View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8015_high_1 (Length: 299)
Name: NF8015_high_1
Description: NF8015
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8015_high_1 |
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Alignment Details
Target: chr4 (Bit Score: 265; Significance: 1e-148; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 265; E-Value: 1e-148
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 38390258 - 38389978
Alignment:
| Q |
1 |
tctgataactaagaagaaattcgaaaatgaagcttgacgtagatgttttgagatacctctctaaagatgattttagggttctcaccgccgttgaattggg |
100 |
Q |
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||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38390258 |
tctgataactacgataaaattcgaaaatgaagcttgacgtagatgttttgagatacctctctaaagatgattttagggttctcaccgccgttgaattggg |
38390159 |
T |
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| Q |
101 |
catgagaaaccacgaaattgtccctgctgaactcatcgaccgaattgctcgtctcaaacatggtggcacctacaaggttctgaaaaacttgcttaaatac |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
38390158 |
catgagaaaccacgaaattgtccctgctgaactcatcgaccgaattgctcgtctcaaacatggtggcacctacaaggttctgaaaaacttgcttaaacac |
38390059 |
T |
|
| Q |
201 |
aagctgttgcatcatgactctactaaatacgatggcttccgccttacctaccttggttatgattttcttgccatcaaaact |
281 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38390058 |
aagctgttgcatcatgactctactaaatacgatggcttccgccttacctaccttggttatgattttcttgccatcaaaact |
38389978 |
T |
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