View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8019_high_18 (Length: 270)
Name: NF8019_high_18
Description: NF8019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8019_high_18 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 163; Significance: 4e-87; HSPs: 3)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 4581558 - 4581336
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4581558 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
4581459 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4581458 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa |
4581359 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
4581358 |
attttgcataaaatagctacagc |
4581336 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 149; E-Value: 9e-79
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 518926 - 519145
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
518926 |
cacagttaattcacctatccatgtcttgt---gtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
519022 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
519023 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa |
519122 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
519123 |
attttgcataaaatagctacagc |
519145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 45296920 - 45297146
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
45296920 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccaaatttttttttcactacacaaccttactattatcggattagctgaatataact |
45297019 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagtttt----nnnnnnnnnnnntaatttaccatgagaacagaaatatacaaa |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
45297020 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaaaaaaaaaaaaaatttaccatgagaacagaaatatacaaa |
45297119 |
T |
|
| Q |
226 |
taaaattttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
45297120 |
taaaattttgcataaaatagctacagc |
45297146 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 163; Significance: 4e-87; HSPs: 3)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 670160 - 670382
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
670160 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
670259 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
670260 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa |
670359 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
670360 |
attttgcataaaatagctacagc |
670382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 10642956 - 10643178
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
10642956 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
10643055 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
10643056 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa |
10643155 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
10643156 |
attttgcataaaatagctacagc |
10643178 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 2850853 - 2850631
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2850853 |
cacagttaattcacctatccatgttttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
2850754 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2850753 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa |
2850654 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
2850653 |
attttgcataaaatagctacagc |
2850631 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 163; Significance: 4e-87; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 33048373 - 33048595
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
33048373 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
33048472 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
33048473 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa |
33048572 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
33048573 |
attttgcataaaatagctacagc |
33048595 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 30 - 67
Target Start/End: Complemental strand, 50901618 - 50901581
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaa |
67 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50901618 |
cacagttaattcacctatccatgtcttgttgtgtaaaa |
50901581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 163; Significance: 4e-87; HSPs: 2)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 9303346 - 9303568
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9303346 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
9303445 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
9303446 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa |
9303545 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
9303546 |
attttgcataaaatagctacagc |
9303568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 31 - 171
Target Start/End: Complemental strand, 12391283 - 12391143
Alignment:
| Q |
31 |
acagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataactc |
130 |
Q |
| |
|
|||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
12391283 |
acagttaattcacctatcaatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataactc |
12391184 |
T |
|
| Q |
131 |
gtaatcattgaatcaaattgaaaatgaaattcactaaaaac |
171 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
12391183 |
gtaatcattaaatcaaattgaaaatgaaattcactaaaaac |
12391143 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 159; Significance: 1e-84; HSPs: 3)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 2524391 - 2524613
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2524391 |
cacagttaattcgcctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
2524490 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
2524491 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa |
2524590 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
2524591 |
attttgcataaaatagctacagc |
2524613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 158; E-Value: 4e-84
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 30593175 - 30593389
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30593175 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
30593274 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
30593275 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagtttt--------aaaataatttaccatgagaacagaaatatacaaataaa |
30593366 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
30593367 |
attttgcataaaatagctacagc |
30593389 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 25086689 - 25086468
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
25086689 |
cacagttaattcacatatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
25086590 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
25086589 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagtttt-aaaaaaaaaaataatttaccatgagaacagaaatatacaaataaa |
25086491 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
25086490 |
attttgcataaaatagctacagc |
25086468 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 30 - 252
Target Start/End: Original strand, 50580216 - 50580438
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
50580216 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccaaaattttttttcactacacaaccttactattatcggattagctgaatataact |
50580315 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
50580316 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa |
50580415 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
50580416 |
attttgcataaaatagctacagc |
50580438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 157; Significance: 2e-83; HSPs: 2)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 30 - 250
Target Start/End: Complemental strand, 49318056 - 49317836
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
49318056 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
49317957 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
49317956 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa |
49317857 |
T |
|
| Q |
230 |
attttgcataaaatagctaca |
250 |
Q |
| |
|
| ||||||||||||||||||| |
|
|
| T |
49317856 |
actttgcataaaatagctaca |
49317836 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 36667704 - 36667482
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
36667704 |
cacaattaattcacctatccatgtcttgttgtgtaaaatcttgaccataattttttttcactacacaaccttactattatcggattagctgaatataact |
36667605 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
36667604 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaataaaataatttaccatgagaacagaaatatacaaataaa |
36667505 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
36667504 |
attttgcataaaatagctacagc |
36667482 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 151; Significance: 6e-80; HSPs: 2)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 30 - 252
Target Start/End: Complemental strand, 4598812 - 4598591
Alignment:
| Q |
30 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaannnnnnnncactacacaaccttactattatcggattagctgaatataact |
129 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4598812 |
cacagttaattcacctatccatgtcttgttgtgtaaaatcttgaccagaattttttttcactacacaaccttactattatcggattagctgaatataact |
4598713 |
T |
|
| Q |
130 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttnnnnnnnnnnnntaatttaccatgagaacagaaatatacaaataaa |
229 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
4598712 |
cgtaatcattgaatcaaattgaaaatgaaattcactaaaaacgcacatagttttaaaaaaaaaaaa-aatttaccatgagaacaaaaatatacaaataaa |
4598614 |
T |
|
| Q |
230 |
attttgcataaaatagctacagc |
252 |
Q |
| |
|
||||||||||||||||||||||| |
|
|
| T |
4598613 |
attttgcataaaatagctacagc |
4598591 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 93 - 251
Target Start/End: Complemental strand, 10990912 - 10990754
Alignment:
| Q |
93 |
cacaaccttactattatcggattagctgaatataactcgtaatcattgaatcaaattgaaaatgaaattcactaaaaac-gcacatagttttnnnnnnnn |
191 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
10990912 |
cacaaccttactattatcggattagctgaatataactcgtaatcattgaatcaaattgaaaatgaaattcactaaaaacggcacatagtttt-aaaaaat |
10990814 |
T |
|
| Q |
192 |
nnnntaatttaccatgagaacagaaatatacaaataaaattttgcataaaatagctacag |
251 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||| |
|
|
| T |
10990813 |
aaaataatttaccatgagaacagaaatatacaaatcaaaatttgcataaaatatctacag |
10990754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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