View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8008_low_32 (Length: 320)
Name: NF8008_low_32
Description: NF8008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8008_low_32 |
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Alignment Details
Target: chr7 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 28 - 308
Target Start/End: Complemental strand, 44703058 - 44702778
Alignment:
| Q |
28 |
ctcttatgatccttacttacccccaataggttaatagataaaaaattatcttcctttcctttcttgcaagtgattcgatgccnnnnnnnccttggcaaga |
127 |
Q |
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| T |
44703058 |
ctcttatgatccttacttacccccaataggttaatagatcaaaaattatcttcctttccttgcttgcaagtgattcgatgcctttttttccttggcaaga |
44702959 |
T |
|
| Q |
128 |
ataaggaacccttttccttaacnnnnnnngatatgacatcccttttccttgaagagcgccactttatttttccaccttactccatgattatgttggcata |
227 |
Q |
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| T |
44702958 |
ataagcaacccttttccttaacaaaaaaagatatgacatcccttttccttgaagagcgccactttatttttccaccttactccatgattatgttggcata |
44702859 |
T |
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| Q |
228 |
tttttcaccctccatacctacatagacacttagaatatatagagaatatatgagggtaaagaaagtgaaaaatggaatatt |
308 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44702858 |
tttttcaccctccatacctacatagacacttagaatatatagagaatatatgagggtaaagaaagtgaaaaatggaatatt |
44702778 |
T |
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