View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8008_high_52 (Length: 230)
Name: NF8008_high_52
Description: NF8008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8008_high_52 |
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Alignment Details
Target: chr3 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 2 - 218
Target Start/End: Complemental strand, 32349322 - 32349106
Alignment:
| Q |
2 |
ttgagagaaacttattggttcttgtatcttgaccatactgtgttacaaactgtgtttatagggacatgcatggatcagtagagcatcaagaagtcgaaat |
101 |
Q |
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| T |
32349322 |
ttgagagaaacttattggttcttgtatcttgaccatactgtgttacaaactgtgtttatagggacatgcatggatcagtagagcatcaagaagtcgaaat |
32349223 |
T |
|
| Q |
102 |
tcagtttggcaactaagcgaaaaacctccaggtaagctgctctgtcttatgtgcagttatcgagccagtttggttttacctgtcttgattgtttcatatt |
201 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
32349222 |
tcagtttggcaactaagcgaaaaacctccaggtaagctgctctgtcttatgtgcagttatcgagccagtttggttttacttgtcttgattgtttcatatt |
32349123 |
T |
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| Q |
202 |
ttgtctacacacaggtt |
218 |
Q |
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||||||||| ||||||| |
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| T |
32349122 |
ttgtctacatacaggtt |
32349106 |
T |
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