View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8019_high_20 (Length: 263)
Name: NF8019_high_20
Description: NF8019
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8019_high_20 |
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Alignment Details
Target: chr3 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 6 - 248
Target Start/End: Complemental strand, 50153175 - 50152933
Alignment:
| Q |
6 |
agaggaatagtgtaggcagcgagggcaaaacggacagaaggccataaattcattttctaatataaaaaacacagtatgttatcagaaacctcataaaaac |
105 |
Q |
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| T |
50153175 |
agaggaatagtgtaggcagcgagggcaaaacggacagaaggccataaattcattttgtaatataaaaaacacagtatgttaccagaaacctcgtaaaaac |
50153076 |
T |
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| Q |
106 |
aaagtatattaccagaaacttcatcaaagatatatagtcctactgtgtaagaagcaattaaggagaaaaaatctaagcaatgaggaagtagcaactgaat |
205 |
Q |
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| T |
50153075 |
aaagtatattaccagaaacttcatcaaagatatatagtcatactgtttaagaagcaattaaggagaaaaaatctaagcaatgaggaagtagcaactgaat |
50152976 |
T |
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| Q |
206 |
tatgttagggcaagaattctgagtcctttgcaatagaataaat |
248 |
Q |
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| T |
50152975 |
tatgttagggcaagaattttgagtcctttgcaatagaataaat |
50152933 |
T |
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