View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8013_low_6 (Length: 277)

Name: NF8013_low_6
Description: NF8013
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8013_low_6
NF8013_low_6
[»] chr2 (7 HSPs)
chr2 (15-259)||(42152588-42152834)
chr2 (153-245)||(34756625-34756720)
chr2 (145-259)||(4570540-4570657)
chr2 (211-258)||(16221063-16221110)
chr2 (201-247)||(28816688-28816734)
chr2 (153-246)||(2475768-2475864)
chr2 (219-256)||(8691124-8691161)
[»] chr6 (2 HSPs)
chr6 (145-259)||(5582413-5582530)
chr6 (153-244)||(2960630-2960724)
[»] chr1 (13 HSPs)
chr1 (150-246)||(6802174-6802273)
chr1 (145-259)||(33169343-33169460)
chr1 (145-247)||(37574870-37574975)
chr1 (145-247)||(11647077-11647182)
chr1 (145-259)||(26686487-26686604)
chr1 (153-259)||(49898360-49898469)
chr1 (145-246)||(44238933-44239037)
chr1 (188-259)||(16640347-16640421)
chr1 (168-246)||(4642144-4642225)
chr1 (153-243)||(4773952-4774045)
chr1 (201-247)||(9527041-9527087)
chr1 (215-259)||(3216129-3216173)
chr1 (215-247)||(16418574-16418606)
[»] chr5 (14 HSPs)
chr5 (145-259)||(39605888-39606005)
chr5 (145-245)||(13694772-13694875)
chr5 (153-246)||(42989478-42989575)
chr5 (145-245)||(9738309-9738412)
chr5 (145-245)||(13694987-13695090)
chr5 (145-245)||(37779601-37779704)
chr5 (153-245)||(16567736-16567831)
chr5 (145-245)||(43228718-43228821)
chr5 (185-247)||(7159663-7159728)
chr5 (145-246)||(15503853-15503957)
chr5 (165-245)||(16667569-16667652)
chr5 (145-217)||(37607392-37607467)
chr5 (208-259)||(6900776-6900827)
chr5 (153-245)||(32953743-32953838)
[»] chr8 (6 HSPs)
chr8 (154-241)||(12478081-12478171)
chr8 (153-245)||(8968275-8968370)
chr8 (153-245)||(21138133-21138228)
chr8 (153-246)||(34282971-34283067)
chr8 (153-246)||(38214704-38214800)
chr8 (145-246)||(27321924-27322028)
[»] chr3 (8 HSPs)
chr3 (153-259)||(41199951-41200060)
chr3 (145-234)||(38239396-38239488)
chr3 (170-246)||(47511718-47511796)
chr3 (146-247)||(54845994-54846098)
chr3 (145-245)||(41358702-41358805)
chr3 (153-245)||(41218458-41218553)
chr3 (201-259)||(43700215-43700273)
chr3 (201-246)||(33179198-33179243)
[»] chr4 (6 HSPs)
chr4 (145-259)||(6017053-6017171)
chr4 (153-243)||(50383834-50383927)
chr4 (145-222)||(49744977-49745057)
chr4 (153-245)||(15034548-15034643)
chr4 (145-245)||(31929118-31929221)
chr4 (145-200)||(52373676-52373731)
[»] chr7 (4 HSPs)
chr7 (153-245)||(5991492-5991587)
chr7 (145-245)||(41759695-41759798)
chr7 (155-259)||(41862380-41862487)
chr7 (154-246)||(815059-815154)
[»] scaffold0108 (1 HSPs)
scaffold0108 (154-247)||(21073-21167)
[»] scaffold0638 (1 HSPs)
scaffold0638 (153-245)||(4044-4139)


Alignment Details
Target: chr2 (Bit Score: 189; Significance: 1e-102; HSPs: 7)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 15 - 259
Target Start/End: Complemental strand, 42152834 - 42152588
Alignment:
Q  15 aatattttctgatataagagcagatagattatgatagtttatatactataattggaaaggtagttatgatannnnnnnacttactggataagtgtcaaaa 114  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||       ||||||||||||||||||||||    
T  42152834 aatattttctgatataagatcagatagattatgatagtttatatactataattggaaaggtagttatgatatttttttacttactggataagtgtcaaaa 42152735  T
Q  115 ataatatccataaattcagatgtgtctcaccggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagc 211  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||   |||| ||||||    
T  42152734 ataatatccataaattcagatgtgtctcaccggaacca-ccccagctagtctgggcactagtccaggttcagcttctactttctttgtagcaaatccagc 42152636  T
Q  212 cattactagaacctctcgcttttcctgcggattttgccaaggatttag 259  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||    
T  42152635 cattattagaacctctcgcttttcctgcggattttgccaaggatttag 42152588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 34756625 - 34756720
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcggattt 245  Q
    ||||||||||| ||||||||||| ||||| ||| ||||||||||||||   |||||||| ||| ||||||||||||||| ||||||||||||||||    
T  34756625 cccccagctagcctgggcactagcccaggctcagcttctactttctttgtagcaagtccggccgttactagaacctctcacttttcctgcggattt 34756720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 4570657 - 4570540
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttctttgca---agtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| ||||||||||||||  |||||||||| ||||| | | ||||||||||||||| |   || |||||||||||||||| || ||||||| |||||||    
T  4570657 cggagccacccccagctagcatgggcactagcccaggctgagcttctactttctttgtagtaagcccagccattactagaaactttcgctttacctgcgg 4570558  T
Q  242 attttgccaaggatttag 259  Q
    ||||||| ||||||||||    
T  4570557 attttgctaaggatttag 4570540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 211 - 258
Target Start/End: Complemental strand, 16221110 - 16221063
Alignment:
Q  211 ccattactagaacctctcgcttttcctgcggattttgccaaggattta 258  Q
    ||||||||||||| ||| |||||||||||||||||||| |||||||||    
T  16221110 ccattactagaacttcttgcttttcctgcggattttgctaaggattta 16221063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 28816688 - 28816734
Alignment:
Q  201 gcaagtccagccattactagaacctctcgcttttcctgcggattttg 247  Q
    |||||||||||||||| |||||||||| |||||| ||||||||||||    
T  28816688 gcaagtccagccattattagaacctcttgctttttctgcggattttg 28816734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 2475768 - 2475864
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcggatttt 246  Q
    |||||||||||| |||||||||||||||  ||| || | |||||||||   | ||| ||||||||||||||||| | | |||| || ||||||||||    
T  2475768 cccccagctagtttgggcactagtccagactcagctccaactttctttgtaggaagcccagccattactagaacttttagcttgtcttgcggatttt 2475864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 219 - 256
Target Start/End: Original strand, 8691124 - 8691161
Alignment:
Q  219 agaacctctcgcttttcctgcggattttgccaaggatt 256  Q
    |||| |||||| ||||||||||||||||||||||||||    
T  8691124 agaaactctcgattttcctgcggattttgccaaggatt 8691161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 72; Significance: 8e-33; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 5582413 - 5582530
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| |||||||||||||| ||||||||||| ||||| |||||||||||||||||||   ||||  |||| |||||||||||||||||||||||||||||    
T  5582413 cggagccacccccagctagcctgggcactagcccaggctcaacttctactttctttgtagcaagcacagctattactagaacctctcgcttttcctgcgg 5582512  T
Q  242 attttgccaaggatttag 259  Q
    ||||||||| ||||||||    
T  5582513 attttgccagggatttag 5582530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 2960630 - 2960724
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggatt 244  Q
    |||||| || ||||||| ||||| ||||| ||| || | | ||||||||   |||||||||||| ||||||||| | | ||||||||||||||||    
T  2960630 cccccaacttgtctgggtactagcccaggctcagctccaattttctttgtagcaagtccagccaatactagaacttttagcttttcctgcggatt 2960724  T

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Target: chr1 (Bit Score: 62; Significance: 8e-27; HSPs: 13)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 6802273 - 6802174
Alignment:
Q  150 ccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcggatttt 246  Q
    |||||||||||||| ||||||||||| ||||| ||||||||||||||||||   |||||  |||||||||||||||| ||||||||||||||||||||||    
T  6802273 ccacccccagctagcctgggcactagcccaggctcaacttctactttctttgtagcaagctcagccattactagaacttctcgcttttcctgcggatttt 6802174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 33169460 - 33169343
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| ||||||| |||||| || |||||||  ||| | ||| |||||||||| ||||   |||| ||| ||||||||| |||||||||||||||||||||    
T  33169460 cggagccacccctagctagcctaggcactaacccaagctcagcttctactttttttgtaacaagcccaaccattactataacctctcgcttttcctgcgg 33169361  T
Q  242 attttgccaaggatttag 259  Q
    ||||||||||||||||||    
T  33169360 attttgccaaggatttag 33169343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 37574870 - 37574975
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| ||||||||| ||||||||| |||||||||||  ||||||||||||||||||   ||||||  ||||||||||||||||||||| |||| ||| ||    
T  37574870 cggagccacccccacctagtctggacactagtccagactcaacttctactttctttatagcaagtatagccattactagaacctctcgttttttctgtgg 37574969  T
Q  242 attttg 247  Q
    ||||||    
T  37574970 attttg 37574975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 11647077 - 11647182
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| |||||||||||||| ||| ||||||  | ||  |||||||||||||||||||   |||| | ||||||||| |||||||||||||||||||||||    
T  11647077 cggagccacccccagctagcctgagcactatccgagactcaacttctactttctttgtagcaagccaagccattacaagaacctctcgcttttcctgcgg 11647176  T
Q  242 attttg 247  Q
    ||||||    
T  11647177 attttg 11647182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 26686604 - 26686487
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| ||||||||||||| | |||||||||||||||  ||| |||||||||| ||||   |||  || | ||||||||||| |||||| |||||||||||    
T  26686604 cggagccacccccagctaatatgggcactagtccagactcagcttctactttttttgtagcaaacccggtcattactagaatctctcgtttttcctgcgg 26686505  T
Q  242 attttgccaaggatttag 259  Q
    | ||||||||||||||||    
T  26686504 actttgccaaggatttag 26686487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 259
Target Start/End: Original strand, 49898360 - 49898469
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattttgcc 249  Q
    ||||||||||| ||||||||||| ||||| ||| || | ||||||||||   ||||| |||||||||||||||  | | ||||||||||| |||||||||    
T  49898360 cccccagctagcctgggcactagcccaggctcagctccaactttctttgtaacaagttcagccattactagaagttttagcttttcctgcagattttgcc 49898459  T
Q  250 aaggatttag 259  Q
    ||||||||||    
T  49898460 aaggatttag 49898469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 44239037 - 44238933
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| |||||||||||||||||||||||||| ||||| ||| || | |||||||||   | ||| ||||||||||||||||  | | ||||||| |||||    
T  44239037 cggagccacccccagctagtctgggcactagcccaggctcagctccaactttctttgtagaaagcccagccattactagaaattttagcttttcttgcgg 44238938  T
Q  242 atttt 246  Q
    |||||    
T  44238937 atttt 44238933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 259
Target Start/End: Complemental strand, 16640421 - 16640347
Alignment:
Q  188 ttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattttgccaaggatttag 259  Q
    ||||||||||||||   |||| ||| ||||||| |||| ||||||||||||||||| ||||||||| ||||||||    
T  16640421 ttctactttctttgtagcaagaccaaccattacaagaatctctcgcttttcctgcgaattttgccatggatttag 16640347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 4642225 - 4642144
Alignment:
Q  168 ggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggatttt 246  Q
    |||||||||||||| ||| || | ||||||||||   ||||| |||||||||||||||| | | ||||||||||||||||||    
T  4642225 ggcactagtccaggctcagctccgactttctttgtagcaagttcagccattactagaacttttagcttttcctgcggatttt 4642144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 4773952 - 4774045
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggat 243  Q
    ||||||||||| ||||||||||| ||||  |||||| | | ||| ||||   |||| ||||||||||||||||| | | |||||||||||||||    
T  4773952 cccccagctagcctgggcactagcccagactcaactccaattttttttgtagcaagcccagccattactagaacttttagcttttcctgcggat 4774045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 9527041 - 9527087
Alignment:
Q  201 gcaagtccagccattactagaacctctcgcttttcctgcggattttg 247  Q
    ||||| ||||||||||||||||| | | |||||||||||||||||||    
T  9527041 gcaagcccagccattactagaacttttagcttttcctgcggattttg 9527087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 259
Target Start/End: Complemental strand, 3216173 - 3216129
Alignment:
Q  215 tactagaacctctcgcttttcctgcggattttgccaaggatttag 259  Q
    ||||| || |||||| ||||||||||||||||||||| |||||||    
T  3216173 tactacaaactctcgattttcctgcggattttgccaaagatttag 3216129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 215 - 247
Target Start/End: Complemental strand, 16418606 - 16418574
Alignment:
Q  215 tactagaacctctcgcttttcctgcggattttg 247  Q
    ||||||||||||||| |||||||||||||||||    
T  16418606 tactagaacctctcgattttcctgcggattttg 16418574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 56; Significance: 3e-23; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 259
Target Start/End: Complemental strand, 39606005 - 39605888
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| |||||||||||||| ||| ||||||| ||||  ||| |||||||||||||||   |||||||| |||||| |||||||||| |||||| |||| |    
T  39606005 cggagccacccccagctagcctgagcactagcccagactcagcttctactttctttgtaacaagtccatccattattagaacctcttgctttttctgcag 39605906  T
Q  242 attttgccaaggatttag 259  Q
    ||||||||||||||||||    
T  39605905 attttgccaaggatttag 39605888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 13694772 - 13694875
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| |||||||||||||| ||||||||||| ||||| |||||||| |||||||||   ||||| ||| ||||||||||||| |||||||||||||| ||    
T  13694772 cggagccacccccagctagcctgggcactagcccaggctcaacttcaactttctttgtagcaagcccatccattactagaacttctcgcttttcctgtgg 13694871  T
Q  242 attt 245  Q
    ||||    
T  13694872 attt 13694875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 42989478 - 42989575
Alignment:
Q  153 cccccagctagtctggg-cactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggatttt 246  Q
    ||||||||||| ||||| |||||| ||||| ||| |||||||||||||||   |||| ||||||||||||||||| |||||||||| ||||| |||||    
T  42989478 cccccagctagcctggggcactagcccaggatcagcttctactttctttgaggcaagcccagccattactagaacttctcgctttttctgcgaatttt 42989575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 9738309 - 9738412
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| ||||||||||||||| || ||||||| || |  ||| |||||||||||||||   |||| ||| ||||||||||||| |||||| ||||||||||    
T  9738309 cggagccacccccagctagtttgtgcactagccctgactcagcttctactttctttgaagcaagcccaaccattactagaacttctcgcatttcctgcgg 9738408  T
Q  242 attt 245  Q
    ||||    
T  9738409 attt 9738412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 13694987 - 13695090
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| ||||||| |||||| |||||||||||  |||| ||| |||| ||||||||||   ||||| || ||||||||||||| |||||||||||||| ||    
T  13694987 cggagccacccctagctagcctgggcactagctcaggctcagcttcaactttctttgtagcaagttcatccattactagaacttctcgcttttcctgtgg 13695086  T
Q  242 attt 245  Q
    ||||    
T  13695087 attt 13695090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 145 - 245
Target Start/End: Original strand, 37779601 - 37779704
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| |||||||||||||| ||||||||||||||||| |||||| | | |||||||   |||||| |||||||||||||||| | | | |||| ||||||    
T  37779601 cggagccacccccagctagcctgggcactagtccaggctcaactccaattttctttgtagcaagttcagccattactagaacttttagttttttctgcgg 37779700  T
Q  242 attt 245  Q
    ||||    
T  37779701 attt 37779704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 16567736 - 16567831
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattt 245  Q
    ||||||||||| ||||||||||| ||||| ||| || | | ||||||||   |||||||||||||||||||||| | | ||||||| |||||||||    
T  16567736 cccccagctagcctgggcactagcccaggctcagctccaattttctttgtagcaagtccagccattactagaacttttagcttttcttgcggattt 16567831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 43228821 - 43228718
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| |||||||||||||| ||||||||||| | ||| |||||| | | ||||||||   |||| ||||||||||||||||| | | ||||||||| |||    
T  43228821 cggagccacccccagctagcctgggcactagccaaggctcaactccaattttctttgtagcaagcccagccattactagaacttttagcttttcctacgg 43228722  T
Q  242 attt 245  Q
    ||||    
T  43228721 attt 43228718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 185 - 247
Target Start/End: Complemental strand, 7159728 - 7159663
Alignment:
Q  185 aacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattttg 247  Q
    |||||||||||||||||   ||||  |||||||||||||||||||||||||||||||  |||||||    
T  7159728 aacttctactttctttgtagcaagctcagccattactagaacctctcgcttttcctgttgattttg 7159663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 246
Target Start/End: Original strand, 15503853 - 15503957
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| ||||||| |||||||||||||||||| ||||| ||| |||| | |||||||   ||||| | | ||||||||||||  | | |||||||||||||    
T  15503853 cggagccaccccaagctagtctgggcactagcccaggctcaccttcaaatttctttgtagcaagcctaaccattactagaatttttagcttttcctgcgg 15503952  T
Q  242 atttt 246  Q
    |||||    
T  15503953 atttt 15503957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 245
Target Start/End: Complemental strand, 16667652 - 16667569
Alignment:
Q  165 ctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattt 245  Q
    ||||||||||| ||||  ||| || | ||||||||||   |||||||||||||||||||||| | | |||||||||||||||||    
T  16667652 ctgggcactagcccagactcagctccaactttctttgtagcaagtccagccattactagaacttttagcttttcctgcggattt 16667569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 217
Target Start/End: Original strand, 37607392 - 37607467
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattac 217  Q
    |||| |||||||||||||| ||||||||||||||||| |||||| | | |||||||   |||||| ||||||||||    
T  37607392 cggagccacccccagctagcctgggcactagtccaggctcaactccaattttctttgtagcaagttcagccattac 37607467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 208 - 259
Target Start/End: Original strand, 6900776 - 6900827
Alignment:
Q  208 cagccattactagaacctctcgcttttcctgcggattttgccaaggatttag 259  Q
    |||||||||||||||| | | ||||||||||| ||||||| |||||||||||    
T  6900776 cagccattactagaacttttagcttttcctgcagattttgtcaaggatttag 6900827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 32953838 - 32953743
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattt 245  Q
    ||||||||||| ||||||||||| | ||| ||| || | | ||||||||   |||| ||||||||||||||||| | | ||||||||| |||||||    
T  32953838 cccccagctagcctgggcactagccgaggctcagctccaattttctttgtagcaagcccagccattactagaacttttagcttttcctacggattt 32953743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 154 - 241
Target Start/End: Original strand, 12478081 - 12478171
Alignment:
Q  154 ccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||||||||| ||||||||||| ||||| ||||||||||||||||||   ||||||||| | ||| |||||||||||| ||||||||||||    
T  12478081 ccccagctagcctgggcactagcccaggatcaacttctactttctttgtagcaagtccatctattgctagaacctctctcttttcctgcgg 12478171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 8968275 - 8968370
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattt 245  Q
    ||||||||||| || |||||||| ||||  ||| ||||||||| |||||   |||||||||||||||||||||||| || ||||| ||||||||||    
T  8968275 cccccagctagcctaggcactagcccagactcagcttctacttcctttgtagcaagtccagccattactagaacctatcactttttctgcggattt 8968370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 21138228 - 21138133
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattt 245  Q
    |||||||||||  | |||| ||||||||| ||| |||||||||||||||   |||| | | ||||||||||||||||| |||||||||||||||||    
T  21138228 cccccagctagcataggcattagtccaggctcagcttctactttctttgtagcaagcctaaccattactagaacctcttgcttttcctgcggattt 21138133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 246
Target Start/End: Complemental strand, 34283067 - 34282971
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggatttt 246  Q
    ||||||||||| ||||||||||| ||||| ||| || | ||||||||||   ||||||||| |||||||||||| | | ||||||| ||||||||||    
T  34283067 cccccagctagcctgggcactagcccaggctcagctccaactttctttgtagcaagtccagtcattactagaacttttagcttttcttgcggatttt 34282971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 246
Target Start/End: Original strand, 38214704 - 38214800
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggatttt 246  Q
    ||||||||||| ||||||||||| || || ||| || | | ||||||||   |||||||||||| ||||||||| | | ||||||||||||||||||    
T  38214704 cccccagctagcctgggcactagcccgggctcagctccaattttctttgtagcaagtccagccaatactagaacttttagcttttcctgcggatttt 38214800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 27322028 - 27321924
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| |||||||||||||| ||||||||| | ||||| ||| || | | ||||||||   |||| ||||||||||||| ||| | | | |||||||||||    
T  27322028 cggagccacccccagctagcctgggcacttgcccaggctcagctccaattttctttgtagcaagcccagccattactaaaacttttagtttttcctgcgg 27321929  T
Q  242 atttt 246  Q
    |||||    
T  27321928 atttt 27321924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 259
Target Start/End: Complemental strand, 41200060 - 41199951
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttgca---agtccagccattactagaacctctcgcttttcctgcggattttgcc 249  Q
    ||||||| ||| ||| ||||||| ||||| ||| |||||||||| |||| |   || ||||| |||||||||||||||  ||||||||||||||||||||    
T  41200060 cccccagttagcctgagcactagcccaggctcagcttctactttttttgtagtaagcccagcaattactagaacctctgccttttcctgcggattttgcc 41199961  T
Q  250 aaggatttag 259  Q
    ||||||||||    
T  41199960 aaggatttag 41199951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 38239396 - 38239488
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgctttt 234  Q
    |||| |||||||||||||  ||||||||| ||||||| ||||||| |||| |||||   |||||| |||||||||||| ||||||||||||||    
T  38239396 cggagccacccccagctaacctgggcactcgtccaggctcaacttttactatctttgtagcaagttcagccattactataacctctcgctttt 38239488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 170 - 246
Target Start/End: Complemental strand, 47511796 - 47511718
Alignment:
Q  170 cactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggatttt 246  Q
    ||||||||||| | || |||||| ||||||||   |||||||||||||||||||||||| ||||||||||||||||||||    
T  47511796 cactagtccagct-cagcttctaatttctttgtaacaagtccagccattactagaacctttcgcttttcctgcggatttt 47511718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 146 - 247
Target Start/End: Original strand, 54845994 - 54846098
Alignment:
Q  146 ggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcgga 242  Q
    ||||||||||||||||||  ||| |||||| ||||  ||||||||||||||||||   |||||| || ||||||||  ||||| |||||||| ||| |||    
T  54845994 ggaaccacccccagctagcttggacactagcccagactcaacttctactttctttgtagcaagttcatccattacttaaacctttcgctttttctgtgga 54846093  T
Q  243 ttttg 247  Q
    |||||    
T  54846094 ttttg 54846098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 41358805 - 41358702
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| |||||||||||||| |||||| |||||||||  ||| ||||||||||||||   ||||   || |||||| |||||| ||||||||||||| |||    
T  41358805 cggagccacccccagctagcctgggcgctagtccagactcagcttctactttctttgtagcaaactcaaccattattagaacttctcgcttttcctacgg 41358706  T
Q  242 attt 245  Q
    ||||    
T  41358705 attt 41358702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 41218553 - 41218458
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattt 245  Q
    ||||||||||| ||| ||||||| ||||| ||| || | |||||| |||   |||| ||||||||||||||||| | | |||||||||||||||||    
T  41218553 cccccagctagcctgagcactagcccaggctcagctccgactttccttgtagcaagcccagccattactagaacttttagcttttcctgcggattt 41218458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 259
Target Start/End: Complemental strand, 43700273 - 43700215
Alignment:
Q  201 gcaagtccagccattactagaacctctcgcttttcctgcggattttgccaaggatttag 259  Q
    ||||| ||| ||||||||||||  | | ||||||||||| |||||||||||||||||||    
T  43700273 gcaagcccaaccattactagaatttttagcttttcctgcagattttgccaaggatttag 43700215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 201 - 246
Target Start/End: Complemental strand, 33179243 - 33179198
Alignment:
Q  201 gcaagtccagccattactagaacctctcgcttttcctgcggatttt 246  Q
    ||||||||||||||||||||||| | | |||||||||||| |||||    
T  33179243 gcaagtccagccattactagaacttttagcttttcctgcgaatttt 33179198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 45; Significance: 1e-16; HSPs: 6)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 259
Target Start/End: Original strand, 6017053 - 6017171
Alignment:
Q  145 cggaaccaccccc-agctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcg 240  Q
    |||| |||||||| ||||||  |||||||||| ||||| |||||||||||||||||||   |||| ||  | ||||||||||| | |||||||| |||||    
T  6017053 cggagccaccccctagctagcatgggcactagcccaggctcaacttctactttctttgtagcaagcccgactattactagaacttgtcgctttttctgcg 6017152  T
Q  241 gattttgccaaggatttag 259  Q
    |||||||||| ||||||||    
T  6017153 gattttgccatggatttag 6017171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 243
Target Start/End: Original strand, 50383834 - 50383927
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggat 243  Q
    ||||||||||| ||||||||| | ||||| ||| || | ||||||||||   |||| ||||||||||||||||| | | |||||||||||||||    
T  50383834 cccccagctagcctgggcactggcccaggctcagctccaactttctttgtagcaagcccagccattactagaacttttagcttttcctgcggat 50383927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 145 - 222
Target Start/End: Original strand, 49744977 - 49745057
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaa 222  Q
    |||| ||| |||||||||||||||||||||||||||| ||| || | |||||||||    |||||| ||||||||||||||    
T  49744977 cggagccaaccccagctagtctgggcactagtccaggctcagctccaactttctttataacaagtctagccattactagaa 49745057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 15034643 - 15034548
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattt 245  Q
    |||||| |||| ||||||||||| ||| | ||| |||| ||||||||||   |||| ||| ||||||||||||| | ||||||||||||| |||||    
T  15034643 cccccaactagcctgggcactagcccaagctcagcttcaactttctttgtaacaagcccaaccattactagaacttttcgcttttcctgcagattt 15034548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 31929221 - 31929118
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    ||||||||||||||||||| |||||| |||| | ||  | | ||| |||||||||||   |||| |||  ||||||||||| | ||||||||||||||||    
T  31929221 cggaaccacccccagctagcctgggcgctagccaagacttagcttttactttctttgtagcaagcccaatcattactagaatccctcgcttttcctgcgg 31929122  T
Q  242 attt 245  Q
    ||||    
T  31929121 attt 31929118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 145 - 200
Target Start/End: Original strand, 52373676 - 52373731
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt 200  Q
    |||| |||||||||||||||||||||||||| ||||| ||| || | |||||||||    
T  52373676 cggagccacccccagctagtctgggcactagcccaggctcagctccaactttcttt 52373731  T

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Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 4)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 245
Target Start/End: Complemental strand, 5991587 - 5991492
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattt 245  Q
    ||||||||||| ||||||||||| ||||| |||||| | | ||||||||   |||| ||||||||||||||||| | | | |||||||||||||||    
T  5991587 cccccagctagcctgggcactagcccaggctcaactccaattttctttgtagcaagcccagccattactagaacttttagtttttcctgcggattt 5991492  T

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Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 245
Target Start/End: Complemental strand, 41759798 - 41759695
Alignment:
Q  145 cggaaccacccccagctagtctgggcactagtccaggttcaacttctactttcttt---gcaagtccagccattactagaacctctcgcttttcctgcgg 241  Q
    |||| |||||||||||||| ||||||||||| ||||| ||| || | |||||||||   ||||| ||||||||||||||||| | | ||||||| ||| |    
T  41759798 cggagccacccccagctagcctgggcactagcccaggctcagctccaactttctttgtagcaagcccagccattactagaacttttagcttttcttgcag 41759699  T
Q  242 attt 245  Q
    ||||    
T  41759698 attt 41759695  T

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Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 259
Target Start/End: Complemental strand, 41862487 - 41862380
Alignment:
Q  155 cccagctagtctgggcactagtccaggttcaacttctactttctttgca---agtccagccattactagaacctctcgcttttcctgcggattttgccaa 251  Q
    ||||||||||||||||||||| |||   ||| || ||||||||||||||   | | ||||||||||||| | |||| | |||| || |||||||||||||    
T  41862487 cccagctagtctgggcactagcccatactcagctcctactttctttgcagcaaattcagccattactagtatctcttgttttttctacggattttgccaa 41862388  T
Q  252 ggatttag 259  Q
    ||||||||    
T  41862387 ggatttag 41862380  T

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Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 154 - 246
Target Start/End: Complemental strand, 815154 - 815059
Alignment:
Q  154 ccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggatttt 246  Q
    |||||| ||| ||||||||||| ||||| ||| || | ||||||||||   ||| || ||||||||||||||| | | ||||||||| ||||||||    
T  815154 ccccagttagcctgggcactagcccaggctcagctccaactttctttgtagcaaatctagccattactagaacttttagcttttcctacggatttt 815059  T

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Target: scaffold0108 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0108
Description:

Target: scaffold0108; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 247
Target Start/End: Complemental strand, 21167 - 21073
Alignment:
Q  154 ccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattttg 247  Q
    |||||||||| ||||||||||| ||||| ||| |||| ||||||||||   |||| ||||||||||||  ||| | || ||||||||||||||||||    
T  21167 ccccagctagcctgggcactagcccaggctcagcttcaactttctttgttacaagcccagccattact--aacttttcacttttcctgcggattttg 21073  T

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Target: scaffold0638 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 153 - 245
Target Start/End: Original strand, 4044 - 4139
Alignment:
Q  153 cccccagctagtctgggcactagtccaggttcaacttctactttctttg---caagtccagccattactagaacctctcgcttttcctgcggattt 245  Q
    ||||||| ||| ||||||||||| ||||| ||| || | | ||||||||   |||| ||||||||||||||||| | | |||||||||||| ||||    
T  4044 cccccagttagcctgggcactagcccaggctcagctccaattttctttgtagcaagcccagccattactagaacttttagcttttcctgcgaattt 4139  T

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