View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8005_low_11 (Length: 266)
Name: NF8005_low_11
Description: NF8005
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8005_low_11 |
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Alignment Details
Target: chr2 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 19 - 259
Target Start/End: Complemental strand, 4783470 - 4783230
Alignment:
| Q |
19 |
aaaagaccatgtttattattcacaagagtgagatgtatatacaagtggatatgcagtttcaacaagtagctgctatagtgtcaacaaactaagccttaaa |
118 |
Q |
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| T |
4783470 |
aaaagaccatgtttattattcacaagagtgagatgtatatacaagtggatatgcagtttcaacaagtagctgctatagtgtcaacaaactaagccttaaa |
4783371 |
T |
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| Q |
119 |
acacagaaagttagttgcatagggcacagctaattaactaacttaaactaattgatatatacacctaagcttgaattattaatctcaacatgctttctta |
218 |
Q |
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| T |
4783370 |
acacagaaagttagttgcatagggcacagctaactaactaacttaaactaattgttatatgcacctaagcttgaattattaatctcaacatgctttctta |
4783271 |
T |
|
| Q |
219 |
atttaaactttcaaaagctacaacacctagctttcttctca |
259 |
Q |
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||||||||||||||||||||||||||||||||||||||||| |
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| T |
4783270 |
atttaaactttcaaaagctacaacacctagctttcttctca |
4783230 |
T |
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