View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8008_high_8 (Length: 528)

Name: NF8008_high_8
Description: NF8008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8008_high_8
NF8008_high_8
[»] chr6 (43 HSPs)
chr6 (1-343)||(26863797-26864139)
chr6 (339-511)||(26876038-26876210)
chr6 (1-359)||(26951966-26952324)
chr6 (35-344)||(26826046-26826355)
chr6 (1-346)||(26648671-26649016)
chr6 (1-346)||(26754639-26754984)
chr6 (1-359)||(26886295-26886656)
chr6 (1-344)||(27681173-27681516)
chr6 (34-344)||(26979632-26979942)
chr6 (1-343)||(28794598-28794940)
chr6 (2-359)||(27425209-27425566)
chr6 (16-343)||(25513079-25513406)
chr6 (16-343)||(27602355-27602679)
chr6 (1-277)||(27528970-27529246)
chr6 (1-344)||(27608748-27609091)
chr6 (85-346)||(26850942-26851203)
chr6 (34-349)||(25076073-25076388)
chr6 (51-344)||(28788624-28788917)
chr6 (1-343)||(31286765-31287107)
chr6 (34-343)||(26961333-26961642)
chr6 (1-282)||(27675270-27675551)
chr6 (24-344)||(25581919-25582239)
chr6 (1-343)||(27590612-27590954)
chr6 (1-344)||(25547157-25547500)
chr6 (82-344)||(27662844-27663106)
chr6 (1-344)||(27716128-27716471)
chr6 (7-140)||(26658174-26658307)
chr6 (7-140)||(26764145-26764278)
chr6 (1-140)||(27704049-27704188)
chr6 (97-344)||(26145282-26145529)
chr6 (1-140)||(27696423-27696562)
chr6 (1-140)||(28788477-28788616)
chr6 (1-140)||(26804705-26804844)
chr6 (1-205)||(26637745-26637949)
chr6 (1-205)||(26743711-26743915)
chr6 (1-140)||(25485236-25485375)
chr6 (21-344)||(26058116-26058439)
chr6 (21-344)||(26078086-26078409)
chr6 (1-189)||(26145042-26145230)
chr6 (239-343)||(27703846-27703950)
chr6 (241-343)||(27696220-27696322)
chr6 (299-343)||(27675206-27675250)
chr6 (295-335)||(29828488-29828528)
[»] chr1 (4 HSPs)
chr1 (16-349)||(28125316-28125649)
chr1 (15-343)||(26138137-26138465)
chr1 (1-343)||(265960-266302)
chr1 (21-346)||(28130350-28130682)
[»] chr2 (1 HSPs)
chr2 (90-338)||(17990853-17991101)
[»] chr4 (9 HSPs)
chr4 (1-336)||(18677232-18677567)
chr4 (1-336)||(18697075-18697410)
chr4 (1-334)||(18729170-18729503)
chr4 (1-336)||(18687287-18687622)
chr4 (2-359)||(18075989-18076346)
chr4 (1-336)||(18721746-18722081)
chr4 (1-334)||(18653152-18653485)
chr4 (295-336)||(18682391-18682432)
chr4 (295-336)||(18726667-18726708)
[»] scaffold0277 (2 HSPs)
scaffold0277 (1-344)||(11282-11625)
scaffold0277 (17-343)||(2320-2646)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-359)||(61797-62154)
[»] chr8 (4 HSPs)
chr8 (15-343)||(22023479-22023808)
chr8 (1-274)||(29271537-29271810)
chr8 (85-136)||(15038975-15039026)
chr8 (315-344)||(29271467-29271496)
[»] scaffold0419 (1 HSPs)
scaffold0419 (17-343)||(9740-10066)
[»] scaffold0349 (1 HSPs)
scaffold0349 (1-344)||(15474-15817)
[»] scaffold1870 (2 HSPs)
scaffold1870 (17-183)||(1021-1187)
scaffold1870 (233-273)||(1237-1277)


Alignment Details
Target: chr6 (Bit Score: 335; Significance: 0; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 335; E-Value: 0
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 26863797 - 26864139
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26863797 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccgatcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 26863896  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  26863897 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattggcatctc 26863996  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26863997 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 26864096  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaactt 343  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  26864097 cataagagaattgtcattttcatttcaaaatctcagtgaactt 26864139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 173; E-Value: 9e-93
Query Start/End: Original strand, 339 - 511
Target Start/End: Original strand, 26876038 - 26876210
Alignment:
Q  339 aacttcgtgacctaataatatgccaagatgaaatgctcaggttttcaactcagatggaattgtcaaaattgacaaagattactgcttcatattgccgttt 438  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26876038 aacttcgtgacctaataatatgccaagatgaaatgctcaggttttcaactcagatggaattgtcaaaattgacaaagattactgcttcatattgccgttt 26876137  T
Q  439 attattgcctaatcataatgatacgttcagttccacaatgttttcaaatgtggaacatctaaatctcaaatat 511  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26876138 attattgcctaatcataatgatacgttcagttccacaatgttttcaaatgtggaacatctaaatctcaaatat 26876210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 359
Target Start/End: Original strand, 26951966 - 26952324
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| || |||| ||||||||   ||||||| ||||||| ||||||||||||||| |||| || |  |||  |  ||||  ||  ||||||    
T  26951966 cttgacattggacaatagtgactatttaactcatatacccgatgtctcaggtcttccaaatttaaaaaacttctcatttcaaggttgtgttaggttaatt 26952065  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgc-agcaagctcgagagttttccacccttacaattgacatct 199  Q
    ||||||||||| ||| |||||||||||||||||||| ||| | ||| |||  |||| ||| |||| ||| |||||||||||| ||||||| ||| | |||    
T  26952066 acaattcacaattcggttgggtacctaaataaacttaaaatcttaaatgccgagtactgcgagca-gcttgagagttttccatccttacagttgccctct 26952164  T
Q  200 cttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaactt 299  Q
    ||| ||  |||| |||||| |||||||   || |||||||| ||||||||||||||||||||||||| |||||||||||||||   | | | |||||| |    
T  26952165 cttgaggaattgaaactctctgagtgtgagagtctcaagagctttccagaattattatgcaagatgacaaatataaaagagattacgatatatgaaacat 26952264  T
Q  300 ccataagagaattgtcattttcatttcaaaatctcagtgaacttcgtgacctaataatat 359  Q
    ||||| |||||||| |||||||||||  |||||||||||||||||||  | |||||||||    
T  26952265 ccataggagaattgccattttcatttggaaatctcagtgaacttcgtcgcttaataatat 26952324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 35 - 344
Target Start/End: Original strand, 26826046 - 26826355
Alignment:
Q  35 atacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcgattgggtacctaaataaac 134  Q
    |||||| |||||||  |||||||||  |||||||| || |  |||| ||| |||| |||||||||||||||| ||| |||||||||||||||| ||||||    
T  26826046 atacccgatgtctcatgtcttccaatattagaaaaattctcatttaaaaaatgtcgtaatttaattacaattgacatctcgattgggtacctagataaac 26826145  T
Q  135 ttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaactctatgagtgtttcagact 234  Q
    |||||| | ||| |||| || |||||||||||||||||||||||||||||||||  ||| | || ||||||   ||| |||||| ||  |||   || ||    
T  26826146 ttgaaatcttaaatgcagagaattgcagcaagctcgagagttttccacccttacggttgccctcccttaaggatttgaaactctctggctgtaagagtct 26826245  T
Q  235 caagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtcattttcatttcaaaatctc 334  Q
    ||||||||||||| ||||||||||  |||||| ||| |||||||  ||  | |||| ||| ||||||||| |||||||| ||| |||||||| |||||||    
T  26826246 caagagttttccaaaattattatgtgagatgacaaaaataaaaggaatttgtttgtatgatacttccataggagaattgccatcttcatttcgaaatctc 26826345  T
Q  335 agtgaacttc 344  Q
    | ||||||||    
T  26826346 aatgaacttc 26826355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 346
Target Start/End: Original strand, 26648671 - 26649016
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| |||| ||| |||||||||||||||   ||||||  ||||||| | ||||| ||||||||||||||| |  |||||   |||| | |||||||||    
T  26648671 cttgacattgaactgttgtgaatatttaactcatatacctgatgtctcagatcttcaaaatttagaaaagttctcatttatgttttgtaagaatttaatt 26648770  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    |||||| || |||| |||||| |||||||||||||||||| | ||  ||||   | ||||||||||||| || ||||||||||||||   ||||||||||    
T  26648771 acaattgacgactcaattgggcacctaaataaacttgaaagcttagatgcaggttgttgcagcaagctcaagcgttttccacccttagggttgacatctc 26648870  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    |||||  ||||||||||  ||  |||   || || |||| ||||||||||||||||||||| |||| |||||||||| | ||    ||||||  ||||||    
T  26648871 ttaagcaattggaactcagtggttgtgagagtctaaagaattttccagaattattatgcaaaatgagaaatataaaacatatttttttgtctagaacttc 26648970  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaacttcgt 346  Q
     ||| |||||||| ||| ||||||||| ||||||||||||||||||    
T  26648971 aataggagaattgccatcttcatttcataatctcagtgaacttcgt 26649016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 1 - 346
Target Start/End: Original strand, 26754639 - 26754984
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| |||| ||| |||||||||||||||   ||||||  ||||||| | ||||| ||||||||||||||| |  |||||   |||| | |||||||||    
T  26754639 cttgacattgaactgttgtgaatatttaactcatatacctgatgtctcagatcttcaaaatttagaaaagttctcatttatgttttgtaagaatttaatt 26754738  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    |||||| || |||| |||||| |||||||||||||||||| | ||  ||||   | ||||||||||||| || ||||||||||||||   ||||||||||    
T  26754739 acaattgacgactcaattgggcacctaaataaacttgaaagcttagatgcaggttgttgcagcaagctcaagcgttttccacccttagggttgacatctc 26754838  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    |||||  ||||||||||  ||  |||   || || |||| ||||||||||||||||||||| |||| |||||||||| | ||    ||||||  ||||||    
T  26754839 ttaagcaattggaactcagtggttgtgagagtctaaagaattttccagaattattatgcaaaatgagaaatataaaacatatttttttgtctagaacttc 26754938  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaacttcgt 346  Q
     ||| |||||||| ||| ||||||||| ||||||||||||||||||    
T  26754939 aataggagaattgccatcttcatttcataatctcagtgaacttcgt 26754984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 359
Target Start/End: Original strand, 26886295 - 26886656
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||| ||| |||||||||||||||||  | ||||||||||||| ||||||| ||||||||||||||| |   ||  |||  || |||||||||||    
T  26886295 cttgacatttgacaattgtgaatatttaacccatgtacccaatgtctcaggtcttctaaatttagaaaagttctcagttgaaaagagtaataatttaatt 26886394  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||| | ||||||||| | |||||||||||||||| | ||| ||| ||| | |||| |||||| ||||||||||||||||||||  || | ||||    
T  26886395 acaattcacgattcgattgggaagctaaataaacttgaaatcttaaatgcgaagaaatgcatcaagcttgagagttttccacccttacagctgccctctc 26886494  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggtt---gtctgaaac 297  Q
    | |||  ||| ||||||| | | |||   || |||||||  || |||||||||||||||||||||| |||| ||||||||||   |||      | | ||    
T  26886495 tcaaggaatttgaactctcttattgtaggagtctcaagaaattcccagaattattatgcaagatgacaaatttaaaagagattgcgttacataataacac 26886594  T
Q  298 ttccataagagaattgtcattttcatttcaaaatctcagtgaacttcgtgacctaataatat 359  Q
    ||||||| ||| |||| ||||||||||| |||||||||||||||||||| || ||| |||||    
T  26886595 ttccataggaggattgccattttcatttgaaaatctcagtgaacttcgtcacgtaacaatat 26886656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 27681173 - 27681516
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||||||||||||||||||||   ||||||| ||||||| || ||| |||||||||||||||| | ||||| |  |||| |||||||||||    
T  27681173 cttgacattggactattgtgaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatcgtttacatgttgtgataatttaatt 27681272  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||| || |||||  |||||||||||||||||    ||| |||| |   |||||| ||||||||   ||||| ||| |||   ||| ||||||    
T  27681273 acaattcacaattctattggacacctaaataaacttgaatggttaagtgcatatggttgcagaaagctcgaacattttcgacctttagggttggcatctc 27681372  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    |||||| ||||  |||||||||||||    | ||  | | |||||||||||||||||||||||||  | |||||||||||||     | ||| | |||||    
T  27681373 ttaagaaattgatactctatgagtgtgagtgtcttgataattttccagaattattatgcaagatggcacatataaaagagattgatatatctaatacttc 27681472  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaacttc 344  Q
    |||| ||||| || ||||||||||||||||||||||||||||||    
T  27681473 cataggagaactgccattttcatttcaaaatctcagtgaacttc 27681516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 34 - 344
Target Start/End: Original strand, 26979632 - 26979942
Alignment:
Q  34 tatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcgattgggtacctaaataaa 133  Q
    ||||||||||||||| |||||   |||||||  |||||| |  |||| ||| ||||  |||||||||| |||| |||| || ||| || | ||||||||     
T  26979632 tatacccaatgtctcaggtctctaaaatttaataaagttctcatttaaaaaatgtcggaatttaattaaaattgacaattccatttggaagctaaataag 26979731  T
Q  134 cttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaactctatgagtgtttcagac 233  Q
    ||||||  | ||| ||  |||  ||||  ||||||||||||||||||||||||||| ||| | |||||||||  ||||||||||| |||||||   || |    
T  26979732 cttgaacacttaagtgtgaagggttgcctcaagctcgagagttttccacccttacatttgccctctcttaaggaattggaactctctgagtgtgatagtc 26979831  T
Q  234 tcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtcattttcatttcaaaatct 333  Q
    |||| ||||||||||||||||||||  | |||| |||||||||| ||||  |||| ||| | ||||||||| |||||||| |||||||||||||| ||||    
T  26979832 tcaaaagttttccagaattattatgtcaaatgaaaaatataaaaaagattgggttctctaatacttccataggagaattgccattttcatttcaatatct 26979931  T
Q  334 cagtgaacttc 344  Q
    |||||||||||    
T  26979932 cagtgaacttc 26979942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 28794598 - 28794940
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| | |||||||||||||||  ||||||  ||||||| ||||||| |||||| |||||||| | ||||  | |||||| ||| ||||||    
T  28794598 cttgacattggacaagtgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttggaaaagttctcgtttgcatattgtcgtaaattaatt 28794697  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||| || |||||  ||||||||||||||||||   ||| |||| |   |||||||||||||||  |||||||||| |||   ||| ||||||    
T  28794698 acaattcacaattcaattggacacctaaataaacttgaaaggttaagtgcatatggttgcagcaagctcgaacgttttccacctttagggttggcatctc 28794797  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    ||||   |||||| |||| |   |||   || ||||||| ||||||| |||||||||||||||||| |||||| ||||||||  |  | ||| | |||||    
T  28794798 ttaacgaattggatctctctttttgtgagagtctcaagaattttccaaaattattatgcaagatgacaaatatcaaagagattggtatatcttatacttc 28794897  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaactt 343  Q
    |||| |||||||| ||| ||||||||||||||||| |||||||    
T  28794898 cataggagaattgccatcttcatttcaaaatctcaatgaactt 28794940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 2 - 359
Target Start/End: Complemental strand, 27425566 - 27425209
Alignment:
Q  2 ttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatta 101  Q
    |||||||| ||| ||||| || |||||| || || |||| |||||||  | |||||||||||||||||||| | ||||  ||  |||||||||||| |||    
T  27425566 ttgatattcgacaattgtcaagatttaatctatacacccgatgtctcatggcttccaaatttagaaaagttctcgtttgcaagatgtcataatttagtta 27425467  T
Q  102 caattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctct 201  Q
    |||||||||| ||  || | |||||||||| | | |||| | ||| |||| ||  ||||   |||||||||||||||||||||||||| |   | |||||    
T  27425466 caattcacaattcacttagatacctaaatagattagaaatcttaaatgcagagggttgcgagaagctcgagagttttccacccttacagtctccctctct 27425367  T
Q  202 taagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttcc 301  Q
    | |||  |||||||||| | | |||   || |||||||||||||||||||||||||||||||||| ||||||||||   |||  ||||   |||||||||    
T  27425366 tcagaatttggaactctctaattgtaagagtctcaagagttttccagaattattatgcaagatgacaaatataaaatctatcttgttgaaggaaacttcc 27425267  T
Q  302 ataagagaattgtcattttcatttcaaaatctcagtgaacttcgtgacctaataatat 359  Q
    ||| |||||||  ||||||| ||||||||||| |||||||||||| || ||| |||||    
T  27425266 ataggagaatttccattttcctttcaaaatcttagtgaacttcgtcacttaacaatat 27425209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 16 - 343
Target Start/End: Original strand, 25513079 - 25513406
Alignment:
Q  16 ttgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcg 115  Q
    ||||||||||||||||  ||||||| ||||||| |||||||||||| |||||||||| || |||  | ||||| ||| |||||||||||||||||  |||    
T  25513079 ttgtgaatatttaacccatatacccgatgtctcgggtcttccaaatctagaaaagttcttatttcgatattgtgatagtttaattacaattcacatttcg 25513178  T
Q  116 attgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaac 215  Q
    |||||  |||||||||||||||||| | ||| | ||     ||||||||| |  |||  ||| |||||||||||  || | |||||||||| ||| |||     
T  25513179 attggacacctaaataaacttgaaatcttaaatacatgtggttgcagcaaacctgagcttttcccacccttacagctgccctctcttaagaaatttgaaa 25513278  T
Q  216 tctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtc 315  Q
    ||| || ||||   || ||||||| |||||||||||||||||| ||||||| |||||||||||| ||   | | | ||| |||||||||  ||||||| |    
T  25513279 tctctgggtgtaagagtctcaagaattttccagaattattatgtaagatgacaaatataaaagatattgagatatatgatacttccatagaagaattgcc 25513378  T
Q  316 attttcatttcaaaatctcagtgaactt 343  Q
    || ||||||||||||| |||||||||||    
T  25513379 atcttcatttcaaaatttcagtgaactt 25513406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 16 - 343
Target Start/End: Complemental strand, 27602679 - 27602355
Alignment:
Q  16 ttgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcg 115  Q
    |||| |||||||||||   |||||| ||||||| || |||||||||||||||||||| | ||||  |  |||| | |||||||||||||||||||| ||     
T  27602679 ttgtcaatatttaacccaaatacccgatgtctcaggacttccaaatttagaaaagttatcgtttcaattttgtgagaatttaattacaattcacaattca 27602580  T
Q  116 attgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaac 215  Q
     |||| | |||||| | |||||||| | ||  |||||| ||||||| ||||||| ||||| ||||||| |||||| || | | |||||||| ||||||||    
T  27602579 gttggattcctaaacagacttgaaatcttagatgcaaaatattgcatcaagctccagagtgttccacctttacaactgccctgtcttaagagattggaac 27602480  T
Q  216 tctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtc 315  Q
    ||     ||||   || |||||||||||||||||||||||||||||||||| |||| ||||||| ||  |||||  |||||||| |||    |||||  |    
T  27602479 tcgccatgtgtaagagtctcaagagttttccagaattattatgcaagatgacaaatttaaaagatatttggttgaatgaaacttgcat---ggaatttcc 27602383  T
Q  316 attttcatttcaaaatctcagtgaactt 343  Q
    ||||||| ||||||||||||||||||||    
T  27602382 attttcaattcaaaatctcagtgaactt 27602355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 277
Target Start/End: Complemental strand, 27529246 - 27528970
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    |||||||||| || |||||||||||||||||  ||||||  ||||||| || |||||||||||||||||||| | |||| |||  |||||||||||| ||    
T  27529246 cttgatattgaacaattgtgaatatttaacccatataccggatgtctcagggcttccaaatttagaaaagttctcgtttgtaagatgtcataatttagtt 27529147  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||| ||  || | |||||||||| | | |||| | ||| |||| ||  ||||   |||||||||||||||||||||||||| |   | ||||    
T  27529146 acaattcacaattcacttagatacctaaatagattagaaatcttaaatgcagagggttgcgagaagctcgagagttttccacccttacagtctccctctc 27529047  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaa 277  Q
    || |||   ||||||||| | | |||   || |||||||||||||||||||||||||||||||||| ||||||||||    
T  27529046 ttcagaatctggaactctctaattgtaagagtctcaagagttttccagaattattatgcaagatgacaaatataaaa 27528970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 27609091 - 27608748
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| |||| |||||||||||||||||||   ||||||| ||||||| || ||| |||||||||||||||| | ||||| |  |||| |||||||||||    
T  27609091 cttgacattgaactattgtgaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatcgtttacatgttgtgataatttaatt 27608992  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||| || |||||  |||||||||||||||||    ||| |||| |   |||||| ||||||||  |||||||||| |||   ||| ||||||    
T  27608991 acaattcacaattctattggacacctaaataaacttgaatggttaagtgcatatggttgcagaaagctcgaacgttttccacctttaggtttggcatctc 27608892  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    |||||| |||| | |||  ||  |||   || ||| | |||||||||||||||||||||||||||| ||| ||| |  | ||   ||||  |   |||||    
T  27608891 ttaagaaattgaatctcagtggttgtgagagtctcgatagttttccagaattattatgcaagatgacaaagatagacaatattttgttgattagtacttc 27608792  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaacttc 344  Q
    |||||||||| || ||||||||||||||||||||||||||||||    
T  27608791 cataagagaactgccattttcatttcaaaatctcagtgaacttc 27608748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 85 - 346
Target Start/End: Original strand, 26850942 - 26851203
Alignment:
Q  85 ttgtcataatttaattacaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccaccc 184  Q
    |||||||| |||||||||||||||||| || ||||||||||| | ||||||||||| | ||  ||||  |  ||||| |||||| |||||||||||||||    
T  26850942 ttgtcatagtttaattacaattcacaattcaattgggtacctgattaaacttgaaatcttagatgcatggggttgcaacaagcttgagagttttccaccc 26851041  T
Q  185 ttacaattgacatctcttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatcc 284  Q
    ||||||||| | |||||||||  ||||  | | | |  |||||  || ||||||| |||||||||||||||||||||||||| ||||||| |||||||      
T  26851042 ttacaattgccctctcttaaggaattgatattatctaggtgttcgagtctcaagaattttccagaattattatgcaagatgacaaatatagaagagattg 26851141  T
Q  285 ggttgtctgaaacttccataagagaattgtcattttcatttcaaaatctcagtgaacttcgt 346  Q
     |||   |   ||||||||| |||||||| ||| ||||||| ||||||||||||||||||||    
T  26851142 agttacatcgtacttccataggagaattgccatcttcatttaaaaatctcagtgaacttcgt 26851203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 34 - 349
Target Start/End: Original strand, 25076073 - 25076388
Alignment:
Q  34 tatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcgattgggtacctaaataaa 133  Q
    ||||||| ||||||| ||||||||||||||||||||| | |  || | ||| |||   || ||||||||||||||||| || ||||| | ||||| ||||    
T  25076073 tatacccgatgtctcaggtcttccaaatttagaaaagatctcattaaaaaagtgttggaacttaattacaattcacaattcaattggatgcctaagtaaa 25076172  T
Q  134 cttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaactctatgagtgtttcagac 233  Q
    ||||||| | ||| ||||| | | |||   |||||| | ||||||||||||||||   || | |||||||||  |||| |||| | ||||||||  || |    
T  25076173 cttgaaatcataaatgcaaggaaatgctataagctcaaaagttttccacccttacggctgccctctcttaaggaattgaaactttctgagtgttggagtc 25076272  T
Q  234 tcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtcattttcatttcaaaatct 333  Q
    |||||||||||||||||||||| |||||||||| |||| | |||   ||   ||||   |  ||||||||| |||||||| |||||||||||||||||||    
T  25076273 tcaagagttttccagaattattgtgcaagatgacaaatttgaaaagtattttgttggacggtacttccataggagaattgccattttcatttcaaaatct 25076372  T
Q  334 cagtgaacttcgtgac 349  Q
    ||||||||||||||||    
T  25076373 cagtgaacttcgtgac 25076388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 51 - 344
Target Start/End: Original strand, 28788624 - 28788917
Alignment:
Q  51 gtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcgattgggtacctaaataaacttgaaaccctaattgc 150  Q
    |||||| |||||| |||||||| | ||||  | |||||| ||| ||||||||||||||||| || |||||  ||||||||||||||||||   ||| |||    
T  28788624 gtcttcaaaatttggaaaagttctcgtttgcatattgtcgtaaattaattacaattcacaattcaattggacacctaaataaacttgaaaggttaaatgc 28788723  T
Q  151 aaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaactctatgagtgtttcagactcaagagttttccagaa 250  Q
    |    |||||||||| ||||| ||||||||||| |||   ||| |||| |||||   |||| | |||| | | |||   || ||||||||||||||| ||    
T  28788724 atttgattgcagcaaactcgaaagttttccacctttagggttggcatcccttaatgaattgaatctctctcattgtgggagtctcaagagttttccaaaa 28788823  T
Q  251 ttattatgcaagatgataaatataaaagagatccggttgtctgaa-acttccataagagaattgtcattttcatttcaaaatctcagtgaacttc 344  Q
    |||||||||||||||| |||||| ||| ||||  ||||| | ||| |||||||||||||||||| ||| ||||||||||||||||||||||||||    
T  28788824 ttattatgcaagatgacaaatattaaaaagatttggttg-cagaatacttccataagagaattgccatcttcatttcaaaatctcagtgaacttc 28788917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 1 - 343
Target Start/End: Original strand, 31286765 - 31287107
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| ||||||||||||||||   ||||||  ||||||| |||||| ||||| |||| ||||| |  |||| |  ||||   |||||||||    
T  31286765 cttgacattggacgattgtgaatatttaacacatatacctgatgtctcaggtctttcaaatatagagaagttctcatttaaattttgtagaaatttaatt 31286864  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    |||||| || | || |||||  ||| |||||||||||||  | ||| |||||    ||||||||||||| || ||||||||||||||   ||| ||||||    
T  31286865 acaattgacgattcaattggccaccaaaataaacttgaattcataagtgcaattggttgcagcaagctcaagcgttttccacccttaggtttggcatctc 31286964  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    |||||  ||||||||||| |   ||| | || ||||| |||||||||||||||||||||||||||| ||||||||||   ||   |||   | | |||||    
T  31286965 ttaaggaattggaactctctttttgtgtgagtctcaatagttttccagaattattatgcaagatgacaaatataaaacgtattttgtttgttaatacttc 31287064  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaactt 343  Q
    |||| |||||||| ||| |||||||||||||||||||||||||    
T  31287065 cataggagaattgccatcttcatttcaaaatctcagtgaactt 31287107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 34 - 343
Target Start/End: Original strand, 26961333 - 26961642
Alignment:
Q  34 tatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcgattgggtacctaaataaa 133  Q
    |||||||||||||||  | |||| |||||||  |||||| |  |||  ||||||||  || ||||||| |||| |||| || ||| || | ||||||||     
T  26961333 tatacccaatgtctcaagccttcaaaatttaataaagttctcatttgaaaattgtcgaaacttaattaaaattgacaattccatttggaagctaaataag 26961432  T
Q  134 cttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaactctatgagtgtttcagac 233  Q
    ||||||  | ||| ||| |||  ||||  ||||||||||||||||||||||||||| ||| | |||||||||  ||||||||||| | |||||   || |    
T  26961433 cttgaacacttaagtgcgaagggttgcctcaagctcgagagttttccacccttacatttgccctctcttaaggaattggaactctctaagtgtgatagtc 26961532  T
Q  234 tcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtcattttcatttcaaaatct 333  Q
    |||| ||||||||||||||||||||| | |||| |||||||||||||||     | | ||| ||||||||| |||||||  |||||||||||||| ||||    
T  26961533 tcaaaagttttccagaattattatgccaaatgacaaatataaaagagattaatctttgtgatacttccataggagaatttccattttcatttcaatatct 26961632  T
Q  334 cagtgaactt 343  Q
    ||||||||||    
T  26961633 cagtgaactt 26961642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 1 - 282
Target Start/End: Complemental strand, 27675551 - 27675270
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||||||||||| ||||||||||||||||   ||||||| ||||||| || ||| |||||||||||||||| | ||||  |  |||| |||||||||||    
T  27675551 cttgatattggaccattgtgaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatcgtttgaatgttgttataatttaatt 27675452  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||| ||||||||  ||||||| ||||||||||   ||| ||||     |||||| |||||| |  |||||||||| |||   ||| ||||||    
T  27675451 acaattcacaattcgattggacacctaaacaaacttgaaaggttaagtgcatttggttgcagaaagctcaaacgttttccacctttagggttggcatctc 27675352  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagat 282  Q
    |||||  | ||||  ||| |   ||||  || |||||||||||||||||||||||||||||||||| |||||| ||||||||    
T  27675351 ttaaggaactggatatctgttgttgttcgagtctcaagagttttccagaattattatgcaagatgacaaatatcaaagagat 27675270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 24 - 344
Target Start/End: Original strand, 25581919 - 25582239
Alignment:
Q  24 atttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcgattgggta 123  Q
    ||||||||  ||||||| ||||||| |||||||||||| |||||||||  |  |||  |  ||||  || |||||||||||||||||  ||||||||  |    
T  25581919 atttaacccatatacccgatgtctcgggtcttccaaatctagaaaagtgctcatttcaattttgttttagtttaattacaattcacagttcgattggaca 25582018  T
Q  124 cctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaactctatgag 223  Q
    ||||||||||||||||| | ||| |||| |   ||||||||| || |||  ||| |||||||||||  || | |||||||||| ||| ||| ||| | ||    
T  25582019 cctaaataaacttgaaatcttaaatgcatatggttgcagcaaacttgagcatttcccacccttacagctgccctctcttaagaaatttgaaatctctaag 25582118  T
Q  224 tgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtcattttcat 323  Q
    |||   || ||||||| |||||||||||||||||||||||||| |||||||||||| |||  | | | ||  | |||||||  ||||||| ||| |||||    
T  25582119 tgtgagagtctcaagaattttccagaattattatgcaagatgagaaatataaaagatatcaagatatatgccatttccatagaagaattgccatattcat 25582218  T
Q  324 ttcaaaatctcagtgaacttc 344  Q
    |||||||| ||||||||||||    
T  25582219 ttcaaaatttcagtgaacttc 25582239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 1 - 343
Target Start/End: Complemental strand, 27590954 - 27590612
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||||||||||| ||||||||||||||||   ||||||| ||||||| || ||| |||||||||||||||| |  |||  | ||||| | |||||||||    
T  27590954 cttgatattggaccattgtgaatatttaacacatatacccgatgtctcagggctttcaaatttagaaaagttatcatttgaatattgtaagaatttaatt 27590855  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||| ||||||||  ||||||||||||||||||   ||| ||||     |||||| | |||| |  |||||||||| |||   ||| ||||||    
T  27590854 acaattcacaattcgattggacacctaaataaacttgaaaggttaagtgcatttggttgcaggacgctcaaacgttttccacctttagggttggcatctc 27590755  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    ||||   |||| | || | |   ||||  || ||||| ||||||||| |||||||||||||||||| ||||||| |  ||||  |||| |   | |||||    
T  27590754 ttaaagaattgaagctttcttgttgttatagtctcaaaagttttccaaaattattatgcaagatgacaaatatagacaagatttggttttggtatacttc 27590655  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaactt 343  Q
    |||| |||||||| ||| |||||||||||||||||||||||||    
T  27590654 catacgagaattgccatcttcatttcaaaatctcagtgaactt 27590612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 25547157 - 25547500
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||||||||||   ||||||||||||||||  ||||||  ||||||| ||||||| |||| |||||||||  |  |||  | | ||||||| |||||||    
T  25547157 cttgatattggatctttgtgaatatttaacccatatacctgatgtctcgggtcttcgaaatctagaaaagtgctcctttcgagaatgtcatagtttaatt 25547256  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||  ||||||||  |||||||||||||||||| | ||| |||| |   ||||    |||| |||  ||| |||||||||||  || | ||||    
T  25547257 acaattcacagttcgattggacacctaaataaacttgaaatcttaaatgcatatggttgcttagagcttgagcatttcccacccttacagctgccctctc 25547356  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    |||||| ||| ||| ||| | | |||   || ||||||| |||||||||||||||||||||||||| |||||||||||| |||  | | | ||| |||||    
T  25547357 ttaagaaatttgaaatctcttattgtgagagtctcaagaattttccagaattattatgcaagatgacaaatataaaagatatcaagatatatgatacttc 25547456  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaacttc 344  Q
     |||  ||||||| | | ||||||||||||| ||||||||||||    
T  25547457 tatagaagaattgccgtattcatttcaaaatttcagtgaacttc 25547500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 82 - 344
Target Start/End: Complemental strand, 27663106 - 27662844
Alignment:
Q  82 aaattgtcataatttaattacaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttcca 181  Q
    ||||||| | ||||||| |||||||||||| ||  ||||||||||  |||||||||||| | ||  ||| |     ||||| |||||| |||||||||||    
T  27663106 aaattgtaaaaatttaactacaattcacaattcagttgggtacctttataaacttgaaatcttagatgcgaccatgtgcaggaagctcaagagttttcca 27663007  T
Q  182 cccttacaattgacatctcttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagaga 281  Q
    ||||||    || | |||||||||| |||||||||| ||   |||   || |||||||||||||||||||||||||||||||||  ||||||||||||||    
T  27663006 cccttatgtctgccgtctcttaagaaattggaactccatttttgtaggagtctcaagagttttccagaattattatgcaagatgtcaaatataaaagaga 27662907  T
Q  282 tccggttgtctgaaacttccataagagaattgtcattttcatttcaaaatctcagtgaacttc 344  Q
    |  |||| | ||| |||||||||  |||| || ||||||||||| ||||||||| ||||||||    
T  27662906 tttggttatgtgatacttccatagaagaaatgccattttcatttaaaaatctcaatgaacttc 27662844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 27716471 - 27716128
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    |||||||||||||   ||| ||||||||||   ||||||| ||||||| || ||| |||||||||||||||| | ||||  ||  ||| |||||||||||    
T  27716471 cttgatattggaccgatgtaaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatcgtttgaaagatgttataatttaatt 27716372  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||| ||||||||  |||| |||||||||||||   ||| |||| |   |||||  ||| ||||   ||||||||| |||   ||| ||||||    
T  27716371 acaattcacaattcgattggacaccttaataaacttgaaaggttaagtgcatatggttgcaataaggtcgaacattttccacctttaggtttggcatctc 27716272  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    |||||  |||| | |||  |   ||    || |||||||||||||||||||||||||||||||||| ||||||| |  | ||  |||||| | | |||||    
T  27716271 ttaaggaattgaatctcagttcttgcaggagtctcaagagttttccagaattattatgcaagatgacaaatatagacaatatttggttgtgtaatacttc 27716172  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaacttc 344  Q
    |||| ||||| || ||||||||||||||||||| ||||||||||    
T  27716171 cataggagaactgccattttcatttcaaaatcttagtgaacttc 27716128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 26658174 - 26658307
Alignment:
Q  7 attggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaatt 106  Q
    ||||||| |||||||||||||||||  ||||||||||||||| |||||  |||||||||||||||| |  |||  |||||||  ||||||||||||||||    
T  26658174 attggacgattgtgaatatttaacccatatacccaatgtctcaggtctctcaaatttagaaaagttctcatttcgaaattgtgctaatttaattacaatt 26658273  T
Q  107 cacaactcgattgggtacctaaataaacttgaaa 140  Q
    ||||| ||  |||| |||||||||||||||||||    
T  26658274 cacaattcagttggatacctaaataaacttgaaa 26658307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 7 - 140
Target Start/End: Original strand, 26764145 - 26764278
Alignment:
Q  7 attggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaatt 106  Q
    ||||||| |||||||||||||||||  ||||||||||||||| |||||  |||||||||||||||| |  |||  |||||||  ||||||||||||||||    
T  26764145 attggacgattgtgaatatttaacccatatacccaatgtctcaggtctctcaaatttagaaaagttctcatttcgaaattgtgctaatttaattacaatt 26764244  T
Q  107 cacaactcgattgggtacctaaataaacttgaaa 140  Q
    ||||| ||  |||| |||||||||||||||||||    
T  26764245 cacaattcagttggatacctaaataaacttgaaa 26764278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 27704188 - 27704049
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| ||||| ||||||||||   ||||||| ||||||| || ||| |||||||||||||||| | ||||  | ||||| |||||||||||    
T  27704188 cttgacattggaccattgtaaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatcgtttgaatattgtgataatttaatt 27704089  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaa 140  Q
    || |||||||| ||||||||  ||||||||||||||||||    
T  27704088 acgattcacaattcgattggccacctaaataaacttgaaa 27704049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 97 - 344
Target Start/End: Original strand, 26145282 - 26145529
Alignment:
Q  97 aattacaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgaca 196  Q
    ||||||||||||||||||||||||  |||||||||||||||||| | ||| | ||    |||||  ||| || |||  ||| |||||||||||  || |     
T  26145282 aattacaattcacaactcgattggacacctaaataaacttgaaatcttaaatacatctaattgcctcaaacttgagcatttcccacccttacagctgccc 26145381  T
Q  197 tctcttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaa 296  Q
    |||||||||| ||| ||| ||| ||  |||   || ||||||| |||||||||||||||||| ||||||| |||||||||||| ||   | | | ||| |    
T  26145382 tctcttaagaaatttgaaatctctggttgtgagagtctcaagaattttccagaattattatgtaagatgacaaatataaaagatattgagatatatgata 26145481  T
Q  297 cttccataagagaattgtcattttcatttcaaaatctcagtgaacttc 344  Q
    ||||||||  |||||||  || ||||||||||||| ||||||||||||    
T  26145482 cttccatagaagaattgcgatattcatttcaaaatttcagtgaacttc 26145529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Complemental strand, 27696562 - 27696423
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| ||||||||||||||||   ||||||| |||||||  | ||| |||||||||||||||| | ||||  | ||||| | |||||||||    
T  27696562 cttgacattggacgattgtgaatatttaacacatatacccgatgtctcaagcctttcaaatttagaaaagttatcgtttgaacattgtaagaatttaatt 27696463  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaa 140  Q
    ||||||||||| ||||||||  |||||| |||||||||||    
T  27696462 acaattcacaattcgattggacacctaagtaaacttgaaa 27696423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 28788477 - 28788616
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| | |||||||||||||||  ||||||  ||||||| ||||||| |||||| |||||||| | ||||  | |||||| ||| ||||||    
T  28788477 cttgacattggacaagtgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttggaaaagttctcgtttgcatattgtcgtaaattaatt 28788576  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaa 140  Q
    ||||||||||| || |||||  ||||||||||||||||||    
T  28788577 acaattcacaattcaattggacacctaaataaacttgaaa 28788616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 26804705 - 26804844
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| ||  |||||||||||||   |||||  || |||| ||||||| ||||||||||||||| | ||||| | ||||| | |||||||||    
T  26804705 cttgacattggacgataatgaatatttaacccacatacctgatctctcaggtcttcaaaatttagaaaagttctcgtttaaatattgtgagaatttaatt 26804804  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaa 140  Q
    |||||| |||| ||||||||  ||||||||||||||||||    
T  26804805 acaattgacaattcgattggacacctaaataaacttgaaa 26804844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 26637745 - 26637949
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| |||| || ||||| | ||||||||   ||||||| ||||||| |||||  ||||||| |||||||| | ||||| ||| ||| | |||| ||||    
T  26637745 cttgacattgaaccattgtcactatttaactcatatacccgatgtctcaggtctatcaaattttgaaaagttctcgtttaaaaagtgtaaaaattgaatt 26637844  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||| | ||||||||| | |||| ||||||| ||| | ||| ||||||  |||||| |  ||| |||||||||||||||||||  ||| | ||||    
T  26637845 acaattcacgattcgattgggcagctaagtaaacttaaaatcttaaatgcaaaaaattgcaactcgctagagagttttccacccttacggttgccctctc 26637944  T
Q  201 ttaag 205  Q
    |||||    
T  26637945 ttaag 26637949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 205
Target Start/End: Original strand, 26743711 - 26743915
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| |||| || ||||| | ||||||||   ||||||| ||||||| |||||  ||||||| |||||||| | ||||| ||| ||| | |||| ||||    
T  26743711 cttgacattgaaccattgtcactatttaactcatatacccgatgtctcaggtctatcaaattttgaaaagttctcgtttaaaaagtgtaaaaattgaatt 26743810  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||| | ||||||||| | |||| ||||||| ||| | ||| ||||||  |||||| |  ||| |||||||||||||||||||  ||| | ||||    
T  26743811 acaattcacgattcgattgggcagctaagtaaacttaaaatcttaaatgcaaaaaattgcaactcgctagagagttttccacccttacggttgccctctc 26743910  T
Q  201 ttaag 205  Q
    |||||    
T  26743911 ttaag 26743915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 1 - 140
Target Start/End: Original strand, 25485236 - 25485375
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| |||||| | ||||||||||||||||  ||||||| ||||||| |||||||||||| |||||||||  |  |||  | |||||  || |||||||    
T  25485236 cttgacattggatttttgtgaatatttaacccatatacccgatgtctcgggtcttccaaatctagaaaagtgctcatttcgatattgttttagtttaatt 25485335  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaa 140  Q
    ||||||| ||  ||||||||  ||||||||||||||||||    
T  25485336 acaattcccagttcgattggacacctaaataaacttgaaa 25485375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 344
Target Start/End: Original strand, 26058116 - 26058439
Alignment:
Q  21 aatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcgattgg 120  Q
    |||||||||||  ||||||| ||||||| |||||||||||| |||||||||  |  |||  |   ||| ||| |||||||| ||||||||  ||||||||    
T  26058116 aatatttaacccatatacccgatgtctcaggtcttccaaatctagaaaagtgctcctttcgaggatgtgatagtttaattaaaattcacagttcgattgg 26058215  T
Q  121 gtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaactctat 220  Q
      | |||||||||||||||| | ||  | ||     ||||||| | || |||  ||| |||||||||||  || | |||||||||| ||| ||| ||  |    
T  26058216 acatctaaataaacttgaaatcttagatacatttggttgcagcgaacttgagcatttcccacccttacagctgccctctcttaagaaatttgaaatcact 26058315  T
Q  221 gagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtcatttt 320  Q
    || ||| | || ||||||| ||||||||||||||||||  |||||| |||||||||||| ||   | | | ||| |||||||||  ||||||| ||| ||    
T  26058316 gattgtgtgagtctcaagaattttccagaattattatgtgagatgacaaatataaaagatattgagatatatgatacttccatagaagaattgccatatt 26058415  T
Q  321 catttcaaaatctcagtgaacttc 344  Q
    ||||||||||| ||||| ||||||    
T  26058416 catttcaaaatttcagtaaacttc 26058439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 21 - 344
Target Start/End: Original strand, 26078086 - 26078409
Alignment:
Q  21 aatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcgattgg 120  Q
    |||||||||||  ||||||| ||||||| |||||||||||| |||||||||  |  |||  |   ||| ||| |||||||| ||||||||  ||||||||    
T  26078086 aatatttaacccatatacccgatgtctcaggtcttccaaatctagaaaagtgctcctttcgaggatgtgatagtttaattaaaattcacagttcgattgg 26078185  T
Q  121 gtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaactctat 220  Q
      | |||||||||||||||| | ||  | ||     ||||||| | || |||  ||| |||||||||||  || | |||||||||| ||| ||| ||  |    
T  26078186 acatctaaataaacttgaaatcttagatacatttggttgcagcgaacttgagcatttcccacccttacagctgccctctcttaagaaatttgaaatcact 26078285  T
Q  221 gagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtcatttt 320  Q
    || ||| | || ||||||| ||||||||||||||||||  |||||| |||||||||||| ||   | | | ||| |||||||||  ||||||| ||| ||    
T  26078286 gattgtgtgagtctcaagaattttccagaattattatgtgagatgacaaatataaaagatattgagatatatgatacttccatagaagaattgccatatt 26078385  T
Q  321 catttcaaaatctcagtgaacttc 344  Q
    ||||||||||| ||||| ||||||    
T  26078386 catttcaaaatttcagtaaacttc 26078409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 189
Target Start/End: Original strand, 26145042 - 26145230
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| |||| |||||| |  ||||||||||  ||||||| ||||||| |||||||||||| |||||||||  |  |||  ||| ||| | | |||||||    
T  26145042 cttgacattgaactattctcgatatttaacccatatacccgatgtctcaggtcttccaaatctagaaaagtgctcctttcaaaactgtgaaagtttaatt 26145141  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttaca 189  Q
    | ||||||||  ||||||||  |||||||||||||||||| | ||| ||||     |||||||||||| |||  |||||||||||||||    
T  26145142 agaattcacagttcgattggacacctaaataaacttgaaatcttaaatgcatctggttgcagcaagcttgagcattttccacccttaca 26145230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 343
Target Start/End: Complemental strand, 27703950 - 27703846
Alignment:
Q  239 agttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtcattttcatttcaaaatctcagtg 338  Q
    |||||||||||||||||||||||||||| ||||||| |  | ||  |||||    | ||||| ||| ||||| || ||||||||||||||||||||||||    
T  27703950 agttttccagaattattatgcaagatgacaaatatagataatatttggttgcagcatacttctataggagaactgccattttcatttcaaaatctcagtg 27703851  T
Q  339 aactt 343  Q
    |||||    
T  27703850 aactt 27703846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 241 - 343
Target Start/End: Complemental strand, 27696322 - 27696220
Alignment:
Q  241 ttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtcattttcatttcaaaatctcagtgaa 340  Q
    |||||||||||||||||||||||||  | |||||||||||||     | | | | | ||||||| || || || ||||||||||||||||||||||||||    
T  27696322 ttttccagaattattatgcaagatggcacatataaaagagattgatatattttatatttccataggaaaactgccattttcatttcaaaatctcagtgaa 27696223  T
Q  341 ctt 343  Q
    |||    
T  27696222 ctt 27696220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 299 - 343
Target Start/End: Complemental strand, 27675250 - 27675206
Alignment:
Q  299 tccataagagaattgtcattttcatttcaaaatctcagtgaactt 343  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||    
T  27675250 tccataggagaattgccatcttcatttcaaaatctcagtgaactt 27675206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 295 - 335
Target Start/End: Original strand, 29828488 - 29828528
Alignment:
Q  295 aacttccataagagaattgtcattttcatttcaaaatctca 335  Q
    ||||||||||| ||||||| |||||||||||||||||||||    
T  29828488 aacttccataaaagaattgccattttcatttcaaaatctca 29828528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 146; Significance: 1e-76; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 16 - 349
Target Start/End: Complemental strand, 28125649 - 28125316
Alignment:
Q  16 ttgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcg 115  Q
    ||||||||||||||||  ||||||| |||||||   ||||||||||||||||||||| |  |||  | ||||| |||||||||||||||||||||| |||    
T  28125649 ttgtgaatatttaacccatatacccgatgtctcacatcttccaaatttagaaaagttctcatttgcatattgtgataatttaattacaattcacaattcg 28125550  T
Q  116 attgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaac 215  Q
    ||||||||||||||||||||||||  | ||  |||| |   |||||||||||||||||||||||| |||||||| ||||| | |||||||  |||| |||    
T  28125549 attgggtacctaaataaacttgaagtcttagatgcagaaggttgcagcaagctcgagagttttccccccttacagttgacctgtcttaaggaattgaaac 28125450  T
Q  216 tctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtc 315  Q
    ||  ||| |||   || |||||||||||||||||||||||| ||||||||| ||||||| |||||||  |||||  || ||||||||||||||||||  |    
T  28125449 tcagtgaatgtgagagtctcaagagttttccagaattattaggcaagatgacaaatatagaagagatttggttgcgtggaacttccataagagaattacc 28125350  T
Q  316 attttcatttcaaaatctcagtgaacttcgtgac 349  Q
    ||||||||||||||||||||||||||||||||||    
T  28125349 attttcatttcaaaatctcagtgaacttcgtgac 28125316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 15 - 343
Target Start/End: Original strand, 26138137 - 26138465
Alignment:
Q  15 attgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactc 114  Q
    ||||| ||||||||||   | ||||| ||||||| ||||||| ||||||||||||||| |  |||  ||||||| | |||||||||||||||||||| ||    
T  26138137 attgtcaatatttaactgatctacccgatgtctcaggtcttcaaaatttagaaaagttctcatttgaaaattgtaacaatttaattacaattcacaattc 26138236  T
Q  115 gattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaa 214  Q
     ||||||| ||||||||||||||||||| ||| |||||||  ||||| ||||||||||||||||||||||||||| ||||| |||||||||| |||||||    
T  26138237 aattgggttcctaaataaacttgaaaccttaaatgcaaagggttgcatcaagctcgagagttttccacccttacagttgacctctcttaagaaattggaa 26138336  T
Q  215 ctctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgt 314  Q
    |||| |   |||   || ||||||||||||||||||||| |  | | | ||| |||||||||||| ||  |||||| || ||| |||||| ||||||||     
T  26138337 ctctctatttgtaagagtctcaagagttttccagaattagttggtaggttgacaaatataaaagacatttggttgtatggaacctccataggagaattgc 26138436  T
Q  315 cattttcatttcaaaatctcagtgaactt 343  Q
    ||||||||||||||||| |||||||||||    
T  26138437 cattttcatttcaaaatttcagtgaactt 26138465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 9e-56
Query Start/End: Original strand, 1 - 343
Target Start/End: Complemental strand, 266302 - 265960
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||||||| ||| |||||||||||||||||  |||| |  ||||||| || ||||| |||||| ||||| | |  |||| | ||||| | |||||||||    
T  266302 cttgatattagaccattgtgaatatttaacccatatatctgatgtctcaggacttcctaatttaaaaaagctctcatttaaagattgtaagaatttaatt 266203  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||| ||  |||||||||||| ||||||||||| | ||  ||||| |  |||||| |||||  |||||||||||||||||||| || | ||||    
T  266202 acaattcacaattcagttgggtacctaattaaacttgaaatcttagatgcaatgggttgcagaaagctaaagagttttccacccttacaactgccctctc 266103  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    |||||  | ||||||||| || |||||  || ||||| || |||||| |||||||||||||||||| ||||||| || | ||   ||||| |||||||||    
T  266102 ttaaggaaatggaactctctgggtgttggagtctcaatagctttccaaaattattatgcaagatgacaaatatagaaaatattttgttgtatgaaacttc 266003  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaactt 343  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||    
T  266002 cataagagaattgccatcttcatttcaaaatctcagtggactt 265960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 21 - 346
Target Start/End: Complemental strand, 28130682 - 28130350
Alignment:
Q  21 aatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcg----- 115  Q
    |||||||||||  |||||||||||||||   ||||||||||||||||||||| |  |||  ||||||| |||||||||||||||||||||| ||          
T  28130682 aatatttaaccaatatacccaatgtctcacatcttccaaatttagaaaagttctcatttgaaaattgtgataatttaattacaattcacaattcacaatt 28130583  T
Q  116 --attgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattgga 213  Q
      ||||||||||||||||||||||||  | ||| |||||||  |||||| |||||| ||| |||||| |||||||  ||||| |||||||||  ||||||    
T  28130582 ctattgggtacctaaataaacttgaagtcttaaatgcaaagggttgcaggaagctcaagaattttccccccttacggttgacttctcttaaggaattgga 28130483  T
Q  214 actctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattg 313  Q
    ||||   || |||   || ||||| |  ||||||||||||||| ||||| ||| ||||||| |||||||  |||||  |||||||||||||||||||||     
T  28130482 actcagggaatgtgagagtctcaaaaaatttccagaattattaggcaagttgacaaatatacaagagattaggttgagtgaaacttccataagagaatta 28130383  T
Q  314 tcattttcatttcaaaatctcagtgaacttcgt 346  Q
     ||||||||||||||||||| ||||||||||||    
T  28130382 ccattttcatttcaaaatctaagtgaacttcgt 28130350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 101; Significance: 8e-50; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 90 - 338
Target Start/End: Complemental strand, 17991101 - 17990853
Alignment:
Q  90 ataatttaattacaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttaca 189  Q
    |||||||||||||||||||| | |||||||||||||||||||||||||||| | ||| |||| ||  ||| |||||||||||||||||||| ||||||||    
T  17991101 ataatttaattacaattcacgattcgattgggtacctaaataaacttgaaatcttaaatgcacagggttgtagcaagctcgagagttttcctcccttaca 17991002  T
Q  190 attgacatctcttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttg 289  Q
     ||| |||||||||||| ||||||||| | |   |||   |  || ||||||||||||||||||||||||||||||| ||| ||| || | ||  |||||    
T  17991001 gttggcatctcttaagaaattggaactatctagatgtaggaacctaaagagttttccagaattattatgcaagatgacaaagatagaacatatttggttg 17990902  T
Q  290 tctgaaacttccataagagaattgtcattttcatttcaaaatctcagtg 338  Q
     | || | ||||||| |||||||| ||||||||||||||||||||||||    
T  17990901 gcagatagttccataggagaattgccattttcatttcaaaatctcagtg 17990853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 100; Significance: 3e-49; HSPs: 9)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 18677567 - 18677232
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| |||||||||||||  ||||||||||  ||||||||||||||| |||||||||||||||||||| || | ||||  |  |||| |||||||||||    
T  18677567 cttgacattggactattgtctatatttaacccatatacccaatgtctcaggtcttccaaatttagaaaaattctcgtttcgattttgtgataatttaatt 18677468  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
     |||||||| | ||||||||| |||||||||||||||||| | ||| ||||  |   |||| |||||| |||| |||||||||||||    || | ||||    
T  18677467 gcaattcacgattcgattgggaacctaaataaacttgaaatcttaaatgcatgggcatgcaccaagcttgagaattttccacccttatggctgccctctc 18677368  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    | |||  |||||| |||| |   |||   ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||  |  ||| |  ||||||    
T  18677367 tgaaggaattggacctctctttttgtaagagactcaagagttttccagaattattatgtaagatgacaaatacaaaagagattggaatgtgtataacttc 18677268  T
Q  301 cataagagaattgtcattttcatttcaaaatctcag 336  Q
    || || ||||||| ||||||||||||||||||||||    
T  18677267 cacaacagaattgccattttcatttcaaaatctcag 18677232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 18697410 - 18697075
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| ||||| |||||||||||  ||||||||||||||| |||||||||||||||||| | || | ||||  ||| ||| | |||||||||    
T  18697410 cttgacattggacaattgtcaatatttaacccatatacccaatgtctcaggtcttccaaatttagaagaattctcgtttgaaaaatgtaacaatttaatt 18697311  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
     |||||||| | |||||| || |||||||||||||||||| | ||| ||||      ||||||||||| ||||||||||||||||||    || | ||||    
T  18697310 gcaattcacgattcgattaggaacctaaataaacttgaaatcataaatgcatgtggatgcagcaagcttgagagttttccacccttatggctgccctctc 18697211  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    | |||  ||||||  ||| | | |||   ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||  |  ||| |  ||||||    
T  18697210 tgaaggaattggacatctcttattgtaggagactcaagagttttccagaattattatgtaagatgacaaatacaaaagagattggaatgtgtacaacttc 18697111  T
Q  301 cataagagaattgtcattttcatttcaaaatctcag 336  Q
    || |||||||||| ||||||||||||||||||||||    
T  18697110 cacaagagaattgccattttcatttcaaaatctcag 18697075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 98; E-Value: 5e-48
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 18729503 - 18729170
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| | ||| |||||||||||  ||||||||||||||| |||||||||||||||||||| || | ||||  | ||||| | |||||||||    
T  18729503 cttgacattggacaagtgtcaatatttaacccatatacccaatgtctcaggtcttccaaatttagaaaaattctcgtttcaatattgtgacaatttaatt 18729404  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
     |||||||| | ||||||||| | |||||||||||||||| | ||| ||||  |   |||| |||||| |||| |||||||||||| |   || | ||||    
T  18729403 gcaattcacgattcgattgggaagctaaataaacttgaaatcttaaatgcatggggatgcatcaagcttgagaattttccacccttgcggctgccctctc 18729304  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    |||||  |||||| |||  | | |||   ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||  |  ||| | |||||||    
T  18729303 ttaaggaattggacctcacttattgtaagagactcaagagttttccagaattattatgtaagatgacaaatacaaaagagattggaatgtgtaaaacttc 18729204  T
Q  301 cataagagaattgtcattttcatttcaaaatctc 334  Q
    || |||||||||| |||||||||||||| |||||    
T  18729203 cacaagagaattgccattttcatttcaatatctc 18729170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 8e-47
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 18687622 - 18687287
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| ||||| |||||||||||  ||||||||||||||  |||||||||||||||||| | || | ||||  | ||||| |||||||||||    
T  18687622 cttgacattggacaattgtcaatatttaacccatatacccaatgtcttaggtcttccaaatttagaataattctcgttttaatattgtaataatttaatt 18687523  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
     |||||||| | |||||| || |||||||||||||||||| | ||| ||||      ||||| ||||| ||||||||||||||||||    || | ||||    
T  18687522 gcaattcacgattcgatttggaacctaaataaacttgaaatcataaatgcatgtggatgcagtaagcttgagagttttccacccttatggctgccctctc 18687423  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    | |||  ||||||  ||| | | |||   ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||  |  ||| |  ||||||    
T  18687422 tgaaggaattggacatctcttattgtaggagactcaagagttttccagaattattatgtaagatgacaaatacaaaagagattggaatgtgtataacttc 18687323  T
Q  301 cataagagaattgtcattttcatttcaaaatctcag 336  Q
    || |||||||||| ||||||||||||||||||||||    
T  18687322 cacaagagaattgccattttcatttcaaaatctcag 18687287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 2 - 359
Target Start/End: Original strand, 18075989 - 18076346
Alignment:
Q  2 ttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatta 101  Q
    |||||||| ||| ||||| || |||||| || || |||| |||||||  | |||||||||||||||||||| | ||||  ||  |||||||||||| |||    
T  18075989 ttgatattcgacaattgtcaagatttaatctatacacccgatgtctcatggcttccaaatttagaaaagttctcgtttgcaagatgtcataatttagtta 18076088  T
Q  102 caattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctct 201  Q
    |||||||||| ||  || | |||||||||| | | |||| | ||| |||| ||  ||||   |||||||||||||||||||||||||| |   | |||||    
T  18076089 caattcacaattcacttagatacctaaatagattagaaatcttaaatgcagagggttgcgagaagctcgagagttttccacccttacagtctccctctct 18076188  T
Q  202 taagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttcc 301  Q
    | |||  |||||||||| | | |||   || |||||||||||||||||||||||||||||||||| ||||||||||   |||  ||||   |||||||||    
T  18076189 tcagaatttggaactctctaattgtaagagtctcaagagttttccagaattattatgcaagatgacaaatataaaatctatcttgttgaaggaaacttcc 18076288  T
Q  302 ataagagaattgtcattttcatttcaaaatctcagtgaacttcgtgacctaataatat 359  Q
    ||| |||||||  ||||||| ||||||||||| |||||||||||| || ||| |||||    
T  18076289 ataggagaatttccattttcctttcaaaatcttagtgaacttcgtcacttaacaatat 18076346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 336
Target Start/End: Complemental strand, 18722081 - 18721746
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| | ||| |||||||||||  ||||||||||||||| |||||||||||||||||||| || | ||||  |  |||| |||||||||||    
T  18722081 cttgacattggacaagtgtcaatatttaacccatatacccaatgtctcaggtcttccaaatttagaaaaattctcgtttcgattttgtgataatttaatt 18721982  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
     || ||||| | ||||||||| |||||||||||||||||| | ||| ||||      |||| |||||| ||||||||||||||||||    || | ||||    
T  18721981 gcagttcacgattcgattgggaacctaaataaacttgaaatcttaaatgcatctggatgcatcaagcttgagagttttccacccttatggctgccctctc 18721882  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    || ||  |||||| |||| |   |||   ||||||||||||||||||||| ||||||| ||||||| ||||| ||||| |||  |  ||| |  ||||||    
T  18721881 ttgaggaattggacctctctttttgtgagagactcaagagttttccagaactattatgtaagatgacaaatacaaaagcgattggaatgtgtataacttc 18721782  T
Q  301 cataagagaattgtcattttcatttcaaaatctcag 336  Q
    || |||||||||| ||||||||||||||||||||||    
T  18721781 cacaagagaattgccattttcatttcaaaatctcag 18721746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 86; E-Value: 7e-41
Query Start/End: Original strand, 1 - 334
Target Start/End: Complemental strand, 18653485 - 18653152
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| ||||| |||||||||||  ||||||||||||||  |||||||| ||||||||| | || | ||||  |  ||||  ||||||||||    
T  18653485 cttgacattggacaattgtcaatatttaacccatatacccaatgtcttaggtcttcctaatttagaataattctcgtttcaattttgtattaatttaatt 18653386  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
     |||||||| | ||||||||| |||||||||||||||||| | ||| ||||  |   ||||| ||||| ||||||||||||||||||    || | ||||    
T  18653385 gcaattcacgattcgattgggaacctaaataaacttgaaatcataaatgcatggggatgcaggaagcttgagagttttccacccttatggctgccctctc 18653286  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    |||||  ||||||  ||| | | |||   ||||||||| ||||||||||| ||||||| ||||||| ||||| |||||||||  |  ||| |  ||||||    
T  18653285 ttaaggaattggacgtctcttattgtaagagactcaagtgttttccagaactattatgtaagatgacaaatacaaaagagattggaatgtgtataacttc 18653186  T
Q  301 cataagagaattgtcattttcatttcaaaatctc 334  Q
    || |||||||||| ||||||||||||||||||||    
T  18653185 cacaagagaattgccattttcatttcaaaatctc 18653152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 18682432 - 18682391
Alignment:
Q  295 aacttccataagagaattgtcattttcatttcaaaatctcag 336  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  18682432 aacttccataagagaattgccattttcatttcaaaatctcag 18682391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 295 - 336
Target Start/End: Complemental strand, 18726708 - 18726667
Alignment:
Q  295 aacttccataagagaattgtcattttcatttcaaaatctcag 336  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  18726708 aacttccataagagaattgccattttcatttcaaaatctcag 18726667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 1 - 344
Target Start/End: Complemental strand, 11625 - 11282
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    ||||| ||||||| | |||||||||||||||  ||||||  ||||||| ||||||| |||||| |||||||| | ||||  | |||||| ||| ||||||    
T  11625 cttgacattggacaagtgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttggaaaagttctcgtttgcatattgtcgtaaattaatt 11526  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||| || |||||  ||||||||||||||||||   ||| ||||    |||||||||| ||||| ||||||||||| |||   ||| |||| |    
T  11525 acaattcacaattcaattggacacctaaataaacttgaaaggttaaatgcatttgattgcagcaaactcgaaagttttccacctttagggttggcatccc 11426  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaa-actt 299  Q
    ||||   |||| | |||| | | |||   || ||||||||||||||| |||||||||||||||||| |||||| ||| ||||  ||||| | ||| ||||    
T  11425 ttaatgaattgaatctctctcattgtgggagtctcaagagttttccaaaattattatgcaagatgacaaatattaaaaagatttggttg-cagaatactt 11327  T
Q  300 ccataagagaattgtcattttcatttcaaaatctcagtgaacttc 344  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||    
T  11326 ccataagagaattgccatcttcatttcaaaatctcagtgaacttc 11282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0277; HSP #2
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 17 - 343
Target Start/End: Complemental strand, 2646 - 2320
Alignment:
Q  17 tgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcga 116  Q
    |||||||||||||||  ||||||  ||||||| ||||||| ||||||||||||||| |  |||  | ||||| | |||||||||||||||||||| || |    
T  2646 tgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttagaaaagttctcctttgaatattgtgagaatttaattacaattcacaattcaa 2547  T
Q  117 ttgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaact 216  Q
    ||||  |||| |||||||||||||   ||| ||||||   ||||||||| |||||  |||||||||| |||    |  |||| |||||   |||| |  |    
T  2546 ttggacacctcaataaacttgaaaggttaagtgcaaatggttgcagcaaactcgaacgttttccacctttagggcttgcatcccttaatgaattgaatat 2447  T
Q  217 ctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtca 316  Q
    || | | |||   || ||||||||||||||| |||||||||||||||||| |||||| |||  |||  |||||    |||||||||||||||||||| ||    
T  2446 ctcttattgtgagagtctcaagagttttccaaaattattatgcaagatgacaaatatgaaaatgatttggttgcagaaaacttccataagagaattgcca 2347  T
Q  317 ttttcatttcaaaatctcagtgaactt 343  Q
    | ||||||||||||||||| |||||||    
T  2346 tcttcatttcaaaatctcaatgaactt 2320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 90; Significance: 3e-43; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 2 - 359
Target Start/End: Original strand, 61797 - 62154
Alignment:
Q  2 ttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatta 101  Q
    |||||||| ||| ||||| || |||||| || || |||| |||||||  | |||||||||||||||||||| | ||||  ||  |||||||||||| |||    
T  61797 ttgatattcgacaattgtcaagatttaatctatacacccgatgtctcatggcttccaaatttagaaaagttctcgtttgcaagatgtcataatttagtta 61896  T
Q  102 caattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctct 201  Q
    |||||||||| ||  || | |||||||||| | | |||| | ||| |||| ||  ||||   |||||||||||||||||||||||||| |   | |||||    
T  61897 caattcacaattcacttagatacctaaatagattagaaatcttaaatgcagagggttgcgagaagctcgagagttttccacccttacagtctccctctct 61996  T
Q  202 taagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttcc 301  Q
    | |||  |||||||||| | | |||   || |||||||||||||||||||||||||||||||||| ||||||||||   |||  ||||   |||||||||    
T  61997 tcagaatttggaactctctaattgtaagagtctcaagagttttccagaattattatgcaagatgacaaatataaaatctatcttgttgaaggaaacttcc 62096  T
Q  302 ataagagaattgtcattttcatttcaaaatctcagtgaacttcgtgacctaataatat 359  Q
    ||| |||||||  ||||||| ||||||||||| |||||||||||| || ||| |||||    
T  62097 ataggagaatttccattttcctttcaaaatcttagtgaacttcgtcacttaacaatat 62154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 75; Significance: 3e-34; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 15 - 343
Target Start/End: Original strand, 22023479 - 22023808
Alignment:
Q  15 attgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaact- 113  Q
    ||||||||||||| |||| |||||  |||||||| ||||||||||||||||||||||| | ||||  ||||||| | ||||||||||||||| |||| |     
T  22023479 attgtgaatattttacctatatacgtaatgtctcaggtcttccaaatttagaaaagttatcgtttgaaaattgtaagaatttaattacaattgacaattc 22023578  T
Q  114 --cgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattg 211  Q
      ||||  |  ||| || ||||||||||| | | | |||| |   ||||||||| |||||| |||||||||| |||   ||| |||| ||||||| ||||    
T  22023579 gacgatcagacaccaaagtaaacttgaaatcttgaatgcagatggttgcagcaatctcgagcgttttccaccattaggtttggcatcacttaagaaattg 22023678  T
Q  212 gaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaat 311  Q
    |||||||   |||||   || |||  |||||||||| |||||||||||||||||| ||||||| || | ||   ||||| | | ||||||||||||||||    
T  22023679 gaactctccaagtgtaggagtctc--gagttttccaaaattattatgcaagatgaaaaatatagaatatatttcgttgtataatacttccataagagaat 22023776  T
Q  312 tgtcattttcatttcaaaatctcagtgaactt 343  Q
    || ||| ||| ||||||||||||||| |||||    
T  22023777 tgccatcttcttttcaaaatctcagtaaactt 22023808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 274
Target Start/End: Complemental strand, 29271810 - 29271537
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    |||||||||||||   |||||||| |||||   ||| ||| ||||||| || ||| |||||||||||||||| | ||||  ||||||| ||||||||| |    
T  29271810 cttgatattggaccgatgtgaatacttaacacatatccccgatgtctcaggcctttcaaatttagaaaagttatcgtttgaaaattgtgataatttaact 29271711  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||| ||||||||  ||||||||||||||||||   ||| |||| |   |||||  |||||| |   ||||||||| |||   ||| ||||||    
T  29271710 acaattcacaattcgattggacacctaaataaacttgaaaggttaagtgcatatgcttgcaaaaagctcaaacattttccacctttaggtttggcatctc 29271611  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatata 274  Q
    |||||  |||| | |||  ||  ||| | || ||| | |||||||||||||||||||||||||||| |||||||    
T  29271610 ttaaggaattgaatctcagtggttgtgtgagtctcgatagttttccagaattattatgcaagatgaaaaatata 29271537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 85 - 136
Target Start/End: Original strand, 15038975 - 15039026
Alignment:
Q  85 ttgtcataatttaattacaattcacaactcgattgggtacctaaataaactt 136  Q
    |||| |||||||||||||||||||||| |||| ||| |||||||||||||||    
T  15038975 ttgtgataatttaattacaattcacaattcgactggatacctaaataaactt 15039026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 315 - 344
Target Start/End: Complemental strand, 29271496 - 29271467
Alignment:
Q  315 cattttcatttcaaaatctcagtgaacttc 344  Q
    ||||||||||||||||||||||||||||||    
T  29271496 cattttcatttcaaaatctcagtgaacttc 29271467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 71; Significance: 6e-32; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 17 - 343
Target Start/End: Original strand, 9740 - 10066
Alignment:
Q  17 tgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcga 116  Q
    |||||||||||||||  ||||||  ||||||| ||||||| ||||||||||||||| |  |||  | ||||| | |||||||||||||||||||| || |    
T  9740 tgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttagaaaagttctcctttgaatattgtgagaatttaattacaattcacaattcaa 9839  T
Q  117 ttgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctcttaagatattggaact 216  Q
    ||||  |||| |||||||||||||   ||| ||||||   ||||||||| |||||  |||||||||| |||    |  |||| |||||   |||| |  |    
T  9840 ttggacacctcaataaacttgaaaggttaagtgcaaatggttgcagcaaactcgaacgttttccacctttagggcttgcatcccttaatgaattgaatat 9939  T
Q  217 ctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttccataagagaattgtca 316  Q
    || | | |||   || ||||||||||||||| |||||||||||||||||| |||||| |||  |||  |||||    |||||||||||||||||||| ||    
T  9940 ctcttattgtgagagtctcaagagttttccaaaattattatgcaagatgacaaatatgaaaacgatttggttgcagaaaacttccataagagaattgcca 10039  T
Q  317 ttttcatttcaaaatctcagtgaactt 343  Q
    | ||||||||||||||||| |||||||    
T  10040 tcttcatttcaaaatctcaatgaactt 10066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0349 (Bit Score: 68; Significance: 4e-30; HSPs: 1)
Name: scaffold0349
Description:

Target: scaffold0349; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 344
Target Start/End: Original strand, 15474 - 15817
Alignment:
Q  1 cttgatattggactattgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaatt 100  Q
    |||||||||||||   ||| ||||||||||   ||||||| ||||||| || ||| |||||||||||||||| | ||||  ||  ||| |||||||||||    
T  15474 cttgatattggaccgatgtaaatatttaacacatatacccgatgtctcaggcctttcaaatttagaaaagttatcgtttgaaagatgttataatttaatt 15573  T
Q  101 acaattcacaactcgattgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacccttacaattgacatctc 200  Q
    ||||||||||| ||||||||  |||| |||||||||||||   ||| |||| |   |||||  ||| ||||   ||||||||| |||   ||| ||||||    
T  15574 acaattcacaattcgattggacaccttaataaacttgaaaggttaagtgcatatggttgcaataaggtcgaacattttccacctttaggtttggcatctc 15673  T
Q  201 ttaagatattggaactctatgagtgtttcagactcaagagttttccagaattattatgcaagatgataaatataaaagagatccggttgtctgaaacttc 300  Q
    |||||  |||| | |||  |   ||    || |||||||||||||||||||||||||||||||||| ||||||| |  | ||  |||||| | | |||||    
T  15674 ttaaggaattgaatctcagttcttgcaggagtctcaagagttttccagaattattatgcaagatgacaaatatagacaatatttggttgtgtaatacttc 15773  T
Q  301 cataagagaattgtcattttcatttcaaaatctcagtgaacttc 344  Q
    |||| ||||| || ||||||||||||||||||| ||||||||||    
T  15774 cataggagaactgccattttcatttcaaaatcttagtgaacttc 15817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870 (Bit Score: 51; Significance: 5e-20; HSPs: 2)
Name: scaffold1870
Description:

Target: scaffold1870; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 183
Target Start/End: Original strand, 1021 - 1187
Alignment:
Q  17 tgtgaatatttaacctgtatacccaatgtctccggtcttccaaatttagaaaagttgttgtttataaattgtcataatttaattacaattcacaactcga 116  Q
    |||||||||||||||  ||||||  ||||||| ||||||| ||||||||||||||| |  |||  | ||||| | |||||||||||||||||||| || |    
T  1021 tgtgaatatttaacccatatacctgatgtctcaggtcttcaaaatttagaaaagttctcctttgaatattgtgagaatttaattacaattcacaattcaa 1120  T
Q  117 ttgggtacctaaataaacttgaaaccctaattgcaaagtattgcagcaagctcgagagttttccacc 183  Q
    ||||  |||| |||||||||||||   ||| ||||||   ||||||||| |||||  ||||||||||    
T  1121 ttggacacctcaataaacttgaaaggttaagtgcaaatggttgcagcaaactcgaacgttttccacc 1187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1870; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 233 - 273
Target Start/End: Original strand, 1237 - 1277
Alignment:
Q  233 ctcaagagttttccagaattattatgcaagatgataaatat 273  Q
    ||||||||||||||| |||||||||||||||||| ||||||    
T  1237 ctcaagagttttccaaaattattatgcaagatgacaaatat 1277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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