View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8008_low_36 (Length: 285)

Name: NF8008_low_36
Description: NF8008
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8008_low_36
NF8008_low_36
[»] scaffold0035 (3 HSPs)
scaffold0035 (14-184)||(80085-80259)
scaffold0035 (14-82)||(84136-84204)
scaffold0035 (195-239)||(84079-84123)
[»] chr5 (17 HSPs)
chr5 (14-184)||(31173923-31174097)
chr5 (14-184)||(27261427-27261601)
chr5 (14-184)||(28396313-28396487)
chr5 (13-184)||(41882131-41882306)
chr5 (14-184)||(31170155-31170329)
chr5 (14-184)||(28392339-28392513)
chr5 (14-184)||(41873327-41873502)
chr5 (15-160)||(27265537-27265685)
chr5 (13-126)||(24089396-24089513)
chr5 (88-165)||(20892996-20893073)
chr5 (88-165)||(20914470-20914547)
chr5 (188-239)||(27265446-27265497)
chr5 (117-171)||(24090378-24090432)
chr5 (203-239)||(31170356-31170392)
chr5 (203-239)||(41873537-41873573)
chr5 (88-139)||(20922135-20922187)
chr5 (203-239)||(27261640-27261676)
[»] chr8 (28 HSPs)
chr8 (16-184)||(6334111-6334283)
chr8 (13-184)||(36797721-36797896)
chr8 (14-184)||(1656170-1656344)
chr8 (14-184)||(14033420-14033594)
chr8 (14-184)||(24516865-24517039)
chr8 (14-184)||(36803901-36804075)
chr8 (14-184)||(417450-417625)
chr8 (14-184)||(6337891-6338065)
chr8 (14-184)||(23712605-23712778)
chr8 (15-184)||(14029629-14029801)
chr8 (18-184)||(12876976-12877146)
chr8 (14-179)||(1659902-1660070)
chr8 (15-179)||(413432-413597)
chr8 (14-168)||(12880581-12880739)
chr8 (14-149)||(37404553-37404692)
chr8 (13-84)||(24512834-24512905)
chr8 (92-184)||(27276718-27276812)
chr8 (139-184)||(24512923-24512968)
chr8 (13-68)||(27276805-27276860)
chr8 (89-163)||(27243341-27243419)
chr8 (89-163)||(27254916-27254994)
chr8 (203-239)||(417391-417427)
chr8 (203-239)||(6337831-6337867)
chr8 (203-239)||(12877172-12877208)
chr8 (203-239)||(14029831-14029867)
chr8 (203-239)||(24516807-24516843)
chr8 (203-239)||(36803839-36803875)
chr8 (197-239)||(37404509-37404551)
[»] chr2 (11 HSPs)
chr2 (16-184)||(40322002-40322174)
chr2 (17-184)||(40325711-40325883)
chr2 (14-184)||(36216133-36216307)
chr2 (13-184)||(2387169-2387342)
chr2 (48-184)||(2381717-2381857)
chr2 (51-184)||(8264581-8264718)
chr2 (184-239)||(36216026-36216081)
chr2 (184-239)||(8264774-8264829)
chr2 (203-239)||(2387105-2387141)
chr2 (203-239)||(40322196-40322232)
chr2 (91-151)||(1577225-1577284)
[»] chr7 (10 HSPs)
chr7 (13-184)||(31297886-31298061)
chr7 (13-184)||(31297632-31297808)
chr7 (15-184)||(24050566-24050739)
chr7 (14-184)||(39751447-39751621)
chr7 (14-184)||(5098234-5098407)
chr7 (15-184)||(39755226-39755381)
chr7 (14-136)||(5094165-5094291)
chr7 (40-184)||(24059116-24059262)
chr7 (188-239)||(5098135-5098186)
chr7 (203-239)||(39751656-39751692)
[»] chr3 (11 HSPs)
chr3 (15-184)||(44185276-44185449)
chr3 (14-184)||(37982171-37982344)
chr3 (15-180)||(3808809-3808978)
chr3 (14-170)||(3805237-3805397)
chr3 (14-167)||(37974856-37975014)
chr3 (14-152)||(44174729-44174870)
chr3 (14-152)||(44181429-44181570)
chr3 (14-132)||(44174590-44174711)
chr3 (14-132)||(44181290-44181411)
chr3 (184-239)||(37975045-37975100)
chr3 (188-239)||(7166221-7166273)
[»] chr4 (15 HSPs)
chr4 (13-184)||(50998031-50998206)
chr4 (14-184)||(45698270-45698444)
chr4 (16-184)||(22158611-22158783)
chr4 (14-176)||(25920225-25920391)
chr4 (15-184)||(23314163-23314337)
chr4 (16-184)||(25923056-25923227)
chr4 (14-184)||(23317926-23318095)
chr4 (15-165)||(54397547-54397701)
chr4 (13-115)||(51754664-51754770)
chr4 (14-84)||(51754468-51754538)
chr4 (184-239)||(25922952-25923007)
chr4 (189-239)||(25920473-25920523)
chr4 (97-169)||(43433575-43433647)
chr4 (204-239)||(50997971-50998006)
chr4 (203-239)||(45698469-45698505)
[»] chr6 (4 HSPs)
chr6 (14-184)||(13845036-13845209)
chr6 (14-84)||(13848902-13848972)
chr6 (188-239)||(13845262-13845313)
chr6 (184-239)||(13848775-13848829)
[»] chr1 (6 HSPs)
chr1 (13-184)||(8026541-8026708)
chr1 (13-180)||(8272153-8272331)
chr1 (14-127)||(25644564-25644681)
chr1 (184-239)||(25650886-25650941)
chr1 (54-160)||(21826237-21826345)
chr1 (203-239)||(8026734-8026770)
[»] scaffold0265 (1 HSPs)
scaffold0265 (54-160)||(6439-6547)


Alignment Details
Target: scaffold0035 (Bit Score: 142; Significance: 1e-74; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 80085 - 80259
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  80085 ccaaaccaatcaaaagttttcatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattc 80184  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  80185 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 80259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 14 - 82
Target Start/End: Complemental strand, 84204 - 84136
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaa 82  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  84204 ccaaaccaatcaaaattttccatgtgtactccattagaataataacatttattattttattttgcaaaa 84136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 195 - 239
Target Start/End: Complemental strand, 84123 - 84079
Alignment:
Q  195 aatccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||| ||||||||||||||||||||||||||||||| |||||    
T  84123 aatccagggaatttaatgccaaagatcatgcattcattcaaattt 84079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 31174097 - 31173923
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  31174097 ccaaaccaatcaaaagtttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattc 31173998  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31173997 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 31173923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 27261427 - 27261601
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  27261427 ccaaatcaatcaaaatttttcatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 27261526  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  27261527 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 27261601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 28396487 - 28396313
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  28396487 ccaaaccaatcaaaagtttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattc 28396388  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28396387 accccatcttaaattaataattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 28396313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 41882306 - 41882131
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatatt 108  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||    || |||||||||||||||||||||    
T  41882306 tccaaaccaatcaaaagttttcatgtatactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatatt 41882207  T
Q  109 caccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||  |||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  41882206 cacttcatcttaaattaatgattttttacgatttaaaccatcacaataattaaatttcacttctaatccaatcact 41882131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 31170155 - 31170329
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  31170155 ccaaaccaatcaaaattttccatgtgtactccattagaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 31170254  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31170255 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 31170329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 28392339 - 28392513
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| | ||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  28392339 ccaaaccaatcaaaattttccatgtgtgctccattagaataataacatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 28392438  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  28392439 atcccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 28392513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 41873327 - 41873502
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||| ||||||||| ||||||| |||||||    || ||||||||||||||||||||||    
T  41873327 ccaaaccaatcaaaattttccatgtgtactccattagaataataatatttattattttattttacaaaaatttagcatgtattttattatttgcatattc 41873426  T
Q  110 acccc-atcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  41873427 acccccatcttaaattaatgatattttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 41873502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 27265685 - 27265537
Alignment:
Q  15 caaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattca 110  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    || |||||||||||||||||||||||    
T  27265685 caaaccaatcaaaagtttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattca 27265586  T
Q  111 ccccatcttaaattaatgattttttacaatttaaaccatcacaataatta 160  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||    
T  27265585 -cccatcttaaattaatgattttttacaatttaaaccatcacaataatta 27265537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 126
Target Start/End: Original strand, 24089396 - 24089513
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatatt 108  Q
    ||||||||||| |||  ||| ||||| ||||||||||||||||| ||||||||||| |||||||||||||||    || |||||||||||||||||||||    
T  24089396 tccaaaccaattaaatttttccatgtgtactccattagaataatcacatttattattttattttgcaaaaatttagcatgtattttattatttgcatatt 24089495  T
Q  109 caccccatcttaaattaa 126  Q
    |||||||| |||||||||    
T  24089496 caccccattttaaattaa 24089513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 165
Target Start/End: Original strand, 20892996 - 20893073
Alignment:
Q  88 gtattttattatttgcatattcaccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaattt 165  Q
    ||||||||||||||||||||||||||||| ||||||||||||   ||||||||||||||||||| | |||||| ||||    
T  20892996 gtattttattatttgcatattcaccccattttaaattaatgacactttacaatttaaaccatcaaattaattagattt 20893073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 88 - 165
Target Start/End: Complemental strand, 20914547 - 20914470
Alignment:
Q  88 gtattttattatttgcatattcaccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaattt 165  Q
    ||||||||||||||||||||||||||||| ||||||||||||  |||||||||| ||||||||| | |||||| ||||    
T  20914547 gtattttattatttgcatattcaccccattttaaattaatgaccttttacaattcaaaccatcaaattaattagattt 20914470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 27265497 - 27265446
Alignment:
Q  188 aaaccgcaatccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||||    
T  27265497 aaactgcaatccagagaatttaatgccaaagatcatgcattcgttccaattt 27265446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 171
Target Start/End: Original strand, 24090378 - 24090432
Alignment:
Q  117 cttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctc 171  Q
    |||||||||||||| ||||||||||||| |||||||| |||||||||||| ||||    
T  24090378 cttaaattaatgatgttttacaatttaacccatcacattaattaaatttcccctc 24090432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 31170356 - 31170392
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  31170356 gaatttaatgccaaagatcatgcattcattcaaattt 31170392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 41873537 - 41873573
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  41873537 gaatttaatgccaaagatcatgcattcattcaaattt 41873573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 88 - 139
Target Start/End: Complemental strand, 20922187 - 20922135
Alignment:
Q  88 gtattttattatttgcatattcacccc-atcttaaattaatgattttttacaa 139  Q
    |||||||||||||| |||||||||||| || ||||||||||||  ||||||||    
T  20922187 gtattttattattttcatattcaccccaattttaaattaatgacattttacaa 20922135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 27261640 - 27261676
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||| ||||||||||||||||||||| |||||    
T  27261640 gaatttaataccaaagatcatgcattcattcaaattt 27261676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 136; Significance: 5e-71; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 6334111 - 6334283
Alignment:
Q  16 aaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattcac 111  Q
    ||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||||    
T  6334111 aaaccaatcaaaagttttcatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattcac 6334210  T
Q  112 cccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  6334211 cccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaattcaatcact 6334283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 36797721 - 36797896
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatatt 108  Q
    |||||||||||||||| ||| ||||| ||| ||||||||||||||||||||||||| |||||||||||||||    || |||||||||||||||||||||    
T  36797721 tccaaaccaatcaaaagtttccatgtgtaccccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatatt 36797820  T
Q  109 caccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  36797821 caccccatcttaaattaatgattttttacaatttaaaccattacaataattaaatttcacctctaatccaatcact 36797896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 1656170 - 1656344
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||| | |||||||||| |||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  1656170 ccaaaccaatcaaaagtttccatatgtactccattaaaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattc 1656269  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1656270 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 1656344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 14033594 - 14033420
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| |||| |||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  14033594 ccaaaccaatcaaaagtttttatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattc 14033495  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  14033494 accccatcttaaattgatgattttttacaatttaaaccatcacaataattaaatttcatctctaatccaatcact 14033420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 24517039 - 24516865
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  24517039 ccaaaccaatcaaaattttccatgtgtactccattagaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 24516940  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||    
T  24516939 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttatcctctaatccaatcact 24516865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 36804075 - 36803901
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||||  ||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  36804075 ccaaaccaatcaaaaaaattcatgtgtactccattagaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 36803976  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  36803975 accccatcttaaattaatgattttttacaatttaaaccatcacaataactaaatttctcctctaatccaatcact 36803901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 417625 - 417450
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatatt- 108  Q
    |||||| |||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    || |||||||||||||||||||||     
T  417625 ccaaactaatcaaaattttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcatgtattttattatttgcatattt 417526  T
Q  109 caccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  417525 caccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 417450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 6338065 - 6337891
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||| | ||||||||||||||||||| ||||||||| |||||||||| ||||    || ||||||||||||||||||||||    
T  6338065 ccaaaccaatcaaaattttccatttgtactccattagaataataatatttattattttattttgcacaaatttagcatgtattttattatttgcatattc 6337966  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6337965 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 6337891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 23712605 - 23712778
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  23712605 ccaaaccaatcaaaattttccatgtgtactccattagaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 23712704  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23712705 accccatcttaaattaatga-tttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 23712778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 14029629 - 14029801
Alignment:
Q  15 caaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattca 110  Q
    |||||||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||    || |||||||||||||||||||||||    
T  14029629 caaaccaatcaaaattttccatgtgtactccattagaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatattca 14029728  T
Q  111 ccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14029729 ccccatcttaaattaatga-tttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 14029801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 18 - 184
Target Start/End: Original strand, 12876976 - 12877146
Alignment:
Q  18 accaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattcaccc 113  Q
    ||||||||||| ||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||||    || ||||||||||||||||||||||||||    
T  12876976 accaatcaaaattttccatgtatactccattagaataataatatttattattttattttgtaaaaatttagcatgtattttattatttgcatattcaccc 12877075  T
Q  114 catcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||||||||||    
T  12877076 catcttaaattaatgattatttacaatttaaaccatcataataattaaatttctcctctaatccaatcact 12877146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 14 - 179
Target Start/End: Complemental strand, 1660070 - 1659902
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  1660070 ccaaaccaatcaaaattttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 1659971  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaa 179  Q
    |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1659970 accc-atcttaaactaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaa 1659902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 179
Target Start/End: Original strand, 413432 - 413597
Alignment:
Q  15 caaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattca 110  Q
    |||| ||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||    || |||||||||||||||||||||||    
T  413432 caaatcaatcaaaagttttcatgtgtacttcattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattca 413531  T
Q  111 ccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaa 179  Q
    ||||||||||||||||||||||||||||||||||   |||||||||||||||||| |||||||||||||    
T  413532 ccccatcttaaattaatgattttttacaatttaa---atcacaataattaaattttacctctaatccaa 413597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 14 - 168
Target Start/End: Complemental strand, 12880739 - 12880581
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  12880739 ccaaaccaatcaaaagtttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattc 12880640  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcac 168  Q
    ||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||||||    
T  12880639 acctcatcttaaattaataattttttacaatttaaaccatcataataattaaatttcac 12880581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 14 - 149
Target Start/End: Complemental strand, 37404692 - 37404553
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| | ||||||||||||     || ||||||||||||||||||||||    
T  37404692 ccaaaccaatcaaaagtttccatgtgtactccattagaataataacatttattatttaattttgcaaaaaattaacaagtattttattatttgcatattc 37404593  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccat 149  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  37404592 accccgtcttaaattaatgattttttacaatttaaaccat 37404553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 13 - 84
Target Start/End: Original strand, 24512834 - 24512905
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat 84  Q
    |||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  24512834 tccaaaccaatcaaaagttttcatgtgtactccattagaataataacatttattattttattttgcaaaaat 24512905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 92 - 184
Target Start/End: Complemental strand, 27276812 - 27276718
Alignment:
Q  92 tttattatttgcatattcaccccatc----ttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||    ||||||||||||| |||||||||||||||||||||| ||||| |||||| |||| ||||||||||||    
T  27276812 tttattatttgcatattcaccccatccatcttaaattaatgatgttttacaatttaaaccatcacattaatt-aatttc-cctccaatccaatcact 27276718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 184
Target Start/End: Original strand, 24512923 - 24512968
Alignment:
Q  139 atttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  24512923 atttaaaccatcacaataattaaatttcacctctaatccaatcact 24512968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Complemental strand, 27276860 - 27276805
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattat 68  Q
    |||||| |||||||||| |||||||| |||||||||||||||||||||||||||||    
T  27276860 tccaaatcaatcaaaaaatttcatgtgtactccattagaataataacatttattat 27276805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 27243341 - 27243419
Alignment:
Q  89 tattttattatttgcatattcaccccat----cttaaattaatgattttttacaatttaaaccatcacaataattaaat 163  Q
    ||||||| |||||||||||||| |||||    ||||||||||| || |||||||||||||||||||||| |||||||||    
T  27243341 tattttactatttgcatattcaacccatacatcttaaattaataatattttacaatttaaaccatcacattaattaaat 27243419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 89 - 163
Target Start/End: Original strand, 27254916 - 27254994
Alignment:
Q  89 tattttattatttgcatattcaccccat----cttaaattaatgattttttacaatttaaaccatcacaataattaaat 163  Q
    ||||||| |||||||||||||| |||||    ||||||||||| || |||||||||||||||||||||| |||||||||    
T  27254916 tattttactatttgcatattcaacccatacatcttaaattaataatattttacaatttaaaccatcacattaattaaat 27254994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 417427 - 417391
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  417427 gaatttaatgccaaagatcatgcattcattcaaattt 417391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 6337867 - 6337831
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  6337867 gaatttaatgccaaagatcatgcattcattcaaattt 6337831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 12877172 - 12877208
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  12877172 gaatttaatgccaaagatcatgcattcattcaaattt 12877208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 14029831 - 14029867
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  14029831 gaatttaatgccaaagatcatgcattcattcaaattt 14029867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 24516843 - 24516807
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  24516843 gaatttaatgccaaagatcatgcattcattcaaattt 24516807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 36803875 - 36803839
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  36803875 gaatttaatgccaaagatcatgcattcattcaaattt 36803839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 239
Target Start/End: Complemental strand, 37404551 - 37404509
Alignment:
Q  197 tccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||| ||||||||||| ||||||||||||||| |||||||||    
T  37404551 tccagggaatttaatgctaaagatcatgcattcgttccaattt 37404509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 136; Significance: 5e-71; HSPs: 11)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 40322002 - 40322174
Alignment:
Q  16 aaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattcac 111  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    || ||||||||||||||||||||||||    
T  40322002 aaaccaatcaaaaattttcatgtgtactccattagaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatattcac 40322101  T
Q  112 cccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40322102 cccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 40322174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 17 - 184
Target Start/End: Complemental strand, 40325883 - 40325711
Alignment:
Q  17 aaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattcacc 112  Q
    |||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    || |||||||||||||||||||||||||    
T  40325883 aaccaatcaaaagttttcatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattcacc 40325784  T
Q  113 ccatcttaaattaatga-ttttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40325783 ccatcttaaattaatgatttttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 40325711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 36216307 - 36216133
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||| ||||||||| ||||||||| ||||| ||||||||||||| ||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  36216307 ccaaatcaatcaaaatttttcatgtgtactctattagaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 36216208  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36216207 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 36216133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 2387342 - 2387169
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatatt 108  Q
    |||||||||||||||| ||| ||||| ||||||||  ||||||||| ||||||||| |||||||||||||||    || |||||||||||||||||||||    
T  2387342 tccaaaccaatcaaaattttccatgtgtactccat--gaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatatt 2387245  T
Q  109 caccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2387244 caccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 2387169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 48 - 184
Target Start/End: Original strand, 2381717 - 2381857
Alignment:
Q  48 tagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattcaccccatcttaaattaatgattttttacaattta 143  Q
    ||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2381717 tagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattcaccccatcttaaattaatgattttttacaattta 2381816  T
Q  144 aaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  2381817 aaccatcacaataattaaatttcacctctaatccaatcact 2381857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 51 - 184
Target Start/End: Original strand, 8264581 - 8264718
Alignment:
Q  51 aataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattcaccccatcttaaattaatgattttttacaatttaaac 146  Q
    |||||||||||||||||| |||||||||||||||    || |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  8264581 aataataacatttattattttattttgcaaaaatttagcatgtattttattatttacatattcaccccatcttaaattaatgattttttacaatttaaac 8264680  T
Q  147 catcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||| |||||||||||||||||    
T  8264681 catcacaataattaaatttcccctctaatccaatcact 8264718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 36216081 - 36216026
Alignment:
Q  184 tatcaaaccgcaatccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36216081 tatcaaaccgcaatccagggaatttaatgccaaagatcatgcattcattccaattt 36216026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 8264774 - 8264829
Alignment:
Q  184 tatcaaaccgcaatccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    |||||||||||||||||| |||||||||| | ||||||||||||||||||||||||    
T  8264774 tatcaaaccgcaatccagggaatttaatgtcgaagatcatgcattcattccaattt 8264829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Complemental strand, 2387141 - 2387105
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  2387141 gaatttaatgccaaagatcatgcattcattcaaattt 2387105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 40322196 - 40322232
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  40322196 gaatttaatgccaaagatcatgcattcattcaaattt 40322232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 1577284 - 1577225
Alignment:
Q  91 ttttattatttgcatattcaccccatcttaaattaatgattttttacaatttaaaccatca 151  Q
    |||||||||||| ||||||| |||| |||||||||||||  ||||||| |||||| |||||    
T  1577284 ttttattatttgtatattcatccca-cttaaattaatgacattttacattttaaatcatca 1577225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 135; Significance: 2e-70; HSPs: 10)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 31298061 - 31297886
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatatt 108  Q
    |||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    || |||||||||||||||||||||    
T  31298061 tccaaaccaatcaaaagtttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatatt 31297962  T
Q  109 caccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  31297961 caccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaaacact 31297886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 31297632 - 31297808
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatatt 108  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    || |||||||||||||||||||||    
T  31297632 tccaaaccaatcaaaaaatttcatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcatgtattttattatttgcatatt 31297731  T
Q  109 caccccatcttaaattaatga-ttttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  31297732 caccccatcttaaattaatgatttttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 31297808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 24050566 - 24050739
Alignment:
Q  15 caaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattca 110  Q
    |||| |||||||||| |||||||| ||||||||||||||||||||| ||||||| |||||||||||||||    || |||||||||||||||||||||||    
T  24050566 caaatcaatcaaaaaatttcatgtgtactccattagaataataacaattattattttattttgcaaaaatttagcatgtattttattatttgcatattca 24050665  T
Q  111 ccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24050666 ccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 24050739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 39751447 - 39751621
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| |||||||||| |||||||| ||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  39751447 ccaaaccaatcaaaattttccatgtgtactccattaaaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 39751546  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  39751547 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 39751621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 5098407 - 5098234
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| |||  |||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  5098407 ccaaaccaatcaaaagtttctatgtgtactccattagaataataacatttattattttattttgcaaaaatttaacaagtattttattatttgcatattc 5098308  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  5098307 accc-atcttaaattaatgattttttacattttaaaccatcacaataattaaatttcacctctaatccaatcact 5098234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 39755381 - 39755226
Alignment:
Q  15 caaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaatcacgtattttattatttgcatattcacccc 114  Q
    ||||||||| |||| ||||||||| ||||||||||||||||||||||||||||| ||||||              ||||||||||||||||||||||| |    
T  39755381 caaaccaattaaaagttttcatgtgtactccattagaataataacatttattattttattt--------------attttattatttgcatattcacctc 39755296  T
Q  115 atcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39755295 attttaaatgaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 39755226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 14 - 136
Target Start/End: Original strand, 5094165 - 5094291
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||| ||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  5094165 ccaaatcaatcaaaattttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 5094264  T
Q  110 accccatcttaaattaatgatttttta 136  Q
    |||||||||||||||||||||||||||    
T  5094265 accccatcttaaattaatgatttttta 5094291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 40 - 184
Target Start/End: Complemental strand, 24059262 - 24059116
Alignment:
Q  40 tactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattcaccccatcttaaattaatgatt--tt 133  Q
    |||||||||||||||||||||||    || |||||||||| ||||    || ||||||||||||||||||||||||||||||||||||||||||||  ||    
T  24059262 tactccattagaataataacatt----attttattttgcagaaatttagcaagtattttattatttgcatattcaccccatcttaaattaatgatttttt 24059167  T
Q  134 ttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||    
T  24059166 ttacaatttaagccatcacaataattaaatttcacctctaatcaaatcact 24059116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 5098186 - 5098135
Alignment:
Q  188 aaaccgcaatccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    |||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  5098186 aaaccgcaatccagggaatttaatgccaaagatcatgcattcgttccaattt 5098135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 39751656 - 39751692
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  39751656 gaatttaatgccaaagatcatgcattcattcaaattt 39751692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 11)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 15 - 184
Target Start/End: Complemental strand, 44185449 - 44185276
Alignment:
Q  15 caaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattca 110  Q
    ||||| |||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||    ||  ||||||||||||||||||||||    
T  44185449 caaactaatcaaaagttttcatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaaatattttattatttgcatattca 44185350  T
Q  111 ccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44185349 ccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 44185276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 37982344 - 37982171
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  37982344 ccaaaccaatcaaaattttccatgtatactccattagaataataacatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 37982245  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  37982244 accc-atcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 37982171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 15 - 180
Target Start/End: Complemental strand, 3808978 - 3808809
Alignment:
Q  15 caaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattca 110  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||     
T  3808978 caaaccaatcaaaaaatttcatgtgtactccattagaataataacatttattattttattttgcaaaaatttaacatgtattttattatttgcatattcg 3808879  T
Q  111 ccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaat 180  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  3808878 ccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaat 3808809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 14 - 170
Target Start/End: Original strand, 3805237 - 3805397
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| | |||||||||||||    || ||||||||||||||||||||||    
T  3805237 ccaaaccaatcaaaagtttccatgtgtactccattagaataataacatttattatttaattttgcaaaaatttagcaagtattttattatttgcatattc 3805336  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacct 170  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3805337 accccgtcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacct 3805397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 114; E-Value: 7e-58
Query Start/End: Original strand, 14 - 167
Target Start/End: Original strand, 37974856 - 37975014
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  37974856 ccaaaccaatcaaaagtttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattc 37974955  T
Q  110 accccatcttaaattaatga-ttttttacaatttaaaccatcacaataattaaatttca 167  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  37974956 accccatcttaaattaatgatttttttacaatttaaaccatcacaataattaaatttca 37975014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 44174729 - 44174870
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    ||  |||||||||||||||||||||    
T  44174729 ccaaaccaatcaaaattttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaaatattttattatttgcatattc 44174828  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcac 152  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  44174829 accccatcttaaa-taatgattttttacaatttaaaccatcac 44174870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 14 - 152
Target Start/End: Original strand, 44181429 - 44181570
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    ||  |||||||||||||||||||||    
T  44181429 ccaaaccaatcaaaattttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaaatattttattatttgcatattc 44181528  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcac 152  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  44181529 accccatcttaaa-taatgattttttacaatttaaaccatcac 44181570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 44174590 - 44174711
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaa---atcacgtattttattatttgcatattca 110  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||   | || |||||||||||||||||||||||    
T  44174590 ccaaaccaatcaaaattttccatgtgtactccattagaataataatatttattattttattttgcaaaatttagcatgtattttattatttgcatattca 44174689  T
Q  111 ccccatcttaaattaatgattt 132  Q
    ||||||||||||||||||||||    
T  44174690 ccccatcttaaattaatgattt 44174711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 14 - 132
Target Start/End: Original strand, 44181290 - 44181411
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaa---atcacgtattttattatttgcatattca 110  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||   | || |||||||||||||||||||||||    
T  44181290 ccaaaccaatcaaaattttccatgtgtactccattagaataataatatttattattttattttgcaaaatttagcatgtattttattatttgcatattca 44181389  T
Q  111 ccccatcttaaattaatgattt 132  Q
    ||||||||||||||||||||||    
T  44181390 ccccatcttaaattaatgattt 44181411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 184 - 239
Target Start/End: Original strand, 37975045 - 37975100
Alignment:
Q  184 tatcaaaccgcaatccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||| |||||||||||||| |||||||||| |||||||||||||||| |||||||||    
T  37975045 tatgaaaccgcaatccagggaatttaatgtcaaagatcatgcattcgttccaattt 37975100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 188 - 239
Target Start/End: Complemental strand, 7166273 - 7166221
Alignment:
Q  188 aaaccgcaatcc-agagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    |||||||||||| | |||||||| |||||| ||||||||||||||||||||||    
T  7166273 aaaccgcaatcctaaagaatttattgccaatgatcatgcattcattccaattt 7166221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 13 - 184
Target Start/End: Complemental strand, 50998206 - 50998031
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatatt 108  Q
    ||||||||||| |||||||| ||||  ||||||||||||||||||||||||||||| |||||||||||||||    || |||||||||||||||||||||    
T  50998206 tccaaaccaataaaaaatttccatgcgtactccattagaataataacatttattattttattttgcaaaaatttagcatgtattttattatttgcatatt 50998107  T
Q  109 caccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  50998106 caccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 50998031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 45698270 - 45698444
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||| ||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  45698270 ccaaatcaatcaaaatttttcatgtgtactccattagaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 45698369  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45698370 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 45698444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 16 - 184
Target Start/End: Original strand, 22158611 - 22158783
Alignment:
Q  16 aaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattcac 111  Q
    ||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||||    
T  22158611 aaaccaatcaaaagtttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattcac 22158710  T
Q  112 cccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22158711 cctatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaattcaatcact 22158783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 14 - 176
Target Start/End: Original strand, 25920225 - 25920391
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  25920225 ccaaaccaatcaaaagtttccatgtgtactccattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattc 25920324  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatc 176  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25920325 accccatcttaaattaataattttttacaatttaaaccatcacaataattaaatttcacctctaatc 25920391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 15 - 184
Target Start/End: Original strand, 23314163 - 23314337
Alignment:
Q  15 caaaccaatcaaaaa-ttttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||  ||||||||| ||||| ||||||||||||| ||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  23314163 caaaccaatcaaaaggttttcatgtgtactctattagaataataatatttattattttattttgcaaaaatttagcaagtattttattatttgcatattc 23314262  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  23314263 accccatcttaaattaatgattttttacaatttaaaccatcacactaattaaatttcacctctaatccaatcact 23314337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 184
Target Start/End: Complemental strand, 25923227 - 25923056
Alignment:
Q  16 aaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattcac 111  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||||||||| |||||||||||||||    || ||||||||||||||||||||||||    
T  25923227 aaaccaatcaaaaaatttcatgtgtactccattagaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatattcac 25923128  T
Q  112 cccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    || |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  25923127 cc-atcttaaattaatgattttttataatttaaaccatcacaataattaaatttctcctctaatccaatcact 25923056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 14 - 184
Target Start/End: Complemental strand, 23318095 - 23317926
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||| ||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  23318095 ccaaatcaatcaaaattttccatgtgtactccattagaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatattc 23317996  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||     |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  23317995 accccatcttaa-----tgattttttacaatttaaaccatcacaataattaaatttctcctctaatccaatcact 23317926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 54397547 - 54397701
Alignment:
Q  15 caaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattca 110  Q
    ||||| |||||||| ||||||||  |||| |||||||||||||| ||||||||| |||||||||||||||    ||  || ||||||||||||||||| |    
T  54397547 caaactaatcaaaagttttcatgcctacttcattagaataataatatttattattttattttgcaaaaatttagcaaataatttattatttgcatattta 54397646  T
Q  111 ccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaattt 165  Q
    | |||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  54397647 ctccatcttaaattaatgattttttacaatttaaactatcacaataattaaattt 54397701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 13 - 115
Target Start/End: Complemental strand, 51754770 - 51754664
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatatt 108  Q
    |||||| ||||||||| ||| ||||| ||||||||||||||||||| ||||||||| |||||||||||||||    || |||||||||||||||||||||    
T  51754770 tccaaatcaatcaaaattttccatgtgtactccattagaataataatatttattattttattttgcaaaaatttagcatgtattttattatttgcatatt 51754671  T
Q  109 cacccca 115  Q
    |||||||    
T  51754670 cacccca 51754664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 84
Target Start/End: Original strand, 51754468 - 51754538
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat 84  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  51754468 ccaaaccaatcaaaagtttccatgtgtactccattagaataataacatttattattttattttgcaaaaat 51754538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 25923007 - 25922952
Alignment:
Q  184 tatcaaaccgcaatccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  25923007 tatcaaacagcaatccagagaatttaatgccaaagatcatgcattcattccaattt 25922952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 189 - 239
Target Start/End: Original strand, 25920473 - 25920523
Alignment:
Q  189 aaccgcaatccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||| ||||||||||||||||||||||||||| |||||||||    
T  25920473 aaccgcaatccagggaatttaatgccaaagatcatgcattcgttccaattt 25920523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 43433647 - 43433575
Alignment:
Q  97 tatttgcatattcaccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacc 169  Q
    |||||||||||||||||||| ||||||||||||  |||||||||||| ||||||| | |||||  ||||||||    
T  43433647 tatttgcatattcaccccattttaaattaatgacattttacaatttacaccatcaaattaatttgatttcacc 43433575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 239
Target Start/End: Complemental strand, 50998006 - 50997971
Alignment:
Q  204 aatttaatgccaaagatcatgcattcattccaattt 239  Q
    |||||||||||||||||||||||||||||| |||||    
T  50998006 aatttaatgccaaagatcatgcattcattcaaattt 50997971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 45698469 - 45698505
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||| ||||||||||||| |||||    
T  45698469 gaatttaatgccaaagaccatgcattcattcaaattt 45698505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 122; Significance: 1e-62; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 14 - 184
Target Start/End: Original strand, 13845036 - 13845209
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||| ||||| |||||||||| |||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  13845036 ccaaaccaatcaaaagtttccatgtgtactccattaaaataataacatttattattttattttgcaaaaatatagcaagtattttattatttgcatattc 13845135  T
Q  110 accccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
     ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  13845136 gccccatcttaaattaatgattttttacaatttaaacc-tcacaataattaaatttcacctctaatccaatcact 13845209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 14 - 84
Target Start/End: Complemental strand, 13848972 - 13848902
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat 84  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||    
T  13848972 ccaaaccaatcaaaattttccatgtgtactccattagaataataacatttattattttattttgcaaaaat 13848902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 239
Target Start/End: Original strand, 13845262 - 13845313
Alignment:
Q  188 aaaccgcaatccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    |||||||||| ||| |||||||||| |||||||||||||||| |||||||||    
T  13845262 aaaccgcaattcagggaatttaatgtcaaagatcatgcattcgttccaattt 13845313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 13848829 - 13848775
Alignment:
Q  184 tatcaaaccgcaatccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||| |||||||||||||||||||  ||| |||||||||||||| ||||||    
T  13848829 tatcaaaccacaatccagagaatttaatgtgaaa-atcatgcattcatttcaattt 13848775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 2e-46; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 13 - 184
Target Start/End: Original strand, 8026541 - 8026708
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaatcacgtattttattatttgcatattcacc 112  Q
    |||| ||||||||||| ||||||||| || |||||||||||||||| ||||||||| |||||||||||||||   | || |    |||||||||||||||    
T  8026541 tccacaccaatcaaaatttttcatgtgtattccattagaataataatatttattattttattttgcaaaaatttagcatgt----atttgcatattcacc 8026636  T
Q  113 ccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaatcact 184  Q
    ||||||||||||||||||| ||||||||||||||||||  |||||||||||||| |||||||||||||||||    
T  8026637 ccatcttaaattaatgattatttacaatttaaaccatcgtaataattaaatttctcctctaatccaatcact 8026708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 13 - 180
Target Start/End: Original strand, 8272153 - 8272331
Alignment:
Q  13 tccaaaccaatcaaaaattttcatgtatact---ccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattat----tt 101  Q
    |||||||||||||||| ||| ||||| ||||   ||||||||||||| | |||||||||||||||||||||||||    || |||||| |||||    ||    
T  8272153 tccaaaccaatcaaaattttccatgtgtactactccattagaataatcatatttattatcttattttgcaaaaatttaacatgtatttcattatatattt 8272252  T
Q  102 gcatattcaccccatcttaaattaatgattttttacaatttaaaccatcacaataattaaatttcacctctaatccaat 180  Q
    ||||||| ||||||| ||||||||||||| |||||||||||||||||||||| || ||||||||| |||||||||||||    
T  8272253 gcatatttaccccattttaaattaatgatgttttacaatttaaaccatcacattatttaaatttctcctctaatccaat 8272331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 14 - 127
Target Start/End: Original strand, 25644564 - 25644681
Alignment:
Q  14 ccaaaccaatcaaaaattttcatgtatactccattagaataataacatttattatcttattttgcaaaaat----cacgtattttattatttgcatattc 109  Q
    ||||||||||||||| ||||||||| |||| |||||||||||||||||||||||| |||||||||||||||    || ||||||||||||||||||||||    
T  25644564 ccaaaccaatcaaaagttttcatgtgtacttcattagaataataacatttattattttattttgcaaaaatttagcaagtattttattatttgcatattc 25644663  T
Q  110 accccatcttaaattaat 127  Q
     |||||||||||||||||    
T  25644664 cccccatcttaaattaat 25644681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 184 - 239
Target Start/End: Complemental strand, 25650941 - 25650886
Alignment:
Q  184 tatcaaaccgcaatccagagaatttaatgccaaagatcatgcattcattccaattt 239  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25650941 tatcaaaccgcaatccagggaatttaatgccaaagatcatgcattcattccaattt 25650886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 160
Target Start/End: Complemental strand, 21826345 - 21826237
Alignment:
Q  54 aataacatttattatcttattttgcaaaaat--cacgtattttattatttgcatattcaccccatcttaaattaatgattttttacaatttaaaccatca 151  Q
    ||||| ||||||||| ||||||| ||| | |  || ||||||||||||||||||||||||||||| |||||||||||   |||||||||||||| |||||    
T  21826345 aataaaatttattattttattttacaatattagcatgtattttattatttgcatattcaccccattttaaattaatgtcattttacaatttaaatcatca 21826246  T
Q  152 caataatta 160  Q
     | ||||||    
T  21826245 aattaatta 21826237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 8026734 - 8026770
Alignment:
Q  203 gaatttaatgccaaagatcatgcattcattccaattt 239  Q
    ||||||||||||||||||||||||||||||| |||||    
T  8026734 gaatttaatgccaaagatcatgcattcattcaaattt 8026770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0265 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0265
Description:

Target: scaffold0265; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 54 - 160
Target Start/End: Original strand, 6439 - 6547
Alignment:
Q  54 aataacatttattatcttattttgcaaaaat--cacgtattttattatttgcatattcaccccatcttaaattaatgattttttacaatttaaaccatca 151  Q
    ||||| ||||||||| ||||||| ||| | |  || ||||||||||||||||||||||||||||| |||||||||||   |||||||||||||| |||||    
T  6439 aataaaatttattattttattttacaatattagcatgtattttattatttgcatattcaccccattttaaattaatgtcattttacaatttaaatcatca 6538  T
Q  152 caataatta 160  Q
     | ||||||    
T  6539 aattaatta 6547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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