View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8006_high_4 (Length: 338)
Name: NF8006_high_4
Description: NF8006
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8006_high_4 |
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Alignment Details
Target: chr7 (Bit Score: 281; Significance: 1e-157; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 281; E-Value: 1e-157
Query Start/End: Original strand, 28 - 320
Target Start/End: Complemental strand, 38117816 - 38117524
Alignment:
| Q |
28 |
atcatagaggatgtgcatgatgaagtaatttgaccattaactaaatttattgaggagattataagggctgcaagtattaatgtcatttgaaaacaattga |
127 |
Q |
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| T |
38117816 |
atcatagaggatgtgcatgatgaagtaatttgaccattaactaaatttattgaggagattataagggctgctagtattaatgtcatttgaaaacaattga |
38117717 |
T |
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| Q |
128 |
gtggttccatgagtactaggtttatgttttgattaaattaaggtaagggatgattattatagtgcaatggttcaatattattttggagaagagaagtggt |
227 |
Q |
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| T |
38117716 |
gtggtttcatgagtactaggtttatgttttgattaaattaaggtaagggatgattattatagtgcaatggttcaatattattttggagaagagaagtggt |
38117617 |
T |
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| Q |
228 |
agatttgaatatataataaaggagttcaactaccttgatttttcaagtggaagagtcttatgttagtttcttctgtgttagtgttacagtttg |
320 |
Q |
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| T |
38117616 |
agatttgaatatataataaaggagttcaactaccttgatttttcaagtggaagagtcttatgttagtttcttctgtgttagttttacagtttg |
38117524 |
T |
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