View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8005_high_5 (Length: 348)
Name: NF8005_high_5
Description: NF8005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8005_high_5 |
 | |
|
| [»] scaffold0640 (1 HSPs) |
| | |
|
| [»] scaffold2156 (1 HSPs) |
| | |
|
| [»] scaffold0648 (1 HSPs) |
| | |
|
| [»] scaffold0274 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold0640 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: scaffold0640
Description:
Target: scaffold0640; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 18 - 333
Target Start/End: Original strand, 5095 - 5410
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5095 |
aaggaaaccaactggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
5194 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
5195 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaacaactttacctccaatttaccaaatgggttttttaatctaaccaaagatat |
5294 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5295 |
cacctctcttgaccttgcgcaaaataatatatatggcgagataccttctagcatgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
5394 |
T |
|
| Q |
318 |
ctacaaggatcagttt |
333 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
5395 |
ctacaaggatcagttt |
5410 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold2156 (Bit Score: 196; Significance: 1e-106; HSPs: 1)
Name: scaffold2156
Description:
Target: scaffold2156; HSP #1
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 18 - 253
Target Start/End: Complemental strand, 236 - 1
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
236 |
aaggaaaccaactggcttcaagcagtaagtacctttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaatccatcta |
137 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||| ||||||||||| |
|
|
| T |
136 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaacaactttacctccaatttaccaaatgggttttttaatctaaccaaagatat |
37 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatgg |
253 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||| |
|
|
| T |
36 |
cacctctcttgaccttgcgcaaaataatatatatgg |
1 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0648 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: scaffold0648
Description:
Target: scaffold0648; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 168 - 333
Target Start/End: Complemental strand, 4261 - 4096
Alignment:
| Q |
168 |
aacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatataacctctcttgaccttgcacaaaataatatatatggtgagataccttcta |
267 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
4261 |
aacttcacctctaatttaccaaatgggttttttaatctcaccaaagatatcacctctcttgaccttgcgcaaaataatatatatggtgagatacctcgta |
4162 |
T |
|
| Q |
268 |
gcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaactacaaggatcagttt |
333 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4161 |
gcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaactacaaggatcagttt |
4096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0274 (Bit Score: 146; Significance: 7e-77; HSPs: 1)
Name: scaffold0274
Description:
Target: scaffold0274; HSP #1
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 168 - 333
Target Start/End: Complemental strand, 3731 - 3566
Alignment:
| Q |
168 |
aacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatataacctctcttgaccttgcacaaaataatatatatggtgagataccttcta |
267 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||| || |
|
|
| T |
3731 |
aacttcacctctaatttaccaaatgggttttttaatctcaccaaagatatcacctctcttgaccttgcgcaaaataatatatatggtgagatacctcgta |
3632 |
T |
|
| Q |
268 |
gcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaactacaaggatcagttt |
333 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3631 |
gcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaactacaaggatcagttt |
3566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 130; Significance: 3e-67; HSPs: 33)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 122 - 307
Target Start/End: Original strand, 17949624 - 17949809
Alignment:
| Q |
122 |
gtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatataacc |
221 |
Q |
| |
|
|||||| ||||| |||||||||||||||||||||||| || ||| ||||||||||| ||||||||||||||||| | ||||||||||||||||| ||| |
|
|
| T |
17949624 |
gtatttgaatttatcttcacttgtaactctttatcttgatgaaaacaacttcacctcccatttaccaaatgggtttttcaatctcaccaaagatatcacc |
17949723 |
T |
|
| Q |
222 |
tctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctc |
307 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
17949724 |
tctcttgaccttgcactaaataatatatatggtgagataccttcaagcttgctaaaccttcaaaatttgagacaccttgatctctc |
17949809 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 17 - 329
Target Start/End: Complemental strand, 14896699 - 14896387
Alignment:
| Q |
17 |
caaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatct |
116 |
Q |
| |
|
||||||| ||||||||||||||| ||| ||||| ||||| |||||||||||| ||||| ||| | | || ||||| |||||||||||| |||| ||||| |
|
|
| T |
14896699 |
caaggaatccaattggcttcaagtagtgagtacacttccctcactattagaactacaattgactgattgcaaactgaacaacttcatgttcaactcatct |
14896600 |
T |
|
| Q |
117 |
attgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagata |
216 |
Q |
| |
|
|||||||||| |||||||||||| |||||| |||| |||||||| ||| |||||||||||| |||| |||||||||||| |||||||||| ||| || |
|
|
| T |
14896599 |
tttgagtatttgaatttgtcttcaattgtaattcttaatctttctttaaacaacttcacctctcatttgccaaatgggttttttaatctcacaaaaaatc |
14896500 |
T |
|
| Q |
217 |
taacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaacca |
316 |
Q |
| |
|
| |||| |||| ||||| ||| |||||| |||||||||||||||| ||||||||||||||||||| ||| ||||| |||||||||||| ||||| | |
|
|
| T |
14896499 |
tcacctatctttaccttcatgaaagcaatatacatggtgagataccttcaagcttgctaaaccttcaaattttaagacaccttgatctctctaaaaacaa |
14896400 |
T |
|
| Q |
317 |
actacaaggatca |
329 |
Q |
| |
|
|||||||||||| |
|
|
| T |
14896399 |
cctacaaggatca |
14896387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 18 - 329
Target Start/End: Original strand, 18108131 - 18108442
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||| ||| |||||| ||| | | | ||| ||||||||||||||||||| || | ||| ||| || || |||||| |||| | |||||| |
|
|
| T |
18108131 |
aaggaaaccaactggtttcaagtagtgaattcactttcttcactattagaattacagttgtttgactataaccttaataacttcttgattggaacatcta |
18108230 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
| ||||| |||||||||||||||||||||||| ||||| || ||| ||||||||||| ||||||||||||||||| | ||||||||||| ||||| |
|
|
| T |
18108231 |
tcagatatttgaatttgtcttcacttgtaactcttaatcttgatgaaaacaacttcacctcccatttaccaaatgggtttttcaatctcaccaatgatat |
18108330 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| | |||||| |
|
|
| T |
18108331 |
cacctctcttgaccttgcgctgaataatatatatggtgagataccttcaagcttgctaaaccttcaaaatttgagacaccttgatctctcaaataaccaa |
18108430 |
T |
|
| Q |
318 |
ctacaaggatca |
329 |
Q |
| |
|
|||||||||||| |
|
|
| T |
18108431 |
ctacaaggatca |
18108442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 18 - 329
Target Start/End: Original strand, 18115666 - 18115968
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||| ||||| | ||||| || ||||||||| |||||| |
|
|
| T |
18115666 |
aaggaaaccaattggcttcaaatagtgaatacacttccttcactattagaattacagttgagtcattgtaacctgaacaacttc---------ccatctg |
18115756 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||| |||||||| ||| |||||||||||| ||||||| |||||||| ||||||| ||||||||| | |
|
|
| T |
18115757 |
ttgagtatttgaatttgtctttacttgtaactcttgatctttctttaaacaacttcacctctcatttacctgatgggttttttaatcttaccaaagatct |
18115856 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
|| | |||||||||| |||| | |||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||| | |||||| |
|
|
| T |
18115857 |
cacttatcttgacctttcacagagtaatatatatggtgagataccttcaagcttgctaaaccttcaaaatttgagagacctttatctctcctataaccaa |
18115956 |
T |
|
| Q |
318 |
ctacaaggatca |
329 |
Q |
| |
|
||||||| |||| |
|
|
| T |
18115957 |
ctacaagaatca |
18115968 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 18 - 332
Target Start/End: Original strand, 19461233 - 19461538
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||| ||||| | ||||| || ||||| ||| |||||| |
|
|
| T |
19461233 |
aaggaaaccaattggcttcaaatagtgaatacacttccttcactattagaattacagttgagtcattgtaacctgaacaatttc---------ccatctg |
19461323 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|||||||||| |||||||||| ||||||||||||| |||||||| ||| || ||||||||| ||||||| |||||||| ||||||||||||||||| | |
|
|
| T |
19461324 |
ttgagtatttgaatttgtctttacttgtaactcttgatctttctttaaacaatttcacctctcatttacctgatgggttttttaatctcaccaaagatct |
19461423 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
|| | |||||||||| |||| | ||||||||| |||||||||||||| ||||||||||||||||||||||||||| | ||| |||||||| | |||||| |
|
|
| T |
19461424 |
cacttatcttgacctttcacagagtaatatatacggtgagataccttcaagcttgctaaaccttcaaaatttgagagacctttatctctcttataaccaa |
19461523 |
T |
|
| Q |
318 |
ctacaaggatcagtt |
332 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
19461524 |
ctacaagaatcagtt |
19461538 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 21 - 329
Target Start/End: Original strand, 19424311 - 19424619
Alignment:
| Q |
21 |
gaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatctattg |
120 |
Q |
| |
|
|||| ||||||| |||||| ||| ||||| ||||||||||||||| |||||||| | ||| | || |||| |||||||||||||||||| ||||| |||| |
|
|
| T |
19424311 |
gaaagcaattggattcaaggagtcagtacacttccttcactattacaattacaaataagtgattggaaaccaaacaacttcatgatcaacccatcaattg |
19424410 |
T |
|
| Q |
121 |
agtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatataac |
220 |
Q |
| |
|
||||||| |||||||||||| ||||||| ||| |||||||| || || ||| ||||| ||||||| |||||||| ||||||||||||||||| | || |
|
|
| T |
19424411 |
agtatttgaatttgtcttcaattgtaacacttgatctttctttcaacaatttcgcctctcatttacctgatgggttttttaatctcaccaaagatctcac |
19424510 |
T |
|
| Q |
221 |
ctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaacta |
320 |
Q |
| |
|
|| |||| ||| || | |||||| |||||| ||||||||| ||||||||||||||||||||||||| | | |||||||||||||||||||||||| |
|
|
| T |
19424511 |
ctatcttagacttcaccagagcaatatacatggtgggataccttcaagcttgctaaaccttcaaaatttgacataccttgatctctctgaaaaccaacta |
19424610 |
T |
|
| Q |
321 |
caaggatca |
329 |
Q |
| |
|
|||||||| |
|
|
| T |
19424611 |
taaggatca |
19424619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 18 - 328
Target Start/End: Original strand, 18015795 - 18016096
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||||||||||||| ||| | | | ||||||||||||||||||||| | ||||| || || || ||||||||| |||||| |
|
|
| T |
18015795 |
aaggaaaccaattggcttcaaatagtgaattcacttccttcactattagaattagagttgagtgggtgcaacctgaacaacttc---------ccatctg |
18015885 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|||||||||| |||||| |||||||||||||||||| ||||||| || |||||||||||| || |||| |||||||| ||||||||||||||||| | |
|
|
| T |
18015886 |
ttgagtatttgaatttgccttcacttgtaactctttctctttctttcaacaacttcacctctcatatacctgatgggttttttaatctcaccaaagatct |
18015985 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
||||||||||||||| || | | |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| | |||||| |
|
|
| T |
18015986 |
cacctctcttgacctttcatatagcaatatacatggtgagataccttctagcttgctaaaccttcaaaatttgagacaacttcatctctctaataaccaa |
18016085 |
T |
|
| Q |
318 |
ctacaaggatc |
328 |
Q |
| |
|
||||||||||| |
|
|
| T |
18016086 |
ctacaaggatc |
18016096 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 18 - 332
Target Start/End: Original strand, 19413885 - 19414190
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
|||||||||||||||| |||| ||| | ||| ||||||||||||||||||||||| ||||| | ||||| ||||| |||||| |||||| |
|
|
| T |
19413885 |
aaggaaaccaattggcctcaaatagtgaatacacttccttcactattagaattacagatgagtcattgtaacctaaataacttc---------ccatctg |
19413975 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
||||| |||| |||||||||||| ||||||||||| |||||||| || |||||||||||| || |||| |||||||| ||||||||||||||||| | |
|
|
| T |
19413976 |
ttgagcatttgaatttgtcttcaattgtaactcttgatctttcttacaacaacttcacctctcatatacctgatgggttttttaatctcaccaaagatct |
19414075 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
||||||||||||||| || | | |||||| |||||||||||||||| ||||||||||||||||||||||||||||| |||||||| || | |||||| |
|
|
| T |
19414076 |
cacctctcttgacctttcatatagcaatatacatggtgagataccttcaagcttgctaaaccttcaaaatttgagacaccttgatctatcaaataaccaa |
19414175 |
T |
|
| Q |
318 |
ctacaaggatcagtt |
332 |
Q |
| |
|
|||||||| |||||| |
|
|
| T |
19414176 |
ctacaagggtcagtt |
19414190 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 92 - 326
Target Start/End: Original strand, 17941720 - 17941954
Alignment:
| Q |
92 |
aaacaacttcatgatcaaaccatctattgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaat |
191 |
Q |
| |
|
|||| |||||||||||| |||||||||||||||| ||||||||||||||||||||||||| |||||||||||| || ||||||||| || |||| || |
|
|
| T |
17941720 |
aaactacttcatgatcagctcatctattgagtatttgaatttgtcttcacttgtaactctttctctttctggaaacaatttcacctctcatatacctgat |
17941819 |
T |
|
| Q |
192 |
gggtttcttaatctcaccaaagatataacctctcttgaccttgcac-aaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttg |
290 |
Q |
| |
|
|||||| ||||||||||||||||| | || | |||||||||| ||| | | |||||| |||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
17941820 |
gggttttttaatctcaccaaagatctcacttatcttgacctt-cacgagagcaatatacatggtgagataccttcaagcttgctaaaccttcaaaatttg |
17941918 |
T |
|
| Q |
291 |
agacatcttgatctctctgaaaaccaactacaagga |
326 |
Q |
| |
|
||||| ||| |||||||| | ||||||||||||||| |
|
|
| T |
17941919 |
agacacctttatctctcttataaccaactacaagga |
17941954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 51 - 329
Target Start/End: Original strand, 19436755 - 19437033
Alignment:
| Q |
51 |
cttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatctattgagtatttcaatttgtcttcacttgtaactc |
150 |
Q |
| |
|
||||||||||||||||||||| | ||||| || | || ||||||||| |||| || ||||||||| ||||||| |||||||||||||||||||||| |
|
|
| T |
19436755 |
cttccttcactattagaattaaagttgagtgggtgcagcctgaacaacttcgtgattaatccatctattcagtatttaaatttgtcttcacttgtaactc |
19436854 |
T |
|
| Q |
151 |
tttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatataacctctcttgaccttgcacaaaataatatata |
250 |
Q |
| |
|
|||||||||| | || | ||||||||| | ||||| |||||||| ||||||||||||||||| | ||||||||| ||||| | || ||||| | |
|
|
| T |
19436855 |
tttatctttcagataacgatttcacctctcacttaccggatgggttttttaatctcaccaaagatctcacctctctttacctttcgtttaacaatattca |
19436954 |
T |
|
| Q |
251 |
tggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaactacaaggatca |
329 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||||||||||||| |
|
|
| T |
19436955 |
tggggagataccttctagcttgctaaaccttcaaaatttgagacaccttgatctctcttataaccaactacaaggatca |
19437033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 18 - 329
Target Start/End: Original strand, 19351095 - 19351397
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||||||||||||| ||| | | | ||||||||||| ||| ||||||| || || | ||||| || ||||||||| |||||| |
|
|
| T |
19351095 |
aaggaaaccaattggcttcaaatagtgaattcacttccttcactgttaaaattacagttgggtgaatgtaacctgaacaacttc---------ccatctg |
19351185 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |||||| | |||||||||||| || |||||||||| |||||||| ||||||||||||||||| | |
|
|
| T |
19351186 |
ttgagtatttgaatttgtcttcacttgtaactcttgatctttttcgaaataacttcaactttaatttaccagatgggttttttaatctcaccaaagatct |
19351285 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
|| | |||| ||||| |||||| ||||||||||||| |||||||||| ||||| |||||||||||||| ||||||| ||||||||| | |||||| |
|
|
| T |
19351286 |
cacttatcttcacctttcacaaagtaatatatatggtaagataccttcaagcttactaaaccttcaaaaactgagacaccttgatctcaaatataaccaa |
19351385 |
T |
|
| Q |
318 |
ctacaaggatca |
329 |
Q |
| |
|
|||||||||||| |
|
|
| T |
19351386 |
ctacaaggatca |
19351397 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 332
Target Start/End: Complemental strand, 17727988 - 17727675
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
|||||||| ||||||||||||| | | | ||| ||||||||||| ||||||||||| ||||| || || |||||||||||| ||||||| ||||||| |
|
|
| T |
17727988 |
aaggaaacaaattggcttcaagtattgaatacacttccttcactgttagaattacagttgagtgggtgcaacctaaacaacttcctgatcaatccatcta |
17727889 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||||||||||| || | ||||||||| | || || ||| ||| ||||||||||||||||| | |
|
|
| T |
17727888 |
ttgagtatttgaatttgtcttcaattgtaactctttatctttcaaacaacgatttcacctctcactt-cctggtggattttttaatctcaccaaagatct |
17727790 |
T |
|
| Q |
218 |
aacctctcttgaccttgcac-aaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaacca |
316 |
Q |
| |
|
|||| | |||||||| ||| | | |||||| ||||||||||||||||||||||| |||||||||||||||| | ||| |||| ||||||||||||||| |
|
|
| T |
17727789 |
cacctatgttgacctt-cacgagagcaatatacatggtgagataccttctagcttggtaaaccttcaaaatttaacacaccttggtctctctgaaaacca |
17727691 |
T |
|
| Q |
317 |
actacaaggatcagtt |
332 |
Q |
| |
|
||||||||| |||||| |
|
|
| T |
17727690 |
actacaagggtcagtt |
17727675 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 332
Target Start/End: Complemental strand, 19029217 - 19028904
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
|||||||| ||||||||||||| | | | ||| ||||||||||| ||||||||||| ||||| || || |||||||||||| ||||||| ||||||| |
|
|
| T |
19029217 |
aaggaaacaaattggcttcaagtattgaatacacttccttcactgttagaattacagttgagtgggtgcaacctaaacaacttcctgatcaatccatcta |
19029118 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|||||||||| |||||||||||| ||||||||||||||||||| || | ||||||||| | || || ||| ||| ||||||||||||||||| | |
|
|
| T |
19029117 |
ttgagtatttgaatttgtcttcaattgtaactctttatctttcaaacaacgatttcacctctcactt-cctggtggattttttaatctcaccaaagatct |
19029019 |
T |
|
| Q |
218 |
aacctctcttgaccttgcac-aaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaacca |
316 |
Q |
| |
|
|||| | |||||||| ||| | | |||||| ||||||||||||||||||||||| |||||||||||||||| | ||| |||| ||||||||||||||| |
|
|
| T |
19029018 |
cacctatgttgacctt-cacgagagcaatatacatggtgagataccttctagcttggtaaaccttcaaaatttaacacaccttggtctctctgaaaacca |
19028920 |
T |
|
| Q |
317 |
actacaaggatcagtt |
332 |
Q |
| |
|
||||||||| |||||| |
|
|
| T |
19028919 |
actacaagggtcagtt |
19028904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 18 - 329
Target Start/End: Original strand, 19392841 - 19393152
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
|||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||| | ||| | ||||| || | ||||||| |||||| |||||| |
|
|
| T |
19392841 |
aaggaaaccaattggcttcaagcagtgagtatactttcttcactgttagaattacaattaagtgaatgtaacctcgaaaacttcaagatcaagccatctt |
19392940 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |||||||| || ||||||||||| ||| |||| ||||||||| |||||| |||| | || |
|
|
| T |
19392941 |
ttgagtatttgaatttgtcttcacttgtaactcttgatctttcttacaacaacttcacctccaatatacctaatgggttttttaatcgtaccacatatgc |
19393040 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
|||| ||| ||||| | | || |||||||||||||||||||| || |||||||||||||||||||||||| | ||| |||||| |||||| ||| |
|
|
| T |
19393041 |
cacctaccttcaccttaaggagagcaacatatatggtgagataccttcaagtttgctaaaccttcaaaatttgagataccttaatctctttgaaaatcaa |
19393140 |
T |
|
| Q |
318 |
ctacaaggatca |
329 |
Q |
| |
|
|||||||||||| |
|
|
| T |
19393141 |
ctacaaggatca |
19393152 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 17 - 329
Target Start/End: Original strand, 18146521 - 18146833
Alignment:
| Q |
17 |
caaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatct |
116 |
Q |
| |
|
|||||||||||| ||| |||||| ||||| | | ||||||||||||||| ||||| | || | | ||||| || ||||||||||| || || ||||| |
|
|
| T |
18146521 |
caaggaaaccaactggtttcaagtagtaaattcacttccttcactattaaaattaaagttgtttaattgtaacctgaacaacttcataattaacacatct |
18146620 |
T |
|
| Q |
117 |
attgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagata |
216 |
Q |
| |
|
|||| |||||| ||||||||||||||| |||||||| ||||||| |||||||| || |||||| ||||||| |||||| | ||||||| |||||||||| |
|
|
| T |
18146621 |
attgggtatttgaatttgtcttcacttataactcttgatctttcaggaaataatttaacctctcatttacctgatgggtattttaatcttaccaaagata |
18146720 |
T |
|
| Q |
217 |
taacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaacca |
316 |
Q |
| |
|
| | || |||| ||||| | | ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||| |||||| | | ||| | |
|
|
| T |
18146721 |
tcaactatcttagccttgaggagagcaatatatatggtgagataccttcaagcttgctaaaccttcaaaatttgagacaccttaatctctataataacaa |
18146820 |
T |
|
| Q |
317 |
actacaaggatca |
329 |
Q |
| |
|
|||||| |||||| |
|
|
| T |
18146821 |
actacacggatca |
18146833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 18 - 332
Target Start/End: Original strand, 19333710 - 19334015
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||||| | ||||| ||| | | | ||||||||||||||||||||||| ||||| | |||||| | ||||||||| |||| | |
|
|
| T |
19333710 |
aaggaaaccaatttgtttcaaatagtgaattcacttccttcactattagaattacagttgagtgattgtaaattgaacaacttc---------ccatttg |
19333800 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
||||||||| |||||||||||| ||||||||||| |||||||| |||| ||||| |||||| |||||| |||||||| ||||||| |||||||| | |
|
|
| T |
19333801 |
atgagtatttgaatttgtcttcaattgtaactcttgatctttctagaaacaactttacctctcatttacttgatgggttttttaatctttccaaagatct |
19333900 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
| | ||| |||||| | || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | |||||| |
|
|
| T |
19333901 |
caagtatctcgacctttcttggaacaatatatatggtgagataccttcaagcttgctaaaccttcaaaatttgagacaccttgatctctcttataaccaa |
19334000 |
T |
|
| Q |
318 |
ctacaaggatcagtt |
332 |
Q |
| |
|
||||||||||||||| |
|
|
| T |
19334001 |
ctacaaggatcagtt |
19334015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 111 - 304
Target Start/End: Original strand, 19375479 - 19375672
Alignment:
| Q |
111 |
ccatctattgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcacca |
210 |
Q |
| |
|
|||||| |||||| ||| |||||||||||| |||||| |||| |||||||| ||| || ||||||| | ||||||| |||||||| |||||||||||| |
|
|
| T |
19375479 |
ccatctgttgagtttttgaatttgtcttcaattgtaagtcttgatctttcttcaaacaatttcacctttcatttacctgatgggttttttaatctcacca |
19375578 |
T |
|
| Q |
211 |
aagatataacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatct |
304 |
Q |
| |
|
||||||| |||| |||||||||||| |||||||||||||||||||||||||| |||||||||||||||| |||||||||||| |||||||| |
|
|
| T |
19375579 |
aagatatcacctatcttgaccttgcgatgaataatatatatggtgagataccttcaagcttgctaaaccttccaaatttgagacaacttgatct |
19375672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 18 - 323
Target Start/End: Original strand, 16676911 - 16677216
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||||||| |||| ||| | ||| |||||||||||||||||||| | |||||| |||||| | |||||||||||| |||| |||||| |
|
|
| T |
16676911 |
aaggaaaccaattggattcagaaagtgaatacacttccttcactattagaattgcggttgagttcttgtaaattgaacaacttcatgctcaactcatcta |
16677010 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
||| |||||| |||| |||||| ||||||||||| |||||||| || || || |||| | | |||| ||| |||||| | ||||||||||||||||| |
|
|
| T |
16677011 |
ttgggtatttgaattcctcttcaattgtaactcttgatctttcttacaacaatttaacctttcagttactaaacgggtttttaaatctcaccaaagatat |
16677110 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
| |||||||||| || ||||||||| |||||||||||||||| |||||| ||||||||||| |||||||||| |||||| ||||| |||||||| |
|
|
| T |
16677111 |
caagcatcttgacctttcatggaataatatacatggtgagataccttcaagcttgttaaaccttcaacatttgagacaccttgatgtctctcaaaaccaa |
16677210 |
T |
|
| Q |
318 |
ctacaa |
323 |
Q |
| |
|
|||||| |
|
|
| T |
16677211 |
ctacaa |
16677216 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 18 - 271
Target Start/End: Original strand, 18022494 - 18022747
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||| ||| |||||| | | | | | ||||||||||||||| ||||||| |||| | |||||| | || | |||||||||||| ||||||| |
|
|
| T |
18022494 |
aaggaaaccaactggtttcaagtaatcaattcacttccttcactattacaattacagttgagcgattgtaaattgaatagcttcatgatcaacccatcta |
18022593 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |||||||| || |||||||||||| ||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
18022594 |
ttgagtatttgaatttgtcttcacttgtaactcttgatctttctttcaacaacttcacctctcatttaccaaatgggttttttaatctcaccaaagatat |
18022693 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagctt |
271 |
Q |
| |
|
| || ||||| ||| | | | |||||| |||||||||||||||| ||||| |
|
|
| T |
18022694 |
caactatcttgtcctcttagagagcaatatacatggtgagataccttcaagctt |
18022747 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 19 - 233
Target Start/End: Complemental strand, 24493725 - 24493511
Alignment:
| Q |
19 |
aggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatctat |
118 |
Q |
| |
|
||||||||||||||||||||| ||| ||| |||||||||||||||||||||| ||| | | ||||| |||||||||||||||||||| ||| | | |
|
|
| T |
24493725 |
aggaaaccaattggcttcaagaagtggctacacttccttcactattagaattacgtatgattgattgtaacctaaacaacttcatgatcaactcattttt |
24493626 |
T |
|
| Q |
119 |
tgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatata |
218 |
Q |
| |
|
|||||||| |||||||||||||||||||||||| ||||||||| ||| ||||||| |||| | |||||||||| ||| |||| |||||||||||||| |
|
|
| T |
24493625 |
tgagtattcgaatttgtcttcacttgtaactcttgatctttctgaaaacaacttcagctctcagttaccaaatgcattttttaacctcaccaaagatatc |
24493526 |
T |
|
| Q |
219 |
acctctcttgacctt |
233 |
Q |
| |
|
|||| ||||| |||| |
|
|
| T |
24493525 |
acctatcttggcctt |
24493511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 18 - 304
Target Start/End: Original strand, 19380594 - 19380871
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||| |||||| |||||| ||| | ||| ||||||||||||||||||||||| ||||| | ||||| || ||||||||| |||||| |
|
|
| T |
19380594 |
aaggaaaataattggtttcaagtagtgaatacacttccttcactattagaattacagttgagtcattgtaacctgaacaacttc---------ccatctg |
19380684 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| | |||||| ||||||| |||||||||| |||||||| |
|
|
| T |
19380685 |
ttgagtatttgaatttgtcttcacttgtaactctccatctttctggaaacaacttcacctctcacttaccagatgggttgtttaatctcacgaaagatat |
19380784 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatct |
304 |
Q |
| |
|
| ||||||| ||| | ||||||||||||||||| ||||| ||||||||||||||||||||||||| || |||||||| |
|
|
| T |
19380785 |
caactctcttagatttgagggtagcaatatatatggtgagatgccttcaagcttgctaaaccttcaaaatttgaaactccttgatct |
19380871 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 93 - 322
Target Start/End: Original strand, 25462817 - 25463046
Alignment:
| Q |
93 |
aacaacttcatgatcaaaccatctattgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatg |
192 |
Q |
| |
|
||||||||||||| |||| ||||||||| |||||| ||||||||||| ||| |||||||| |||||||| || |||||||||||| ||||||| ||| |
|
|
| T |
25462817 |
aacaacttcatgaccaaatcatctattgggtatttgaatttgtcttcgcttttaactcttgatctttcttacaacaacttcacctctcatttacctgatg |
25462916 |
T |
|
| Q |
193 |
ggtttcttaatctcaccaaagatataacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgag |
292 |
Q |
| |
|
| ||| |||||||| | |||||| | | | |||||||||| || |||||| || ||||||| |||||||| |||||||||||||||||||||||||| |
|
|
| T |
25462917 |
gtttttttaatctctcaaaagatttcatgtatcttgacctttcatttaataatgtacatggtgacataccttcaagcttgctaaaccttcaaaatttgag |
25463016 |
T |
|
| Q |
293 |
acatcttgatctctctgaaaaccaactaca |
322 |
Q |
| |
|
||| |||||||| ||| | |||||| |||| |
|
|
| T |
25463017 |
acaccttgatctatctcataaccaattaca |
25463046 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 18 - 290
Target Start/End: Original strand, 18164848 - 18165120
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||||||| |||||||||| ||||| ||||||||||||||||||||||| ||||| | || || || ||||||||||| || | ||||| |
|
|
| T |
18164848 |
aaggaaaccaattggattcaagcagtgagtacacttccttcactattagaattacagttgagtaattgcaacctgaacaacttcataattggaacatctt |
18164947 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|| ||||| | |||||||||||| ||||||||||| |||||||| || | ||||||||| | |||| |||| ||| ||||||||||||||||||| |
|
|
| T |
18164948 |
ttaagtatgtgaatttgtcttcaattgtaactcttgatctttcttacaactatttcacctctcacttacttgatggattttttaatctcaccaaagatat |
18165047 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttg |
290 |
Q |
| |
|
| || |||| |||| || || |||||| |||||||||||||||| ||||||||||| |||||||||||| |
|
|
| T |
18165048 |
caactttcttagcctttcagggaacaatataaatggtgagataccttcaagcttgctaaaacttcaaaatttg |
18165120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 111 - 322
Target Start/End: Original strand, 19399493 - 19399704
Alignment:
| Q |
111 |
ccatctattgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcacca |
210 |
Q |
| |
|
|||||| |||||||||| |||||||||||||||||||||||| ||||||| || |||||||||| | || |||| |||||||| ||||| |||||| |
|
|
| T |
19399493 |
ccatctcttgagtatttgaatttgtcttcacttgtaactcttgatctttcaaacaacaacttcacctttcatatacctgatgggttttttaatttcacca |
19399592 |
T |
|
| Q |
211 |
aagatataacctctcttgaccttgcacaa-aataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctg |
309 |
Q |
| |
|
||||| | |||| |||| |||||| |||| || ||||||||||||||||||||||| |||||||||| |||||||||||||| ||| ||||||||| || |
|
|
| T |
19399593 |
aagatctcacctgtctttaccttg-acaataacaatatatatggtgagataccttcaagcttgctaacccttcaaaatttgaaacaccttgatctcgttg |
19399691 |
T |
|
| Q |
310 |
aaaaccaactaca |
322 |
Q |
| |
|
| ||| ||||||| |
|
|
| T |
19399692 |
ataacaaactaca |
19399704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 18 - 332
Target Start/End: Original strand, 18143934 - 18144235
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||||||||||||| ||| | ||| ||||||||||||||||||||||| |||||| ||||| || |||||||| |||||||| |||| || |
|
|
| T |
18143934 |
aaggaaaccaattggcttcaaatagtgaatacacttccttcactattagaattacagttgagttcttgtaacctgaacaacttaatgatcaacccatata |
18144033 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
| ||||||| |||||||| ||| ||||||||||| |||||||| ||| |||||||||||| ||||||| || ||||| |||||||||| ||| |
|
|
| T |
18144034 |
tcaagtatttgaatttgtcgtcaattgtaactcttgatctttctttaaacaacttcacctctcatttacctgataggttttttaatctcac-----ttat |
18144128 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
|||||||| || | | ||||||||||||||| ||||||| ||||||||||||||||| || | |||| | |||||||||| | | ||||| |
|
|
| T |
18144129 |
--------ttgacctttcatagagtaatatatatggtgacttaccttcaagcttgctaaaccttcagaaatcgagataccttgatctctttcataaccag |
18144220 |
T |
|
| Q |
318 |
ctacaaggatcagtt |
332 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
18144221 |
ttacaaggatcagtt |
18144235 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 18 - 329
Target Start/End: Original strand, 18103131 - 18103421
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||| ||| |||||| ||||||||| ||||||||| | ||||||||||| ||||||| ||||| || ||||||||| ||||| |
|
|
| T |
18103131 |
aaggaaaccaactggtttcaagtagtaagtacacttccttcattgttagaattacagttgagttattgtaacctgaacaacttc---------ccatcag |
18103221 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|||||||||| ||||||| |||| ||||||| ||| ||||||| | ||| || ||||| | | |||||| |||||||| ||||||||||| | |
|
|
| T |
18103222 |
ttgagtatttgaatttgtattcaattgtaacccttgatctttcagaaaacaatttcacttttcatttacatgatgggttttttaatctcaccta------ |
18103315 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
|||| ||||| | || ||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| | |||||| |
|
|
| T |
18103316 |
------tcttcaccttcgcgataacaatatatatggtgagataccttcaagcttgctaaaccttcaaaatttgagacaccttgatctctcttataaccaa |
18103409 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 111 - 191
Target Start/End: Original strand, 19436653 - 19436733
Alignment:
| Q |
111 |
ccatctattgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaat |
191 |
Q |
| |
|
|||||| |||||||||||||||| |||||||||||||||||| ||||||||||||| || ||||||||| ||||||||||| |
|
|
| T |
19436653 |
ccatctgttgagtatttcaatttatcttcacttgtaactcttgatctttctggaaacaaattcacctcttatttaccaaat |
19436733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 111 - 212
Target Start/End: Original strand, 17941523 - 17941624
Alignment:
| Q |
111 |
ccatctattgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcacca |
210 |
Q |
| |
|
|||||| |||| ||||| ||||||||||||||||||||||||| ||||||| |||| || ||||||||| || |||| |||||||| |||||||||||| |
|
|
| T |
17941523 |
ccatctgttgaatatttgaatttgtcttcacttgtaactctttctctttctagaaacaatttcacctcttatatacctgatgggttttttaatctcacca |
17941622 |
T |
|
| Q |
211 |
aa |
212 |
Q |
| |
|
|| |
|
|
| T |
17941623 |
aa |
17941624 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 19 - 72
Target Start/End: Original strand, 17941440 - 17941493
Alignment:
| Q |
19 |
aggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattac |
72 |
Q |
| |
|
||||||| ||||||||||||||||| | ||| ||||||||||||||||| |||| |
|
|
| T |
17941440 |
aggaaactaattggcttcaagcagtgaatacacttccttcactattagagttac |
17941493 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 328
Target Start/End: Original strand, 18116008 - 18116039
Alignment:
| Q |
297 |
cttgatctctctgaaaaccaactacaaggatc |
328 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
18116008 |
cttgatctctctgaaaaccaactacaaggatc |
18116039 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 328
Target Start/End: Original strand, 19334052 - 19334083
Alignment:
| Q |
297 |
cttgatctctctgaaaaccaactacaaggatc |
328 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
19334052 |
cttgatctctctgaaaaccaactacaaggatc |
19334083 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 273 - 308
Target Start/End: Original strand, 19407112 - 19407147
Alignment:
| Q |
273 |
ctaaaccttcaaaatttgagacatcttgatctctct |
308 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||| |
|
|
| T |
19407112 |
ctaaaccttcaaaatttgagacaccttgatctctct |
19407147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 328
Target Start/End: Original strand, 19461575 - 19461606
Alignment:
| Q |
297 |
cttgatctctctgaaaaccaactacaaggatc |
328 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |
|
|
| T |
19461575 |
cttgatctctctgaaaaccaactacaaggatc |
19461606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 126; Significance: 6e-65; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 21 - 326
Target Start/End: Complemental strand, 2710881 - 2710576
Alignment:
| Q |
21 |
gaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatctattg |
120 |
Q |
| |
|
|||||||||||||||||| ||| | ||| |||||||||||||||||| ||||| || || |||||||||| ||||||||||||||| || ||||||| |
|
|
| T |
2710881 |
gaaaccaattggcttcaaatagtgaatacacttccttcactattagaagtacaattgtctttttgtaaactaagcaacttcatgatcaacccgtctattg |
2710782 |
T |
|
| Q |
121 |
agtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatataac |
220 |
Q |
| |
|
||||| ||||||||||||||| |||||||| | |||||| | || |||||||||||| |||||||||||||||| |||||||||||||| | || | |
|
|
| T |
2710781 |
catatttgaatttgtcttcacttataactcttgaactttcttggaacaacttcacctctcctttaccaaatgggttttttaatctcaccaaacacatcaa |
2710682 |
T |
|
| Q |
221 |
ctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaacta |
320 |
Q |
| |
|
|| |||||||||| || | | |||||| ||||||||||||||||||||||| |||| |||| |||||||||||| ||| |||| ||| | ||||||||| |
|
|
| T |
2710681 |
ctatcttgacctttcatatagcaatatacatggtgagataccttctagcttgttaaagcttcgaaatttgagacaactttatctttctaataaccaacta |
2710582 |
T |
|
| Q |
321 |
caagga |
326 |
Q |
| |
|
|||||| |
|
|
| T |
2710581 |
caagga |
2710576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 18 - 329
Target Start/End: Original strand, 15532052 - 15532354
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
||||||||||| ||| ||||||||| ||||| ||||||||||||||||| ||| ||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
15532052 |
aaggaaaccaactggattcaagcagagagtacacttccttcactattagatttaaggttgagtgactgtaaactgaacaacttc---------ccatcta |
15532142 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
| |||||||| |||||||||||||||||||||||| |||||||| | || ||||||| | | ||||||||||||||||| ||||||| ||||| || | |
|
|
| T |
15532143 |
tcgagtatttgaatttgtcttcacttgtaactcttgatctttcttggaacaacttcagccatcatttaccaaatgggttttttaatctttccaaatatct |
15532242 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
| | |||||||||| || ||||||||||| || |||||||||||| || |||||||| ||||||||||||||| |||||||||||| | |||||| |
|
|
| T |
15532243 |
caattatcttgacctttcaaaaaataatatacttgatgagataccttcaagtttgctaaatcttcaaaatttgagaatccttgatctctctaataaccaa |
15532342 |
T |
|
| Q |
318 |
ctacaaggatca |
329 |
Q |
| |
|
|||||||||||| |
|
|
| T |
15532343 |
ctacaaggatca |
15532354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 18 - 329
Target Start/End: Original strand, 8459171 - 8459479
Alignment:
| Q |
18 |
aaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatcta |
117 |
Q |
| |
|
|||||||| ||||||||||||||||| ||| ||| |||| |||||||| ||||| | ||| | |||||||| |||||||| || ||| |||||| |
|
|
| T |
8459171 |
aaggaaactaattggcttcaagcagtggctacactttcttccctattagagttacacttaagtaagtgtaaactgaacaactttat---caacccatctc |
8459267 |
T |
|
| Q |
118 |
ttgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcaccaaagatat |
217 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||| |||||||| | || |||||||| ||| |||||| ||||||||| ||||||| ||||||||||| |
|
|
| T |
8459268 |
ttgagtatttgaatttgtcttcacttgtaactcttgatctttcttggaacaacttcacatctcctttacctaatgggttttttaatctgaccaaagatat |
8459367 |
T |
|
| Q |
218 |
aacctctcttgaccttgcacaaaataatatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctctgaaaaccaa |
317 |
Q |
| |
|
|||| |||||||||| | |||||||||| ||||| ||||| |||||| || |||||| |||||||||||| |||||||||||| | |||||| |
|
|
| T |
8459368 |
cacctatcttgacctttcggtttgccatatatatggcgagatgccttcaagcttgttataccttccaaatttgagacaccttgatctctcttataaccaa |
8459467 |
T |
|
| Q |
318 |
ctacaaggatca |
329 |
Q |
| |
|
|||||||||||| |
|
|
| T |
8459468 |
ctacaaggatca |
8459479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 86; Significance: 5e-41; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 111 - 329
Target Start/End: Complemental strand, 13667095 - 13666875
Alignment:
| Q |
111 |
ccatctattgagtatttcaatttgtcttcacttgtaactctttatctttctggaaataacttcacctctaatttaccaaatgggtttcttaatctcacca |
210 |
Q |
| |
|
|||||| |||||||||| ||||||||||| || ||||||||| ||||||||| ||| |||||||||||| || |||| |||| |||| |||||||||||| |
|
|
| T |
13667095 |
ccatctcttgagtatttgaatttgtcttcgctggtaactcttgatctttctgaaaacaacttcacctctcatatacctaatgagttttttaatctcacca |
13666996 |
T |
|
| Q |
211 |
aagatataacctctcttgaccttgcacaaaata--atatatatggtgagataccttctagcttgctaaaccttcaaaatttgagacatcttgatctctct |
308 |
Q |
| |
|
|| || | ||| || |||||||| |||| | || ||||||||||| | |||||||| | |||||||||| |||||| ||||||| || ||||||||| | |
|
|
| T |
13666995 |
aaaatctcaccactgttgacctttcacatagtaatatatatatggtaaaataccttcaaccttgctaaacattcaaactttgagatatattgatctcttt |
13666896 |
T |
|
| Q |
309 |
gaaaaccaactacaaggatca |
329 |
Q |
| |
|
|||||| | |||||||||||| |
|
|
| T |
13666895 |
gaaaacaacctacaaggatca |
13666875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 17 - 152
Target Start/End: Original strand, 16436087 - 16436222
Alignment:
| Q |
17 |
caaggaaaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatct |
116 |
Q |
| |
|
||||| ||||||||||||||||||| | || |||||||| || |||||||||||| ||| ||| ||||| || | ||||||||||| ||| ||| || |
|
|
| T |
16436087 |
caaggcaaccaattggcttcaagcaatggctaagcttccttccctgttagaattacaattgaattattgtaatctgagcaacttcatgaccaacccacct |
16436186 |
T |
|
| Q |
117 |
attgagtatttcaatttgtcttcacttgtaactctt |
152 |
Q |
| |
|
||||| |||| |||||| |||||||| ||||||| |
|
|
| T |
16436187 |
attgaacattttaatttgccttcacttaaaactctt |
16436222 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 23 - 152
Target Start/End: Complemental strand, 16436719 - 16436590
Alignment:
| Q |
23 |
aaccaattggcttcaagcagtaagtacccttccttcactattagaattacaactgagttactgtaaactaaacaacttcatgatcaaaccatctattgag |
122 |
Q |
| |
|
||||||||||||||||||| | || |||||||| ||||||||||||||| ||| ||| ||||| || ||||||||||| ||| ||| ||||||| |
|
|
| T |
16436719 |
aaccaattggcttcaagcaatggctaagcttccttccctattagaattacaattgaattattgtaatctttgcaacttcatgaccaacccacctattgaa |
16436620 |
T |
|
| Q |
123 |
tatttcaatttgtcttcacttgtaactctt |
152 |
Q |
| |
|
|||| |||||| |||||||| ||||||| |
|
|
| T |
16436619 |
cattttaatttgccttcacttaaaactctt |
16436590 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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