View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8008_high_46 (Length: 241)
Name: NF8008_high_46
Description: NF8008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8008_high_46 |
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Alignment Details
Target: chr6 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 35094447 - 35094670
Alignment:
| Q |
1 |
aaatcaaattgtgctgatacttcttccctcacaaaggacaacttgctatctccttttctgctactggtattactgcttgcgcgtgatcttaccgaaccct |
100 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
35094447 |
aaatcaaattgtgctgatacttcttccctcacaaaggacaacttgctatctccttttctgctactggtattactgcttgtgcgtgatcttaccgaaccct |
35094546 |
T |
|
| Q |
101 |
cgtctgtattattatttgatgatgatcctttcttttgattattattatccctgttgctggtgtttgcagctactccagctccttctcctaattcttcttg |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
35094547 |
cgtctgtattattatttgatgatgatcctttcttttgattattattatccctgttgctggtgtttgcagctactccagctccttctcctaattcttcttg |
35094646 |
T |
|
| Q |
201 |
ttgtttagtttttcttcttttaac |
224 |
Q |
| |
|
|||||||||||||||||||||||| |
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|
| T |
35094647 |
ttgtttagtttttcttcttttaac |
35094670 |
T |
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