View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8004_low_8 (Length: 349)

Name: NF8004_low_8
Description: NF8004
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8004_low_8
NF8004_low_8
[»] chr4 (57 HSPs)
chr4 (177-349)||(6374577-6374749)
chr4 (1-76)||(46212541-46212616)
chr4 (1-71)||(3901330-3901400)
chr4 (1-71)||(46803631-46803701)
chr4 (1-74)||(4264131-4264204)
chr4 (1-77)||(3442535-3442611)
chr4 (1-71)||(5735271-5735341)
chr4 (1-71)||(28166274-28166344)
chr4 (1-71)||(45198531-45198601)
chr4 (1-71)||(47579287-47579357)
chr4 (1-73)||(6494586-6494658)
chr4 (1-71)||(5744274-5744344)
chr4 (1-71)||(21859110-21859180)
chr4 (1-71)||(21914973-21915043)
chr4 (1-71)||(26205895-26205965)
chr4 (5-69)||(28151993-28152057)
chr4 (1-66)||(37688224-37688289)
chr4 (1-73)||(39786547-39786619)
chr4 (1-71)||(7739010-7739080)
chr4 (1-71)||(18360164-18360234)
chr4 (1-71)||(36602694-36602764)
chr4 (1-71)||(55190905-55190975)
chr4 (1-74)||(4209360-4209433)
chr4 (1-69)||(49768447-49768515)
chr4 (5-72)||(23255934-23256001)
chr4 (1-71)||(5123348-5123418)
chr4 (1-66)||(20678778-20678843)
chr4 (1-76)||(1377027-1377102)
chr4 (1-72)||(39195672-39195743)
chr4 (1-72)||(19525905-19525976)
chr4 (1-71)||(19634039-19634109)
chr4 (1-75)||(25644355-25644429)
chr4 (1-78)||(53568347-53568424)
chr4 (1-49)||(14958030-14958078)
chr4 (1-49)||(19731356-19731404)
chr4 (94-128)||(6374742-6374776)
chr4 (1-75)||(6923131-6923205)
chr4 (1-43)||(10181016-10181058)
chr4 (1-71)||(19170730-19170800)
chr4 (1-71)||(19652446-19652516)
chr4 (1-71)||(50033020-50033090)
chr4 (1-42)||(23603838-23603879)
chr4 (36-72)||(5744082-5744118)
chr4 (1-41)||(51737144-51737184)
chr4 (1-40)||(3443578-3443617)
chr4 (1-40)||(19631339-19631378)
chr4 (36-75)||(28152217-28152256)
chr4 (5-40)||(50971491-50971526)
chr4 (36-78)||(1377257-1377299)
chr4 (175-221)||(14140390-14140436)
chr4 (1-43)||(39193940-39193982)
chr4 (1-71)||(39260322-39260391)
chr4 (1-71)||(50035539-50035609)
chr4 (1-42)||(42187170-42187211)
chr4 (1-42)||(55014291-55014332)
chr4 (36-76)||(6494816-6494856)
chr4 (44-72)||(19170538-19170566)
[»] chr6 (22 HSPs)
chr6 (1-73)||(31854816-31854888)
chr6 (1-71)||(643622-643692)
chr6 (1-73)||(11114563-11114635)
chr6 (1-78)||(22020269-22020346)
chr6 (1-71)||(24150741-24150811)
chr6 (1-74)||(8796047-8796120)
chr6 (1-77)||(29403638-29403714)
chr6 (5-71)||(18991904-18991970)
chr6 (1-71)||(33121542-33121612)
chr6 (1-73)||(20662250-20662323)
chr6 (1-74)||(7098064-7098133)
chr6 (1-77)||(25435406-25435481)
chr6 (7-71)||(30237165-30237229)
chr6 (1-74)||(13207144-13207217)
chr6 (1-42)||(29986349-29986390)
chr6 (36-76)||(8796275-8796315)
chr6 (1-73)||(16434719-16434791)
chr6 (36-71)||(643431-643466)
chr6 (36-77)||(31855044-31855085)
chr6 (36-72)||(20662058-20662094)
chr6 (36-72)||(22020502-22020538)
chr6 (36-72)||(25435637-25435673)
[»] chr1 (42 HSPs)
chr1 (1-73)||(48265002-48265074)
chr1 (1-72)||(25531777-25531848)
chr1 (1-71)||(48219833-48219903)
chr1 (1-72)||(32988540-32988611)
chr1 (1-76)||(52378984-52379059)
chr1 (1-71)||(39354455-39354525)
chr1 (1-71)||(50539260-50539330)
chr1 (1-73)||(50876362-50876434)
chr1 (1-70)||(49805443-49805512)
chr1 (1-71)||(38458729-38458799)
chr1 (2-71)||(30529242-30529311)
chr1 (1-71)||(3529176-3529246)
chr1 (1-71)||(23569865-23569935)
chr1 (181-349)||(16489728-16489896)
chr1 (1-71)||(32565746-32565816)
chr1 (5-71)||(42708504-42708570)
chr1 (1-66)||(45235036-45235101)
chr1 (1-60)||(29161853-29161912)
chr1 (1-76)||(37281087-37281162)
chr1 (1-52)||(47222233-47222284)
chr1 (1-75)||(3898762-3898836)
chr1 (1-67)||(4605002-4605068)
chr1 (1-75)||(16265029-16265103)
chr1 (1-75)||(16266158-16266232)
chr1 (1-71)||(16751644-16751714)
chr1 (1-75)||(26441633-26441707)
chr1 (1-75)||(43680065-43680139)
chr1 (1-49)||(38738169-38738217)
chr1 (1-56)||(1849714-1849769)
chr1 (5-68)||(14075738-14075801)
chr1 (5-75)||(24982347-24982417)
chr1 (1-71)||(48376158-48376228)
chr1 (1-71)||(50481278-50481348)
chr1 (1-42)||(31971578-31971619)
chr1 (34-75)||(41855525-41855566)
chr1 (12-48)||(43729768-43729804)
chr1 (36-74)||(30529047-30529085)
chr1 (34-71)||(23393456-23393493)
chr1 (1-42)||(31698779-31698820)
chr1 (36-77)||(49805246-49805287)
chr1 (34-74)||(44240743-44240783)
chr1 (36-72)||(50876590-50876626)
[»] chr8 (32 HSPs)
chr8 (1-76)||(2805667-2805742)
chr8 (1-72)||(29790941-29791012)
chr8 (1-71)||(38845200-38845270)
chr8 (1-74)||(38739654-38739727)
chr8 (1-73)||(45081810-45081882)
chr8 (1-71)||(30289924-30289994)
chr8 (1-71)||(40013651-40013721)
chr8 (1-71)||(43066127-43066197)
chr8 (1-71)||(3293293-3293363)
chr8 (1-71)||(37709899-37709969)
chr8 (1-77)||(13138323-13138399)
chr8 (1-71)||(30380530-30380600)
chr8 (2-71)||(2986339-2986408)
chr8 (1-72)||(1580956-1581027)
chr8 (1-71)||(8351071-8351141)
chr8 (1-73)||(6470843-6470915)
chr8 (1-69)||(23248779-23248847)
chr8 (5-71)||(39361128-39361191)
chr8 (1-71)||(14847210-14847280)
chr8 (1-75)||(18809272-18809346)
chr8 (1-41)||(886258-886298)
chr8 (36-72)||(3293100-3293136)
chr8 (5-71)||(45253749-45253816)
chr8 (5-75)||(11854520-11854590)
chr8 (1-75)||(31127996-31128070)
chr8 (1-71)||(44123673-44123743)
chr8 (1-42)||(12893560-12893601)
chr8 (36-73)||(23249078-23249115)
chr8 (36-69)||(38845833-38845866)
chr8 (36-76)||(30380756-30380796)
chr8 (34-70)||(37094356-37094392)
chr8 (1-49)||(42785920-42785968)
[»] chr5 (42 HSPs)
chr5 (1-72)||(23988578-23988649)
chr5 (1-75)||(32334831-32334905)
chr5 (1-71)||(35448188-35448258)
chr5 (1-72)||(42148306-42148377)
chr5 (1-71)||(29627268-29627338)
chr5 (1-71)||(38697963-38698033)
chr5 (1-71)||(40512871-40512941)
chr5 (1-70)||(5364421-5364490)
chr5 (1-71)||(5213113-5213183)
chr5 (1-71)||(39894781-39894851)
chr5 (1-72)||(37516143-37516214)
chr5 (1-71)||(4925029-4925099)
chr5 (1-71)||(32002205-32002275)
chr5 (1-71)||(35290286-35290356)
chr5 (1-78)||(30779936-30780013)
chr5 (5-77)||(37843770-37843842)
chr5 (1-71)||(39036410-39036480)
chr5 (1-71)||(41411349-41411419)
chr5 (1-72)||(1830653-1830724)
chr5 (1-64)||(14475425-14475488)
chr5 (12-71)||(16954690-16954749)
chr5 (1-64)||(43517251-43517314)
chr5 (1-75)||(970134-970208)
chr5 (1-75)||(39405760-39405834)
chr5 (1-71)||(40316121-40316191)
chr5 (1-75)||(43067225-43067299)
chr5 (181-349)||(28716096-28716264)
chr5 (36-71)||(29627494-29627529)
chr5 (1-75)||(4300023-4300097)
chr5 (1-75)||(16048079-16048153)
chr5 (1-75)||(22613900-22613974)
chr5 (1-42)||(19868876-19868917)
chr5 (36-71)||(32002014-32002049)
chr5 (1-52)||(32300589-32300640)
chr5 (36-71)||(32334638-32334673)
chr5 (36-71)||(39895007-39895042)
chr5 (36-74)||(5364650-5364688)
chr5 (1-47)||(19889678-19889724)
chr5 (1-43)||(21961255-21961297)
chr5 (34-71)||(27675764-27675801)
chr5 (26-71)||(37304361-37304406)
chr5 (1-42)||(42421714-42421755)
[»] chr7 (39 HSPs)
chr7 (1-71)||(36819696-36819766)
chr7 (1-74)||(19072766-19072839)
chr7 (1-72)||(47080979-47081050)
chr7 (1-71)||(2400285-2400355)
chr7 (1-71)||(28185599-28185669)
chr7 (1-71)||(42086829-42086899)
chr7 (1-71)||(47713693-47713763)
chr7 (1-71)||(31466549-31466619)
chr7 (1-71)||(37951136-37951206)
chr7 (1-71)||(44479911-44479981)
chr7 (5-71)||(47713774-47713840)
chr7 (1-73)||(36905524-36905596)
chr7 (5-71)||(4612282-4612348)
chr7 (5-71)||(32619137-32619203)
chr7 (1-71)||(36859399-36859469)
chr7 (1-71)||(23474160-23474230)
chr7 (1-70)||(31110625-31110692)
chr7 (1-71)||(42834483-42834553)
chr7 (1-75)||(10464306-10464380)
chr7 (1-71)||(21392018-21392088)
chr7 (1-75)||(37231755-37231829)
chr7 (1-71)||(34478202-34478272)
chr7 (1-75)||(35500938-35501012)
chr7 (1-74)||(42493821-42493894)
chr7 (1-65)||(4033297-4033361)
chr7 (36-71)||(36905752-36905787)
chr7 (36-77)||(34478002-34478043)
chr7 (1-49)||(33613238-33613286)
chr7 (1-49)||(38198503-38198551)
chr7 (36-71)||(4612087-4612122)
chr7 (36-71)||(19072995-19073030)
chr7 (36-71)||(31110851-31110886)
chr7 (1-72)||(31497894-31497965)
chr7 (36-75)||(36819922-36819961)
chr7 (36-74)||(31466355-31466393)
chr7 (1-75)||(36643158-36643232)
chr7 (1-39)||(47841253-47841291)
chr7 (1-67)||(48531326-48531392)
chr7 (1-62)||(47537932-47537993)
[»] chr2 (36 HSPs)
chr2 (1-71)||(14372077-14372147)
chr2 (1-71)||(23671376-23671446)
chr2 (1-68)||(14707725-14707792)
chr2 (1-76)||(42038518-42038593)
chr2 (1-71)||(18718239-18718309)
chr2 (1-71)||(34826912-34826982)
chr2 (1-71)||(40425440-40425510)
chr2 (1-71)||(41172948-41173018)
chr2 (1-71)||(3987423-3987493)
chr2 (1-78)||(20517412-20517489)
chr2 (1-78)||(44330377-44330454)
chr2 (1-72)||(44283470-44283541)
chr2 (1-71)||(4045424-4045494)
chr2 (1-71)||(7443082-7443152)
chr2 (1-71)||(16942002-16942072)
chr2 (1-71)||(17012667-17012737)
chr2 (1-71)||(27559575-27559645)
chr2 (1-70)||(41463708-41463777)
chr2 (1-64)||(38588080-38588143)
chr2 (1-71)||(30708728-30708798)
chr2 (1-71)||(32776091-32776161)
chr2 (1-56)||(36199142-36199197)
chr2 (1-71)||(9877274-9877344)
chr2 (1-75)||(40598124-40598198)
chr2 (1-64)||(5030462-5030525)
chr2 (1-71)||(38963519-38963589)
chr2 (1-42)||(4083236-4083277)
chr2 (34-74)||(20682866-20682906)
chr2 (36-72)||(27559801-27559837)
chr2 (36-71)||(34827138-34827173)
chr2 (37-74)||(20917726-20917763)
chr2 (7-52)||(25786581-25786626)
chr2 (1-42)||(38137721-38137762)
chr2 (36-72)||(32775902-32775938)
chr2 (36-72)||(40471962-40471998)
chr2 (36-72)||(44330610-44330646)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-73)||(41408-41480)
[»] chr3 (42 HSPs)
chr3 (1-76)||(7460011-7460086)
chr3 (1-71)||(8559196-8559266)
chr3 (1-71)||(18659052-18659122)
chr3 (1-71)||(43137851-43137921)
chr3 (1-71)||(54840319-54840389)
chr3 (1-74)||(21906993-21907066)
chr3 (5-72)||(37832899-37832966)
chr3 (1-77)||(38492046-38492122)
chr3 (1-73)||(45167297-45167369)
chr3 (2-73)||(29728290-29728361)
chr3 (1-64)||(38833671-38833734)
chr3 (1-71)||(1327311-1327381)
chr3 (1-71)||(34827322-34827392)
chr3 (1-71)||(52668676-52668746)
chr3 (1-62)||(51062399-51062460)
chr3 (1-66)||(51392483-51392548)
chr3 (1-68)||(10571335-10571402)
chr3 (1-71)||(46483551-46483621)
chr3 (1-73)||(27848950-27849022)
chr3 (1-72)||(48707034-48707105)
chr3 (1-75)||(32951327-32951401)
chr3 (1-71)||(49057856-49057926)
chr3 (1-71)||(53066375-53066444)
chr3 (1-72)||(25097378-25097449)
chr3 (1-71)||(28690516-28690586)
chr3 (1-71)||(3547611-3547681)
chr3 (1-75)||(4238811-4238885)
chr3 (1-71)||(15503025-15503095)
chr3 (1-75)||(17052860-17052934)
chr3 (3-77)||(39435228-39435302)
chr3 (1-42)||(45093749-45093790)
chr3 (1-49)||(9145524-9145572)
chr3 (1-60)||(32285367-32285426)
chr3 (1-75)||(10435130-10435204)
chr3 (4-42)||(35718049-35718087)
chr3 (36-78)||(38833889-38833931)
chr3 (36-71)||(54840128-54840163)
chr3 (36-73)||(8559003-8559040)
chr3 (1-42)||(10437311-10437352)
chr3 (1-66)||(47638060-47638125)
chr3 (37-74)||(51062617-51062654)
chr3 (178-230)||(12053872-12053924)
[»] scaffold0092 (1 HSPs)
scaffold0092 (1-71)||(44299-44369)
[»] scaffold0459 (1 HSPs)
scaffold0459 (1-74)||(12749-12822)
[»] scaffold0366 (2 HSPs)
scaffold0366 (1-74)||(10390-10463)
scaffold0366 (1-74)||(14056-14129)
[»] scaffold0027 (1 HSPs)
scaffold0027 (1-72)||(117320-117391)
[»] scaffold0007 (1 HSPs)
scaffold0007 (6-74)||(15412-15480)


Alignment Details
Target: chr4 (Bit Score: 153; Significance: 5e-81; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 177 - 349
Target Start/End: Complemental strand, 6374749 - 6374577
Alignment:
Q  177 agcttggagagtaattcatgacaaaatgccaactgatgaaaagctgcagcaaaggggatactatatctcatctatgtgctctctttgtttatcaaatgtt 276  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||    
T  6374749 agcttggagagtaattcatgacaaaatgccaactgatgaaaagctgcagcaaaggggatgctatatctcatctatgtgctctctttgtttatctaatgtt 6374650  T
Q  277 gaaaactcattcgacatgttctttaaatgtaagtttgttttcatgatttggtgctggtttgcttccattcttg 349  Q
    |||||||||||| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6374649 gaaaactcattccacttgttctttgaatgtaagtttgttttcatgatttggtgctggtttgcttccattcttg 6374577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 46212541 - 46212616
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatatt 76  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||    
T  46212541 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtattatt 46212616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3901330 - 3901400
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3901330 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 3901400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 46803701 - 46803631
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  46803701 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 46803631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4264204 - 4264131
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||    
T  4264204 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattgagggacggagggagtaata 4264131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 3442535 - 3442611
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattt 77  Q
    ||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| |||||    
T  3442535 aaagataaaacatatgcattggtatgtgtgtcagagtcaactatgtcatttatttagggacggagggagtagtattt 3442611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 5735341 - 5735271
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  5735341 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 5735271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28166344 - 28166274
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  28166344 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 28166274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 45198531 - 45198601
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  45198531 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 45198601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 47579357 - 47579287
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  47579357 aaagataaaacatatgcattggtatgtgtgtaagagtcaactaggtcatttatttagggacggagggagta 47579287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6494658 - 6494586
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  6494658 aaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggaggaagtaat 6494586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5744274 - 5744344
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  5744274 aaagataaaacatatacattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 5744344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21859110 - 21859180
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  21859110 aaagataaaacatatgtattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagta 21859180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 21914973 - 21915043
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  21914973 aaagataaaacatatgtattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagta 21915043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 26205895 - 26205965
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||||||    
T  26205895 aaagataaaacatatgcattggtatgtgtgtaagagtcaactagatcatttatttagggacggagggagta 26205965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 28152057 - 28151993
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggag 69  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||    
T  28152057 ataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaaggacggagggag 28151993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 37688224 - 37688289
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagg 66  Q
    ||||||||||||||||||||||||||||||||||||||| || | |||||||||||||||||||||    
T  37688224 aaagataaaacatatgcattggtatgtgtgtcagagtcatctagatcatttatttagggacggagg 37688289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 39786547 - 39786619
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||| |||| ||||||||||||||||||    
T  39786547 aaagataaaacatatgcattgatacgtgtgtcagagtcaactaggtcatctattgagggacggagggagtaat 39786619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7739010 - 7739080
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||| || ||||||| ||||||||| ||||||||||||||||||||| ||||||    
T  7739010 aaagataaaacatatgcattgatacgtgtgtcggagtcaactaggtcatttatttagggacggatggagta 7739080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 18360164 - 18360234
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||| |||| ||||||||||||||||    
T  18360164 aaagataaaacatatgcattggtacgtgcgtcagagtcaactaggtcatctattgagggacggagggagta 18360234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 36602764 - 36602694
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||| ||||||||||||| |||||| |||| ||||||||||||||||    
T  36602764 aaagataaaacatatgcattggtacgtgcgtcagagtcaactaggtcatctattgagggacggagggagta 36602694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 55190905 - 55190975
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||||||| ||||    
T  55190905 aaagataaaacatatgcattggtaagtgtgtcagagtcaactaggtcatctattgagggacggaggaagta 55190975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 4209433 - 4209360
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||||||||||||| ||||||| ||||||||||||||||| | |||| |||| |||||||||||||||||||    
T  4209433 aaagataaaacatatgtattggtacgtgtgtcagagtcaactagatcatctattgagggacggagggagtaata 4209360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 49768515 - 49768447
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggag 69  Q
    ||||||||||||||||||||| ||||| ||||| ||||||||  |||||||||||||||||||||||||    
T  49768515 aaagataaaacatatgcattgatatgtatgtcatagtcaactaagtcatttatttagggacggagggag 49768447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 23256001 - 23255934
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||| ||||||||||||| ||||||||||||||||| |||||| |||| |||||||||||||||||    
T  23256001 ataaaatatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagtaa 23255934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5123348 - 5123418
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||| |||| ||||| ||||||||||    
T  5123348 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaagtcatctattgagggatggagggagta 5123418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 20678778 - 20678843
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagg 66  Q
    |||||||||| |||||||||| ||| |||||||||||||||| | |||||||||||||||||||||    
T  20678778 aaagataaaatatatgcattgatatatgtgtcagagtcaactagatcatttatttagggacggagg 20678843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 1377102 - 1377027
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatatt 76  Q
    ||||||||||||||||||||||||||||||||| ||||||||  |||||||||| | ||| | |||||||| ||||    
T  1377102 aaagataaaacatatgcattggtatgtgtgtcatagtcaactacgtcatttattgaaggatgaagggagtagtatt 1377027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 39195672 - 39195743
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||| |||||||||| |||||||||||||||||||| |||||| || | ||||||| |||||||||    
T  39195672 aaagataaaaaatatgcattgatatgtgtgtcagagtcaactaggtcatctaataagggacgaagggagtaa 39195743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 19525905 - 19525976
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||||||||||||| |||||||  |||||||| ||||||||| |   |||||||||||||||    
T  19525905 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcatttaatataggacggagggagtaa 19525976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19634039 - 19634109
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||| ||||||| ||||||| ||||||||| | |||| |||| ||||||| ||||||||    
T  19634039 aaagataaaacatatgaattggtacgtgtgtcggagtcaactagatcatctattaagggacgaagggagta 19634109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 25644429 - 25644355
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  ||||| |||||||||||||    
T  25644429 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacagagggagtaatat 25644355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 53568424 - 53568347
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattta 78  Q
    ||||||||||||||||||||| |||||||||| ||||||||| || |||||  |  |||||||||| ||||| |||||    
T  53568424 aaagataaaacatatgcattgatatgtgtgtcggagtcaactaggacatttgatatgggacggaggaagtaacattta 53568347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14958078 - 14958030
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcat 49  Q
    ||||||| || ||||||||||||||||||||||||||||||| ||||||    
T  14958078 aaagatataaaatatgcattggtatgtgtgtcagagtcaactaggtcat 14958030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19731356 - 19731404
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcat 49  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  19731356 aaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcat 19731404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 94 - 128
Target Start/End: Complemental strand, 6374776 - 6374742
Alignment:
Q  94 gaaaatggactgttgaaaataatgcagagcttgga 128  Q
    |||||||||||||||||||||||||||||||||||    
T  6374776 gaaaatggactgttgaaaataatgcagagcttgga 6374742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 6923131 - 6923205
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |    |||||||||||||||||    
T  6923131 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatataagacggagggagtaatat 6923205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 10181058 - 10181016
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactg 43  Q
    |||||||||||||||| ||||||||||||| ||||||||||||    
T  10181058 aaagataaaacatatgtattggtatgtgtgacagagtcaactg 10181016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19170730 - 19170800
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||| |||||||||||||  ||||||  |||||||| |||||| |||| |||||||||| |||||    
T  19170730 aaagataaaatatatgcattggtacatgtgtcgaagtcaactaggtcatctattgagggacggagcgagta 19170800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 19652446 - 19652516
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||| ||||||| || |||| ||||||||| | |||| |||| ||||||||||| ||||    
T  19652446 aaagataaaacatatgaattggtacgtatgtcggagtcaactagatcatatattgagggacggaggaagta 19652516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 50033090 - 50033020
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||| |||||||||  ||||| || |  ||||||||| |||||    
T  50033090 aaagataaaacatatgcattggtacgtgtgtcggagtcaactaagtcatctaatatgggacggagagagta 50033020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 23603838 - 23603879
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    |||||||||||| ||||||||||| |||||||||||||||||    
T  23603838 aaagataaaacagatgcattggtacgtgtgtcagagtcaact 23603879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 5744118 - 5744082
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||||||||||||||| |||||||||||||||||    
T  5744118 gtcaactgggtcatttattaagggacggagggagtaa 5744082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 51737144 - 51737184
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaac 41  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  51737144 aaagataaaacatatgcattggtacgtgtgtcggagtcaac 51737184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 3443578 - 3443617
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaa 40  Q
    |||||||||||||||||||| ||| |||||||||||||||    
T  3443578 aaagataaaacatatgcatttgtacgtgtgtcagagtcaa 3443617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 19631378 - 19631339
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaa 40  Q
    |||||||||||||||||||||||| ||||||| |||||||    
T  19631378 aaagataaaacatatgcattggtacgtgtgtcggagtcaa 19631339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 28152217 - 28152256
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  28152217 gtcaactaggtcatttattaagggacggagggagtaatat 28152256  T

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Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 50971526 - 50971491
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaa 40  Q
    |||||||||||||||||||| |||||||||||||||    
T  50971526 ataaaacatatgcattggtacgtgtgtcagagtcaa 50971491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 1377257 - 1377299
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaatattta 78  Q
    ||||||||| ||||||||| |||||| ||||||||||||||||    
T  1377257 gtcaactggatcatttattaagggacagagggagtaatattta 1377299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 175 - 221
Target Start/End: Complemental strand, 14140436 - 14140390
Alignment:
Q  175 atagcttggagagtaattcatgacaaaatgccaactgatgaaaagct 221  Q
    |||||||||||| |||| |||||||||||||| || |||||||||||    
T  14140436 atagcttggagaataatgcatgacaaaatgcctacagatgaaaagct 14140390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 39193982 - 39193940
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactg 43  Q
    |||||||||| |||||||||| ||| |||||||||||||||||    
T  39193982 aaagataaaagatatgcattgatatatgtgtcagagtcaactg 39193940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39260322 - 39260391
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||| ||||| |||||||  |||||||||||||||| | |||| |||| |||||| |||||||||    
T  39260322 aaagataaaatatatgtattggtacatgtgtcagagtcaactagatcatctattgagggac-gagggagta 39260391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 50035609 - 50035539
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||| || ||||||| ||||||||| | |||| || |  ||||||||| |||||    
T  50035609 aaagataaaacatatgcattgatacgtgtgtcggagtcaactagatcatctaatatgggacggagagagta 50035539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 42187170 - 42187211
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    |||||||||| ||||||||||||| || ||||||||||||||    
T  42187170 aaagataaaatatatgcattggtacgtatgtcagagtcaact 42187211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 55014332 - 55014291
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    |||||||||||||||||||| ||| ||||||| |||||||||    
T  55014332 aaagataaaacatatgcattagtacgtgtgtcggagtcaact 55014291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 6494816 - 6494856
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaatatt 76  Q
    ||||||||||||||||||| ||||||||| |||||| ||||    
T  6494816 gtcaactgggtcatttattaagggacggaaggagtagtatt 6494856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 44 - 72
Target Start/End: Complemental strand, 19170566 - 19170538
Alignment:
Q  44 ggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||||||||||||||||||    
T  19170566 ggtcatttatttagggacggagggagtaa 19170538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 6e-31; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 31854888 - 31854816
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  31854888 aaagataaaacatatgcattggtatgtgtatcagagtcaactgggtcatttatttagggacggagggagtaat 31854816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 643622 - 643692
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  643622 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 643692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 11114635 - 11114563
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||    
T  11114635 aaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttattgagggacggagggagtaat 11114563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 22020346 - 22020269
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattta 78  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||| ||||||    
T  22020346 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaagaacggaaggagtagtattta 22020269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 24150811 - 24150741
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||    
T  24150811 aaagataaaatatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaggaacggatggagta 24150741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 8796120 - 8796047
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    ||||||||||||||| |||||||||||||||||||||||||| | | |||||||||||||||||| ||||||||    
T  8796120 aaagataaaacatatacattggtatgtgtgtcagagtcaactagatgatttatttagggacggagtgagtaata 8796047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 29403714 - 29403638
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattt 77  Q
    |||||||||||||| |||||||||||||||||||||||||||  |||||||||| | |||||||| |||||||||||    
T  29403714 aaagataaaacatacgcattggtatgtgtgtcagagtcaactaagtcatttattaaaggacggagagagtaatattt 29403638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 18991970 - 18991904
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  18991970 ataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 18991904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 33121612 - 33121542
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| |||||||  |||||||| ||||||||||| ||||||||||||||||    
T  33121612 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcatttattaagggacggagggagta 33121542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 20662250 - 20662323
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttattt-agggacggagggagtaat 73  Q
    ||||||||||||||||||||||||||| |||||||| ||||| |||||||||||| ||||||||||| ||||||    
T  20662250 aaagataaaacatatgcattggtatgtatgtcagaggcaactaggtcatttatttgagggacggaggaagtaat 20662323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 7098064 - 7098133
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||    |||||||||||||||||||||||    
T  7098064 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatc----atttagggacggagggagtaata 7098133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 25435481 - 25435406
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattt 77  Q
    ||||||||||||||||||||||||||||||||| |||||||| | ||||||||| ||| |||||||||||| |||||    
T  25435481 aaagataaaacatatgcattggtatgtgtgtca-agtcaactagatcatttattgaggaacggagggagtattattt 25435406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 7 - 71
Target Start/End: Complemental strand, 30237229 - 30237165
Alignment:
Q  7 aaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||||||||||||    
T  30237229 aaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagta 30237165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 13207144 - 13207217
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| || |   |||||||| ||||||||    
T  13207144 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctaatgtaggacggagagagtaata 13207217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 29986349 - 29986390
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  29986349 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 29986390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 8796275 - 8796315
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaatatt 76  Q
    ||||||||||||||||||| |||||||||||||||| ||||    
T  8796275 gtcaactgggtcatttattaagggacggagggagtattatt 8796315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 16434719 - 16434791
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    |||||||| | ||||||||||||||| ||||| ||||||||| | |||| || |  |||||||||||||||||    
T  16434719 aaagataagaaatatgcattggtatgagtgtctgagtcaactagttcatctaatatgggacggagggagtaat 16434791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 643466 - 643431
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||| |||||||||||||||||||||||||||    
T  643466 gtcaactgagtcatttatttagggacggagggagta 643431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Original strand, 31855044 - 31855085
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaatattt 77  Q
    |||||||| |||||||||| |||||||||||||||| |||||    
T  31855044 gtcaactgagtcatttattaagggacggagggagtattattt 31855085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 20662094 - 20662058
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  20662094 gtcaactaggtcatttattaagggacggagggagtaa 20662058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 22020502 - 22020538
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||||||||||||| | |||||||||||||||||    
T  22020502 gtcaactgggtcatttaataagggacggagggagtaa 22020538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 25435637 - 25435673
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||||||||||||||| |||||||||| ||||||    
T  25435637 gtcaactgggtcatttattaagggacggagagagtaa 25435673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 69; Significance: 6e-31; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 48265002 - 48265074
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48265002 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtaat 48265074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 25531848 - 25531777
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25531848 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtaa 25531777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48219833 - 48219903
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  48219833 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 48219903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 32988540 - 32988611
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  32988540 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagagacggagggagtaa 32988611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 52379059 - 52378984
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatatt 76  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||    
T  52379059 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtagtatt 52378984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 39354455 - 39354525
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||    
T  39354455 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacgtagggagta 39354525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 50539330 - 50539260
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  50539330 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 50539260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 50876434 - 50876362
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    ||||||||||||||||||||||||| ||||| |||||||||| ||||||||||||||||||||||||||||||    
T  50876434 aaagataaaacatatgcattggtatatgtgttagagtcaactaggtcatttatttagggacggagggagtaat 50876362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 49805443 - 49805512
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagt 70  Q
    ||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||    
T  49805443 aaagataaaacatatgcattggtatgtttgtcagagtcaactagatcatttatttagggacggagggagt 49805512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38458799 - 38458729
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||| ||||||||||| ||||    
T  38458799 aaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttattgagggacggaggaagta 38458729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Original strand, 30529242 - 30529311
Alignment:
Q  2 aagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||||||||||||||    
T  30529242 aagataaaacatatgcattggtacttgtgtcagagtcaactaggtcatttattgagggacggagggagta 30529311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3529246 - 3529176
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| | ||||| ||| ||||||||||||||||    
T  3529246 aaagataaaacatatgcattggtacgtgtgtcagagtcaactagatcattaattaagggacggagggagta 3529176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23569865 - 23569935
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||||| ||||||||||||||||    
T  23569865 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttattgagggacggagggagta 23569935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 181 - 349
Target Start/End: Original strand, 16489728 - 16489896
Alignment:
Q  181 tggagagtaattcatgacaaaatgccaactgatgaaaagctgcagcaaaggggatactatatctcatctatgtgctctctttgtttatcaaatgttgaaa 280  Q
    |||||||| || ||||||||| | ||||| ||||||||  |||||||||| |||| | | ||||| || ||||| || ||||| ||||||||||| |||     
T  16489728 tggagagttatccatgacaaagtaccaaccgatgaaaaattgcagcaaagaggatgcaacatctcttccatgtgttcactttgcttatcaaatgtggaat 16489827  T
Q  281 actcattcgacatgttctttaaatgtaagtttgttttcatgatttggtgctggtttgcttccattcttg 349  Q
     ||| ||  |  | |||||| |||||||||||  ||||||||| ||||| ||||||||||| |||||||    
T  16489828 cctcttttcatcttttctttgaatgtaagttttctttcatgatatggtgttggtttgcttctattcttg 16489896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 32565816 - 32565746
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||| |||||||||||||||||| |||||||||||||||||  ||||| |||| | ||||||||||||||    
T  32565816 aaagagaaaacatatgcattggtacgtgtgtcagagtcaactaagtcatctattgaaggacggagggagta 32565746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 42708570 - 42708504
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||||||||||||||   ||||||||||| | ||||| ||||||    
T  42708570 ataaaacatatgcattggtatgtgtgtcagagtcaactaaatcatttatttaagaacggaaggagta 42708504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 45235036 - 45235101
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagg 66  Q
    |||||||||||||||||||||||| |||||||||||||||||  |||| ||||| || ||||||||    
T  45235036 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaagtcacttattcagagacggagg 45235101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 29161912 - 29161853
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttaggga 60  Q
    |||||||||||||||| ||||||| ||||||||||||||||| | ||||||||| |||||    
T  29161912 aaagataaaacatatgaattggtacgtgtgtcagagtcaactagatcatttattgaggga 29161853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 37281162 - 37281087
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatatt 76  Q
    |||||||||||| ||||||| |||||| |||||||||||||| |||||| |||| ||||||  |||||||| ||||    
T  37281162 aaagataaaacacatgcatttgtatgtttgtcagagtcaactaggtcatctattgagggacaaagggagtactatt 37281087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 47222284 - 47222233
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcattta 52  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||||||    
T  47222284 aaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcattta 47222233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 3898762 - 3898836
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| || ||||  |||||||| | ||||||| |  |||||||||||||||||||    
T  3898762 aaagataaaacatatgcattggtacgtctgtcgaagtcaactagatcatttaatatgggacggagggagtaatat 3898836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 4605068 - 4605002
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggaggg 67  Q
    |||||||||||||||||||||||| ||||||| ||||||||| | |||| |||  ||||||||||||    
T  4605068 aaagataaaacatatgcattggtacgtgtgtcggagtcaactagatcatctatcgagggacggaggg 4605002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16265103 - 16265029
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  | |||||||||||||||||    
T  16265103 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggagggagtaatat 16265029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16266232 - 16266158
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  |||||||||||| ||||||    
T  16266232 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggaataatat 16266158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16751644 - 16751714
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||| ||||||||| |||||| || |  || ||||||||||||    
T  16751644 aaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcatctaatatggaacggagggagta 16751714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 26441707 - 26441633
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  || ||||||||||||||||    
T  26441707 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatggaacggagggagtaatat 26441633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43680139 - 43680065
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| | |||||  |||||||| | ||||||| |  |||||||||||||||||||    
T  43680139 aaagataaaacatatgcattggtacgcgtgtcgaagtcaactagatcatttaatatgggacggagggagtaatat 43680065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38738169 - 38738217
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcat 49  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  38738169 aaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcat 38738217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 1849769 - 1849714
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttattta 56  Q
    ||||||||||||||||||||||||| ||||| |||||||||| | ||| |||||||    
T  1849769 aaagataaaacatatgcattggtatatgtgttagagtcaactagatcacttattta 1849714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 14075801 - 14075738
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggaggga 68  Q
    |||||||||||||||||||||||||||| ||||||||| | |||| || |  ||||||||||||    
T  14075801 ataaaacatatgcattggtatgtgtgtcggagtcaactcgatcatctaatatgggacggaggga 14075738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 24982417 - 24982347
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||| |||||||  |||||||| | ||||||| |  | |||||||||||||||||    
T  24982417 ataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggagggagtaatat 24982347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 48376228 - 48376158
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| |||||||| ||| |||| |||||| |||| | | || |||||||||    
T  48376228 aaagataaaacatatgcattggtacgtgtgtcaaagttaactaggtcatctattgaagaacagagggagta 48376158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 50481348 - 50481278
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||| || ||||||  ||||| || |  |||||||||||||||    
T  50481348 aaagataaaacatatgcattggtacgtgtgtcggaatcaactaagtcatctaatatgggacggagggagta 50481278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31971578 - 31971619
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    ||||||||||||||||||||||||  ||||||||||||||||    
T  31971578 aaagataaaacatatgcattggtacatgtgtcagagtcaact 31971619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 34 - 75
Target Start/End: Complemental strand, 41855566 - 41855525
Alignment:
Q  34 gagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||| |||||||||| ||||||||||||||||||||    
T  41855566 gagtcaactgtgtcatttattaagggacggagggagtaatat 41855525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 12 - 48
Target Start/End: Complemental strand, 43729804 - 43729768
Alignment:
Q  12 atatgcattggtatgtgtgtcagagtcaactgggtca 48  Q
    |||||||||||||||||||||||||||||||| ||||    
T  43729804 atatgcattggtatgtgtgtcagagtcaactgtgtca 43729768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 30529085 - 30529047
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaata 74  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  30529085 gtcaactaggtcatttattaagggacggagggagtaata 30529047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 23393456 - 23393493
Alignment:
Q  34 gagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  23393456 gagtcaactgtgtcatttattaagggacggagggagta 23393493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 31698779 - 31698820
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    |||||| ||| |||||||||| ||||||||||||||||||||    
T  31698779 aaagattaaatatatgcattgatatgtgtgtcagagtcaact 31698820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 49805287 - 49805246
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaatattt 77  Q
    ||||||||||||||||||| ||| ||||||||||||| ||||    
T  49805287 gtcaactgggtcatttattaaggaacggagggagtaacattt 49805246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 44240743 - 44240783
Alignment:
Q  34 gagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    ||||| |||| |||||||||| |||||||||||||||||||    
T  44240743 gagtccactgtgtcatttattaagggacggagggagtaata 44240783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 50876590 - 50876626
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  50876590 gtcaactaggtcatttattaagggacggagggagtaa 50876626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 3e-30; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 2805667 - 2805742
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatatt 76  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  2805667 aaagataaaacatatgcattggtatgtatgtcagagtcaactgggtcatttatttagggacggagggagtattatt 2805742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 29791012 - 29790941
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  29791012 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtaa 29790941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38845270 - 38845200
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  38845270 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 38845200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 38739727 - 38739654
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  38739727 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaaggacggagggagtaata 38739654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 45081882 - 45081810
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  45081882 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggttatttatttagggacggagggagtaat 45081810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30289994 - 30289924
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||    
T  30289994 aaagataaaacatatgcattggtatgtatgtcagagtcaactaggtcatttatttagggacggagggagta 30289924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40013721 - 40013651
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  40013721 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattaagggacggagggagta 40013651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 43066197 - 43066127
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  43066197 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggaggtagta 43066127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3293293 - 3293363
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||    
T  3293293 aaagataaaacatatgcattggtatatgtgtcagagtcaactagatcatttatttagggacggagggagta 3293363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37709969 - 37709899
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||||||    
T  37709969 aaagataaaacatatacattggtatgtgtgttagagtcaactaggtcatttatttagggacggagggagta 37709899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 13138323 - 13138399
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattt 77  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||    
T  13138323 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatttattgagggacagagggagtaacattt 13138399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30380600 - 30380530
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||| | | ||| ||||||||||||||||||||||    
T  30380600 aaagataaaacatatgcattggtatgtgtgtcagagtcaattagatcacttatttagggacggagggagta 30380530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 2 - 71
Target Start/End: Complemental strand, 2986408 - 2986339
Alignment:
Q  2 aagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| ||||| || |||||||||||||    
T  2986408 aagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttattcagagacggagggagta 2986339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 1580956 - 1581027
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||| |||||||||| || ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  1580956 aaagataaaatatatgcattgatacgtgtgtcagagtcaactaggtcatttattcagggacggagggagtaa 1581027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8351071 - 8351141
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||| ||||| ||||||||||||||||| | ||| ||||||||||||||||||||||    
T  8351071 aaagataaaacatatgcactggtacgtgtgtcagagtcaactagatcacttatttagggacggagggagta 8351141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 6470915 - 6470843
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    ||||||||||||||||||||| || ||||||||||||||||| |||||| |||| |||||||| |||||||||    
T  6470915 aaagataaaacatatgcattgatacgtgtgtcagagtcaactaggtcatatattgagggacggtgggagtaat 6470843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 23248847 - 23248779
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggag 69  Q
    ||||||||||||||||||||| ||| ||||| |||||||||| ||||||||||||| ||| ||||||||    
T  23248847 aaagataaaacatatgcattgatatatgtgttagagtcaactaggtcatttatttaaggagggagggag 23248779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 39361191 - 39361128
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||   || | ||||||||||||| |||||| |||||    
T  39361191 ataaaacatatgcattggtatgtgtgtcagagt---ctagatcatttatttaggaacggagagagta 39361128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14847280 - 14847210
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||  ||||||| || |||||| |||||| |||  ||||||| ||||||||    
T  14847280 aaagataaaacatatgcattggtgcgtgtgtcggaatcaactaggtcatctatcgagggacgtagggagta 14847210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 18809346 - 18809272
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  | |||||| | ||||||| |  |||| ||||||||||||||    
T  18809346 aaagataaaacatatgcattggtacgtgtgtcgaactcaactagatcatttaatatgggatggagggagtaatat 18809272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 886258 - 886298
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaac 41  Q
    |||||||||||||||||||||||| ||||||| ||||||||    
T  886258 aaagataaaacatatgcattggtacgtgtgtcggagtcaac 886298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 3293136 - 3293100
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||||||||||||||| |||||||||||||||||    
T  3293136 gtcaactgggtcatttattaagggacggagggagtaa 3293100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 71
Target Start/End: Complemental strand, 45253816 - 45253749
Alignment:
Q  5 ataaaacatatgcattggtatgtgt-gtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||| |||| ||| ||||||||| | |||| |||| |||||| |||||||||    
T  45253816 ataaaacatatgcattggtacgtgtcgtcggagtcaactagatcatctattaagggacagagggagta 45253749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 75
Target Start/End: Complemental strand, 11854590 - 11854520
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||| ||||||||||||| |||||||  |||||||| | || |||| |  |||||||||||||||||||    
T  11854590 ataaaatatatgcattggtacgtgtgtcgaagtcaactagatcgtttaatatgggacggagggagtaatat 11854520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 31127996 - 31128070
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  ||||||||   ||||||| |  ||||| |||| ||||||||    
T  31127996 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactaaatcatttaatatgggacagaggaagtaatat 31128070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 44123743 - 44123673
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||| || ||||||| ||||||||| | |||| || |  ||||||||| |||||    
T  44123743 aaagataaaacatatgcattgatacgtgtgtcggagtcaactagatcatctaatatgggacggagagagta 44123673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 12893601 - 12893560
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    ||||||||||||||||||||| || ||||||| |||||||||    
T  12893601 aaagataaaacatatgcattgatacgtgtgtcggagtcaact 12893560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Original strand, 23249078 - 23249115
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaat 73  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  23249078 gtcaactaggtcatttattaagggacggagggagtaat 23249115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 69
Target Start/End: Original strand, 38845833 - 38845866
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggag 69  Q
    ||||||||||||||||||| ||||||||||||||    
T  38845833 gtcaactgggtcatttattaagggacggagggag 38845866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 30380756 - 30380796
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaatatt 76  Q
    ||||||||| ||||||||| |||||||||||||||| ||||    
T  30380756 gtcaactggatcatttattaagggacggagggagtactatt 30380796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 70
Target Start/End: Original strand, 37094356 - 37094392
Alignment:
Q  34 gagtcaactgggtcatttatttagggacggagggagt 70  Q
    |||||||||| |||||||||| |||||||||||||||    
T  37094356 gagtcaactgtgtcatttattaagggacggagggagt 37094392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 42785968 - 42785920
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcat 49  Q
    |||||||||  |||||||||||||| |||||| ||||||||| ||||||    
T  42785968 aaagataaataatatgcattggtatatgtgtctgagtcaactaggtcat 42785920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 3e-30; HSPs: 42)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 23988649 - 23988578
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  23988649 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagtaa 23988578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 32334831 - 32334905
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  32334831 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacagagggagtaatat 32334905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 35448188 - 35448258
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  35448188 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 35448258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42148377 - 42148306
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||    
T  42148377 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagtaa 42148306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 29627338 - 29627268
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29627338 aaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 29627268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38698033 - 38697963
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  38698033 aaagataaaacatatgcattggtatgtgtgtcagagtcaattaggtcatttatttagggacggagggagta 38697963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40512871 - 40512941
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  40512871 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 40512941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 5364490 - 5364421
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagt 70  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  5364490 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagt 5364421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5213113 - 5213183
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  5213113 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 5213183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39894851 - 39894781
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||| |||||||||||||| | ||| ||||||||||||||||||||||    
T  39894851 aaagataaaacatatgcattggtatgtatgtcagagtcaactagatcacttatttagggacggagggagta 39894781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 37516214 - 37516143
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||| |||| |||||||||||||||||    
T  37516214 aaagataaaacatatgcattggtacgtgtgtcagagtcaactagatcatctattgagggacggagggagtaa 37516143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4925029 - 4925099
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||||| ||||||| |||||| |||| ||||||||||||||||    
T  4925029 aaagataaaacatatgcattggtacgtgtgtcagggtcaactaggtcatctattgagggacggagggagta 4925099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32002205 - 32002275
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||| |||||||||||| | | ||||||||||| ||||||||||||||    
T  32002205 aaagataaaacatatgcattggtatgtatgtcagagtcaagtagatcatttatttaaggacggagggagta 32002275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 35290356 - 35290286
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||| ||||||||||||| ||||||||||||||||| |||||| |||| ||||||||||||||||    
T  35290356 aaagataaaatatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggagggagta 35290286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 30779936 - 30780013
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattta 78  Q
    |||||||||||||||| ||||||| ||||||| ||||||||| |||||| |||| ||| |||||||||||||||||||    
T  30779936 aaagataaaacatatgtattggtacgtgtgtcggagtcaactaggtcatctattgaggaacggagggagtaatattta 30780013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 5 - 77
Target Start/End: Original strand, 37843770 - 37843842
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattt 77  Q
    |||||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||| || ||||| |||||    
T  37843770 ataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacgaagagagtattattt 37843842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 39036480 - 39036410
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||| |||||||| |||||||||||||||||  ||||| |||| || |||||||||||||    
T  39036480 aaagataaaacatatacattggtacgtgtgtcagagtcaactatgtcatctattgagagacggagggagta 39036410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41411349 - 41411419
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| |||||||  ||||||||  ||||| |||| ||||||||||||||||    
T  41411349 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactaagtcatctattgagggacggagggagta 41411419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 1830724 - 1830653
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||||||||||||||||||||  ||||||  ||||||||  ||||| |||| |||||||||||||||||    
T  1830724 aaagataaaacatatgcattggtacatgtgtcgaagtcaactaagtcatctattgagggacggagggagtaa 1830653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 14475425 - 14475488
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacgga 64  Q
    |||||||||||||||||||| ||| ||||||| ||||||||| |||||| |||| |||||||||    
T  14475425 aaagataaaacatatgcatttgtacgtgtgtcggagtcaactaggtcatctattaagggacgga 14475488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 12 - 71
Target Start/End: Complemental strand, 16954749 - 16954690
Alignment:
Q  12 atatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||| |||||||||||||||||  ||||| |||| ||||||||||||||||    
T  16954749 atatgcattggtacgtgtgtcagagtcaactaagtcatctattgagggacggagggagta 16954690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 43517251 - 43517314
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacgga 64  Q
    |||||||||||||||||||| ||| ||||||||||||||||| |||||| |||| |||| ||||    
T  43517251 aaagataaaacatatgcattagtacgtgtgtcagagtcaactaggtcatctattgaggggcgga 43517314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 970208 - 970134
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  | |||||||||||||||||    
T  970208 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggagggagtaatat 970134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 39405834 - 39405760
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||| ||  |||||||| | ||||||| |  |||||||||||||||||||    
T  39405834 aaagataaaacatatgcattggtacgtgtctcgaagtcaactagatcatttaatatgggacggagggagtaatat 39405760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 40316191 - 40316121
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||  ||||||  ||||||||  ||||| |||| ||||||||||||||||    
T  40316191 aaagataaaacatatgcattggtacatgtgtcgaagtcaactaagtcatctattgagggacggagggagta 40316121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 43067299 - 43067225
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  |||||||||| ||||||||    
T  43067299 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggaggaagtaatat 43067225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 181 - 349
Target Start/End: Original strand, 28716096 - 28716264
Alignment:
Q  181 tggagagtaattcatgacaaaatgccaactgatgaaaagctgcagcaaaggggatactatatctcatctatgtgctctctttgtttatcaaatgttgaaa 280  Q
    |||||||| || ||||||||| | ||||| ||||||||  |||||||||| |||| | | ||||| || ||||| || ||||| ||||||||||  |||     
T  28716096 tggagagttatccatgacaaagtaccaaccgatgaaaaattgcagcaaagaggatgcaacatctcttccatgtgttcactttgcttatcaaatggggaat 28716195  T
Q  281 actcattcgacatgttctttaaatgtaagtttgttttcatgatttggtgctggtttgcttccattcttg 349  Q
     ||  ||  |  | |||||| |||||||||||  ||||||||| ||||| ||||||||||| |||||||    
T  28716196 cctattttcatcttttctttgaatgtaagttttctttcatgatatggtgttggtttgcttctattcttg 28716264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 29627494 - 29627529
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||||||||||||    
T  29627494 gtcaactgggtcatttatttagggacggagggagta 29627529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4300023 - 4300097
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  | |||||||| ||||||||    
T  4300023 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggaggaagtaatat 4300097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 16048153 - 16048079
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||  |  ||||||||| |||||||||    
T  16048153 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttgatatgggacggagagagtaatat 16048079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 22613900 - 22613974
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | |||||||    |||||| ||||||||||||    
T  22613900 aaagataaaacatatgcattggtacgtgtgtctaagtcaactagatcatttaacatgggacgaagggagtaatat 22613974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 19868876 - 19868917
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    |||||||||||||||||||||||| ||||||| |||||||||    
T  19868876 aaagataaaacatatgcattggtacgtgtgtcggagtcaact 19868917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 32002049 - 32002014
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||| ||||||||||||||||    
T  32002049 gtcaactgggtcatttattaagggacggagggagta 32002014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 32300640 - 32300589
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcattta 52  Q
    |||||||||| |||||||||| ||| |||| |||||||||||| ||||||||    
T  32300640 aaagataaaaaatatgcattgatatttgtgacagagtcaactgtgtcattta 32300589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 32334673 - 32334638
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||| ||||||||||||||||    
T  32334673 gtcaactgggtcatttattaagggacggagggagta 32334638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 39895007 - 39895042
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||| ||||||||||||||||    
T  39895007 gtcaactgggtcatttattaagggacggagggagta 39895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Original strand, 5364650 - 5364688
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaata 74  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  5364650 gtcaactgggtcatttattaagggacggagagagtaata 5364688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 19889724 - 19889678
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtc 47  Q
    |||||||||||||||||||||||| |||| || ||||||||| ||||    
T  19889724 aaagataaaacatatgcattggtacgtgtatcggagtcaactaggtc 19889678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 21961297 - 21961255
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactg 43  Q
    |||||||||||||||| |||| |||||||| ||||||||||||    
T  21961297 aaagataaaacatatgaattgatatgtgtgacagagtcaactg 21961255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 34 - 71
Target Start/End: Original strand, 27675764 - 27675801
Alignment:
Q  34 gagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||| |||||||||| ||||||||||||||||    
T  27675764 gagtcaactgtgtcatttattaagggacggagggagta 27675801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 71
Target Start/End: Original strand, 37304361 - 37304406
Alignment:
Q  26 gtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||| |||||||||||| ||||| ||||| ||||||||||||||||    
T  37304361 gtgtatcagagtcaactaggtcacttattcagggacggagggagta 37304406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 42421755 - 42421714
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    ||||||||||||||||||| |||| ||||||| |||||||||    
T  42421755 aaagataaaacatatgcataggtacgtgtgtcggagtcaact 42421714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 67; Significance: 1e-29; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 36819766 - 36819696
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36819766 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 36819696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 19072839 - 19072766
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    ||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||    
T  19072839 aaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttatttagggacggagggagtaata 19072766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 47081050 - 47080979
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||    
T  47081050 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcattcatttagggacggagggagtaa 47080979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 2400355 - 2400285
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||    
T  2400355 aaagataaaacatatgcattggtatatgtgtcagagtcaactaggtcatttatttagggacggagggagta 2400285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28185599 - 28185669
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  28185599 aaagataaaacatatgtattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 28185669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42086829 - 42086899
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  42086829 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggatggagggagta 42086899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 47713693 - 47713763
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  47713693 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 47713763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 31466549 - 31466619
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||    
T  31466549 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 31466619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 37951136 - 37951206
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||||||||||||||    
T  37951136 aaagataaaacatatgcattggtatgtgcgtcagagtcaactaggtcatttatttatggacggagggagta 37951206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44479911 - 44479981
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||    
T  44479911 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggaggaagta 44479981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 47713774 - 47713840
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  47713774 ataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagta 47713840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 36905596 - 36905524
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    |||||||||||||||| |||||||||||||||||||||||||   ||||||||||||||||||||||||||||    
T  36905596 aaagataaaacatatgtattggtatgtgtgtcagagtcaactaaatcatttatttagggacggagggagtaat 36905524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 4612282 - 4612348
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||    
T  4612282 ataaaatatatgcattggtatttgtgtcagagtcaactgggtcatttatttagggacgtagggagta 4612348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 5 - 71
Target Start/End: Original strand, 32619137 - 32619203
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||||||||||    
T  32619137 ataaaacatatgcattgatatgtgtgtcagagtcaactaagtcatttatttagggacggagggagta 32619203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 36859399 - 36859469
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||||||| |||||||| | ||||||||||||||| ||||||||||||    
T  36859399 aaagataaaacatatgcattggtatgtgtgttagagtcaattaggtcatttatttaggaacggagggagta 36859469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 23474160 - 23474230
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||| || ||||||||||||||||| ||||| ||||||||||||||| ||||||    
T  23474160 aaagataaaacatatgcattgatacgtgtgtcagagtcaactaggtcacttatttagggacggaaggagta 23474230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 70
Target Start/End: Complemental strand, 31110692 - 31110625
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagt 70  Q
    |||||||||||||||||||||  ||||||  ||||||||||| |||||||||||||||||||||||||||    
T  31110692 aaagataaaacatatgcattgagatgtgt--cagagtcaactaggtcatttatttagggacggagggagt 31110625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 42834483 - 42834553
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||| ||||||||||||| ||| |||||| | |||||||||||||| |||||||||||||    
T  42834483 aaagataaaacatatacattggtatgtgtatcaaagtcaaataggtcatttatttagagacggagggagta 42834553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 10464306 - 10464380
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||| ||||||||   ||||||| |  |||||||||||||||||||    
T  10464306 aaagataaaacatatgcattggtacgtgtgtcaaagtcaactatatcatttaatatgggacggagggagtaatat 10464380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 21392088 - 21392018
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| | |||| |||| | |||| |||||||||    
T  21392088 aaagataaaacatatgcattggtacgtgtgtcagagtcaactagatcatctattgaaggacagagggagta 21392018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 37231755 - 37231829
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  |||||||||||||||||||    
T  37231755 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggagtaatat 37231829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 34478202 - 34478272
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| |||||||  |||||||| ||| ||||| |  |||||||||||||||    
T  34478202 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggttatttaatatgggacggagggagta 34478272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 35500938 - 35501012
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  ||| |||| | ||||||| |  |||||||||||||||||||    
T  35500938 aaagataaaacatatgcattggtacgtgtgtcgaagttaactagatcatttaatatgggacggagggagtaatat 35501012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 42493821 - 42493894
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||||||| |||| ||||| |||||||| |||||||||||| |||||||| |  ||||| ||||||||||||    
T  42493821 aaagataaaaaatatacattgatatgtgtgacagagtcaactgtgtcatttaatatgggacagagggagtaata 42493894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4033361 - 4033297
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggag 65  Q
    |||||||||| |||||||||| |||||||||||||||||||| | |||| || | ||||||||||    
T  4033361 aaagataaaaaatatgcattgatatgtgtgtcagagtcaactagatcatctaataagggacggag 4033297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 36905752 - 36905787
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||||||||||||    
T  36905752 gtcaactgggtcatttatttagggacggagggagta 36905787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 34478043 - 34478002
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaatattt 77  Q
    ||||||| ||||||||||| ||||||||||||||||||||||    
T  34478043 gtcaactaggtcatttattgagggacggagggagtaatattt 34478002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33613286 - 33613238
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcat 49  Q
    |||| ||||||||||||||||||||| ||||| ||||||||| ||||||    
T  33613286 aaagttaaaacatatgcattggtatgcgtgtcggagtcaactaggtcat 33613238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38198551 - 38198503
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcat 49  Q
    |||||||||| |||||||||| ||||||| |||||||||||| ||||||    
T  38198551 aaagataaaaaatatgcattgatatgtgtatcagagtcaactaggtcat 38198503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 4612122 - 4612087
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||| ||||||||||||||||    
T  4612122 gtcaactgggtcatttattaagggacggagggagta 4612087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 19072995 - 19073030
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19072995 gtcaactgggtcatttattaagggacggagggagta 19073030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 31110851 - 31110886
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||| ||||||||||||||||||||||||||    
T  31110851 gtcaactggatcatttatttagggacggagggagta 31110886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 31497894 - 31497965
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||||| ||| ||||||||||| ||||||||| ||| || || |  ||||| ||||||||||    
T  31497894 aaagataaaacatatgtattagtatgtgtgtcggagtcaactaggttatctaatatgggaccgagggagtaa 31497965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 36819922 - 36819961
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    ||||||| ||||||||||| ||||||||||||||||||||    
T  36819922 gtcaactaggtcatttattaagggacggagggagtaatat 36819961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 31466393 - 31466355
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaata 74  Q
    ||||||| ||||||||||| |||||||||||||||||||    
T  31466393 gtcaactaggtcatttattaagggacggagggagtaata 31466355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 36643232 - 36643158
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||| | | ||||||| |  |||||| ||| ||||||||    
T  36643232 aaagataaaacatatgcattggtacgtgtgtcgaagtcaattagatcatttaatatgggacgaaggaagtaatat 36643158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 47841253 - 47841291
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtca 39  Q
    |||||||||| |||||||||||||| |||||||||||||    
T  47841253 aaagataaaaaatatgcattggtatatgtgtcagagtca 47841291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 48531392 - 48531326
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggaggg 67  Q
    |||||||||| |||||||||| || |||||||||||||||||   |||| |||| ||| ||||||||    
T  48531392 aaagataaaatatatgcattgatacgtgtgtcagagtcaactaaatcatctattgaggaacggaggg 48531326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 47537993 - 47537932
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacg 62  Q
    |||||||||||||||||||||||| || | ||||| |||| | | ||||||||| |||||||    
T  47537993 aaagataaaacatatgcattggtacgtatatcagaatcaattagatcatttattgagggacg 47537932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 14372147 - 14372077
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  14372147 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 14372077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 23671446 - 23671376
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23671446 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 23671376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 14707725 - 14707792
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggaggga 68  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14707725 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggaggga 14707792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 42038593 - 42038518
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatatt 76  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||    
T  42038593 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagtattatt 42038518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18718309 - 18718239
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  18718309 aaagataaaacatatgcattgatatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 18718239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34826982 - 34826912
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  34826982 aaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcatttatttagggacggagggagta 34826912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 40425440 - 40425510
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||    
T  40425440 aaagataaaacatatgcattggtatgtgtgtcagaatcaactaggtcatttatttagggacggagggagta 40425510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 41172948 - 41173018
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  41172948 aaagataaaacatatgcattggtatgtgtgtcagagtcaagtaggtcatttatttagggacggagggagta 41173018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3987423 - 3987493
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||| ||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  3987423 aaagataaaacatatgtattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 3987493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 20517489 - 20517412
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattta 78  Q
    |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||| ||||||||||||| ||||||    
T  20517489 aaagataaaacatatgcattggtatgtgtgtcagagtcaattatgtcatttatttagagacggagggagtattattta 20517412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 44330454 - 44330377
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattta 78  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||| |||||| ||||||    
T  44330454 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaagaacggaaggagtagtattta 44330377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 44283470 - 44283541
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||| |||||||||||||||    
T  44283470 aaagataaaatatatgcattggtatgtgtgtcagaatcaactaggtcatttatttaaggacggagggagtaa 44283541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4045424 - 4045494
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||||||||||||    
T  4045424 aaagataaaacatatgcattggtatgtgtgtcagagtcaaccaaatcatttatttagggacggagggagta 4045494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 7443082 - 7443152
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  7443082 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 7443152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 16942002 - 16942072
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||| ||||    
T  16942002 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagcgacggaggaagta 16942072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 17012667 - 17012737
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||| ||||    
T  17012667 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagcgacggaggaagta 17012737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 27559645 - 27559575
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||| ||||| |||||||||||||||||||| | ||||||||||||||||||||||||||    
T  27559645 aaagataaaacatatacattgatatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 27559575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 41463708 - 41463777
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagt 70  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||||||    
T  41463708 aaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcatttattgagggacggagggagt 41463777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 38588080 - 38588143
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacgga 64  Q
    ||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||||    
T  38588080 aaagataaaacatatgcattggtatgtgtatcagagtcaactagatcatttatttagggacgga 38588143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 30708798 - 30708728
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| |||||||| |||||||| ||||| ||||| || |||||||||||||    
T  30708798 aaagataaaacatatgcattggtacgtgtgtcaaagtcaactaggtcacttattcagagacggagggagta 30708728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32776091 - 32776161
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| |||| || ||||||||| |||||| |||| ||||||||||||||||    
T  32776091 aaagataaaacatatgcattggtacgtgtatcggagtcaactaggtcatctattaagggacggagggagta 32776161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Original strand, 36199142 - 36199197
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttattta 56  Q
    |||||||||||||||||||| ||||||||||||||||||||| | |||||||||||    
T  36199142 aaagataaaacatatgcattagtatgtgtgtcagagtcaactagatcatttattta 36199197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9877274 - 9877344
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||   | ||||||||||||||||| |||||| |||| ||||||||||||||||    
T  9877274 aaagataaaacatatgcattcacacgtgtgtcagagtcaactaggtcatctattgagggacggagggagta 9877344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 40598198 - 40598124
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  |||||||||||||||||||    
T  40598198 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggagggagtaatat 40598124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 64
Target Start/End: Original strand, 5030462 - 5030525
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacgga 64  Q
    |||||||||| |||||||||||||||||||||| |||||||| |||||| |||| | |||||||    
T  5030462 aaagataaaaaatatgcattggtatgtgtgtcaaagtcaactaggtcatctattaacggacgga 5030525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 38963589 - 38963519
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| |||||||  ||| |||| |||||| |||| ||| ||||||||||||    
T  38963589 aaagataaaacatatgcattggtacgtgtgtcgaagttaactaggtcatctattaaggaacggagggagta 38963519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 4083277 - 4083236
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    ||||||||||||||||||||| |||||||||| |||||||||    
T  4083277 aaagataaaacatatgcattgatatgtgtgtcggagtcaact 4083236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 34 - 74
Target Start/End: Original strand, 20682866 - 20682906
Alignment:
Q  34 gagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  20682866 gagtcaactgtgtcatttattaagggacggagggagtaata 20682906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 27559801 - 27559837
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||||||||||||||| |||||||||||||||||    
T  27559801 gtcaactgggtcatttattaagggacggagggagtaa 27559837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 71
Target Start/End: Original strand, 34827138 - 34827173
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||| ||||||||||||||||    
T  34827138 gtcaactgggtcatttattaagggacggagggagta 34827173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Complemental strand, 20917763 - 20917726
Alignment:
Q  37 tcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||| ||||||||||| |||||||||||||||||||    
T  20917763 tcaactaggtcatttattaagggacggagggagtaata 20917726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 25786626 - 25786581
Alignment:
Q  7 aaaacatatgcattggtatgtgtgtcagagtcaactgggtcattta 52  Q
    |||| ||||||||||||||||| | |||||||||||| ||||||||    
T  25786626 aaaaaatatgcattggtatgtgggacagagtcaactgtgtcattta 25786581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 38137721 - 38137762
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    |||||||||||||||||||| ||| ||||||| |||||||||    
T  38137721 aaagataaaacatatgcatttgtacgtgtgtcggagtcaact 38137762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 32775938 - 32775902
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||| |||| |||||||||||||||||    
T  32775938 gtcaactgggtcatctattgagggacggagggagtaa 32775902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 40471962 - 40471998
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||| |||||||||| |||||||||||||||||    
T  40471962 gtcaactgtgtcatttattaagggacggagggagtaa 40471998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 44330610 - 44330646
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||||||||||||| | |||||||||||||||||    
T  44330610 gtcaactgggtcatttaataagggacggagggagtaa 44330646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 41408 - 41480
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  41408 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttattgagggacggagggagtaat 41480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 64; Significance: 6e-28; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 7460011 - 7460086
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatatt 76  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||| ||||    
T  7460011 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggaggaagtagtatt 7460086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 8559196 - 8559266
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  8559196 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggacggatggagta 8559266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 18659122 - 18659052
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  18659122 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 18659052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 43137921 - 43137851
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||    
T  43137921 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttatttagggacggagggagta 43137851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 54840319 - 54840389
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  54840319 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttagggatggagggagta 54840389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 21907066 - 21906993
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||| |||||||||||||||||||    
T  21907066 aaagataaaacatatgcattggtatgtgtgtcagagtcaactagatcatttattgagggacggagggagtaata 21906993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 5 - 72
Target Start/End: Complemental strand, 37832966 - 37832899
Alignment:
Q  5 ataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  37832966 ataaaacatatgcattggtatgtgtgtcagagtcaactatgtcatttatttagggacggagggagtaa 37832899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 77
Target Start/End: Complemental strand, 38492122 - 38492046
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattt 77  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  38492122 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagtactattt 38492046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 45167369 - 45167297
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| | ||||| ||||||||    
T  45167369 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcatttatttaagaacggatggagtaat 45167297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 2 - 73
Target Start/End: Original strand, 29728290 - 29728361
Alignment:
Q  2 aagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    |||||||||||||||||||||||  |||||||||||||||| ||||||||||| ||||||||||||||||||    
T  29728290 aagataaaacatatgcattggtacttgtgtcagagtcaactaggtcatttattgagggacggagggagtaat 29728361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 38833734 - 38833671
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacgga 64  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  38833734 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacgga 38833671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 1327381 - 1327311
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||||||||| ||| |||||||||| | ||||||||||||||||||||||||||    
T  1327381 aaagataaaacatatgcattggtatgtatgtaagagtcaactagatcatttatttagggacggagggagta 1327311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 34827392 - 34827322
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||    
T  34827392 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcacttattcagggacggagggagta 34827322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 52668676 - 52668746
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||| |||||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  52668676 aaagataaaatatatgcattgatatgtgtgtcagagccaactaggtcatttatttagggacggagggagta 52668746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 62
Target Start/End: Complemental strand, 51062460 - 51062399
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacg 62  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  51062460 aaagataaaacatatgcattggtatgtgtgtcagagtcaactaggtcacttatttagggacg 51062399  T

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Target: chr3; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 51392483 - 51392548
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagg 66  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||| ||||    
T  51392483 aaagataaaacatatgcattggtatgtgtgtaagagtcaactaggtcatttatttagggacagagg 51392548  T

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Target: chr3; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 10571335 - 10571402
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggaggga 68  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||||||||||  |||||||||||||    
T  10571335 aaagataaaacatatgtattggtatgtgtgtcagagtcaactaggtcatttatcgagggacggaggga 10571402  T

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Target: chr3; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 46483621 - 46483551
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||||||||||||| |||||| |||| ||||||||| ||||||    
T  46483621 aaagataaaacatatgcattggtacgtgtgtcagagtcaactaggtcatctattgagggacggatggagta 46483551  T

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Target: chr3; HSP #19
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 27849022 - 27848950
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaat 73  Q
    ||||||||||||||||||||||||||| ||||| |||||||| |||||| || | ||||||||||||||||||    
T  27849022 aaagataaaacatatgcattggtatgtatgtcaaagtcaactaggtcatctaatgagggacggagggagtaat 27848950  T

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Target: chr3; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 48707034 - 48707105
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||||||||||||||||||||||| ||||||| ||||||   ||| |||||||||||||||||||||||    
T  48707034 aaagataaaacatatgcattggtatgtatgtcagaatcaactaaatcacttatttagggacggagggagtaa 48707105  T

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Target: chr3; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 32951327 - 32951401
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    ||||||||||||||||||||||||||||||||  |||||||| | ||||||| |  |||||||||||||||||||    
T  32951327 aaagataaaacatatgcattggtatgtgtgtcgaagtcaactagatcatttaatatgggacggagggagtaatat 32951401  T

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Target: chr3; HSP #22
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 49057926 - 49057856
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| |||||||  |||||||| ||||||||||| ||||||||||| ||||    
T  49057926 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactaggtcatttattgagggacggaggaagta 49057856  T

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Target: chr3; HSP #23
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 53066444 - 53066375
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| |||||||||||||||||  ||||| |||| ||||||||||||||||    
T  53066444 aaagataaaacatatgcattggtaagtgtgtcagagtcaact-agtcatctattgagggacggagggagta 53066375  T

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Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 25097378 - 25097449
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    |||||||||||||||||||||||| |||||| ||||||||||  ||||| |||| ||| |||||||||||||    
T  25097378 aaagataaaacatatgcattggtacgtgtgttagagtcaactaagtcatctattgaggtacggagggagtaa 25097449  T

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Target: chr3; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 28690586 - 28690516
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||||||||| ||||||||| |||||| || |  | |||||||||||||    
T  28690586 aaagataaaacatatgcattggtatgtgtgtcggagtcaactaggtcatctaatatgtgacggagggagta 28690516  T

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Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3547611 - 3547681
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||| ||||||| ||||||| | |||||| || |  |||||||||||||||    
T  3547611 aaagataaaacatatgcattggtacgtgtgtcggagtcaattaggtcatctaatatgggacggagggagta 3547681  T

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Target: chr3; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4238811 - 4238885
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  || ||||||||||||||||    
T  4238811 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatggaacggagggagtaatat 4238885  T

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Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 15503095 - 15503025
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||||| || || |||| ||||||| | |||||| |||| ||||||||||||||||    
T  15503095 aaagataaaacatatgcattgatacgtatgtcggagtcaattaggtcatctattgagggacggagggagta 15503025  T

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Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 17052934 - 17052860
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  | |||||||||||||||||    
T  17052934 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgagacggagggagtaatat 17052860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 3 - 77
Target Start/End: Original strand, 39435228 - 39435302
Alignment:
Q  3 agataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatattt 77  Q
    |||||||| ||||| |||||||| ||||||||| |||||| |||||| || | ||||||||||||||||| ||||    
T  39435228 agataaaaaatatgtattggtatatgtgtcagaatcaactaggtcatctaataagggacggagggagtaaaattt 39435302  T

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Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 45093790 - 45093749
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    |||||||||||||||||||||||| |||||||||||||||||    
T  45093790 aaagataaaacatatgcattggtacgtgtgtcagagtcaact 45093749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9145572 - 9145524
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcat 49  Q
    |||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  9145572 aaagataaaacatatgcattggtacgtgtgtcggagtcaactaggtcat 9145524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 32285367 - 32285426
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttaggga 60  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |||| | |||| |||||    
T  32285367 aaagataaaacatatgtattggtacgtgtgtcagagtcaactaggtcgtctattgaggga 32285426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 10435204 - 10435130
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaatat 75  Q
    |||||||||||||||||||||||| |||||||  |||||||| | ||||||| |  ||||||||  |||||||||    
T  10435204 aaagataaaacatatgcattggtacgtgtgtcgaagtcaactagatcatttaatatgggacggatagagtaatat 10435130  T

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Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 42
Target Start/End: Original strand, 35718049 - 35718087
Alignment:
Q  4 gataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  35718049 gataaaacatatgcattggtacgtgtgtcagagtcaact 35718087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 38833889 - 38833931
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaatattta 78  Q
    ||||||||||||||||||| |||||||||||||||| ||||||    
T  38833889 gtcaactgggtcatttattaagggacggagggagtattattta 38833931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 71
Target Start/End: Complemental strand, 54840163 - 54840128
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagta 71  Q
    ||||||||||||||||||| ||||||||||||||||    
T  54840163 gtcaactgggtcatttattaagggacggagggagta 54840128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 73
Target Start/End: Complemental strand, 8559040 - 8559003
Alignment:
Q  36 gtcaactgggtcatttatttagggacggagggagtaat 73  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  8559040 gtcaactaggtcatttattaagggacggagggagtaat 8559003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10437352 - 10437311
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaact 42  Q
    |||||||||||||||  ||||||| |||||||||||||||||    
T  10437352 aaagataaaacatataaattggtacgtgtgtcagagtcaact 10437311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 47638125 - 47638060
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagg 66  Q
    |||||||||||||||||||||||| |||| ||||| |||| |  ||||| |||| || ||||||||    
T  47638125 aaagataaaacatatgcattggtacgtgtatcagaatcaattaagtcatctattgagtgacggagg 47638060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 74
Target Start/End: Original strand, 51062617 - 51062654
Alignment:
Q  37 tcaactgggtcatttatttagggacggagggagtaata 74  Q
    ||||||| |||||||||| |||||||||||||||||||    
T  51062617 tcaactgagtcatttattaagggacggagggagtaata 51062654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 178 - 230
Target Start/End: Complemental strand, 12053924 - 12053872
Alignment:
Q  178 gcttggagagtaattcatgacaaaatgccaactgatgaaaagctgcagcaaag 230  Q
    ||||||||| || |||||||||||||||| | |||||| |||||| |||||||    
T  12053924 gcttggagattacttcatgacaaaatgcctattgatgataagctgaagcaaag 12053872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 44299 - 44369
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagta 71  Q
    |||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  44299 aaagataaaacatatgcattggtatgcgtgtcagagtcaactaggtcatttatttagggacggagggagta 44369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 12822 - 12749
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  12822 aaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagtaata 12749  T

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Target: scaffold0366 (Bit Score: 62; Significance: 1e-26; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 10463 - 10390
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||||||||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||    
T  10463 aaagataaaacatatgcattagtatgtgtgtcagagtcaactaggtcacttatttagggacggagggagtaata 10390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 14129 - 14056
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||||||||||||||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||||||||    
T  14129 aaagataaaacatatgcattggtacgtgtatcagagtcaactaggtcacttatttagggacggagggagtaata 14056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 117391 - 117320
Alignment:
Q  1 aaagataaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaa 72  Q
    ||||||||||||||||||||| |||||||||||||||||||| | |||||||||||||||||||||||||||    
T  117391 aaagataaaacatatgcattgatatgtgtgtcagagtcaactagatcatttatttagggacggagggagtaa 117320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 15412 - 15480
Alignment:
Q  6 taaaacatatgcattggtatgtgtgtcagagtcaactgggtcatttatttagggacggagggagtaata 74  Q
    |||| |||||||||||||| |||||| |||||||||| ||||| ||||| |||||| ||||||||||||    
T  15412 taaatcatatgcattggtacgtgtgttagagtcaactaggtcagttattcagggaccgagggagtaata 15480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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