta 432  Q
    |||||||||  |||||||    
T  8571690 aatgaaaatgtgaaatta 8571707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 197 - 341
Target Start/End: Original strand, 9854735 - 9854878
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttct-cttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    |||||||||||| | || || |||||||||||   || ||||||||| |||||||||| |||| |||||| || ||||||||||||||||||||||||||    
T  9854735 cgtaagataaaacacacatgcgtaatccaatgacccttcttttaaaaaaaaaatcaaatggtttaaattagaagaattaataggatctatggtggaccac 9854834  T
Q  296 tcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||||||||||||||||| ||||  || ||||||||| |||||    
T  9854835 tcttaaagttggtccaccatagacat--ttgggggttaaagttaac 9854878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 349 - 435
Target Start/End: Complemental strand, 17338150 - 17338064
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||| |||||||  ||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||    
T  17338150 atttatttggcaaacggagaaaaatgtgagggactaaaacgccatttttattaattgtgggaccaaaatgaaaacatgaaattaaat 17338064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 248 - 422
Target Start/End: Original strand, 45281096 - 45281268
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    ||||||||||| |||||||||  ||||||||||| |||||| |||||||||||| ||||||||||| || ||||||||| || ||||| |||||  ||||    
T  45281096 atcaaacggtttaaattaaaaatattaataggatttatggtagaccactcttaaggttggtccaccgtagacatcattt-ggattaaagttaactgttgg 45281194  T
Q  348 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     |||||||||| ||| ||| |||||| | | |||  |||||   ||||||||||||||| |||||||||||||||    
T  45281195 gatttatttggcaaatggaggaaaatctgaaggatcaaaac-atatttttattaattgttggaccaaaatgaaaa 45281268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 322 - 435
Target Start/End: Complemental strand, 13116466 - 13116353
Alignment:
Q  322 catttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 421  Q
    ||||||| |||||| |||||  | || |||||||||| ||||||| |||||||| | |||||||||||||| ||||||||||||||||||||||||||||    
T  13116466 catttggagttaaagttaacagtcgggatttatttggcaaacggaggaaaatgtgaaggactaaaacgccacttttattaattgtgggaccaaaatgaaa 13116367  T
Q  422 ataagaaattaaat 435  Q
    | | ||||||||||    
T  13116366 acatgaaattaaat 13116353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 232 - 423
Target Start/End: Complemental strand, 4810691 - 4810504
Alignment:
Q  232 ctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttgggg 330  Q
    ||||||||| | |||| ||||||| ||| |||||||||  |||||||||||||||||||||||||||||||      ||||||||| |||||||||||||    
T  4810691 ctcttttaataaaaaagatcaaacagtttaaattaaaaatattaataggatctatggtggaccactcttaa-----ttccaccatagacatcatttgggg 4810597  T
Q  331 ttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaat 423  Q
    ||||| |||||| | || |||||||||| |||||||  ||||| | | |||| |||||     ||||||||||| |||||||||||| |||||    
T  4810596 ttaaagttaaccgtcgggatttatttggcaaacggagaaaaatttgaaggaccaaaacatacgttttattaattatgggaccaaaataaaaat 4810504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 323 - 435
Target Start/End: Original strand, 17339530 - 17339642
Alignment:
Q  323 atttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||| ||||||||||||  |  | |||||||||| ||||||| ||||| || ||||||||||| |||||||||||||||||| |||||||||||||||    
T  17339530 atttggagttaaacttaacagtcaggatttatttggcaaacggaggaaaacgtgagggactaaaatgccatttttattaattgttggaccaaaatgaaaa 17339629  T
Q  423 taagaaattaaat 435  Q
    || ||||||||||    
T  17339630 tatgaaattaaat 17339642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 248 - 432
Target Start/End: Original strand, 44076269 - 44076453
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    |||||| |||| ||||||||| |||||||| ||| ||||||||| || | |||| |||| ||||||||| ||||||||||||||||||||||||  | ||    
T  44076269 atcaaatggtttaaattaaaaaaattaataagatttatggtggatcatttttaatgttgttccaccatagacatcatttggggttaaacttaactgtagg 44076368  T
Q  348 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
     |||||||||| ||||||| |||||  | ||| || ||||      |||||||||||||||||||||||| |||||  |||||||    
T  44076369 gatttatttggcaaacggaggaaaaattgaggcaccaaaagatacgttttattaattgtgggaccaaaataaaaatttgaaatta 44076453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 197 - 342
Target Start/End: Original strand, 31845652 - 31845793
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    |||||||||||||| || |  |||||| ||||||  || ||||||| ||| ||||||| ||| | ||||||||||||||||||| |||||||||||||||    
T  31845652 cgtaagataaaatacacctacgtaatctaatggtcatcctttaaaaaaaagatcaaacagtttacattaaaataattaataggacctatggtggaccact 31845751  T
Q  297 cttaaagttggtccaccatatacatcatttggggttaaacttaacc 342  Q
    ||| |||||||| ||||||| |   |||||||||||||| ||||||    
T  31845752 ctt-aagttggttcaccataga---catttggggttaaagttaacc 31845793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 248 - 357
Target Start/End: Complemental strand, 42877825 - 42877720
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||| |||||| |||||||||||||| |   |||||||||||||| |||||| | ||    
T  42877825 atcaaagggttgaaattaaa-taattaataggatctatggtggaccattcttaaggttggtccaccataca---catttggggttaaagttaaccgtcgg 42877730  T
Q  348 aatttatttg 357  Q
     |||||||||    
T  42877729 gatttatttg 42877720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 255 - 435
Target Start/End: Original strand, 42100022 - 42100199
Alignment:
Q  255 ggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttat 354  Q
    |||| ||||||| | |||||||| | |||| | ||||||||| |||| |||||||||||| | ||||   |||  |||||| |||||  | || | ||||    
T  42100022 ggttaaaattaacaaaattaataaggtctacgatggaccacttttaaggttggtccaccaaagacat---ttgaagttaaagttaacagtcgggaattat 42100118  T
Q  355 ttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||| ||||||| |||||| | |||||  |||||||||||||||||||||||| |||||||||||||| | ||||||||||    
T  42100119 ttggcaaacggaggaaaatatgagggatcaaaacgccatttttattaattgtgagaccaaaatgaaaacatgaaattaaat 42100199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 154 - 309
Target Start/End: Original strand, 40437409 - 40437565
Alignment:
Q  154 gaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa---tc 250  Q
    |||||||||||||||| |||| | ||||| |||||| |||||||||| | |||||||||| || || ||| |||| |  |||||||||| || ||   ||    
T  40437409 gaagatgaagaaaagggaaaaaagttaggcgttggttgtacatcgtagg-taaaatagacatgcgtgatctaatg-tcatcttttaaaaaaataaatatc 40437506  T
Q  251 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtc 309  Q
    |||| ||| ||||||||||||||||||||||||| ||||||||||| |||| |||||||    
T  40437507 aaacagtttaaattaaaataattaataggatctacggtggaccacttttaaggttggtc 40437565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 198 - 432
Target Start/End: Complemental strand, 6398041 - 6397809
Alignment:
Q  198 gtaagataaaatagacttgtgtaatccaatggttctc-ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    ||||||||||||| | |||||||||| |||| |  || |||| ||| | | |||||| |||| ||||||||| |||||||| | ||||||||||||||||    
T  6398041 gtaagataaaatacatttgtgtaatcaaatgatcatcctttttaaaaacagatcaaatggtttaaattaaaaaaattaataaggtctatggtggaccact 6397942  T
Q  297 cttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttt 396  Q
     | || ||||||  ||||||    | |||||| |||||| |||||  |    |||||||||| |||||||  ||||  | ||||||||||| |  | |||    
T  6397941 gtaaaggttggtttaccatag---ttatttggagttaaatttaacattcatgatttatttggcaaacggagaaaaaaatgagggactaaaatgtaagttt 6397845  T
Q  397 tattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||||||||||||||||||||| |||||||    
T  6397844 tattaattgtgggaccaaaatgaaaatatgaaatta 6397809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 248 - 321
Target Start/End: Original strand, 10669353 - 10669426
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||| |||||| ||||||| ||||    
T  10669353 atcaatcggtttaaattaaaatatttaataggatctatggtggaccactcttaaggttggttcaccatagacat 10669426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 211704 - 211621
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||||||||||||||  ||||  ||||||||||||||| |  ||||||||||||||||||||||||||||| | |||||||    
T  211704 atttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaatta 211621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 240552 - 240635
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||||||||||||||  ||||  ||||||||||||||| |  ||||||||||||||||||||||||||||| | |||||||    
T  240552 atttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaatta 240635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 725327 - 725244
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||||||||||||||  ||||  ||||||||||||||| |  ||||||||||||||||||||||||||||| | |||||||    
T  725327 atttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaatta 725244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 793907 - 793990
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    ||||||||||||||||||  ||||  ||||||||||||||| |  ||||||||||||||||||||||||||||| | |||||||    
T  793907 atttatttggtaaacggagaaaaaattaagggactaaaacgtctgttttattaattgtgggaccaaaatgaaaacatgaaatta 793990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 239 - 341
Target Start/End: Complemental strand, 43202313 - 43202214
Alignment:
Q  239 aaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaactt 338  Q
    |||| ||||||||||| ||| ||||| |||||| ||||||||||||||||||||||||||||| |||| |||||  |||| || ||||||||||||| ||    
T  43202313 aaaaaaaaaatcaaacagtttaaatttaaataactaataggatctatggtggaccactcttaaggttgatccac--tatagat-atttggggttaaaatt 43202217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 235 - 422
Target Start/End: Original strand, 26697728 - 26697912
Alignment:
Q  235 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaa 334  Q
    |||||||| | ||||| || |||  ||||||||  ||||| |||| |||||||||||| |    ||| |||||||||||||| ||||   ||||||||||    
T  26697728 ttttaaaaaataaatcgaatggtataaattaaagaaattactagggtctatggtggactatatataatgttggtccaccataaacat---ttggggttaa 26697824  T
Q  335 acttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||| ||| | ||||||| |  ||| ||||||||| || |||||||||||||    ||||||||||| |||||| ||||||||||    
T  26697825 acttaacaattaggatttattcgacaaaaggaagaaaaagtgagggactaaaacgtacgttttattaattatgggactaaaatgaaaa 26697912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 248 - 422
Target Start/End: Complemental strand, 32694037 - 32693866
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    ||||||||||| ||||||| | |||||||| | |||||| | | ||||| |||| ||||||||| ||||||   |||||   |||||| |||||  ||||    
T  32694037 atcaaacggttaaaattaataaaattaataaggtctatgataggccacttttaaggttggtccatcatata---catttaaagttaaagttaactgttgg 32693941  T
Q  348 aatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     |||||||||| ||||||| |||||| | | |||| ||| ||    |||||||||||||||||||||||||||||    
T  32693940 gatttatttggcaaacggaggaaaatctgaaggaccaaagcgtatgttttattaattgtgggaccaaaatgaaaa 32693866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 241 - 316
Target Start/End: Original strand, 42878732 - 42878806
Alignment:
Q  241 aagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 316  Q
    |||||| |||||| |||| | |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  42878732 aagaaagatcaaagggttaagattaaa-taattaataggatctatggtggaccacacttaaggttggtccaccata 42878806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 257 - 322
Target Start/End: Original strand, 42362668 - 42362732
Alignment:
Q  257 ttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatc 322  Q
    |||||||||||| ||||||||||||||||| || ||||||||||| |||||||||||||| |||||    
T  42362668 ttgaaattaaaa-aattaataggatctatgatgaaccactcttaatgttggtccaccatagacatc 42362732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 42872120 - 42872236
Alignment:
Q  270 aattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaaga 369  Q
    ||||||||||||||||||| |||||||||||| ||||||| |||||| |   |||||| ||||||| |||||| |  | |||||||||  ||||||| ||    
T  42872120 aattaataggatctatggtagaccactcttaaggttggtctaccataga---catttgaggttaaagttaaccgtcaggatttatttgacaaacggagga 42872216  T
Q  370 aaatgtaagggactaaaacg 389  Q
    ||| || | |||||||||||    
T  42872217 aaaagtgaaggactaaaacg 42872236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 248 - 340
Target Start/End: Original strand, 14840807 - 14840896
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaa 340  Q
    ||||||||||| ||||||||| | |||||| || |||||||||| |||| |||| |||||||||||||| |   |||||| ||||||||||||    
T  14840807 atcaaacggtttaaattaaaaaatttaataagaactatggtggatcacttttaatgttggtccaccataga---catttgtggttaaacttaa 14840896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 153 - 305
Target Start/End: Complemental strand, 22620191 - 22620035
Alignment:
Q  153 agaagatgaagaaaaggaa-aaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaa--- 248  Q
    ||||||||||||||| | | ||| | |||||||||| |||| || | | ||||| ||||||| ||  ||||| |||||| ||||||||||| |||||       
T  22620191 agaagatgaagaaaatgtacaaaaaattaggtgttgatggtgcaccattagatagaatagacctgcataatcaaatggtcctcttttaaaaaaaaaaaaa 22620092  T
Q  249 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagtt 305  Q
    |||||||||| |||| ||||| ||||||| |||||||  |||||  |||||||||||    
T  22620091 tcaaacggtttaaataaaaatgattaatatgatctataatggacagctcttaaagtt 22620035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 244 - 340
Target Start/End: Complemental strand, 38696520 - 38696427
Alignment:
Q  244 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaa 340  Q
    |||||||||| |||| |||||| || |||||||  |||||||||||||||||| |||| ||||||| |||||| |   ||||| |||||||||||||    
T  38696520 aaaaatcaaagggttaaaattataaaaattaattagatctatggtggaccacttttaaggttggtctaccataga---catttagggttaaacttaa 38696427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 148 - 295
Target Start/End: Original strand, 6398323 - 6398471
Alignment:
Q  148 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatgg------ttctcttttaaa 241  Q
    |||| |||||||||||||||||||| | | |||||||||| || | || ||||||||||| |||||||   |||||||||||      ||||||||        
T  6398323 aaggaagaagatgaagaaaaggaaataaaattaggtgttgttgattcaccgtaagataaagtagacttacataatccaatggtaagtattctcttt---- 6398418  T
Q  242 agaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccac 295  Q
    | ||||||||||||||| ||||||||| |||||||| | |||| ||||||||||    
T  6398419 ataaaaatcaaacggtttaaattaaaa-aattaataaggtctacggtggaccac 6398471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 28418915 - 28418842
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||||||| ||||| || |||||||||||||    ||||||||||| |||||||||||||||||    
T  28418915 atttatttggcaaacggaggaaaaagtgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 28418842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 351 - 422
Target Start/End: Complemental strand, 32797245 - 32797174
Alignment:
Q  351 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||||||||| |||||  | ||||||| |||||    |||||||||||||||||||||||||||||    
T  32797245 ttatttggtaaacggaggaaaacctgagggacttaaacgtacgttttattaattgtgggaccaaaatgaaaa 32797174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 248 - 294
Target Start/End: Complemental strand, 37400988 - 37400942
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||||| | ||||||| |||||||||||||||||||||||||    
T  37400988 atcaaacggtttatattaaaaaaattaataggatctatggtggacca 37400942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 166
Target Start/End: Complemental strand, 22551343 - 22551298
Alignment:
Q  121 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaa 166  Q
    |||||||| |||||||||||||||  ||||||||||||||||||||    
T  22551343 tgtgagttaaagatgatgaagattagtaaggtagaagatgaagaaa 22551298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 233 - 321
Target Start/End: Complemental strand, 24305266 - 24305177
Alignment:
Q  233 tcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    |||||||||| |||| ||||||  |||||| || ||| ||||||||||||||| | | || ||||||||| |||||||||||||| ||||    
T  24305266 tcttttaaaacaaaagatcaaatagttgaagtttaaaaaattaataggatctaagatagatcactcttaatgttggtccaccatagacat 24305177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 248 - 321
Target Start/End: Complemental strand, 30786885 - 30786812
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||||||||| ||||||| | |||||||| | | |||| ||||||||| ||||||||| ||||||||| ||||    
T  30786885 atcaaacggttaaaattaacaaaattaataaggtttatgatggaccacttttaaagttgatccaccatagacat 30786812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 212719 - 212802
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||  ||||| | ||||| || |||||||||||| ||  |||| ||||||||||||| |||||||||||  |||||||    
T  212719 atttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 212802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 239535 - 239452
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||  ||||| | ||||| || |||||||||||| ||  |||| ||||||||||||| |||||||||||  |||||||    
T  239535 atttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 239452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 726342 - 726425
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||  ||||| | ||||| || |||||||||||| ||  |||| ||||||||||||| |||||||||||  |||||||    
T  726342 atttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 726425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 792890 - 792807
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||  ||||| | ||||| || |||||||||||| ||  |||| ||||||||||||| |||||||||||  |||||||    
T  792890 atttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 792807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 349 - 432
Target Start/End: Original strand, 798843 - 798926
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||  ||||| | ||||| || |||||||||||| ||  |||| ||||||||||||| |||||||||||  |||||||    
T  798843 atttatttgacaaacgaaggaaaaagtgagggactaaaacacctgtttttttaattgtgggacgaaaatgaaaatctgaaatta 798926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 302
Target Start/End: Complemental strand, 13513638 - 13513571
Alignment:
Q  235 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaa 302  Q
    |||||||  |||||||||| |||| ||||||||| |||||||| | | |||||||||||||| |||||    
T  13513638 ttttaaagaaaaaatcaaatggttaaaattaaaaaaattaataaggtatatggtggaccacttttaaa 13513571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 235 - 302
Target Start/End: Complemental strand, 13603171 - 13603104
Alignment:
Q  235 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaa 302  Q
    |||||||  |||||||||| |||| ||||||||| |||||||| | | |||||||||||||| |||||    
T  13603171 ttttaaagaaaaaatcaaatggttaaaattaaaaaaattaataaggtatatggtggaccacttttaaa 13603104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Complemental strand, 23703038 - 23702983
Alignment:
Q  377 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||  ||||| ||||||||| | |||||||||||||||||||| ||||||    
T  23703038 agggactaattcgccacttttattaaatatgggaccaaaatgaaaataacaaatta 23702983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 377 - 432
Target Start/End: Original strand, 23708784 - 23708839
Alignment:
Q  377 agggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||  ||||| ||||||||| | |||||||||||||||||||| ||||||    
T  23708784 agggactaattcgccacttttattaaatatgggaccaaaatgaaaataacaaatta 23708839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 235 - 422
Target Start/End: Complemental strand, 22551227 - 22551043
Alignment:
Q  235 ttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaa 334  Q
    |||||||| | | ||||||||||| |||||| || | |||||| | | ||||||||| |||| |||| ||| |||||||||| |    ||||||||||||    
T  22551227 ttttaaaaaacagatcaaacggtttaaattacaaaatttaataaggtttatggtggatcacttttaaggtttgtccaccataga---gatttggggttaa 22551131  T
Q  335 acttaaccat-tggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||| ||   | |||||||||| ||| || |||||| || |||||| ||||      |||||||||||||||||||||||| ||||    
T  22551130 acttaacaatccaggatttatttggcaaatgg-agaaaaagtgagggaccaaaagatacgttttattaattgtgggaccaaaataaaaa 22551043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 244 - 294
Target Start/End: Complemental strand, 32552507 - 32552457
Alignment:
Q  244 aaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||||||||||||| ||||||||| |||||||| | | ||||||||||||    
T  32552507 aaaaatcaaacggttaaaattaaaagaattaataaggtttatggtggacca 32552457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 6398504 - 6398577
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||  ||||||| |||||  | ||||||||||||||   ||||||||||| || ||||||||||||||    
T  6398504 atttatttgacaaacggaggaaaaaatgagggactaaaacgcttgttttattaattatgagaccaaaatgaaaa 6398577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 26696641 - 26696568
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| ||| ||| ||||| || |||||| |||| |    |||||||||||||||||||||||||||||    
T  26696641 atttatttggcaaatggaggaaaaagtgagggaccaaaatgtatgttttattaattgtgggaccaaaatgaaaa 26696568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 153 - 242
Target Start/End: Complemental strand, 28419037 - 28418948
Alignment:
Q  153 agaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaa 242  Q
    ||||||||||||||  |||||  | |||| ||||| || | || ||||||||||||||| | || |||||||||||||| || |||||||    
T  28419037 agaagatgaagaaagagaaaattaattagatgttgttgattcaccgtaagataaaataggcatgcgtaatccaatggttttcctttaaaa 28418948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Original strand, 28420181 - 28420254
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||  ||||||| |||||  | |||||||||||||    ||||||||||| |||||||||||||||||    
T  28420181 atttatttgacaaacggaggaaaaaatgagggactaaaacgtgtgttttattaattatgggaccaaaatgaaaa 28420254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 248 - 296
Target Start/End: Complemental strand, 14030526 - 14030478
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    ||||||||||| | ||||||| || ||||||||||||| ||||||||||    
T  14030526 atcaaacggtttatattaaaaaaaataataggatctatagtggaccact 14030478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 37473703 - 37473747
Alignment:
Q  148 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggt 192  Q
    |||| |||||||||||||| ||||||| | |||||||||||||||    
T  37473703 aaggaagaagatgaagaaagggaaaaaaaattaggtgttggtggt 37473747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 37473811 - 37473855
Alignment:
Q  148 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggt 192  Q
    |||| |||||||||||||| ||||||| | |||||||||||||||    
T  37473811 aaggaagaagatgaagaaagggaaaaaaaattaggtgttggtggt 37473855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 148 - 192
Target Start/End: Original strand, 37473919 - 37473963
Alignment:
Q  148 aaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggt 192  Q
    |||| |||||||||||||| ||||||| | |||||||||||||||    
T  37473919 aaggaagaagatgaagaaagggaaaaaaaattaggtgttggtggt 37473963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 238 - 294
Target Start/End: Complemental strand, 39173333 - 39173277
Alignment:
Q  238 taaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggacca 294  Q
    ||||| ||| ||||||||||| ||||||||| |||||||| | | ||||||||||||    
T  39173333 taaaaaaaagatcaaacggttaaaattaaaagaattaataaggtttatggtggacca 39173277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 135; Significance: 5e-70; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 135; E-Value: 5e-70
Query Start/End: Original strand, 152 - 422
Target Start/End: Original strand, 43386 - 43655
Alignment:
Q  152 tagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatca 251  Q
    ||||||||||||||||||||||| | |||||||| |||| || ||||| ||||||||||||||||  ||||| |||||||||||||| ||| ||||||||    
T  43386 tagaagatgaagaaaaggaaaaaaaattaggtgtcggtgatatatcgttagataaaatagacttgcctaatcaaatggttctctttttaaa-aaaaatca 43484  T
Q  252 aacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatt 351  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| |||||| |||||||||||||||||| |  | | |    
T  43485 aacggtttaaattaaaataattaataggatctatggtggaccactcttaagattggtccaccatagacatcacttggggttaaacttaaccgtcaggact 43584  T
Q  352 tatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    ||||||| ||||||| ||||| || ||||||| ||||     ||||||||||| |||||||||||| ||||    
T  43585 tatttggcaaacggaggaaaaagtgagggacttaaacatacgttttattaattatgggaccaaaataaaaa 43655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 126; Significance: 1e-64; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 126; E-Value: 1e-64
Query Start/End: Original strand, 151 - 422
Target Start/End: Original strand, 53997 - 54265
Alignment:
Q  151 gtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatc 250  Q
    |||||||||||| |||||||||||   | ||||||||||||||||||||| |||||||||||||||  ||||||||||   |||||||  || |||||||    
T  53997 gtagaagatgaacaaaaggaaaaa---tcaggtgttggtggtacatcgtatgataaaatagacttgcttaatccaatgacactcttttttaaaaaaaatc 54093  T
Q  251 aaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaat 350  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||||||||| |||||||  |    ||    
T  54094 aaacagtttaaattaaaataattaataggatctatggtggaccacttttaaggttggtccaccatagacatcatttggggttatacttaacagtcacgat 54193  T
Q  351 ttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||| ||||||| |||||| | |||||| |||||||   |||||||||||||| ||||||||| ||||    
T  54194 ttatttggcaaacggaggaaaatttgagggaccaaaacgcacgttttattaattgtgcgaccaaaattaaaa 54265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 298 - 422
Target Start/End: Complemental strand, 52749 - 52628
Alignment:
Q  298 ttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccattttt 397  Q
    |||| |||||||||||||||||||   ||   |||||| |||||  | || |||||||||| |||||||  ||||| | |||||| ||||||    ||||    
T  52749 ttaaggttggtccaccatatacat---ttaaagttaaagttaactgtcgggatttatttggcaaacggagaaaaatctgagggaccaaaacgtacatttt 52653  T
Q  398 attaattgtgggaccaaaatgaaaa 422  Q
    ||||||||||||| |||||||||||    
T  52652 attaattgtgggatcaaaatgaaaa 52628  T

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Target: scaffold0031 (Bit Score: 86; Significance: 8e-41; HSPs: 2)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 248 - 432
Target Start/End: Original strand, 125138 - 125323
Alignment:
Q  248 atcaaacggttgaaattaaaataatt-aataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattg 346  Q
    |||||| |||| ||||||||| |||| |||| | |||||||||||||||| |||| ||||||||| |||||||||||||||||||||||||||||| ||     
T  125138 atcaaagggtttaaattaaaaaaatttaataaggtctatggtggaccacttttaaggttggtccatcatatacatcatttggggttaaacttaaccgtta 125237  T
Q  347 gaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    | |||||||||| ||||||| ||||| || |||||| |||| |    ||||||||||||||||||||||||||||||  |||||||    
T  125238 ggatttatttggcaaacggaggaaaaagtgagggaccaaaaggtacgttttattaattgtgggaccaaaatgaaaatttgaaatta 125323  T

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Target: scaffold0031; HSP #2
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 184 - 422
Target Start/End: Complemental strand, 124240 - 124005
Alignment:
Q  184 gttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatc 282  Q
    |||| |||||||  ||||| || ||||||| ||  |||||| |||||| |||||| ||| || | |||||||| || ||||||| | | |||||| ||||    
T  124240 gttgttggtacactgtaagttacaatagacatgcataatcctatggttatctttttaaaaaatagatcaaacgatttaaattaaca-atttaatacgatc 124142  T
Q  283 tatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggac 382  Q
    ||||||||||||||||||| |||||||||||||| |    |||||||||||||||||||| |  | |||||||||| |||| || ||||| || ||||||    
T  124141 tatggtggaccactcttaaggttggtccaccataga---tatttggggttaaacttaaccgtaaggatttatttggcaaacagaggaaaaagtgagggac 124045  T
Q  383 taaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
     |||| |    |||||||||||||||||||||||||||||    
T  124044 caaaatgtacgttttattaattgtgggaccaaaatgaaaa 124005  T

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Target: scaffold0011 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 197 - 321
Target Start/End: Complemental strand, 127692 - 127568
Alignment:
Q  197 cgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaaaatcaaacggttgaaattaaaataattaataggatctatggtggaccact 296  Q
    ||||||||||||||||| ||| ||||| ||| |||||| ||| ||| ||||||| ||||||| |||||||||  ||||||||||||||||||||||||||    
T  127692 cgtaagataaaatagacctgtttaatctaatcgttctccttttaaaaaaaaatctaacggtttaaattaaaaacattaataggatctatggtggaccact 127593  T
Q  297 cttaaagttggtccaccatatacat 321  Q
    ||||| |||| | ||||||| ||||    
T  127592 cttaaggttgtttcaccatagacat 127568  T

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Target: scaffold0219 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 153 - 341
Target Start/End: Original strand, 8000 - 8188
Alignment:
Q  153 agaagatgaagaaaagg---aaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatccaatggttctcttttaaaagaaa-aa 248  Q
    ||||||||||||||||    ||||| | |||||||||| |||| || | | ||||||||||||||||  | ||| |||||| ||||||||||| ||| ||    
T  8000 agaagatgaagaaaagataaaaaaaaaattaggtgttgatggtgcaccattagataaaatagacttgcatgatcaaatggtcctcttttaaaaaaaacaa 8099  T
Q  249 tcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    |||||||||| ||||||||||||||||||  ||||||| |||||| ||||||| |||| ||||||||| |   |||||||||||||| |||||    
T  8100 tcaaacggtttaaattaaaataattaatataatctatgatggacc-ctcttaaggttgatccaccataga---catttggggttaaaattaac 8188  T

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Target: scaffold2071 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold2071
Description:

Target: scaffold2071; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 121 - 321
Target Start/End: Original strand, 461 - 662
Alignment:
Q  121 tgtgagttgaagatgatgaagatttataaggtagaagatgaagaaa--aggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtg 218  Q
    ||||||||||||||||||||||||  ||||||||||||||||||||  | |||||| ||| || ||||| ||||||  |||||| ||  |||||   |      
T  461 tgtgagttgaagatgatgaagattagtaaggtagaagatgaagaaataaagaaaaaaatt-agttgttgttggtactccgtaagttacgatagaac-gca 558  T
Q  219 taatccaatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatat 317  Q
    ||||||||||||  |||||| ||| || | ||||||||||| ||||||||| | |||||| | ||||||||||||||||||||| |||||||||  ||||    
T  559 taatccaatggtcatctttttaaaaaacagatcaaacggtttaaattaaaaaatttaataaggtctatggtggaccactcttaaggttggtccattatat 658  T
Q  318 acat 321  Q
    ||||    
T  659 acat 662  T

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Target: scaffold0034 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 245 - 341
Target Start/End: Complemental strand, 108725 - 108630
Alignment:
Q  245 aaaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaac 341  Q
    ||||||||| |||| |||||| |||||||||||| ||||||||||||||||| |||| |||||||||||||| | || |||||||||||||||||||    
T  108725 aaaatcaaaaggtttaaattataataattaatagcatctatggtggaccacttttaaggttggtccaccata-atattatttggggttaaacttaac 108630  T

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Target: scaffold0019 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 124 - 432
Target Start/End: Original strand, 62914 - 63221
Alignment:
Q  124 gagttgaagatgatgaagatttataaggtagaagatgaagaaaaggaaaaacatttaggtgttggtggtacatcgtaagataaaatagacttgtgtaatc 223  Q
    ||||||||||||||||| |||  |||| |||||||| ||||||   ||||| | |||||||||| ||||||| |||||| || || | ||  |  ||||     
T  62914 gagttgaagatgatgaatattagtaagatagaagataaagaaagaaaaaaaaaattaggtgttgttggtacaccgtaagttacaacaaacacgcataatt 63013  T
Q  224 caatggttctcttttaaaagaaaa-atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatc 322  Q
    |||| ||  |||||| |   || | ||||||||||| ||||| ||| |||||||    | |||||||||||| ||||||  ||| |||| |||| ||||     
T  63014 caattgtgatctttttagcaaacagatcaaacggttaaaatttaaaaaattaatgaagtttatggtggaccattcttaagattgatccatcatagacat- 63112  T
Q  323 atttggggttaaacttaaccatt-ggaatttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaa 421  Q
      |||  ||||||||||||  |  || |||||||||| |||||||  ||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  63113 --ttgaagttaaacttaacagtcagggatttatttggcaaacggagaaaaatgtgagggactaaaacgccatctttattaattgtgggaccaaaatgaaa 63210  T
Q  422 ataagaaatta 432  Q
    | | |||||||    
T  63211 acacgaaatta 63221  T

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Target: scaffold0019; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 349 - 432
Target Start/End: Complemental strand, 61960 - 61877
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaataagaaatta 432  Q
    |||||||||| |||||||||||||  | |||||||||||||||||||||||||||| || |||||||||||||| | |||||||    
T  61960 atttatttggcaaacggaagaaaagatgagggactaaaacgccatttttattaattatgagaccaaaatgaaaacatgaaatta 61877  T

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Target: scaffold1152 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold1152
Description:

Target: scaffold1152; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 290 - 423
Target Start/End: Original strand, 2426 - 2557
Alignment:
Q  290 gaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattggaatttatttggtaaacggaagaaaatgtaagggactaaaacg 389  Q
    ||||||| |||| ||||||||||||| ||||| |||||| |||||| |||||  | ||||||||||||| |||| || |||||  |||||||| |||| |    
T  2426 gaccacttttaaggttggtccaccat-tacat-atttggagttaaagttaacagtcggaatttatttggaaaacagaggaaaaactaagggaccaaaagg 2523  T
Q  390 ccatttttattaattgtgggaccaaaatgaaaat 423  Q
       |||||||||||||||||||||||||||||||    
T  2524 tactttttattaattgtgggaccaaaatgaaaat 2557  T

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Target: scaffold0201 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 248 - 422
Target Start/End: Complemental strand, 21335 - 21163
Alignment:
Q  248 atcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccatatacatcatttggggttaaacttaaccattgg 347  Q
    ||||||||||| ||||| ||| |||||||    |||||||||||||||||| || |||||||||||||| |   |||||| |||||||||||| ||  |     
T  21335 atcaaacggttaaaatttaaaaaattaatgaagtctatggtggaccactctgaaggttggtccaccataga---catttgtggttaaacttaa-caacga 21240  T
Q  348 a--atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |  |||||||||| ||||||| |||||  |||||||  |||| |   |||||||||||| |||||| ||||||||||    
T  21239 atgatttatttggcaaacggaggaaaaactaagggatcaaaaggtactttttattaattatgggactaaaatgaaaa 21163  T

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Target: scaffold0013 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 32790 - 32705
Alignment:
Q  238 taaaagaaaaatcaaacggttgaaattaaaataat--taataggatctatggtggaccactcttaaagttggtccaccatatacat 321  Q
    ||||| ||| ||||||||||| ||||||||| ||   |||||||||||||| |||||||||| ||| |||||||||||||| ||||    
T  32790 taaaaaaaagatcaaacggtttaaattaaaaaaaaaataataggatctatgatggaccactcctaaggttggtccaccatagacat 32705  T

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Target: scaffold0472 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 386 - 435
Target Start/End: Original strand, 787 - 836
Alignment:
Q  386 aacgccatttttattaattgtgggaccaaaatgaaaataagaaattaaat 435  Q
    |||||||||||||||||||| ||||||||||| |||| | ||||||||||    
T  787 aacgccatttttattaattgagggaccaaaataaaaacatgaaattaaat 836  T

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Target: scaffold0128 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 166
Target Start/End: Original strand, 23047 - 23086
Alignment:
Q  127 ttgaagatgatgaagatttataaggtagaagatgaagaaa 166  Q
    |||||||||||||||||| ||||||| |||||||||||||    
T  23047 ttgaagatgatgaagattaataaggttgaagatgaagaaa 23086  T

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Target: scaffold0128; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 246 - 316
Target Start/End: Complemental strand, 22190 - 22120
Alignment:
Q  246 aaatcaaacggttgaaattaaaataattaataggatctatggtggaccactcttaaagttggtccaccata 316  Q
    |||||||| |||| ||||||||  |||||||||| |||||||||||||||    || ||||||||||||||    
T  22190 aaatcaaatggtttaaattaaagaaattaatagggtctatggtggaccacctacaatgttggtccaccata 22120  T

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Target: scaffold0078 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 349 - 422
Target Start/End: Complemental strand, 18921 - 18848
Alignment:
Q  349 atttatttggtaaacggaagaaaatgtaagggactaaaacgccatttttattaattgtgggaccaaaatgaaaa 422  Q
    |||||||||| |||||||  |||| || ||||||||||||   | ||||||||| | |||||||||||||||||    
T  18921 atttatttggcaaacggagtaaaaagtgagggactaaaacataagttttattaaatatgggaccaaaatgaaaa 18848  T

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