View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8005_high_2 (Length: 517)

Name: NF8005_high_2
Description: NF8005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8005_high_2
NF8005_high_2
[»] chr1 (3 HSPs)
chr1 (150-499)||(51844842-51845191)
chr1 (14-150)||(51845253-51845389)
chr1 (419-499)||(14114300-14114380)
[»] chr4 (6 HSPs)
chr4 (326-499)||(5576966-5577139)
chr4 (419-499)||(4853067-4853147)
chr4 (419-499)||(1506609-1506689)
chr4 (419-499)||(13713743-13713823)
chr4 (420-499)||(14190985-14191064)
chr4 (419-499)||(2894100-2894180)
[»] chr8 (2 HSPs)
chr8 (326-481)||(20809822-20809977)
chr8 (419-499)||(5558445-5558525)
[»] chr7 (4 HSPs)
chr7 (324-499)||(19803601-19803776)
chr7 (419-499)||(4341773-4341853)
chr7 (419-499)||(42785453-42785533)
chr7 (424-499)||(21958048-21958123)
[»] chr6 (10 HSPs)
chr6 (326-499)||(34254913-34255086)
chr6 (325-470)||(28146264-28146408)
chr6 (419-499)||(26619930-26620010)
chr6 (419-499)||(26725843-26725923)
chr6 (419-499)||(5249516-5249596)
chr6 (419-499)||(8520272-8520352)
chr6 (419-499)||(29934100-29934180)
chr6 (419-499)||(33295684-33295764)
chr6 (432-499)||(28223134-28223201)
chr6 (419-469)||(5130527-5130577)
[»] chr3 (3 HSPs)
chr3 (326-499)||(14530048-14530221)
chr3 (364-432)||(19451779-19451851)
chr3 (320-355)||(19451844-19451879)
[»] scaffold0158 (1 HSPs)
scaffold0158 (324-499)||(26164-26339)
[»] scaffold0060 (1 HSPs)
scaffold0060 (303-402)||(39601-39699)
[»] chr5 (2 HSPs)
chr5 (419-499)||(37368425-37368505)
chr5 (419-499)||(41529067-41529147)
[»] scaffold0038 (1 HSPs)
scaffold0038 (432-499)||(23632-23699)
[»] chr2 (1 HSPs)
chr2 (419-499)||(2742872-2742952)


Alignment Details
Target: chr1 (Bit Score: 342; Significance: 0; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 342; E-Value: 0
Query Start/End: Original strand, 150 - 499
Target Start/End: Complemental strand, 51845191 - 51844842
Alignment:
Q  150 attgctcaaccgcccctctttctctcattttccaagttcatcatctttcctccaattccatggaaatcatcaagtaaacttgtttatggaatacccatga 249  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  51845191 attgctcaaccgcccctctttctctcattttccaagttcataatctttcctccaattccatggaaatcatcaagtaaacttgtttttggaatacccatga 51845092  T
Q  250 tggatagctactaggttgtgggtgattatggtaatgacttgttttgatgcttgaggagcttaggaatcatcattcaaggttaattacggaagccctcatg 349  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51845091 tggatagctactaggttgtgggtgattatggtaatgacttgttttgatgcttgaggagcttaggaatcatcattcaaggttaattacggaagccctcatg 51844992  T
Q  350 gttgagcgtgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatgttattttaaaggattaaaggtgagttcctttagcttagaacccacct 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51844991 gttgagcgtgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatgttattttaaaggattaaaggtgagttcctttagcttagaacccacct 51844892  T
Q  450 ttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51844891 ttggggatcaattatgattatattagattattgagataacatgaataatt 51844842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 14 - 150
Target Start/End: Complemental strand, 51845389 - 51845253
Alignment:
Q  14 acattattctactcacttctctctctaggttaacaatttttctcctccctttctctagaattcggccctcacccacccaaaatcctaacttcatcaaatt 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  51845389 acattattctactcacttctctctctaggttaacaatttttctcctccctttctctagaattcgcccctcacccacccaaaatcctaacttcatcaaatt 51845290  T
Q  114 cacaattcatcatggaatcatcatggtacatgcttta 150  Q
    |||||||||||||||||||||||||||||||||||||    
T  51845289 cacaattcatcatggaatcatcatggtacatgcttta 51845253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 14114300 - 14114380
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||    
T  14114300 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatgttagattattgagataacatgaacaatt 14114380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 3e-74; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 326 - 499
Target Start/End: Original strand, 5576966 - 5577139
Alignment:
Q  326 aggttaattacggaagccctcatggttgagcgtgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatgttattttaaaggattaaaggtga 425  Q
    |||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  5576966 aggttaattatggatgcccttatggttgagcgtgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatgccattttaaaggattaaaggtga 5577065  T
Q  426 gttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  5577066 gttcctttagcttagaatccacctttggggatcaattatgattatgttagattattgacataacatgaataatt 5577139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 4853147 - 4853067
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  4853147 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatgttagattattgagataacatgaataatt 4853067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 1506689 - 1506609
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  1506689 aaggtgagttcctttagcttagaacccacctttggggatcaattataattatgttagattattgagataacatgaataatt 1506609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 13713823 - 13713743
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    ||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  13713823 aaggtgagttcctttcgcttataacccacctttggggatcaattatgattatgttagattattgagataatatgaataatt 13713743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 420 - 499
Target Start/End: Complemental strand, 14191064 - 14190985
Alignment:
Q  420 aggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||| |||| |||||||||||  |||||||||||||||||||||||||||    
T  14191064 aggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctagattattgagataacatgaataatt 14190985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 2894100 - 2894180
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||| |||||||||||||||||||    
T  2894100 aaggtgagttcctttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataatt 2894180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 1e-70; HSPs: 2)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 326 - 481
Target Start/End: Original strand, 20809822 - 20809977
Alignment:
Q  326 aggttaattacggaagccctcatggttgagcgtgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatgttattttaaaggattaaaggtga 425  Q
    |||||||||||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20809822 aggttaattacggatgccctcatggttgagtgtgaagttggtttaggtttgaaatgcaaaagtgagacgagcctatgctattttaaaggattaaaggtga 20809921  T
Q  426 gttcctttagcttagaacccacctttggggatcaattatgattatattagattatt 481  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20809922 gttcctttagcttagaacccacctttggggatcaattatgattatgttagattatt 20809977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 5558525 - 5558445
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    ||||||||||||||||| |||||||||||||||||| ||  ||||||||||| |||||||| |||||||||||||||||||    
T  5558525 aaggtgagttcctttagtttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataatt 5558445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 124; Significance: 1e-63; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 324 - 499
Target Start/End: Complemental strand, 19803776 - 19803601
Alignment:
Q  324 caaggttaattacggaagccctcatggttgagcgtgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatgttattttaaaggattaaaggt 423  Q
    ||||||||||||   | ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  19803776 caaggttaattataaatgcccttatggttgagcatgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatgccattttaaaggattaaaggt 19803677  T
Q  424 gagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    ||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||| |||||||||||||||||||    
T  19803676 gagttcctttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataatt 19803601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 4341853 - 4341773
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||| ||||||    
T  4341853 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatgttagattattgagataatatggataatt 4341773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 42785453 - 42785533
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||| |||||||||||||||||||    
T  42785453 aaggtgagttcctttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataatt 42785533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 424 - 499
Target Start/End: Original strand, 21958048 - 21958123
Alignment:
Q  424 gagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||| ||||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||    
T  21958048 gagttcctttagcttagagcccacctttggggatcagttatgattatgttatattattgagataacatgaataatt 21958123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 6e-60; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 326 - 499
Target Start/End: Original strand, 34254913 - 34255086
Alignment:
Q  326 aggttaattacggaagccctcatggttgagcgtgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatgttattttaaaggattaaaggtga 425  Q
    ||||||||||  || || || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  34254913 aggttaattatagatgcacttatggttgagcatgaagttggttgaggtttaaaatgcaaaagtgagacgagcctatgccattttaaaggattaaaggtga 34255012  T
Q  426 gttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||| |||||||| |||||||||||||||||||    
T  34255013 gttcctttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataatt 34255086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 325 - 470
Target Start/End: Complemental strand, 28146408 - 28146264
Alignment:
Q  325 aaggttaattacggaagccctcatggttgagcgtgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatgttattttaaaggattaaaggtg 424  Q
    ||||||||||| ||| ||||| ||||||||||||||||||| |  | |||||||||||||||||||||||||||||||  ||||||||||||| ||||||    
T  28146408 aaggttaattatggatgcccttatggttgagcgtgaagttgataaatgtttgaaatgcaaaagtgagacgagcctatgccattttaaaggatt-aaggtg 28146310  T
Q  425 agttcctttagcttagaacccacctttggggatcaattatgattat 470  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  28146309 agttcctttagcttagaacccacctttggggatcaattatgattat 28146264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 26619930 - 26620010
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  26619930 aaggtgagttcctttagcttagaacccacctttggggatcaattataattatgttagattattgagataacatgaataatt 26620010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 26725843 - 26725923
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||    
T  26725843 aaggtgagttcctttagcttagaacccacctttggggatcaattataattatgttagattattgagataacatgaataatt 26725923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 5249516 - 5249596
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||||||| |||||||    
T  5249516 aaggtgagttcctttagcttagaacccacctttggggatcgattatgaatatgttagattattgagataacatcaataatt 5249596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 8520352 - 8520272
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    ||||||||||||||||||||||||| |||||||||||||| ||||||||||  |||||||||||||||||||| |||||||    
T  8520352 aaggtgagttcctttagcttagaacgcacctttggggatcgattatgattaggttagattattgagataacataaataatt 8520272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 29934100 - 29934180
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||||| ||  ||||||||||| |||||||| |||||||||||||||||||    
T  29934100 aaggtgagttcctttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataatt 29934180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 33295684 - 33295764
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    ||||||||||||||||||||||||||||||||||| |||| |||||||||||  || |||||| |||||||||||||||||    
T  33295684 aaggtgagttcctttagcttagaacccacctttggagatcgattatgattatgctacattattaagataacatgaataatt 33295764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 432 - 499
Target Start/End: Complemental strand, 28223201 - 28223134
Alignment:
Q  432 ttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  28223201 ttagcttagaacccacatttggggatcaattatgattatgttagattatcgagataacatgaataatt 28223134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 419 - 469
Target Start/End: Original strand, 5130527 - 5130577
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgatta 469  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  5130527 aaggtgagttcctttagcttagagcccacatttggggatcaattatgatta 5130577  T

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Target: chr3 (Bit Score: 118; Significance: 6e-60; HSPs: 3)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 326 - 499
Target Start/End: Original strand, 14530048 - 14530221
Alignment:
Q  326 aggttaattacggaagccctcatggttgagcgtgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatgttattttaaaggattaaaggtga 425  Q
    ||||||||||  || || || |||||||||| |||||||||||||||||| ||||||||||||||||||||||||||  |||||||||||||||||||||    
T  14530048 aggttaattatagatgcacttatggttgagcatgaagttggttgaggtttaaaatgcaaaagtgagacgagcctatgccattttaaaggattaaaggtga 14530147  T
Q  426 gttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    ||||||||||||||||||||||||||||| ||  ||||||||||| |||||||| |||||||||||||||||||    
T  14530148 gttcctttagcttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataatt 14530221  T

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Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 364 - 432
Target Start/End: Complemental strand, 19451851 - 19451779
Alignment:
Q  364 tggttgaggtttgaaatgcaaaa---gtgagacgagcctatgttatttt-aaaggattaaaggtgagttcctt 432  Q
    |||||||||||||||||||||||   |||||||| | ||||| |||||| |||||||||||||||||||||||    
T  19451851 tggttgaggtttgaaatgcaaaataagtgagacgggtctatgctatttttaaaggattaaaggtgagttcctt 19451779  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 320 - 355
Target Start/End: Complemental strand, 19451879 - 19451844
Alignment:
Q  320 cattcaaggttaattacggaagccctcatggttgag 355  Q
    |||||||||||||||||||| |||||||||||||||    
T  19451879 cattcaaggttaattacggatgccctcatggttgag 19451844  T

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Target: scaffold0158 (Bit Score: 116; Significance: 9e-59; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 324 - 499
Target Start/End: Original strand, 26164 - 26339
Alignment:
Q  324 caaggttaattacggaagccctcatggttgagcgtgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatgttattttaaaggattaaaggt 423  Q
    ||||||||||||  || ||||| |||||||||| |||| ||||||||||||||||||||||||||||||||||||||||  ||||||||||| |||||||    
T  26164 caaggttaattatagatgcccttatggttgagcatgaaattggttgaggtttgaaatgcaaaagtgagacgagcctatgccattttaaaggactaaaggt 26263  T
Q  424 gagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||| |||||||| ||  ||||||||||| |||||||| |||||||||||||||||||    
T  26264 gagttcctttagcttagaacccgcctttgggaatggattatgattatgttagattaatgagataacatgaataatt 26339  T

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Target: scaffold0060 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 303 - 402
Target Start/End: Original strand, 39601 - 39699
Alignment:
Q  303 aggagcttaggaatcatcattcaaggttaattacggaagccctcatggttgagcgtgaagttggttgaggtttgaaatgcaaaagtgagacgagcctatg 402  Q
    |||||||  ||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||    
T  39601 aggagctatggaatca-cattcaaggttaattacggatgccctcatggttgagcgtgaagttggttgaggattgaaatgcgaaagtgagacgagcctatg 39699  T

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Target: chr5 (Bit Score: 57; Significance: 1e-23; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 37368425 - 37368505
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||| |||||||||||||| |||| |||||||||||  ||||||||| |||||||||||||||||    
T  37368425 aaggtgagttcctttagctttgaacccacctttggagatcgattatgattatgctagattattaagataacatgaataatt 37368505  T

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Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 419 - 499
Target Start/End: Complemental strand, 41529147 - 41529067
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    ||||||||||||||||| |||||||||||||||||| ||  ||||||||||| |||||||| |||||||||||||||||||    
T  41529147 aaggtgagttcctttagtttagaacccacctttgggaatggattatgattatgttagattaatgagataacatgaataatt 41529067  T

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Target: scaffold0038 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 432 - 499
Target Start/End: Complemental strand, 23699 - 23632
Alignment:
Q  432 ttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||| |||||||||||||||||||||| ||||||||| ||||||||||||||||||    
T  23699 ttagcttagaacccacatttggggatcaattatgattatgttagattatcgagataacatgaataatt 23632  T

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Target: chr2 (Bit Score: 53; Significance: 3e-21; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 419 - 499
Target Start/End: Original strand, 2742872 - 2742952
Alignment:
Q  419 aaggtgagttcctttagcttagaacccacctttggggatcaattatgattatattagattattgagataacatgaataatt 499  Q
    |||||||||||||||||||||||||||||||||||| ||  || |||||||| |||| ||| |||||||||||||||||||    
T  2742872 aaggtgagttcctttagcttagaacccacctttgggaatggatcatgattatgttagtttaatgagataacatgaataatt 2742952  T

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